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Correction published on 16 September 2022, see Molecules 2022, 27(18), 6056.
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Article

Novel Antifungal Dimers from the Roots of Taiwania cryptomerioides

1
Bioresource Collection and Research Center (BCRC), Food Industry Research and Development Institute (FIRDI), Hsinchu 300, Taiwan
2
Product & Process Research Center (PPRC), Food Industry Research and Development Institute (FIRDI), Hsinchu 300, Taiwan
3
School of Pharmacy, College of Pharmacy, Kaohsiung Medical University, Kaohsiung 807, Taiwan
4
Department of Chemistry, National Taiwan University, Taipei 106, Taiwan
5
Department of Biotechnology, Asia University, Taichung 413, Taiwan
6
Department of Chinese Pharmaceutical Sciences and Chinese Medicine Resources, College of Pharmacy, China Medical University, Taichung 404, Taiwan
7
Chinese Medicine Research Center, China Medical University, Taichung 404, Taiwan
*
Author to whom correspondence should be addressed.
These authors contributed equally to this work.
Molecules 2022, 27(2), 437; https://doi.org/10.3390/molecules27020437
Submission received: 6 December 2021 / Revised: 12 December 2021 / Accepted: 14 December 2021 / Published: 10 January 2022 / Corrected: 16 September 2022
(This article belongs to the Special Issue Natural Products from Medicinal Plants)

Abstract

:
Five new dimer compounds, namely Taiwaniacryptodimers A–E (15), were isolated from the methanol extract of the roots of Taiwania cryptomerioides. Their structures were established by mean of spectroscopic analysis and comparison of NMR data with those of known analogues. Their antifungal activities were also evaluated. Our results indicated that metabolites 1, 2, 4, and 5 displayed moderate antifungal activities against Aspergillus niger, Penicillium italicum, Candida albicans, and Saccharomyces cerevisiae.

1. Introduction

Taiwan cedar (Taiwania cryptomerioides Hayata), also known as Asia cedar, is an essential economic tree species native to Taiwan. It belongs to the same Mesozoic and Cenozoic Tertiary relics with Ginkgo biloba, Sequoiadendron giganteum, and Metasequoia glyptostroboides. It is a rare and precious tree species [1]. It belongs to the gymnosperm phylum, Coniferae, Coniferales, Taxodiaceae, Taiwania, one genus and one species. In 1904, the Japanese Prof. S. Konisi was first discovered in Nantou County, Taiwan. It was named by the botanist Prof. Hayata Bunzo in 1906 and named after Taiwan as its genus, “Taiwania”. The meaning of the species name “cryptomerioides” is “like Cryptomeria”. It can be seen that the morphological characteristics of Taiwan fir is similar to Cryptomeria japonica (L. f) D. Don. As far as the nature of the wood is concerned, Taiwan cedar is straight, delicate, and beautiful, with a light and soft texture, easy to process, and its heartwood has a beautiful yellow-red texture, which is quite distinctive. Weather resistance, decay resistance, and ant resistance are similar to those of cypress. It is a material with superior properties and is often used for construction, furniture, door panels, and thin panels. The fresh inner skin of Taiwan fir is mashed to apply it to poisonous snake bites. The leaves also have the effects of mashing juice and involving poison and are used for anti-inflammatory, diuretic, and gonorrhea treatment.
Taiwania cryptomerioides (Taxodiaceae) is taxonomically included in one genus and one species of endemic plants in Taiwan. It contains more than 6% of essential oil in its heartwood [1]. T. cryptomerioides is a vital building material with high value in Taiwan. Earlier phytochemical investigations of this plant mainly focused on its heartwood [2,3,4] and bark constituents [5,6,7,8,9] have also been found. In the past, interesting compounds isolated from the heartwood and bark of T. cryptomerioides and those with biological activity prompted us to study the chemical composition of their roots. Several kinds of sesquiterpenes with unique and novel structures have also been obtained from its roots [10,11,12,13,14]. However, compared with the composition of different parts of T. cryptomerioides in the past literature, it is found that there is very little research on the roots, and it is worth continuing to explore its composition. In this paper, we would like to report the five new dimers, namely, Taiwaniacryptodimers A–E (15), isolated from the roots of the T. cryptomerioides. The MeOH extract of the roots of T. cryptomerioides was suspended in H2O and partitioned between H2O and EtOAc. The EtOAc-soluble portion was subjected to repeated silica gel column chromatography and semipreparative normal phase-HPLC to afford compounds 15. Herein, the isolation and structure elucidation of five new compounds and their antifungal activity is described.

