General Methods
All reactions were carried out under normal conditions, reagents and solvents were obtained commercially from Sigma-Aldrich, VWR, and Fisher and used directly without purifications. All reactions, unless otherwise noted, were carried out in oven-dried glassware under a nitrogen atmosphere. All purifications were conducted by flash chromatography using 230–400 mesh silica gel with a gradient of solvent systems. Thin-layer chromatography (TLC) analysis was performed with aluminum-backed TLC plates with UV and fluorescence indicator and visualized using UV lamp at 254 nm, then stained with PMA solution. 1H NMR and proton-decoupled 13C NMR spectra were obtained with Bruker 400 MHz NMR spectrometer in DMSO-d6, D2O, or CDCl3. The chemical shifts were reported using CDCl3/DMSO-d6 as internal standard at 7.26/2.50 ppm and at 77.0/39.5 ppm, respectively. 2D NMR experiments (HSQC, COSY) were also conducted to assist the compound characterizations. Melting point measurements were carried out using a Fisher Jones melting point apparatus. The molecular mass was measured using LC-MS on an Agilent LC1260 system and 6120B Single Quad Mass Spectrometer or with Shimadzu LCMS-2020. HRMS data were obtained using positive electrospray ionization on a Bruker 12T APEX-Qe FTICR-MS with an Apollo II ion source.
For compounds synthesized by similar methods, the procedures for the first compound are included in detail. For the rest, only the amount used, purification method, and the characterization data are provided.
Synthesis of compound 6a. Compound S3 (200.0 mg, 0.69 mmol, 1.0 equiv) was added to a 50 mL round bottomed flask (RBF) with a drying tube and nitrogen balloon, pyridine (4.0 mL) was added and the flask was cooled to 0 °C, then 4-bromobenzenesulfonyl chloride (352.1 mg, 1.37 mmol, 2.0 equiv) was added and the mixture was stirred at 0 °C for 20 min and the ice bath was removed. The mixture was stirred at rt for 20 h, at which time 1H NMR spectrum showed about 95% conversion. The reaction was stopped, and solvent was removed, the crude product was purified on silica gel using a gradient of dichloromethane (DCM) and methanol, from DCM up to 10% MeOH/DCM (Rf = 0.31 in 10% MeOH/DCM). The desired product 6a was obtained as a colorless liquid (232.0 mg, 66%). 1H NMR (400 MHz, CDCl3) δ 7.78 (d, J = 8.6 Hz, 2H), 7.69 (d, J = 8.6 Hz, 2H), 6.21 (d, J = 8.8 Hz, 1H), 4.78 (d, J = 3.6 Hz, 1H), 4.38–4.29 (m, 2H), 4.11–4.04 (m, 1H), 3.87–3.78 (m, 2H), 3.71–3.65 (m, 1H), 3.60–3.54 (m, 1H), 3.53–3.46 (m, 2H), 3.37–3.29 (m, 1H), 2.02 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 172.3, 134.8, 132.6, 129.5, 129.2, 97.7, 73.4, 70.5, 69.9, 69.7, 67.2, 53.2, 50.5, 23.2. HRMS m/z calcd for C16H21BrN4O8SNa [M + Na]+ 531.0156, found 531.0155.
Synthesis of compound 6b. Compound S3 (100.0 mg, 0.35 mmol), pyridine (1.5 mL), 4-chlorobenzene sulfonyl chloride (147.7 mg, 0.69 mmol), 12 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a colorless liquid (122.0 mg, 76%) as the desired compound. (Rf = 0.27 in 10% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.86 (d, J = 8.6 Hz, 2H), 7.53 (d, J = 8.6 Hz, 2H), 6.12 (d, J = 8.7 Hz, 1H), 4.79 (d, J = 3.6 Hz, 1H), 4.39–4.25 (m, 2H), 4.11–4.03 (m, 1H), 3.90–3.83 (m, 1H), 3.83–3.77 (m, 1H), 3.71–3.64 (m, 1H), 3.61–3.45 (m, 3H), 3.38–3.29 (m, 1H), 2.02 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 172.2, 140.6, 134.3, 129.6, 129.4, 97.7, 72.8, 70.3, 69.9, 69.8, 67.2, 53.2, 50.4, 23.1. LC-MS (ESI+) calcd for C16H22ClN4O8S [M+H]+ 465 found 465. HRMS (ESI+) ([M + Na]+) m/z calcd for C16H21ClN4O8SNa, 487.0661, found 487.0665.
Synthesis of compound 6d. Compound S3 (200.0 mg, 0.69 mmol), pyridine (4.0 mL), 1-naphthalenesulfonyl chloride (312.4 mg, 1.37 mmol), 20 h to see 90% conversion. Purified by flash chromatography (DCM to 10% MeOH/DCM) to obtain a white foam (211.0 mg, 64%) as the desired product. (Rf = 0.33 in 10% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 8.63 (d, J = 7.9 Hz, 1 H), 8.29 (dd, J = 8.4, 7.0 Hz, 1H), 8.13 (d, J = 8.2 Hz, 1H), 7.95 (d, J = 8.0 Hz, 1H), 7.74–7.55 (m, 3H), 5.92 (d, J = 8.3 Hz, 1H), 4.61 (d, J = 3.7 Hz, 1H), 4.40–4.31 (m, 1H), 4.28–4.20 (m, 1H), 3.98–3.89 (m, 1H), 3.90–3.67 (m, 2H), 3.64–3.54 (m, 1H), 3.49–3.34 (m, 3H), 3.27–3.18 (m, 1H), 2.01 (s, 3H); 13C NMR (400 MHz, CDCl3) δ 172.1, 135.3, 134.1, 131.1, 130.4, 128.8, 128.5, 128.4, 127.2, 125.0, 124.0, 97.4, 72.7, 70.4, 69.9, 69.8, 66.9, 53.1, 50.3, 23.1. HRMS m/z calcd for C20H24N4O8SNa [M + Na]+ 503.1207, found 503.1208.
Synthesis of compound 7a. Compound 6a (100.0 mg, 0.2 mmol, 1.0 equiv) was added to a 50 mL round bottom flask with a drying tube and nitrogen balloon attached, the reaction flask was cooled to 0 °C, then dichloromethane (2.5 mL), pyridine (5.0 equiv) and benzoyl chloride (0.06 mL, 0.5 mmol, 2.5 equiv) were added to the solution. The reaction mixture was stirred at to 0 °C and then stirred at rt for about 12 h. At this time, TLC and 1H NMR indicated full conversion to the product. The reaction was stopped, and solvent was removed under vacuum using a rotovap. The crude product was purified using flash chromatography on silica gel using a solvent gradient of ethyl acetate and hexane from 1:4 to 3:2 ratio. The desired product was obtained as a colorless viscous liquid (112.0 mg, 79% yield). (Rf = 0.38 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.90–7.83 (m, 4H), 7.70 (d, J = 8.5 Hz, 2H), 7.58 (d, J = 8.5 Hz, 2H), 7.55–7.47 (m, 2H), 7.39–7.32 (m, 4H), 5.90 (d, J = 9.1 Hz, 1H), 5.64 (t, J = 10.9 Hz, 1H), 5.38 (t, J = 9.9 Hz, 1H), 4.97 (d, J = 3.6 Hz, 1H), 4.56–4.49 (m, 1H), 4.28–4.16 (m, 3H), 4.00–3.94 (m, 1H), 3.72–3.65 (m, 1H), 3.62–3.55 (m, 1H), 3.45–3.38 (m, 1H), 1.85 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 170.1, 166.9, 165.1, 134.5, 133.7, 133.5, 132.5, 129.9, 129.8, 129.4, 129.3, 128.7, 128.5, 128.4, 97.6, 71.0, 68.8, 68.5, 68.4, 67.8, 52.0, 50.4, 23.0. HRMS m/z calcd for C30H29BrN4O10SNa [M + Na]+ 739.0680, found 739.0676.
Synthesis of compound 7b. Compound 6b (100.0 mg, 0.22 mmol), DCM (3.0 mL) and benzoyl chloride (0.06 mL, 0.54 mmol), 12 h. The crude was purified using flash chromatography on silica gel using a solvent gradient of DCM to 3% MeOH/DCM) to obtain brown oil (96.0 mg, 86%) as the desired product. (Rf = 0.32 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.96–7.87 (m, 4H), 7.53–7.45 (m, 2H), 7.40–7.30 (m, 4H), 5.96 (d, J = 9.3 Hz, 1H), 5.68 (t, J = 10.9 Hz, 1H), 5.47 (t, J = 9.9 Hz, 1H), 5.06 (d, J = 3.6 Hz, 1H), 4.65–4.55 (m, 1H), 4.26–4.18 (m, 1H), 4.12–4.03 (m, 1H), 3.78–3.71 (m, 1H), 3.71–3.63 (m, 2H), 3.63–3.56 (m, 1H), 3.48–3.39 (m, 1H), 1.86 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 170.1, 167.0, 165.2, 133.6, 133.5, 129.83, 129.81, 128.7, 128.6, 128.5, 128.4, 97.5, 71.2, 70.5, 70.3, 67.7, 52.1, 50.4, 43.6, 23.0. LC-HRMS m/z calcd for C24H25ClN4O7Na [M + Na]+ 539.1304, found 539.1301.