2. Results and Discussion

2.1. Structure Elucidation of Compounds

Compound 1 was isolated as gum with a specific rotation [α] D 30 = +131.7° (c 0.09, CHCl3). The HR-EI-MS of 1 gave a molecular ion at m/z 666.2828, establishing the molecular formula of 1 as C40H42O9, with 20 degrees of unsaturation. The EI-MS fragmental ions of 1 at m/z 350 [C20H14O6]+ and 316 [C20H28O3]+, as well as forty carbon signals found in the 13C NMR spectrum hinted that 1 was a dimeric diterpenoid (Figure 1). The UV maxima at 229, 284, and 314 nm suggested the presence of a benzoyl functionality. The absorption bands for hydroxyl (3582 cm−1), γ-lactone (1791 cm−1), and aromatic (1616, 1499 cm−1) groups were observed in its IR spectrum. The 1H and 13C NMR data of 1 (Table 1 and Table 2) exhibited signals for constituent upper monomer-1 (A): two tertiary methyl groups [δH 0.91 and 0.88 (each 3H, s, Me-18, and Me-19], an isopropyl group attached to a phenyl group [δH 1.20 (3H, d, J = 6,8 Hz, Me-16), 1.24 (3H, d, J = 6.8 Hz, Me-17) and 3.25 (1H, sept, J = 6.8 Hz, H-14)], one aromatic proton [δH 6.69 (1H, s, H-11)], and a typical downshifted Hβ-1 signal of a dehydroabietane diterpene [δH 1.77 (1H, m)]; a two set contiguous structural sequence was derived from COSY correlations [δH 1.50/1.77 (each 1H, m, CH2-1), 1.40/1.77 (each 1H, m, CH2-2), 1.23/1.38 (each 1H, m, CH2-3); 1.30 (1H, m, H-5), 1.80/1.96 (each 1H, m, CH2-6)], and a nonequivalent CH2 was observed [δH 2.50/3.29 (each 1H, d, J = 14.4 Hz, CH2-20]. Those data proved that the structure of constituent upper monomer-1 was related to demethylsalvicanol [15]. The 1H and 13C NMR data of 1 (Table 1) also exhibited another set of signals for constituent lower monomer-2 (B): two methylenedioxy groups (δH 5.94 (2H, s, C4′,5′-OCH2O-), 5.98/6.00 (each 1H, J =1.6 Hz, C4″,5″-OCH2O-) at two benzene moieties, respectively, and CH2 protons in a γ-position of a γ-lactone ring (δH 3.94 (1H, dd, J = 13.2, 2.8 Hz, H-9″), 4.81 (1H, dd, J = 13.2, 2.8 Hz, H-9″). Additionally, two ABX systems (6 H) of aromatic protons were observed (δH 6.91 (1H, d, J = 8.0 Hz, H-2′), 6.94 (1H, s, H-6′), 6.80 (1H, d, J = 8.0 Hz, H-3′), and δH 6.42 (1H, s, H-6″), 6.44 (1H, d, J = 8.0, H-2″), 6.73 (1H, d, J = 8.0 Hz, H-3″)), besides two benzylic protons (δH 5.06 (1H, s, H-7′), 6.47 (1H, s, H-7″)). The 13C-NMR spectrum and DEPT experiment showed 20 signals including a γ-lactone carbonyl C-atom (δC 171.7 (C-9′)), twelve aromatic C-atoms, and three CH2C 101.4 (C4′,5′-OCH2O-), 101.4 (C4″,5″-OCH2O-), 69.6 (C-9″)) and two CH groups (δC 77.4 (C-7′), 128.7 (C-7″)). The above NMR spectroscopic data of constituent lower monomer-2 are very similar to that of Taiwanin A [16], suggesting constituent lower monomer-2 was a lignanoid-derivative. Thus, the gross structure of 1 is composed of demethylsalvicanol and Taiwanin A. After calculating the degree of unsaturation, subtracting the above-inferred part, there is still one degree of unsaturation. The C-7′/C-12 and C-8′ and C-11 linkage of the two monomers in 1 was through a O-linkage functionality; judged by calculating the degree of unsaturation, subtracting the above inferred parts A and B, there is still one degree of unsaturation. Its molecular formula contains nine oxygen atoms and the downfield shift of H-7′ (δH 5.06) in constituent monomer-1, compared to that of the Taiwanin A analogues.
Compound 2 is also a gum with a specific rotation [α] D 30 = −26.2 (c 0.08, CHCl3). The HR-EI-MS of 2 also showed a molecular ion at m/z 666.2823, which corresponded to the molecular formula, C40H42O9, indicating 20 degrees of unsaturation. The EI-MS fragmental ions of 2 at at m/z 350 [C20H14O6]+ and 316 [C20H28O3]+, indicated that 2 was also a dimeric diterpenoid. The IR spectrum indicated the presence of hydroxyl (3576 cm−1), ester carbonyl (1791 cm−1), and aromatic (1616, 1499, 1447 cm−1) groups. The UV maxima at 229, 284, and 314 nm indicated a benzoyl functionality. Comparison of 1H and 13C NMR data of 1 and 2 (Table 1 and Table 2) showed that the signals of constituent upper monomer-1 of 2 were almost the same as those of 1; thus, the structure of constituents upper monomer-1 and lower monomer-2 were related to demethylsalvicanol and Taiwanin A, respectively.
Compounds 1 and 2 are speculated to be 9(10→20)abeoabietane type diterpenoids (demethylsalvicanol) combined with 8,8′-lignans (Taiwanin A). After calculating the degree of unsaturation, subtracting the above inferred part, there is still 1 degree of unsaturation. Therefore, the combination of the two monomer compounds should be adjacent to the oxygen atom and cyclized. The Z-configuration of the extra-cyclic olefinic proton at C-7″ was confirmed by the observation of the 1H-1H NOESY correlation between H-7″and H-9″ in compounds 13 (Table 3).
Compounds 1 and 2 are pure compounds obtained from different fractions, and their NMR spectra are very similar. The main difference between the two is that the optical rotation values are, respectively, positive ([α] D 30 = +131.7) and negative ([α] D 30 = −26.2). Although there are other chiral centers, the absolute configurations of Parts A and B have been confirmed according to the literature. Therefore, it can only be based on the large difference between the positive and negative values of the optical rotation value that the relative stereo configuration of the C-7′ position should be the opposite. Compounds 1 and 2 were a pair of C-7′ stereoisomerism. Therefore, we temporarily decided that the relative configuration at C-7′ of 1 is β-orientation. According to the reverse optical rotation value, the relative configuration at C-7 of 2 is proposed as α-form. However, the absolute configurations of Compounds 1 and 2 in C-7′ and C-8′ are uncertain. These data, supported by the 13C NMR (Table 2), DEPT, COSY (Table 3), HSQC, and HMBC (Table 3) spectra, were in agreement with a dimer system bearing two partial structures A and B. The structures of 1 and 2 were established as taiwaniacryptodimers A and B (rel-(3S,12aS,Z)-3-(benzo[d][1,3]dioxol-5-yl)-4′-(benzo[d][1,3]dioxol-5-ylmethylene)-12a-hydroxy-5-isopropyl-9,9-dimethyl-4′,5′,8,8a,9,10,11,12,12a,13-decahydro-2′H,3H,7H-spiro[benzo[5′,6′]cyclohepta[1′,2′:3,4]benzo[1,2-b][1,4]dioxine-2,3′-furan]-2′-one and rel-(3R,12aS,Z)-3-(benzo[d][1,3]dioxol-5-yl)-4′-(benzo[d][1,3]dioxol-5-ylmethylene)-12a-hydroxy-5-isopropyl-9,9-dimethyl-4′,5′,8,8a,9,10,11,12,12a,13-decahydro-2′H,3H,7H-spiro[benzo[5′,6′]cyclohepta[1′,2′:3,4]benzo[1,2-b][1,4]dioxine-2,3′-furan]-2′-one), respectively.
Compound 3 was obtained as an optically active colorless gum. [α] D 30 = +105.4 (c = 0.6, CHCl3). The molecular formula was determined as C40H40O9 based on the [M]+ peak at m/z 664.2668 (calcd. 664.2673 for C40H40O9) in its HR-EI-MS. UV absorptions (λmax bands at 227, 284, and 308 nm) confirmed the presence of a benzenoid nucleus. The IR spectrum revealed the presence of ester lactone (1791 cm−1), and aromatic rings (1618, 1498, and 1447 cm−1), respectively. Twenty-one degrees of insaturation were determined from the molecular formula, 13C-NMR (Table 1), and DEPT spectra. Because part of the all spectra data of 3 were similar to 1 and 2, it is inferred from the molecular formula and mass fragments that Compound 3 is also a dimer compound. From the 1H-NMR spectrum, there are isopropyl groups attached to the benzene ring (δH 1.24 (d, J = 6.8 Hz, H-17), 1.17 (d, J = 6.8 Hz, H-16), 3.27 (sept, J = 6.8 Hz, H-15), two singlet methyl groups (δH 0.81 (s, H-18), and 0.92 (s, H-19)).
The splitting of two groups of tri-substituted benzene ring ABX patterns [δH 6.82 (1H, d, J = 8.0 Hz, H-3′), 6.92 (1H, d, J = 8.0 Hz, H-2′), 6.94 (1H, s, H-6′), and δH 6.33 (1H, s, H-6″), 6.37 (1H, dd, J = 8.0, 1.6 Hz, H-2″), 6.74 (1H, d, J = 8.0 Hz, H-3″)], two -OCH2O- signals [δH 5.94 (2H, s, C4′,5′-OCH2O-) and 5.98/6.00 (each 1H, J =1.6 Hz, C4″,5″-OCH2O-)]. In conjunction with the 13C-NMR spectrum, there is a lactone signal at δC 171.4 (C-9′). From the above characteristics, we know that Compound 3 is similar to 1 and 2. The main difference is that the part A C-7 of 3 changes from a secondary carbon to an oxygenated tertiary carbon, which is a 9(10→20)abeoabietane diterpenoids combined with 8,8′-lignan. It can also be known from the IR spectrum that there is no absorption of hydroxyl groups. The C-7 and C-10 of the Part A form epoxide through the connection of oxygen atoms, which is also consistent with the calculated degree of unsaturation. Part A can be confirmed by comparison with the known compound brussonol (5,6-dihydroxysalviasperanol) [17,18].
The structure was further confirmed by 13C NMR (Table 1), DEPT, COSY (Table 3), and NOESY (Table 3) experiments. Thus, the structure of 3 was determined to be (3′S*,7′S*,8a′S*,12a′S*,Z)-3′-(benzo[d][1,3]dioxol-5-yl)-4-(benzo[d][1,3]dioxol-5-ylmethylene)-5′-isopropyl-9′,9′-dimethyl-4,5,7′,8′,8a′,9′,10′,11′,12′,13′-decahydro-2H,3′H-spiro[furan-3,2′-[7,12a]epoxybenzo[5′,6′]cyclohepta[1′,2′:3,4]benzo[1,2-b][1,4]dioxin]-2-one and was named Taiwaniacryptodimer C.