Synthesis of compound 8a. To a 50 mL RBF, 7a (100.0 mg, 0.14 mmol, 1.0 equiv) in t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL) and 10-undecynoic acid (33.1 mg, 0.18 mmol, 1.3 equiv), CuSO4·5H2O (7.0 mg, 0.028 mmol, 0.2 equiv) and sodium ascorbate (NaAsc) (11.1 mg, 0.056 mmol, 0.4 equiv) was added sequentially as described and stirred at rt for 16 h. The reaction was monitored after 16 h by 1H NMR to see the consumption of starting material and TLC to see no starting material at all. Further purified by flash chromatography using DCM to 2% MeOH/DCM to obtain a white foam (112.0 mg, 89%) as the desired product. (Rf = 0.26 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.88–7.79 (m, 4H), 7.68 (d, J = 8.6 Hz, 2H), 7.56 (d, J = 8.6 Hz, 2H), 7.53–7.44 (m, 3H), 7.38–7.30 (m, 4H), 6.15 (d, J = 9.0 Hz, 1H), 5.52 (t, J = 10.1 Hz, 1H), 5.32 (t, J = 9.8 Hz, 1H), 4.87 (d, J = 3.6 Hz, 1H), 4.60 (s, 2H), 4.53–4.44 (m, 1H), 4.20–4.06 (m, 3H), 4.02–3.94 (m, 1H), 3.92–3.84 (m, 1H), 2.70 (s, 2H), 2.30 (t, J = 7.3 Hz, 2H), 1.86 (s, 3H), 1.68–1.54 (m, 4H), 1.26 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 177.7, 170.6, 166.8, 165.0, 134.3, 133.6, 133.4, 132.5, 129.8, 129.7, 129.4, 129.2, 128.6, 128.5, 128.40, 128.37, 97.5, 71.1, 68.7, 68.4, 68.3, 66.6, 51.8, 49.6, 33.9, 29.2, 29.0, 28.91, 28.86, 25.5, 24.7, 22.9. HRMS m/z calcd for C41H47BrN4O12SNa [M + Na]+ 921.1990, found 921.1994.
Synthesis of compound 8b. Compound 7b (90.0 mg, 0.17 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 2.5 mL), 10-undecynoic acid (31.7 mg, 0.17 mmol), CuSO4·5H2O (6.7 mg, 0.02 mmol), NaAsc (10.6 mg, 0.05 mmol), 5 h. The crude was purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a colorless oil (68 mg, 56%) as the desired product. (Rf = 0.24 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.94–7.86 (m, 4H), 7.54–7.46 (m, 2H), 7.44 (s, 1H), 7.40–7.32 (m, 4H), 6.13 (d, J = 9.2 Hz, 1H), 5.58 (dd, J = 10.7, 9.6 Hz, 1H), 5.41 (t, J = 9.6 Hz, 1H), 4.96 (d, J = 3.6 Hz, 1H), 4.70–4.59 (m, 2H), 4.59–4.51 (m, 1H), 4.31–4.20 (m, 1H), 4.03–3.89 (m, 2H), 3.68–3.57 (m, 2H), 2.73 (t, J = 7.6 Hz, 2H), 2.33 (t, J = 7.3 Hz, 2H), 1.88 (s, 3H), 1.69–1.58 (m, 4H), 1.29 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 170.6, 167.0, 165.2, 133.6, 133.5, 129.9, 129.8, 128.73, 128.65, 128.5, 128.4, 97.5, 71.4, 70.5, 70.3, 66.6, 52.0, 49.5, 43.6, 29.2, 28.9, 28.8, 28.7, 25.6, 23.0. HRMS m/z calcd for C35H43ClN4O9Na [M + Na]+ 721.2611, found 721.2609.
Synthesis of compound 8c. Compound 7c (360.0 mg, 0.55 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 6.0 mL), 10-undecynoic acid (138.0 mg, 0.72 mmol), CuSO4·5H2O (18.0 mg, 0.108 mmol, 0.2 equiv), NaAsc (44.0 mg, 0.22 mmol), 12 h. Purified by flash chromatography (DCM to 5% MeOH/DCM) to afford the colorless a semi-solid (378.0 mg, 82%) as the desired product (Rf = 0.65 in 10% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.89–7.81 (m, 4H), 7.70 (d, J = 8.3 Hz, 2H), 7.55–7.43 (m, 3H), 7.40–7.30 (m, 4H), 7.21 (d, J = 8.1 Hz, 2H), 6.07 (d, J = 9.2 Hz, 1H), 5.54 (dd, J = 10.8, 9.6 Hz, 1H), 5.30 (t, J = 9.6 Hz, 1H), 4.86 (d, J = 3.6 Hz, 1H), 4.65–4.56 (m, 2H), 4.51–4.43 (m, 1H), 4.22–4.04 (m, 4H), 3.93–3.85 (m, 1H), 2.72 (t, J = 7.7 Hz, 2H), 2.36 (s, 3H), 2.32 (t, J = 7.4 Hz, 2H), 1.86 (s, 3H), 1.71–1.57 (m, 4H), 1.29 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 177.0, 170.5, 166.9, 165.1, 148.8, 145.0, 133.6, 133.4, 132.3, 130.0, 129.9, 129.81, 129.78, 128.7, 128.6, 128.4, 128.0, 121.3, 97.5, 71.3, 68.9, 68.7, 68.2, 66.7, 51.9, 49.5, 33.8, 29.3, 29.0, 28.84, 28.82, 25.6, 24.7, 23.0, 21.6; HRMS m/z calcd for C42H50N4O21SNa [M + Na]+ 857.3038, found 857.3039.
Synthesis of compound LM28 (13c). Compound 8c (100.0 mg, 0.12 mmol, 1.0 equiv), K2CO3 (33.0 mg, 0.24 mmol, 2.0 equiv) and DMF (14 mL) were added to a 50 mL RBF. The reaction mixture was stirred at 70 °C for 3 h, at which time 1H NMR spectrum and TLC indicated the full conversion of starting materials. The reaction was stopped and solvent was removed. The crude was purified via flash chromatography using an eluent of DCM to 5% MeOH/DCM to obtain the desired product as a white solid (65.0 mg, 82%), Rf = 0.29 in 5% MeOH/DCM), m.p. 196.0 °C-198.0 °C; 1H NMR (400 MHz, CDCl3) δ ppm 7.95–7.86 (m, 4H), 7.54–7.45 (m, 2H), 7.42 (s, 1H), 7.40–7.31 (m, 4H), 6.00 (d, J = 9.2 Hz, 1H), 5.62 (dd, J = 10.9, 9.7 Hz, 1H), 5.45 (t, J = 9.7 Hz, 1H), 4.77–4.69 (m, 1H), 4.66 (d, J = 3.5 Hz, 1H), 4.62–4.54 (m, 1H), 4.51–4.43 (m, 1H), 4.41–4.34 (m, 1H), 4.13–4.01 (m, 4H), 2.87–2.78 (m, 1H), 2.77–2.67 (m, 1H), 2.31–2.20 (m, 1H), 2.19–2.09 (m, 1H), 1.93 (s, 3H), 1.79–1.60 (m, 2H), 1.56–1.43 (m, 2H), 1.29–1.09 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 173.4, 170.2, 167.2, 165.4, 133.52, 133.47, 129.9, 129.8, 128.9, 128.8, 128.5, 128.4, 121.3, 97.7, 71.4, 70.2, 68.0, 65.0, 63.2, 52.6, 46.6, 33.7, 30.2, 28.20, 28.19, 28.1, 27.7, 27.2, 24.9, 24.4, 23.1; HRMS (ESI+) ([M + Na]+) m/z calcd for C35H42N4O9Na, 685.2844, found 685.2825.
Synthesis of compounds LM28 and DLM28. Compound 8a (100.0 mg, 0.11 mmol, 1.0 equiv), DMF (7.0 mL), and K2CO3 (30.7 mg, 0.22 mmol, 2.0 equiv) were added to a 50 mL RBF. The reaction mixture was stirred at 75 °C for 5 h, the 1H NMR and TLC samples showed complete conversion of the starting materials. The crude was purified by flash chromatography using DCM to 5% MeOH DCM to obtain the desired compound LM28 (53.0 mg, 0.080 mmol, 72%) along with some later fraction which was identified as the dimerization product DLM28 as a white solid (15.0 mg, 0.011 mmol, 20% based on starting material conversion). The chloro compound 8b was cyclized by similar conditions, using compound 8b (50.0 mg, 0.07 mmol, 1.0 equiv), DMF (7.0 mL), and K2CO3 (19.8 mg, 0.14 mmol, 2.0 equiv). The desired compound LM28 (31.7 mg, 0.048 mmol, 67%) and DLM28 (8.0 mg, 0.006 mmol, 17% based on starting material conversion) were obtained. Characterization for DLM28: Rf = 0.18 in 5% MeOH/DCM. m.p. 236.0–238.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.92–7.87 (m, 8H), 7.51–7.46 (m, 6H), 7.37–7.31 (m, 8H), 6.06 (d, J = 9.1 Hz, 2H), 5.58 (dd, J = 10.3, 9.5 Hz, 2H), 5.43 (t, J = 9.8 Hz, 2H), 4.89 (d, J = 3.5 Hz, 2H), 4.63–4.50 (m, 6H), 4.21–4.11 (m, 6H), 3.95–3.88 (m, 4H), 2.72 (t, J = 7.6 Hz, 4H), 2.27–2.22 (m, 4H), 1.89 (s, 6H), 1.70–1.66 (m, 4H), 1.59–1.54 (m, 4H), 1.33–1.23 (m, 16H); 13C NMR (100 MHz, CDCl3) δ 173.2, 170.3, 166.9, 165.2, 133.5, 133.4, 129.83, 129.77, 128.87, 128.85, 128.4, 121.3, 97.7, 71.4, 69.3, 68.6, 66.8, 62.6, 52.0, 49.5, 34.0, 29.2, 28.93, 28.88, 28.8, 25.6, 24.7, 23.1. HRMS m/z calcd for C70H84N8O18Na [M + Na]+ 1347.5796, found 1347.5797.