Compound 4 was isolated as a yellowish gum; its molecular formula C35H50O3 was established by 13C-NMR and HR-EI-MS data, and the eleven degrees of insaturation were determined from the molecular formula, the 13C-NMR spectrum, and the DEPT experiment (Table 1). Analysis of its IR spectrum suggested that 4 contains an OH group (3423 cm−1) and an aromatic moiety (1615, 1464 cm−1). The 13C- and 1H-NMR spectrum (Table 1) data together with the UV absorption bands at λmax 214 and 234 nm suggested that Compound 4 is very similar to hinokione [19].
The 1H NMR spectrum shows that there are two isopropyl groups [δH 1.14 (d, J = 6.8 Hz, H-16′), 1.23 (d, J = 6.8 Hz, H-17′)), 3.10 (sept, J = 6.8 Hz, H-15′)) and δH 0.75 ((d, J = 6.8 Hz, H-13), 0.94 (d, J = 6.8 Hz, H-12), 2.28 (m, H-11)], and one pentasubstituted benzene proton at δH 6.43 (s, H-14′), one terminal double bond at δH 4.77/4.93 (each s, CH2-14), 4 singlet methyls at δH 0.86 (s, CH3-19′), 1.04 (s, CH3-18′), 1.28 (s, CH3—20′), and 1.30 (s, CH3-15). The 13C NMR spectrum shows that 10 olefinic carbons are forming a benzene ring, a terminal double bond, a four-substituted double bond, and three oxygenated carbons at δC 78.7 (C-3′), 73.5 (C-5), 71.2 (C-4). From the above signals, it is inferred that it is a dimer formed by combining two monomers (A and B). Part A is a cadinane and Part B is an abietane skeleton.
Part B can be compared with the known compound hinokione: (1) C-3′ changes from a carbonyl group to a hydroxyl group, so the 13C NMR spectrum also shifts from δC 220.3 to 78.7 (C-3′). (2) Except for C-2′, 3′, 4′, 11′, 12′, which are affected by different functional groups, the 1H NMR and 13C NMR data have high similarity. After calculating the degree of unsaturation, subtracting the four unsaturations in Part A and six unsaturations in Part B, there is one unsaturation left. Therefore, the combination of two monomer compounds should be an adjacent dimer to the oxygen atom and cyclized. Based on further spectral data, the structure of 4 was established to be taiwaniacryptodimer D (rel-(3S,4aR,9aR,15S,15bS,16cS)-8,15-diisopropyl-4,4,9a,16c-tetramethyl-12-methylene-1,2,3,4,4a,5,6,9a,10,11,12,13,14,15,15b,16c-hexadecahydronaphtho[1,2-b]phenanthro[3,4-e][1,4]dioxin-3-ol).
Compound 5 was obtained as yellowish gum; it has the formula C35H50O4 according to the HR-EI-MS and 13C-NMR data. It has an IHD of 11 as deduced from its molecular formula. The IR spectrum shows absorptions for an OH group (3453 cm−1), a carbonyl group (17,121 cm−1), and an aromatic moiety (1464 and 1421 cm−1). The UV spectra of 5 confirmed the presence of an aromatic group (λmax 231 and 286 nm). The 1H NMR spectrum of 5 (Table 1) displayed resonances for two iPr moieties [δH 0.84 (d, J = 6.8 Hz, H-12), 0.94 (d, J = 6.8 Hz, H-13), 2.12 (m, H-11) and δH 1.16/1.16 (each 3H, d, J = 6.8 Hz, H-16′/17′), 3.14 (sept, J = 6.8 Hz, H-15′)], a trisubstituted double bond [δH 5.65(d(d, J = 2.0 Hz, H-5)], a five-substituted benzene ring [δH 6.48 (s, H-14′)], and five singlet methyl groups [δH 1.29 (s, CH3-15), 1.30 (s, CH3-14), 1.10 (s, CH3-19′), 1.15 (s, CH3-18′), 1.17 (s, CH3-20′)]. The 13C-NMR and DEPT experiments revealed that there is a carbonyl signal of δC 220.0 (C-3′), 8 olefinic carbons form a benzene ring and a trisubstituted double bond, and three oxygen-containing carbons at δC 69.5 (C-4), 75.4 (C-1), 75.8 (C-10). From the above signals, it is inferred that it is a dimer compound formed by combining two monomers. Part A is a cadinane, and B is an abietane compound. Part B can be compared with the known compound hinokione: except for C-1, 11, and 12, which are affected by different functional groups, the 1H NMR and 13C NMR spectra are very nearly the same. After calculating the degree of unsaturation, subtracting the seven unsaturations in Part B and three unsaturations in Part A, there is only one unsaturation left. Therefore, combining the two monomer compounds should be adjacent to the oxygen atom to cyclize to Compound 5. Finally, the 2D-NMR results are shown in Table 3. Consequently, Compound 5 was named taiwaniacryptodimer E (rel-(4aR,9aS,12R,14S,16aR,17cS)-12-hydroxy-8,14-diisopropyl-4,4,12,16a,17c-pentamethyl-1,4,4a,5,6,11,12,14,15,16,16a,17c-dodecahydro-10H-naphtho[1,8a-b]phenanthro[3,4-e][1,4]dioxin-3(2H)-one).

2.2. Biological Studies

The antifungal activities of the roots of Taiwania cryptomerioides were tested against the following fungi: Aspergillus niger (BCRC-31512), Penicillium italicum (BCRC-30567), Candida albicans (BCRC-21538), and Saccharomyces cerevisiae (BCRC-20822). The antifungal data are shown in Table 4 and clinically used antifungal agent, ketoconazole, was used as positive control.
Our results indicated that Metabolites 1, 2, 4, and 5 present moderate antifungal activities compared with ketoconazole, for which Compound 3 was weak. From the results of the antifungal tests, the following conclusions can be drawn regarding these isolates: (a) Among the novel, Dimers 1 and 2 showed antifungal activities with inhibition zones of 25, 20, 22, and 21; 20, 18, 17, and 25 mm against Aspergillus niger (BCRC-31512) Penicillium italicum (BCRC-30567), Candida albicans (BCRC-21538), and Saccharomyces cerevisiae (BCRC-20822), respectively. (b) The epoxide Dimer 3, taiwaniacryptodimer C (3), exhibited weak antifungal activities against Aspergillus niger (BCRC-31512) and Penicillium italicum (BCRC-30567) strains. (c) The other type Dimers 4 and 5, taiwaniacryptodimer D and E (4 and 5) indicated the effective inhibition zones of 20, 26, 19, and 20; 22, 12, 18, and 25 mm against Aspergillus niger (BCRC-31512) Penicillium italicum (BCRC-30567), Candida albicans (BCRC-21538), and Saccharomyces cerevisiae (BCRC-20822), respectively.
Compounds 1, 2, 4, and 5 were further tested for their inhibitory activity against A. niger, P. italicum, C. albicans, and S. cerevisiae by using a method as described in the experimental section (Table 5). Compound 1 was found to show inhibitory activity against A. niger strain with MIC value 54.87 μg/mL. Compounds 2 and 4 were found to show inhibitory activity against S. cerevisiae or P. italicum strain with MIC values 58.92 and 42.78 μg/mL. Compound 5 was also revealed to show inhibitory activity against A. niger and S. cerevisiae with MIC values of 62.86 and 56.32 μg/mL, respectively. Their bioactivity was weaker than reference compound ketoconazole (with MIC values of 3.25, 6.72, 11.79, and 3.16 μg/mL for A. niger, P. italicum, C. albicans, and S. cerevisiae, respectively). No antifungal activity (MIC > 100) was observed for Compound 3 at concentrations below 100 μg/mL in this bioassay.
Among 9(10→20)abeoabietane type diterpenoids combined with 8,8′-lignans series analogues 13, taiwaniacryptodimers C (3) (possess the C-7 and C-10 of the part A form epoxide through the connection of oxygen atoms exhibited less effective inhibition than their analogues, taiwaniacryptodimers A (1) and B (2). Compounds 1 and 2 are a pair of diastereomers, with little difference in activity. Compounds 4 and 5 are dimers that belong to the combination of abietane and cadinane skeleton compounds. It has been reported in the literature that the compounds in the heartwood of T. cryptomerioides have good anti-fungal and anti-wood-destroying fungus effects, which shows that the extracted components of T. cryptomerioides have the potential to be used as food additives or health-care medical supplies, etc. As for how to develop and utilize, further research and exploration are needed.

3. Materials and Methods

3.1. General Experimental Procedures

TLC: silica gel 60 F254 precoated plates (Merck, Darmstadt, German). Column chromatography (CC): silica gel 60 (70–230 or 230–400 mesh, Merck) and Spherical C18 100A Reversed Phase Silica Gel (RP-18) (particle size: 20–40 μm) (Silicycle, Quebec, Canada). HPLC: Spherical C18 column (250 × 10 mm, 5 μm) (Waters, Milford, MA, USA); LDC-Analytical-III apparatus. UV Spectra: Jasco UV-240 spectrophotometer; λmax (log ε) in nm. Optical rotation: Jasco DIP-370 polarimeter; in CHCl3. IR Spectra: Perkin-Elmer-2000 FT-IR spectrophotometer; ν in cm−1. 1H-, 13C- and 2D-NMR spectra were obtained utilizing a Varian-Mercury-500 and Varian-Unity-Plus-400 instrument and reported in CDCl3. 1H and 13CNMR chemical shifts are reported in ppm relative to either TMS (1H) (δ = 0 ppm, J in Hz) as an internal standard or the residual solvent peak as following: CDCl3 = 7.26 (1H NMR), CDCl3 = 77.0 (13C NMR). ESI and HRESIMS: Bruker APEX-II mass spectrometer; in m/z.

3.2. Plant Material

The roots of T. cryptomerioides were collected from Taichung, Taiwan, in August 1996. The plant was identified by Dr. Shang-Tzen Chang, Professor of the Department of Forestry, National Taiwan University. A voucher specimen (no. 013542) has been deposited in the Herbarium of the Department of Botany of the National Taiwan University, Taipei, Taiwan.