Synthesis of compound 10d. 3-azido propionic acid (200.0 mg, 1.74 mmol, 1.0 equiv) and 1,7-octadiyne (276.0 mg, 2.6 mmol, 1.5 equiv) were dissolved in t-BuOH: THF: H2O (v:v:v 1:1:1, 25.0 mL), then CuSO4·5H2O (84.8 mg, 0.34 mmol, 0.2 equiv), NaAsc (134.7 mg, 0.68 mmol, 0.4 equiv) were added to the reaction mixture. The reaction was stirred at rt for 24 h, at which time the reaction was completed as indicated by 1H NMR and TLC. The reaction was stopped, and solvent was removed using a rotovap, the residue was diluted with EtOAc and acidified using 0.1 N HCl (5.0 mL) followed by water wash. The organic layer was collected and dried over anhydrous Na2SO4 and solvent was removed under vacuum to obtain the crude, which was further purified with flash chromatography using eluent of hexanes to 60% EtOAc/Hexanes to obtain the desired product as a yellowish solid (272.0 mg, 71%), Rf = 0.48 in 80% EtOAc/Hexanes, m.p. 93.5–94.5 °C; 1H NMR (400 MHz, CDCl3) δ 8.98 (br s, 1H), 7.47 (s, 1H), 4.66 (t, J = 6.5 Hz, 2H), 3.02 (t, J = 6.5 Hz, 2H), 2.75 (t, J = 7.6 Hz, 2H), 2.23–2.18 (m, 2H), 1.92 (t, J = 2.6 Hz, 1H), 1.82–1.73 (m, 2H), 1.62–1.54 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 173.2, 147.7, 121.8, 84.2, 68.5, 45.7, 34.7, 28.3, 27.9, 24.9, 18.1. HRMS m/z calcd for C11H15N3O2Na [M + Na]+ 244.1056, found 244.1056.
Synthesis of compound 10e. The same procedure for compound 10d was used, 3-azido propionic acid (200.0 mg, 1.74 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 25.0 mL), 1,8-nonadiyne (313.3 mg, 2.6 mmol), CuSO4·5H2O (84.8 mg, 0.34 mmol), NaAsc (134.7 mg, 0.68 mmol), 24 h. The product was purified using flash chromatography (Hexanes to 30% EtOAc/Hexanes) to obtain a yellowish solid (306.0 mg, 75%) as the desired product (Rf = 0.5 in 80% EtOAc/Hexanes). m.p. 137.5–139.0 °C; 1H NMR (400 MHz, CDCl3) 7.39 (s, 1H), 4.62 (t, J = 6.5 Hz, 2H), 3.02 (t, J = 6.5 Hz, 2H), 2.71 (t, J = 7.7 Hz, 2H), 2.23–2.13 (m, 2H), 1.93 (t, J = 2.7 Hz, 1H), 1.72–1.64 (m, 2H), 1.59–1.51 (m, 2H), 1.50–1.43 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 173.0, 148.0, 121.6, 84.5, 68.3, 45.5, 34.6, 28.8, 28.3, 28.2, 25.4, 18.3. HRMS (ESI+) m/z calcd for C12H17N3O2Na [M + Na]+ 258.1213, found 258.1212.
Synthesis of compound 11a. Compound 7c (100.0 mg, 0.15 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL), 6-heptynoic acid (25.2 mg, 0.2 mmol), CuSO4·5H2O (7.7 mg, 0.03 mmol), NaAsc (12.1 mg, 0.06 mmol), 16 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a colorless slurry (96.0 mg, 81%) as the desired product (Rf = 0.32 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.88–7.83 (m, 4H), 7.70 (d, J = 8.2 Hz, 2H), 7.67 (s, 1H), 7.55–7.47 (m, 3H), 7.40–7.32 (m, 5H), 7.22 (d, J = 8.0 Hz, 2H), 6.45 (d, J = 8.8 Hz, 1H), 5.62 (t, J = 10.1 Hz, 1H), 5.31 (t, J = 9.4 Hz, 1H), 4.90 (d, J = 3.6 Hz, 1H), 4.70–4.59 (m, 2H), 4.57–4.49 (m, 1H), 4.22–4.07 (m, 4H), 3.97–3.90 (m, 1H), 2.85–2.77 (m, 2H), 2.43–2.34 (m, 5H), 1.85 (s, 3H), 1.81–1.68 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 176.5, 170.6, 167.5, 165.1, 145.1, 133.8, 133.6, 132.3, 129.9, 129.8, 128.53, 128.46, 128.0, 97.2, 71.6, 69.1, 68.5, 68.3, 66.4, 51.8, 32.8, 27.8, 24.9, 23.5, 22.9, 21.6. HRMS m/z calcd for C38H42N4O12SNa [M + Na]+ 801.2412, found 801.2406.
Synthesis of compound 11b. Compound 7c (100.0 mg, 0.15 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL), 8-nonynoic acid (30.7 mg, 0.2 mmol), CuSO4·5H2O (7.7 mg, 0.03 mmol), NaAsc (12.1 mg, 0.06 mmol), 16 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a colorless slurry (109.0 mg, 88%) as the desired product (Rf = 0.38 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.88–7.82 (m, 4H), 7.70 (d, J = 8.0 Hz, 2H), 7.54–7.45 (m, 3H), 7.38–7.30 (m, 4H), 7.21 (d, J = 7.9 Hz, 2H), 6.15 (d, J = 6.9 Hz, 1H), 5.55 (t, J = 10.1 Hz, 1H), 5.29 (t, J = 8.6 Hz, 1H), 4.86 (d, J = 2.4 Hz, 1H), 4.60 (br s, 2H), 4.52–4.43 (m, 1H), 4.20–4.05 (m, 4H), 3.90–3.84 (m, 1H), 2.73 (br s, 2H), 2.35 (s, 3H), 2.31 (t, J = 7.2 Hz, 2H), 1.86 (s, 3H), 1.72–1.58 (m, 4H), 1.38–1.33 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 176.6, 169.6, 165.9, 164.1, 144.1, 132.6, 132.5, 131.3, 128.9, 128.8, 127.7, 127.6, 127.4, 127.0, 96.5, 70.3, 67.9, 67.6, 67.3, 65.5, 50.8, 32.7, 27.47, 27.45, 23.5, 20.6. HRMS m/z calcd for C40H46N4O12SNa [M + Na]+ 829.2725, found 829.2722.
Synthesis of compound 12a. Compound 9 (100.0 mg, 0.15 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 2.5 mL), 6-heptynoic acid (24.6 mg, 0.19 mmol), CuSO4·5H2O (7.5 mg, 0.03 mmol), NaAsc (11.8 mg, 0.06 mmol), 24 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a colorless slurry (98.0 mg, 82%) as the desired product (Rf = 0.22 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.92–7.83 (m, 4H), 7.69 (d, J = 8.3 Hz, 2H), 7.56–7.46 (m, 3H), 7.40–7.32 (m, 4H), 7.21 (d, J = 8.2 Hz, 2H), 6.43 (d, J = 9.2 Hz, 1H), 5.61 (t, J = 10.1 Hz, 1H), 5.32 (t, J = 10.0 Hz, 1H), 4.88 (d, J = 3.6 Hz, 1H), 4.66–4.57 (m, 1H), 4.54–4.42 (m, 2H), 4.31–4.23 (m, 1H), 4.21–4.08 (m, 2H), 3.82–3.74 (m, 1H), 3.43–3.33 (m, 1H), 2.79 (t, J = 6.7 Hz, 2H), 2.42–2.33 (m, 5H), 2.29–2.19 (m, 2H), 1.93 (s, 3H), 1.81–1.64 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 176.4, 170.9, 167.1, 165.2, 148.1, 145.0, 133.6, 132.3, 129.9, 129.8, 128.7, 128.6, 128.5, 128.4, 128.0, 121.3, 97.1, 71.5, 69.1, 68.5, 68.4, 64.5, 52.1, 46.8, 33.1, 29.6, 28.2, 25.0, 23.8, 23.0, 21.6. HRMS m/z calcd for C39H44N4O12SNa [M + Na]+ 815.2569, found 815.2564.
Synthesis of compound 12b. Compound 9 (100.0 mg, 0.15 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 2.5 mL), 8-nonynoic acid (30.1 mg, 0.19 mmol), CuSO4·5H2O (7.5 mg, 0.03 mmol), NaAsc (11.8 mg, 0.06 mmol), 24 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a colorless slurry (106.0 mg, 86%) as the desired product (Rf = 0.23 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.92–7.84 (m, 4H), 7.69 (d, J = 8.2 Hz, 2H), 7.56–7.46 (m, 2H), 7.41–7.31 (m, 5H), 7.21 (d, J = 8.2 Hz, 2H), 6.38 (d, J = 9.2 Hz, 1H), 5.60 (t, J = 10.0 Hz, 1H), 5.31 (t, J = 9.9 Hz, 1H), 4.84 (d, J = 3.5 Hz, 1H), 4.67–4.57 (m, 1H), 4.55–4.43 (m, 2H), 4.31–4.24 (m, 1H), 4.20–4.07 (m, 2H), 3.87–3.78 (m, 1H), 3.40–3.31 (m, 1H), 2.74 (t, J = 7.5 Hz, 2H), 2.38–2.18 (m, 7H), 1.95 (s, 3H), 1.74–1.59 (m, 4H), 1.42–1.32 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 176.9, 170.8, 167.0, 165.2, 148.5, 145.0, 133.54, 133.48, 132.3, 129.9, 129.8, 128.8, 128.7, 128.4, 128.0, 120.9, 97.5, 71.5, 69.2, 68.6, 68.5, 64.8, 52.0, 46.9, 33.5, 29.9, 28.9, 28.44, 28.37, 25.2, 24.5, 23.0, 21.6. HRMS m/z calcd for C41H48N4O12SNa [M + Na]+ 843.2882, found 843.2876.
Synthesis of compound12c. Compound 9 (100.0 mg, 0.15 mmol), t-BuOH: THF: H2O (v:v:v 1:1:1, 2.5 mL), 10-undecynoic acid (35.5 mg, 0.19 mmol), CuSO4·5H2O (7.5 mg, 0.03 mmol), NaAsc (11.8 mg, 0.06 mmol), 24 h. Purified by flash chromatography using (DCM to 2% MeOH/DCM) to obtain a colorless slurry (98.0 mg, 77%) as the desired product (Rf = 0.27 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.91–7.84 (m, 4H), 7.69 (d, J = 8.2 Hz, 2H), 7.55–7.44 (m, 2H), 7.41–7.30 (m, 5H), 7.20 (d, J = 8.2 Hz, 2H), 6.44 (d, J = 9.2 Hz, 1H), 5.59 (t, J = 10.1 Hz, 1H), 5.31 (t, J = 9.8 Hz, 1H), 4.83 (d, J = 3.5 Hz, 1H), 4.70–4.57 (m, 1H), 4.56–4.43 (m, 2H), 4.32–4.23 (m, 1H), 4.20–4.06 (m, 2H), 3.89–3.80 (m, 1H), 3.40–3.28 (m, 1H), 2.72 (t, J = 7.6 Hz, 2H), 2.37–2.17 (m, 7H), 1.94 (s, 3H), 1.71–1.55 (m, 4H), 1.39–1.24 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 177.8, 170.8, 166.9, 165.2, 148.9, 145.0, 133.5, 133.4, 132.3, 129.84, 129.79, 129.77, 128.8, 128.6, 128.4, 128.1, 128.0, 120.7, 97.5, 71.4, 69.2, 68.5, 68.4, 64.8, 51.9, 46.8, 33.9, 29.9, 29.2, 28.92, 28.89, 28.85, 25.5, 24.6, 23.0, 21.6; HRMS m/z calcd for C43H52N4O12SNa [M + Na]+ 871.3195, found 871.3192.
Synthesis of compound 13a (LM24). Compound 11a (74.0 mg, 0.095 mmol, 1.0 equiv), DMF (13.0 mL), K2CO3 (26.3 mg, 0.19 mmol, 2.0 equiv, 75 °C for 2 h. Purified by flash chromatography using (DCM to 3% MeOH/DCM) to obtain a white solid (51.0 mg, 88%) as the desired product (Rf = 0.32 in 5% MeOH/DCM). m.p. 123.0–125.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.98–7.86 (m, 4H), 7.54–7.46 (m, 3H), 7.41–7.32 (m, 4H), 6.18 (d, J = 8.6 Hz, 1H), 5.62 (dd, J = 10.9, 9.6 Hz, 1H), 5.36 (t, J = 9.9 Hz, 1H), 5.02 (d, J = 3.6 Hz, 1H), 4.87–4.77 (m, 1H), 4.64–4.55 (m, 1H), 4.50–4.42 (m, 1H), 4.22 (dd, J = 11.9, 4.4 Hz, 1H), 4.13–3.94 (m, 3H), 3.63–3.55 (m, 1H), 2.96–2.86 (m, 1H), 2.72–2.61 (m, 1H), 2.30–2.21 (m, 1H), 2.01–1.93 (m, 1H), 1.91 (s, 3H), 1.63–1.48 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 172.3, 170.2, 167.2, 165.5, 148.6, 133.6, 133.5, 129.91, 128.87, 128.8, 128.7, 128.5, 128.4, 120.6, 97.2, 71.0, 70.4, 69.1, 68.6, 64.5, 52.8, 50.0, 33.7, 28.2, 24.7, 23.2, 23.1; HRMS m/z calcd for C31H34N4O9Na [M + Na]+ 629.2218, found 629.2222.
Synthesis of compound 13b (LM26). Compound 11b (100.0 mg, 0.12 mmol), DMF (10.0 mL), K2CO3 (34.3 mg, 0.24 mmol), 75 °C for 5 h. Purified by flash chromatography (DCM to 5% MeOH/DCM) to obtain a white solid (60.0 mg, 76%) as the desired product (Rf = 0.29 in 5% MeOH/DCM). m.p. 108.0–110.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.97–7.87 (m, 4H), 7.54–7.45 (m, 3H), 7.41–7.31 (m, 4H), 6.21 (d, J = 9.1 Hz, 1H, -NH), 5.62 (dd, J = 10.9, 9.5 Hz, 1H, H-3), 5.37 (t, J = 9.8 Hz, 1H, H-4), 4.99 (d, J = 3.6 Hz, 1H, H–1), 4.72–4.67 (m, 2H, -O-CH2-CH2-N), 4.59–4.50 (m, 1H, H-2), 4.22–4.02 (m, 3H, H-6a, H-6b, -O-CHa-CH2-N), 4.00–3.93 (m, 1H, -O-CHb-CH2-N), 3.87–3.78 (m, 1H, H-5), 2.90–2.71 (m, 2H, -HC=C-CH2-CH2-), 2.16–1.98 (m, 2H, -OOC-CH2-CH2-), 1.90 (s, 3H), 1.80–1.68 (m, 1H), 1.67–1.55 (m, 1H), 1.54–1.40 (m, 2H), 1.28–1.07 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 173.3, 170.1, 167.0, 165.3, 148.5 (HC=C-), 133.5, 129.83, 128.79, 128.7, 128.44, 128.42, 120.8 (HC=C-), 97.3 (C-1), 71.1 (C-3), 70.4 (C-4), 68.5 (C-5), 67.1 (-O-CH2-CH2-N), 64.1 (C-6), 52.3 (C-2), 49.6 (-O-CH2-CH2-N), 32.9, 27.9, 27.4, 25.9, 24.7, 23.7, 23.1; HRMS m/z calcd for C33H38N4O9Na [M + Na]+ 657.2531, found 657.2529.
Synthesis of compound 14a (LM34). Compound 12a (96.0 mg, 0.12 mmol), DMF (10.0 mL), K2CO3 (33.5 mg, 0.24 mmol), 75 °C for 2 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a colorless liquid which turns into a white solid over time (66.3 mg, 88%) as the desired product (Rf = 0.2 in 5% MeOH/DCM). m.p. 117.0–118.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.97–7.85 (m, 4H), 7.54–7.45 (m, 2H), 7.42–7.31 (m, 5H), 5.88 (d, J = 9.2 Hz, 1H), 5.65 (t, J = 10.2 Hz, 1H), 5.31 (t, J = 9.6 Hz, 1H), 4.93 (d, J = 3.6 Hz, 1H), 4.75–4.66 (m, 1H), 4.57–4.42 (m, 2H), 4.19–4.01 (m, 3H), 3.55–3.37 (m, 2H), 2.90–2.70 (m, 2H), 2.43–2.16 (m, 4H), 1.87 (s, 3H), 1.79–1.72 (m, 2H), 1.69–1.62 (m, 2H), 1.53–1.45 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 172.4, 169.9, 167.2, 165.3, 147.3, 133.5, 129.9, 129.8, 128.7, 128.5, 126.9, 121.2, 97.4, 71.4, 69.5, 68.6, 64.8, 64.0, 52.3, 46.6, 41.0, 34.3, 29.8, 27.3, 24.4, 23.3, 23.2; HRMS m/z calcd for C32H36N4O9Na [M + Na]+ 643.2375, found 643.2374.