3.3. Isolation and Characterization of Secondary Metabolites

Air-dried roots of T. cryptomerioides (15 kg) were extracted three times with MeOH (150 L) at r.t. (7 days thrice). The methanol extract was concentrated, the brown residue suspended in H2O (7 L) and then extracted with EtOAc, and the EtOAc fraction (365 g) subjected to CC (silica gel, hexane/EtOAc of increasing polarity (H (100)→H: E (98:2)→H: E(97:3)→H: E (95:5)→H: E (90:10)→H: E (80:20)→H: E (70:30)→H: E (60:40)→H: E (50:50)→H: E (30:70)→E (100); then using EtOAc/Acetone of increasing polarity (E (100)→E:A (70: 30)) to give 13 fractions (1–13), and each product fraction further purified by HPLC. Fraction 6 (4.4 g) was applied to a silica gel column (230–400 mesh, 40 g), eluting with a gradient of n-hexane-EtOAc, to obtain 11 fractions (6-1-6-11). Fractions 6–8 (41 mg) were applied by HPLC (10% EtOAc/CH2Cl2) to obtain Taiwaniacryptodimer E (5; 4.7 mg). Fraction 7 (13.2 g) was chromatographed on a silica gel column (230–400 mesh, 650 g), eluting with CH2Cl2-acetone (10:1), to give 4 fractions: Fr. 7.1~7.4. Fr. 7.1 (18.1 g) was purified by semi-preparative HPLC (10% EtOAc/CH2Cl2, flow rate 2.5 mL/min) to yield Taiwaniacryptodimers A–D (14; 1.0, 1.0, 7.2, and 8.5 mg).
Taiwaniacryptodimer A (1): gum; [α ] D 30 = +131.7 (c 0.09, CHCl3); UV (MeOH): 229.0 (4.46), 284.0 (4.19), 314.0 (4.00) nm; IR (Neat): 3582 (-OH), 1790 (ester C=O), 1615, 1498 (benzene ring) cm−1; 1H NMR (500 MHz, CDCl3): see Table 1; 13C NMR (125 MHz, CDCl3): see Table 2); EIMS (70 eV) m/z (%):666 ([M]+, 2), 368 (8), 350 (64), 84 (100); HREIMS m/z 666.2828 [M]+ (calcd for C40H42O9, 666.2830).
Taiwaniacryptodimer B (2): gum; [α] D 30 = −26.2 (c 0.08, CHCl3); UV (MeOH): 229.0 (4.32), 284.0 (4.06), 314.0 (3.53) nm; IR (Neat): 3576 (-OH), 1791 (ester C=O), 1616, 1499 (benzene ring) cm−1; 1H NMR (500 MHz, CDCl3): see Table 1; 13C NMR (125 MHz, CDCl3): see Table 2); EIMS (70 eV) m/z (%):666 ([M]+, 5), 368 (8), 350 (98); HREIMS m/z 666.2823 [M]+ (calcd for C40H42O9, 666.2830).
Taiwaniacryptodimer C (3): gum; [α] D 30 = +105.4 (c 0.6, CHCl3); UV (MeOH): 227 (3.34), 284 (3.11), 309 (2.98) nm; IR (Neat): 1791 (ester C=O), 1618, 1498 (benzene ring) cm−1; 1H NMR (500 MHz, CDCl3): see Table 1; 13C NMR (125 MHz, CDCl3): see Table 2); EIMS (70 eV) m/z (%):666 ([M]+, 2), 350 (95), 316 (100), 151 (76); HREIMS m/z 666.2668 [M]+ (calcd for C40H40O9, 666.2673).
Taiwaniacryptodimer D (4): yellow gum; [α] D 30 = −1.3 (c 0.71, CHCl3); UV (MeOH): 214 (2.96), 234 (3.07) nm; IR (Neat): 3423 (OH), 1678 (terminal double bond), 1615, 1464 (benzene ring) cm−1; 1H NMR (500 MHz, CDCl3): see Table 1; 13C NMR (125 MHz, CDCl3): see Table 2); EIMS (70 eV) m/z (%): 518 ([M]+, 50), 202 (100), 159 (79), 73 (52); HREIMS m/z 518.3758 [M]+ (calcd for C35H50O3, 518.3762).
Taiwaniacryptodimer E (5): yellow gum; [α] D 30 = +19.6 (c 0.39, CHCl3); UV (MeOH): 231 (4.10), 286 (3.42) nm; IR (Neat): 3453 (OH), 1712 (ketone), 1464, 1421 (benzene ring) cm−1; 1H NMR (500 MHz, CDCl3): see Table 1; 13C NMR (125 MHz, CDCl3): see Table 2); EIMS (70 eV) m/z (%): 534 ([M]+, 85), 516 (18), 220 (70), 205 (100), 202 (98); HREIMS m/z 534.3703 [M]+ (calcd for C35H50O4, 534.3711).

3.4. Antifungal Activity Assays

Test microorganisms. The in vitro antifungal activity of Compounds 15 were tested against a panel of laboratory control strains belonging to the Bioresource Collection and Research Center (BCRC), Hsinchu, Taiwan: fungal organisms Aspergillus niger (BCRC-31512), Penicillium italicum (BCRC-30567), Candida albicans (BCRC-21538), and Saccharomyces cerevisiae (BCRC-20822).