Synthesis of compound 14b (LM36). Compound 12b (86.0 mg, 0.10 mmol), DMF (10.0 mL), K2CO3 (28.9 mg, 0.20 mmol), 75 °C for 2 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a white solid (56.6 mg, 83%) as the desired product (Rf = 0.3 in 5% MeOH/DCM). m.p. 97.0–98.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.98–7.86 (m, 4H), 7.53–7.46 (m, 2H), 7.40–7.31 (m, 5H), 5.95 (d, J = 9.1 Hz, 1H), 5.67 (t, J = 10.2 Hz, 1H), 5.35 (t, J = 9.7 Hz, 1H), 4.98 (d, J = 3.6 Hz, 1H), 4.69–4.60 (m, 1H), 4.55–4.48 (m, 1H), 4.47–4.39 (m, 1H), 4.24–4.09 (m, 3H), 3.66–3.51 (m, 2H), 2.86–2.68 (m, 2H), 2.43–2.24 (m, 2H), 2.08 (t, J = 7.0 Hz, 2H), 1.88 (s, 3H), 1.74–1.64 (m, 2H), 1.61–1.47 (m, 2H), 1.33–1.16 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 173.2, 169.9, 167.2, 165.4, 148.1, 133.53, 133.51, 130.0, 129.84, 128.79, 128.7, 128.46, 128.45, 120.9, 98.0, 71.4, 70.0, 68.5, 65.5, 63.8, 52.6, 46.6, 32.4, 30.3, 27.4, 26.6, 25.7, 24.6, 23.5, 23.2; HRMS m/z calcd for C34H40N4O9Na [M + Na]+ 671.2688, found 671.2686.
Synthesis of compound 14c (LM38). Compound 12c (90.0 mg, 0.11 mmol), DMF (10.0 mL), K2CO3 (30.4 mg, 0.20 mmol), 75 °C for 2 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a white solid (59.5 mg, 83%) as the desired product (Rf = 0.32 in 5% MeOH/DCM). m.p. 87.0–89.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.97–7.88 (m, 4H), 7.54–7.47 (m, 2H), 7.41–7.31 (m, 5H), 6.12 (d, J = 8.8 Hz, 1H), 5.62 (t, J = 10.6 Hz, 1H), 5.44 (t, J = 9.8 Hz, 1H), 4.91 (d, J = 3.6 Hz, 1H), 4.61–4.42 (m, 3H), 4.33–4.12 (m, 3H), 3.71–3.61 (m, 1H), 3.46–3.36 (m, 1H), 2.88–2.71 (m, 2H), 2.33–2.04 (m, 4H), 1.93 (s, 3H), 1.75–1.68 (m, 4H), 1.56–1.47 (m, 2H), 1.28–1.15 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 173.4, 170.2, 167.2, 165.4, 133.52, 133.47, 129.9, 129.8, 128.9, 128.8, 128.5, 128.4, 121.3, 97.7, 71.4, 70.2, 68.0, 65.0, 63.2, 52.6, 46.6, 33.7, 30.2, 28.20, 28.19, 28.14, 27.7, 27.2, 24.9, 24.4, 23.1; HRMS m/z calcd for C36H44N4O9Na [M + Na]+ 699.3001, found 699.3000.
Compounds 15a-b and 16a-b were prepared similarly as compound 8a.
Synthesis of compound 15a. Compound 7c (200.0 mg, 0.31 mmol, 1.0 equiv), t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL), 10d (89.2 mg, 0.4 mmol, 1.3 equiv), CuSO4·5H2O (15.5 mg, 0.062 mmol, 0.2 equiv), NaAsc (24.6 mg, 0.124 mmol, 0.4 equiv), 24 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a yellowish slurry (209.0 mg, 78%) as the desired product (Rf = 0.5 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.86–7.80 (m, 4H), 7.68 (d, J = 8.3 Hz, 2H), 7.54–7.46 (m, 2H), 7.45 (s, 1H), 7.41 (s, 1H), 7.38–7.29 (m, 4H), 7.20 (d, J = 8.0 Hz, 2H), 6.26 (d, J = 9.1 Hz, 1H), 5.54 (t, J = 10.8 Hz, 1H), 5.28 (t, J = 9.6 Hz, 1H), 4.84 (d, J = 3.6 Hz, 1H), 4.63–4.55 (m, 4H), 4.49–4.42 (m, 1H), 4.20–4.04 (m, 4H), 3.89–3.83 (m, 1H), 2.91 (t, J = 6.2 Hz, 2H), 2.76–2.66 (m, 4H), 2.34 (s, 3H), 1.82 (s, 3H), 1.75–1.62 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 172.6, 171.0, 166.7, 165.1, 148.2, 147.3, 145.1, 133.6, 133.4, 132.3, 129.9, 129.81, 129.75, 128.7, 128.6, 128.4, 128.0, 122.2, 121.6, 97.5, 71.2, 68.9, 68.6, 68.2, 66.7, 51.9, 49.6, 45.9, 35.1, 28.5, 28.3, 25.2, 25.0, 22.8, 21.6. HRMS m/z calcd for C42H47N7O12SNa [M + Na]+ 896.2896, found 896.2886.
Synthesis of compound 15b. Compound 7c (100.0 mg, 0.15 mmol, 1.0 equiv), t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL), 10e (46.8 mg, 0.19 mmol, 1.3 equiv), CuSO4·5H2O (7.3 mg, 0.03 mmol, 0.2 equiv), NaAsc (12.3 mg, 0.06 mmol, 0.4 equiv), 24 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a yellowish slurry (108.0 mg, 79%) as the desired product (Rf = 0.41 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.88–7.81 (m, 4H), 7.69 (d, J = 8.3 Hz, 2H), 7.54–7.47 (m, 2H), 7.45 (s, 1H), 7.40 (s, 1H), 7.38–7.30 (m, 4H), 7.21 (d, J = 7.9 Hz, 2H), 6.11 (d, J = 9.1 Hz, 1H), 5.53 (t, J = 10.8 Hz, 1H), 5.28 (t, J = 9.6 Hz, 1H), 4.86 (d, J = 3.6 Hz, 1H), 4.64–4.58 (m, 4H), 4.50–4.42 (m, 1H), 4.21–4.07 (m, 4H), 3.93–3.86 (m, 1H), 2.91 (t, J = 6.2 Hz, 2H), 2.73–2.65 (m, 4H), 2.35 (s, 3H), 1.83 (s, 3H), 1.70–1.59 (m, 4H), 1.36–1.28 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 172.5, 170.8, 166.8, 165.1, 148.4, 147.5, 145.1, 133.6, 133.5, 132.3, 129.83, 129.77, 128.7, 128.6, 128.4, 128.0, 122.2, 121.6, 97.5, 71.2, 68.9, 68.7, 68.2, 66.6, 51.9, 49.6, 45.8, 35.1, 29.0, 28.4, 28.0, 25.3, 25.0, 22.9, 21.6. HRMS m/z calcd for C43H49N7O12SNa [M + Na]+ 910.3052, found 910.3043.
Synthesis of compound 15c. To a 50 mL RBF, compound 9 (100.0 mg, 0.15 mmol, 1.0 equiv), t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL), 10d (43.1 mg, 0.19 mmol, 1.3 equiv), CuSO4·5H2O (7.3 mg, 0.03 mmol, 0.2 equiv), NaAsc (12.3 mg, 0.06 mmol, 0.4 equiv), 16 h. Purified by flash chromatography (DCM to 5% MeOH/DCM) to obtain a yellowish slurry (116.0 mg, 87%) as the desired product (Rf = 0.41 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.91–7.85 (m, 4H), 7.68 (d, J = 8.3 Hz, 2H), 7.56–7.46 (m, 2H), 7.43 (s, 1H), 7.40–7.31 (m, 5H), 7.20 (d, J = 8.1 Hz, 2H), 6.39 (d, J = 9.1 Hz, 1H), 5.59 (t, J = 9.7 Hz, 1H), 5.31 (t, J = 9.7 Hz, 1H), 4.84 (d, J = 3.5 Hz, 1H), 4.68–4.56 (m, 3H), 4.54–4.42 (m, 2H), 4.33–4.24 (m, 1H), 4.20–4.07 (m, 2H), 3.86–3.78 (m, 1H), 3.34–3.26 (m, 1H), 2.88 (t, J = 5.9 Hz, 2H), 2.78–2.66 (m, 4H), 2.35 (s, 3H), 2.32–2.16 (m, 2H), 1.94 (s, 3H), 1.80–1.59 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 171.2, 166.9, 165.2, 148.3, 147.3, 145.0, 133.5, 133.4, 132.3, 129.9, 129.8, 128.8, 128.7, 128.4, 128.0, 122.4, 120.9, 97.5, 71.4, 69.1, 68.6, 68.4, 64.8, 52.1, 46.8, 46.0, 35.4, 29.7, 28.5, 28.3, 25.04, 24.96, 23.0, 21.6. HRMS m/z calcd for C43H49N7O12SNa [M + Na]+ 910.3052, found 910.3043.