3.4.1. By Disc Diffusion Assay

The antifungal susceptibility test of the isolated compounds was performed with the following strains: Aspergillus niger, Penicillium italicum, Candida albicans, and Saccharomyces cerevisiae by the disc diffusion method and applied following the CLSI M44-A, M44-S2 (for yeasts) [20,21], and M-51P (for filamentous fungi) guideline [22]. A standard disk of ketoconazole was used as a positive control, while the disk imbued with 50 μL of pure DMSO was used as a negative control. The diameters of the inhibition zones were measured in millimeters and means of a slide caliper. Each test was performed in triplicate and repeated three times, and results were analyzed for statistical significance [20,21,22].

3.4.2. By Broth Dilution Assay

The MIC determination for the antifungal assay was performed according to the CLSI (Clinical and Laboratory Standard Institute) using the broth dilution assay methods [23,24,25]. Extract stock solutions and partitions were prepared in 5% DMSO, and twofold serial dilutions were prepared in RPMI in 96-well microtiter plates (Corning Incorporated, Corning, NY, USA). The final concentrations ranged from 0.98 to 2.000 g mL−1. Test organisms (100 μL) were added to each well in the microtiter plates. The growth control contained medium and inoculum. Blank controls contained medium only. The microtiter plates were then incubated at 35 °C and the endpoints were read after 48 h. The lowest concentration for each test compound at which color change occurred was recorded as its primary MIC value. The average of primary values from three individual tests were calculated, and that was taken as the final MIC value for each of the test compounds.

4. Conclusions

The research object of this research material Taiwania cryptomerioides (Taxodiaceae) is taxonomically included in one genus and one species of endemic plants in Taiwan. It contains more than 6% of essential oil in its heartwood. T. cryptomerioides is an important building material with high value in Taiwan. Previously, we investigated the chemical components of the heartwood and bark of this plant because of its antifungal and decayresistant characteristics as well as of its beautiful yellowish-red color with distinct purplish-pink streaks. The interesting compounds and those conferring biological activities isolated from the heartwood and bark of T. cryptomerioides prompted us to study the chemical components of its roots. In this study, we explored one novel constituent from the roots that had not been published in the past and evaluated and screened the metabolites for antifungal activity. It is found that the new dimer skeleton components 1 and 2 have moderate antifungal activity, one epoxide dimer 3 has weak activity, and two diterpenes 4 and 5 also possess moderate antifungal activities. The unique structure and antifungal activity of those have activities that make it an interesting material for further development.

Author Contributions

Y.-H.K. is responsible for the main research framework; Y.-H.K. and M.-J.C. designed the research; C.-F.C. performed the chemical and structure elucidation research; C.-L.C., M.-D.W. and H.-S.C. conducted antifungal assays, Y.-H.K. and M.-J.C. helped with structure elucidation, Y.-H.K. and M.-J.C. organized the data and M.-J.C. wrote the paper. All authors have read and agreed to the published version of the manuscript.

Funding

This work was financially supported by China Medical University grant in Taiwan (10959189 and CMU109-AWARD-02) and “Chinese Medicine Research Center, China Medical University” from The Featured Areas Research Center Program within the framework of the Higher Education Sprout Project by the Ministry of Education (MOE) in Taiwan (CMRC-CHM-2-1). This work was partial kindly supported by the Food Industry Research and Development Institute (FIRDI) and supported by Ministry of Science and Technology, R.O.C. (MOST-108-2320-B-080-002- & 110-2320-B-080-001-).

Data Availability Statement

Not applicable.

Acknowledgments

The authors thank Senior Technician Chyi Jia Wang of Center for Resources, Research and Development (CRRD) of Kaohsiung Medical University for measuring the 2D NMR data.

Conflicts of Interest

The authors declare no conflict of interest.