Synthesis of compound 15d. Compound 9 (100.0 mg, 0.15 mmol, 1.0 equiv), t-BuOH: THF: H2O 1:1:1 (v:v:v 1:1:1, 3.0 mL), 10e (45.9 mg, 0.19 mmol, 1.3 equiv), CuSO4·5H2O (7.3 mg, 0.03 mmol, 0.2 equiv), NaAsc (11.9 mg, 0.06 mmol, 0.4 equiv), 16 h. Purified by flash chromatography (DCM to 5% MeOH/DCM) to obtain a yellowish slurry (113.0 mg, 83%) as the desired product (Rf = 0.46 in 5% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.90–7.84 (m, 4H), 7.69 (d, J = 8.3 Hz, 2H), 7.56–7.45 (m, 2H), 7.44–7.30 (m, 6H), 7.21 (d, J = 8.2 Hz, 2H), 6.36 (d, J = 9.1 Hz, 1H), 5.59 (t, J = 9.7 Hz, 1H), 5.31 (t, J = 9.7 Hz, 1H), 4.84 (d, J = 3.5 Hz, 1H), 4.66–4.57 (m, 3H), 4.54–4.46 (m, 2H), 4.31–4.25 (m, 1H), 4.20–4.08 (m, 2H), 3.87–3.80 (m, 1H), 3.38–3.20 (m, 1H), 2.90 (t, J = 6.0 Hz, 2H), 2.73–2.65 (m, 4H), 2.35 (s, 3H), 2.32–2.19 (m, 2H), 1.93 (s, 3H), 1.73–1.59 (m, 4H), 1.36–1.25 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 170.8, 167.0, 165.2, 148.6, 147.5, 145.0, 133.54, 133.46, 132.3, 129.9, 129.8, 128.8, 128.7, 128.4, 128.0, 122.2, 121.0, 97.5, 71.5, 69.1, 68.6, 68.4, 64.8, 52.0, 47.0, 45.9, 35.2, 29.9, 29.0, 28.4, 28.0, 25.2, 25.0, 23.0, 21.6. HRMS m/z calcd for C44H51N7O12SNa [M + Na]+ 924.3209, found 924.3213.
Compounds 16a-d, 22, 24 were prepared similarly as for compound 13c. The amount of all chemicals, reaction time, yield, Rf value, and characterization of the product are listed, respectively. The macrocycles were typically obtained first as a clear waxy liquid, which upon standing for a few days, turned to a white solid.
Synthesis of compound 16a (DM24). Compound 15a (75.0 mg, 0.086 mmol), DMF (12.0 mL), K2CO3 (23.7 mg, 0.17 mmol), 85 °C for 4.0 h. The crude was purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a white solid (54.0 mg, 90%) as the desired product 16a (Rf = 0.14 in 5% MeOH/DCM). The reaction was also carried out using CH3CN as the solvent: Compound 15a (50.0 mg, 0.057 mmol) was dissolved in CH3CN (12.0 mL), then K2CO3 (15.8 mg, 0.11 mmol) was added, the reaction mixture was stirred at 75 °C for 11.0 h. The solvent was removed using a rotavap, and the crude was purified using flash column similarly to give the pure product (31.0 mg, 77%). m.p. 127.0–129.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.94–7.86 (m, 4H), 7.54–7.44 (m, 2H), 7.39–7.32 (m, 5H), 7.30 (s, 1H), 5.96 (d, J = 9.3 Hz, 1H), 5.55 (t, J = 10.8 Hz, 1H), 5.38 (t, J = 9.9 Hz, 1H), 4.73 (d, J = 3.5 Hz, 1H), 4.70–4.58 (m, 4H), 4.51–4.43 (m, 1H), 4.21–4.14 (m, 1H), 4.13–4.00 (m, 3H), 3.88–3.78 (m, 1H), 3.02–2.93 (m, 1H), 2.89–2.82 (m, 1H), 2.80–2.70 (m, 2H), 2.66–2.53 (m, 2H) 1.92 (s, 3H), 1.67–1.55 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 170.3, 170.1, 166.8, 165.2, 148.8, 147.9, 133.6, 133.4, 129.8, 129.7, 128.8, 128.7, 128.5, 128.4, 121.6, 120.7, 98.2, 70.9, 69.2, 68.1, 66.9, 62.8, 51.9, 50.3, 45.5, 34.8, 27.7, 24.8, 24.7, 23.2; HRMS m/z calcd for C35H39N7O9Na [M + Na]+ 724.2701, found 724.2704.
Synthesis of compound 16b (DM25). Compound 15b (68.0 mg, 0.077 mmol), DMF (12.0 mL), K2CO3 (21.2 mg, 0.15 mmol), 80 °C for 2.0 h. Purified by flash chromatography (DCM to 2% MeOH/DCM) to obtain a white solid (48.0 mg, 88%) as the desired product (Rf = 0.2 in 5% MeOH/DCM). The reaction was also carried out in acetonitrile: Compound 15b (50.0 mg, 0.05 mmol, 1.0 equiv), CH3CN (10.0 mL), K2CO3 (15.6 mg, 0.11 mmol, 2.0 equiv), 75 °C for 14.0 h, yield 28.5 mg, 71%. M.p. 239.0–240.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.92–7.85 (m, 4H), 7.62 (s, 1H), 7.54–7.47 (m, 2H), 7.46 (s, 1H), 7.39–7.30 (m, 4H), 5.91 (d, J = 9.3 Hz, 1H), 5.56 (t, J = 9.5 Hz, 1H), 5.30 (t, J = 9.9 Hz, 1H), 4.67 (d, J = 3.5 Hz, 1H), 4.65–4.55 (m, 4H), 4.51–4.45 (m, 1H), 4.36–4.30 (m, 1H), 4.16–4.08 (m, 2H), 4.02–3.95 (m, 1H), 3.93–3.87 (m, 1H), 3.03–2.90 (m, 2H), 2.79–2.70 (m, 4H), 1.91 (s, 3H), 1.75–1.66 (m, 4H), 1.32–1.25 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 170.1, 169.9, 166.9, 165.4, 148.2, 147.6, 133.6, 133.5, 129.83, 129.81, 128.8, 128.6, 128.5, 128.4, 122.2, 121.6, 97.9, 71.2, 69.6, 68.6, 66.8, 63.4, 52.0, 49.6, 45.2, 34.3, 27.5, 27.3, 26.1, 24.5, 23.2; HRMS m/z calcd for C36H41N7O9Na [M + Na]+ 738.2858, found 738.2862.
Synthesis of compound 16c (DM34). Compound 15c (120.0 mg, 0.14 mmol), DMF (15.0 mL), K2CO3 (37.3 mg, 0.27 mmol), 75 °C for 2.0 h. Purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a white solid (82.0 mg, 85%) as the desired product, Rf = 0.21 in 5% MeOH/DCM. The reaction was also carried out in acetonitrile: Compound 15c (50.0 mg, 0.05 mmol, 1.0 equiv), CH3CN (8.0 mL), K2CO3 (15.7 mg, 0.11 mmol, 2.0 equiv), 75 °C for 14.0 h, yield 31.5 mg, 78%, m.p. 99.0–101.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.93–7.89 (m, 4H), 7.54–7.47 (m, 2H), 7.39–7.34 (m, 6H), 6.09 (d, J = 8.8 Hz, 1H), 5.54 (t, J = 10.6 Hz, 1H), 5.46 (t, J = 9.6 Hz, 1H), 4.77 (d, J = 3.7 Hz, 1H), 4.60–4.44 (m, 5H), 4.33–4.26 (m, 1H), 4.17–4.03 (m, 2H), 3.59–3.49 (m, 1H), 3.30–3.21 (m, 1H), 2.83–2.70 (m, 6H), 2.33–2.20 (m, 2H), 1.94 (s, 3H), 1.80–1.69 (m, 2H), 1.69–1.59 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 170.3, 170.1, 167.1, 165.3, 148.2, 147.8, 133.6, 133.5, 129.9, 129.7, 128.8, 128.76, 128.5, 128.4, 121.7, 121.2, 97.7, 71.3, 69.7, 67.7, 64.8, 63.2, 52.4, 46.4, 45.4, 34.8, 29.6, 28.0, 25.1, 24.8, 23.1; HRMS m/z calcd for C36H41N7O9Na [M + Na]+ 738.2858, found 738.2855.
Synthesis of compound 16d (DM35). Compound 15d (90.0 mg, 0.10 mmol), DMF (12.0 mL), K2CO3 (27.5 mg, 0.19 mmol), 80 °C for 3.0 h. The crude was purified by flash chromatography (DCM to 3% MeOH/DCM) to obtain a white solid upon standing (57.0 mg, 78%) as the desired product (Rf = 0.26 in 5% MeOH/DCM). The reaction was also carried out using CH3CN as the solvent: Compound 15d (50.0 mg, 0.055 mmol), CH3CN (8.0 mL), K2CO3 (15.3 mg, 0.11 mmol), 75 °C for 15.0 h, yield 30.0 mg, 74%. m.p. 92.0–94.0 °C; 1H NMR (400 MHz, CDCl3) δ 7.94–7.89 (m, 4H), 7.55–7.46 (m, 2H), 7.42 (s, 1H), 7.41 (s, 1H), 7.38–7.32 (m, 4H), 6.10 (d, J = 9.0 Hz, 1H), 5.57 (t, J = 9.6 Hz, 1H), 5.40 (t, J = 9.8 Hz, 1H), 4.84 (d, J = 3.7 Hz, 1H), 4.61–4.44 (m, 5H), 4.36–4.28 (m, 1H), 4.25–4.15 (m, 2H), 3.76–3.65 (m, 1H), 3.44–3.33 (m, 1H), 2.99–2.81 (m, 2H), 2.80–2.73 (m, 2H), 2.73–2.67 (m, 2H), 2.36–2.23 (m, 2H), 1.93 (s, 3H), 1.74–1.65 (m, 4H), 1.34–1.27 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 170.3, 169.8, 167.0, 165.4, 148.3, 147.7, 133.6, 133.5, 129.9, 129.83, 128.80, 128.7, 128.5, 128.4, 122.0, 121.4, 97.6, 71.5, 69.7, 68.4, 65.6, 63.7, 52.3, 46.9, 45.3, 34.5, 29.9, 28.1, 27.8, 26.7, 24.8, 24.8, 23.1; HRMS m/z calcd for C37H43N7O9Na [M + Na]+ 752.3014, found 752.3011.
Synthesis of compound18. To a 50 mL RBF, compound 17 (200.0 mg, 0.55 mmol) was dissolved in HOAc: H2O (v:v 4:1, 5.0 mL) and heated at 75 °C for 4 h. The reaction was stopped, and solvent was dried under vacuum to afford the crude, which was purified by flash chromatography using eluent from DCM to 3% MeOH/DCM to obtain a colorless liquid (129 mg, 85%) as the desired product (Rf = 0.3 in 10% MeOH/DCM). 1H NMR (400 MHz, DMSO-d6) δ 7.97 (d, J = 8.4 Hz, 1H), 4.99 (d, J = 5.6 Hz, 1H), 4.80 (d, J = 5.7 Hz, 1H), 4.56 (d, J = 3.5 Hz, 1H), 4.50 (t, J = 6.0 Hz, 1H), 3.87–3.77 (m, 2H), 3.73–3.61 (m, 2H), 3.52–3.40 (m, 2H), 3.35–3.31 (m, 1H), 3.25 (s, 3H), 3.18–3.10 (m, 1H); 13C NMR (100 MHz, DMSO-d6) δ 167.5, 97.7, 72.7, 70.73, 70.65, 60.7, 54.2, 53.9, 50.5. LC-MS (ESI+) calcd for C9H16N4O6 [M + H]+ 277.1, found 277.1.
Synthesis of compound19. In a 50 mL RBF, compound 18 (500 mg, 1.81 mmol) was taken and dissolved in pyridine (5.0 mL). To this solution, tosyl chloride (862.7 mg, 4.52 mmol) dissolved in pyridine (5.0 mL) was added dropwise at 0 °C. The reaction was monitored in 1.5 h to see full conversion. Pyridine was dried under vacuum and crude was coated on silica gel and isolated by flash chromatography using eluent from DCM to 2% MeOH/DCM to obtain a sticky colorless slurry (628 mg, 81%) as the desired product (Rf = 0.51 in 10% MeOH/DCM). 1H NMR (400 MHz, CDCl3) δ 7.80 (d, J = 8.3 Hz, 2H), 7.34 (d, J = 8.0 Hz, 2H), 6.63 (d, J = 9.0 Hz, 1H), 4.63 (d, J = 3.7 Hz, 1H), 4.36–4.27 (m, 2H), 4.11–3.99 (m, 3H), 3.78–3.71 (m, 1H), 3.67 (t, J = 9.6 Hz, 1H), 3.49 (t, J = 9.4 Hz, 1H), 3.35 (s, 3H), 3.06 (br s, 2H), 2.44 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 168.3, 145.0, 132.8, 129.9, 128.0, 98.2, 73.4, 70.6, 69.5, 69.0, 55.4, 53.3, 52.4, 21.6. LC-MS (ESI+) calcd for C16H22N4O8S [M + H]+ 431.1, found 431.1.
Synthesis of compound 20. In a 50 mL RBF, compound 19 (628 mg, 1.46 mmol, 1.0 equiv), pyridine (3.0 mL) and benzoyl chloride (0.51 mL, 4.38 mmol, 3.0 equiv) was added at 0 °C dropwise and let it stir for 1.5 h to see full conversion. The reaction mixture was extracted with DCM (25.0 mL) and washed with NH4Cl (10.0 mL) and NaHCO3 (10.0 mL) followed by brine (10.0 mL). The organic layer was then dried over anhydrous Na2SO4 and concentrated under reduced pressure to obtain the crude. Crude was purified by flash chromatography using eluent from pure hexanes to 40% EtOAc/Hexanes to obtain a colorless liquid (850 mg, 91%) as the desired product (Rf = 0.35 in 40% EtOAc/Hexanes). 1H NMR (400 MHz, CDCl3) δ 7.91–7.81 (m, 4H), 7.72 (d, J = 8.3 Hz, 2H), 7.55–7.45 (m, 2H), 7.39–7.31 (m, 4H), 7.22 (d, J = 8.0 Hz, 2H), 6.63 (d, J = 9.4 Hz, 1H), 5.56 (dd, J = 10.8, 9.5 Hz, 1H), 5.36 (t, J = 9.6 Hz, 1H), 4.78 (d, J = 3.5 Hz, 1H), 4.50–4.42 (m, 1H), 4.23–4.16 (m, 2H), 4.15–4.09 (m, 1H), 3.85 (d, J = 16.6 Hz, 1H), 3.73 (d, J = 16.6 Hz, 1H), 3.45 (s, 3H), 2.37 (s, 3H); 13C NMR (100 MHz, CDCl3) δ 166.72, 166.69, 165.1, 144.9, 133.52, 133.46, 132.5, 129.9, 129.7, 128.7, 128.6, 128.4, 128.0, 97.9, 71.3, 68.8, 68.11, 68.05, 55.7, 52.5, 52.2, 21.6. LC-MS (ESI+) calcd for C30H31N4O10S [M + H]+ 639.2, found 639.2.
Synthesis of compound21. Compound 20 (110.0 mg, 0.17 mmol, 1.0 equiv) in t-BuOH: THF: H2O (v:v:v 1:1:1, 3.0 mL) and 10-undecynoic acid 10c (40.8 mg, 0.22 mmol, 1.3 equiv), CuSO4∙5H2O (8.6 mg, 0.034 mmol, 0.2 equiv), NaAsc (13.7 mg, 0.069 mmol, 0.4 equiv) and Tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine (TBTA) (18.3 mg, 0.03 mmol, 0.2 equiv) was added and the reaction mixture was stirred at rt for 7 h. The reaction was stopped, and solvent was dried under vacuum to afford the crude, which was purified by flash chromatography using eluent from DCM to 2% MeOH/DCM to obtain white solid (95 mg, 67%) as the desired product (Rf = 0.5 in 5% MeOH/DCM). m.p. 74.5–77.0 °C. 1H NMR (400 MHz, CDCl3) δ 7.89–7.79 (m, 4H), 7.71 (d, J = 8.3 Hz, 2H), 7.54–7.47 (m, 2H), 7.38–7.32 (m, 4H), 7.21 (d, J = 7.9 Hz, 2H), 7.11 (s, 1H), 6.20 (d, J = 9.3 Hz, 1H), 5.54–5.48 (m, 1H), 5.34 (t, J = 9.6 Hz, 1H), 4.91 (d, J = 16.5 Hz, 1H), 4.83 (d, J = 16.5 Hz, 1H), 4.74 (d, J = 3.6 Hz, 1H), 4.49–4.41 (m, 1H), 4.22–4.09 (m, 3H), 3.40 (s, 3H), 2.72–2.61 (m, 2H), 2.36 (s, 3H), 2.33 (t, J = 7.4 Hz, 2H), 1.69–1.54 (m, 4H), 1.36–1.29 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 178.4, 178.1, 166.5, 165.5, 165.0, 149.0, 144.9, 133.5, 132.5, 129.9, 129.8, 128.61, 128.58, 128.5, 128.4, 128.0, 121.9, 97.8, 71.5, 68.7, 68.1, 68.0, 55.8, 52.6, 52.4, 33.91, 33.88, 29.1, 29.01, 28.97, 28.96, 28.93, 28.89, 28.87, 28.6, 28.4, 25.5, 24.71, 24.66, 21.6, 18.4. LC-MS (ESI+) calcd for C41H49N4O12S [M + H]+ 821.3, found 821.4.
Synthesis of compound 23. Compound 20 (100 mg, 0.16 mmol) was mixed with THF: H2O: t-BuOH (v:v:v 1:1:1, 3.0 mL). To this solution, 10d (45.0 mg, 0.20 mmol), CuSO4∙5H2O (7.8 mg, 0.031 mmol) and NaAsc (12.4 mg, 0.063 mmol) were added and the reaction mixture was stirred at rt for 12 h. The reaction was stopped, and solvent was dried under vacuum, and the crude was purified by flash chromatography using eluent from DCM to 2% DCM/MeOH to obtain a white solid (112 mg, 83%) as the desired product (Rf =0.27 in 5% MeOH/DCM). m.p. 93.5–95.5 °C; 1H NMR (400 MHz, CDCl3) δ 7.84–7.77 (m, 4H), 7.70 (d, J = 8.3 Hz, 2H), 7.53–7.44 (m, 3H), 7.37–7.28 (m, 4H), 7.20 (d, J = 8.1 Hz, 2H), 7.14 (br s, 1H), 6.60 (d, J = 8.7 Hz, 1H), 5.55 (t, J = 10.3 Hz, 1H), 5.37 (t, J = 9.7 Hz, 1H), 4.99–4.84 (m, 2H), 4.77 (d, J = 3.3 Hz, 1H), 4.66–4.57 (m, 2H), 4.49–4.42 (m, 1H), 4.21–4.15 (m, 2H), 4.14–4.08 (m, 1H), 3.39 (s, 3H), 2.92 (t, J = 5.3 Hz, 2H), 2.73 (t, J = 6.0 Hz, 2H), 2.62–2.53 (m, 2H), 2.34 (s, 3H), 1.72–1.47 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 172.4, 166.5, 165.7, 165.0, 148.3, 147.1, 145.0, 133.6, 132.4, 129.81, 129.76, 129.7, 128.6, 128.53, 128.45, 128.4, 128.0, 122.6, 122.3, 97.8, 71.6, 68.6, 68.0, 55.8, 52.5, 52.4, 45.9, 34.9, 28.3, 27.7, 24.9, 24.8, 21.6. LC-MS (ESI+) calcd for C41H46N7O12S [M + H]+ 860, found 860.
Synthesis of compound 22 (C2ML). Compound 21 (70.0 mg, 0.085 mmol), DMF (14.0 mL) and K2CO3 (23.5 mg, 0.17 mmol), 75 °C, 2 h. Purification by flash chromatography (DCM to 1% MeOH/DCM) to obtain 22 as a white solid (80%, 44 mg). Rf = 0.64 in 5% MeOH/DCM. m.p. 207.5–210.0 °C. 1H NMR (400 MHz, CDCl3) δ 7.98–7.88 (m, 4H), 7.55–7.48 (m, 3H), 7.41–7.34 (m, 4H), 5.55 (d, J = 9.3 Hz, 1H), 5.42–5.34 (m, 2H), 4.98 (d, J = 16.0 Hz, 1H), 4.80 (d, J = 16.0 Hz, 1H), 4.47–4.27 (m, 4H), 3.91–3.81 (m, 1H), 3.37 (s, 3H), 2.84 (t, J = 6.1 Hz, 2H), 2.29–2.07 (m, 2H), 1.78–1.67 (m, 2H), 1.67–1.49 (m, 2H), 1.39–1.19 (m, 8H); 13C NMR (100 MHz, CDCl3) δ 173.3, 166.6, 166.0, 165.6, 149.6, 133.5, 129.9, 129.8, 129.7, 129.0, 128.9, 128.5, 128.4, 122.5, 97.8, 72.6, 70.2, 68.7, 62.4, 56.0, 53.7, 53.4, 52.3, 34.2, 31.5, 30.4, 29.9, 29.6, 28.7, 25.4, 25.0. LC-MS (ESI+) calcd for C34H41N4O9 [M + H]+ 649, found 649.
Synthesis of compound 24 (C2DLM). Compound 23 (75.0 mg, 0.087 mmol), K2CO3 (24.1 mg, 0.17 mmol), DMF (10.0 mL), 70 °C, 2.0 h. Purification by flash chromatography (DCM to 2% MeOH/DCM) to obtain a white solid (46 mg, 77%) as the desired product. Using Na2CO3 as the base: Compound 23 (100.0 mg, 0.12 mmol, 1.0 equiv), Na2CO3 (24.6 mg, 0.23 mmol, 2.0 equiv), DMF (12 mL), 70 °C, 2.0 h. The pure compound 24 was obtained in 83% yield, 66 mg. Rf = 0.4 in 5% MeOH/DCM. m.p. 83.5–85.0 °C; 1H NMR (400 MHz, CDCl3) δ7.97–7.87 (m, 4H), 7.57–7.46 (m, 3H), 7.43–7.32 (m, 5H), 5.54 (d, J = 9.2 Hz, 1H), 5.35–5.28 (m, 1H), 5.24 (t, J = 9.9 Hz, 1H), 4.93 (d, J = 16.2 Hz, 1H), 4.83 (d, J = 16.2 Hz, 1H), 4.67–4.51 (m, 2H), 4.38–4.25 (m, 4H), 3.70–3.62 (m, 1H), 3.01–2.90 (m, 5H), 2.89–2.71 (m, 4H), 2.07–1.92 (m, 2H), 1.83–1.71 (m, 2H); 13C NMR (100 MHz, CDCl3) δ 170.7, 166.5, 165.7, 165.6, 149.2, 147.3, 133.6, 133.4, 129.88, 129.85, 128.9, 128.7, 128.5, 128.4, 122.2, 121.8, 97.4, 72.2, 69.7, 68.3, 63.6, 55.3, 53.4, 52.0, 45.5, 34.8, 29.4, 27.6, 26.1, 25.2. LC-MS (ESI+) calcd for C34H38N7O9 [M + H]+ 688, found 688.
Synthesis of compound 25 (C2DDL). Compound 23 (100.0 mg, 0.12 mmol), Cs2CO3 (75.8 mg, 0.23 mmol), DMF (12 mL), 70 °C, 2.0 h. After solvent was removed, the crude was purified by flash chromatography (DCM to 5% MeOH/DCM) to obtain the dimeric macrodilactone compound 25 as a white solid (41 mg, 51 %). Rf = 0.32 in 5% MeOH/DCM). m.p. 257.0–258.0 °C; 1H NMR (400 MHz, CDCl3) δ 8.03–7.97 (m, 4H), 7.96–7.91 (m, 4H), 7.54–7.48 (m, 6H), 7.47 (s, 2H), 7.42–7.33 (m, 8H), 5.31–5.21 (m, 4H), 5.16 (t, J = 9.9 Hz, 2H), 5.09 (d, J = 16.8 Hz, 2H), 4.73–4.64 (m, 4H), 4.56–4.49 (m, 2H), 4.47 (d, J = 4.1 Hz, 2H), 4.38–4.27 (m, 6H), 3.56–3.47 (m, 2H), 3.07 (s, 6H), 2.99–2.92 (m, 4H), 2.88–2.69 (m, 8H), 2.06–1.95 (m, 4H), 1.77–1.68 (m, 4H); 13C NMR (100 MHz, CDCl3) δ 169.9, 166.7, 165.7, 165.4, 149.3, 148.8, 133.5, 133.4, 132.1, 130.0, 129.9, 128.86, 128.85, 128.5, 128.4, 122.8, 97.4, 72.7, 70.0, 68.6, 63.6, 55.5, 53.1, 51.8, 50.4, 33.9, 29.8, 27.1, 26.1, 25.3. LC-MS (ESI+) calcd for C68H74N14O18Na [M + Na]+ 1398 found 1398.
Synthesis of compound 31 and a general procedure and example in Table 5.
Sugar azide 26 (40.0 mg, 0.11 mmol, 1.0 equiv) and 4-t-butylphenylacetylene (29.0 µL, 0.16 mmol, 1.5 equiv) were dissolved in EtOH:H2O (v 1:1, 2.0 mL), then CuSO4·5H2O (5.36 mg, 0.021 mmol, 0.2 equiv) and sodium ascorbate (8.51 mg, 0.043 mmol, 0.4 equiv) were added to the reaction mixture. To this mixture, macrocycle DM25 (3.86, 5.0 mol%) was added. The reaction was stirred rt for 5.0 h to at which time the starting material was full converted to product, as indicated by 1H NMR. The reaction was stopped, and solvent was removed using a rotavap, to obtain the crude, which was further purified with flash chromatography using eluent of DCM to 1% MeOH/DCM to obtain the desired product as white solid (54 mg, 95%), Rf = 0.35 in 5% MeOH/DCM. 1H NMR (400 MHz, CDCl3) δ 8.08 (s, 1H), 7.76 (d, J = 8.5 Hz, 2H), 7.44 (d, J = 8.5 Hz, 2H), 6.41 (d, J = 9.1 Hz, 1H), 6.11 (d, J = 9.9 Hz, 1H), 5.52 (dd, J = 10.3, 9.5 Hz, 1H), 5.26 (t, J = 9.7 Hz, 1H), 4.64 (q, J = 9.8 Hz, 1H), 4.35–4.27 (m, 1H), 4.19–4.12 (m, 1H), 4.05–3.97 (m, 1H), 2.07 (s, 9H), 1.76 (s, 3H), 1.34 (s, 9H); 13C NMR (100 MHz, CDCl3) δ 170.70, 170.66, 170.6, 169.3, 151.8, 148.0, 126.9, 125.9, 125.7, 118.8, 85.9, 75.0, 72.4, 68.0, 61.7, 53.6, 34.7, 31.3, 22.8, 20.7, 20.60, 20.58. LC-MS (ESI+) calcd for C26H34N4O8Na [M + Na]+ 553 found 553.