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Figure 1. Compounds 15, isolated from the roots of Taiwania cryptomerioides.
Figure 1. Compounds 15, isolated from the roots of Taiwania cryptomerioides.
Molecules 27 00437 g001
Table 1. 1H NMR data for compounds 15 in CDCl3 (δ in ppm, J in Hz, 500 MHz in CDCl3).
Table 1. 1H NMR data for compounds 15 in CDCl3 (δ in ppm, J in Hz, 500 MHz in CDCl3).
No12345
Part A
11.50 (m),
1.77 (m)
1.36 (m),
1.72 (m)
1.78 (m),
1.96 (m)
21.40 (m),
1.77 (m)
1.37 (m),
1.70 (m)
1.57 (m),
1.79 (m)
2.20 (m),
2.40 (m)
1.81 (m)
31.23 (m),
1.38 (m)
1.23 (m),
1.49 (m)
1.50 (m),
1.11 (m)
1.62 (dt, J = 13.2, 6.0)
2.04 (dt, J = 13.2, 6.0)
1.70 (m),
2.81 (m)
4
51.30 (m)1.28 (m)1.80 (m)4.28 (s)5.65 (d, J = 2.0)
61.80 (m),
1.96 (m)
1.80 (m),
1.99 (m)
1.91 (m),
2.12 (m)
72.69 (m),
2.79 (m)
2.70 (m),
2.77 (m)
4.89 (br. d, J = 6.4),
2.77 (m)
2.40 (m)2.22 (br d,
J = 13.2)
8 1.25 (m),
1.51 (m)
1.80 (m),
1.65 (m)
9 2.20 (m),
2.40 (m)
1.41 (m),
1.74 (m)
10
11 2.28 (m)2.12 (m)
12 0.94 (d, J = 6.8)0.84 (d, J = 6.8)
13 0.75 (d, J = 6.8)0.94 (d, J = 6.8)
146.69 (s)6.64 (s)6.60 (s)4.77 (s),
4.93 (s)
1.30 (s)
153.25 (sept, J = 6.8)3.25 (sept, J = 6.8)3.27 (sept, J = 6.8)1.30 (s)1.29 (s)
161.20 (d, J = 6.8)1.21 (d, J = 6.8)1.17 (d, J = 6.8)
171.24 (d, J = 6.8)1.18 (d, J = 6.8)1.24 (d, J = 6.8)
180.88 (s)0.88 (s)0.81 (s)
190.91 (s)0.91 (s)0.92 (s)
202.50/3.29 (each d, J = 14.4)2.50/3.29 (each d, J = 14.4)2.48/2.77 (each d, J = 17.0)
Part B
1′ 1.37 (m)
3.17 (dt, J = 13.6, 3.6)
2.02 (ddd, J = 13.2, 11.2, 2.8)
2.92 (dt, J = 13.2, 8.8)
2′6.91 (d, J = 8.0)6.91 (dd, J = 8.0, 1.6)6.92 (d, J = 8.0)1.71 (m)2.30 (m)
2.73 (m)
3′6.80 (d, J = 8.0)6.81 (d, J = 8.0)6.82 (d, J = 8.0)3.27 (dd, J = 9.0, 6.8)
4′
5′ 1.24 (m)2.11 (m)
6′6.94 (s)6.94 (s)6.94 (s)1.55 (m)
1.78 (m)
1.68 (m)
1.74 (m)
7′5.06 (s)5.05 (s)5.12 (m)2.78 (m)2.80 (m)
8′
9′
10′
11′
12′
13′
14′ 6.43 (s)6.48 (s)
15′ 3.10 (sept, J = 6.8)3.14 (sept, J = 6.8)
16′ 1.14 (d, J = 6.8)1.16 (d, J = 6.8)
17′ 1.23 (d, J = 6.8)1.16 (d, J = 6.8)
18′ 1.04 (s)1.15 (s)
19′ 0.86 (s)1.10 (s)
20′ 1.28 (s)1.17 (s)
1″
2″6.44 (d, J = 8.0)6.42 (d, J = 8.0)6.37 (dd, J = 8.0, 1.6)
3″6.73 (d, J = 8.0)6.73 (d, J = 8.0)6.74 (d, J = 8.0)
4″
5″
6″6.42 (s)6.41 (s)6.33 (s)
7″6.47 (s)6.44 (s)6.35 (br. s)
8′;
9″3.94/4.81 (each dd, J = 13.2, 2.8)3.90 (dd, J = 13.2, 2.8),
4.77 (dd, J = 13.2, 1.6)
3.90 (dd, J = 13.6, 2.4),
4.74 (dd, J = 13.6, 2.4)
4′,5′-OCH2O-5.94 (s)5.94 (s)5.94 (s)
4″,5″-OCH2O-5.97 (d, J = 1.6)
5.99 (d, J = 1.6)
5.98 (d, J = 1.6)
6.01 (d, J = 1.6)
5.98 (d, J = 1.6)
6.00 (d, J = 1.6)
Table 2. 13C NMR data for compounds 15 (δ in ppm, 125 MHz for 13C NMR in CDCl3).
Table 2. 13C NMR data for compounds 15 (δ in ppm, 125 MHz for 13C NMR in CDCl3).
No12345
A
142.142.230.3133.275.4
218.818.716.024.324.6
342.442.531.629.834.4
434.334.431.871.269.5
558.158.250.773.5133.3
623.823.840.0134.9137.7
736.036.275.942.042.1
8122.1122.1134.722.321.5
9137.2138.5118.930.832.5
1070.971.280.1144.675.8
11141.8140.5140.621.026.1
12137.3138.0137.620.117.0
13134.7134.7134.017.022.2
14119.0118.2114.6108.423.0
1526.927.026.822.616.8
1622.722.823.1
1722.122.321.7
1821.621.726.9
1932.232.230.4
2040.640.538.8
Part B
1′127.2127.1126.935.637.1
2′107.6108.4107.528.334.2
3′108.5108.5108.478.7220.0
4′148.0147.9147.739.347.2
5′148.3148.3148.3752.551.8
6′121.1121.40121.1619.120.7
7′77.476.9276.8632.531.9
8′78.679.0878.78127.5127.6
9′171.7171.50171.39123.4135.0
10′ 39.037.9
11′ 139.8138.4
12′ 137.4136.9
13′ 134.2132.3
14′ 118.3118.1
15′ 26.826.8
16′ 22.222.2
17′ 22.422.4
18′ 28.628.8
19′ 15.919.7
20′ 20.121.8
1″129.6129.6129.9
2″108.4108.4108.3
3″108.5108.5108.4
4″147.9147.9147.9
5″147.7147.9147.9
6″123.2123.1123.2
7″128.7128.6128.4
8″129.1129.1128.8
9″69.669.669.6
4′,5′-OCH2O-101.4101.4101.4
4″,5″-OCH2O-101.4101.4101.4
Table 3. 2D-NMR data for compounds 15 in CDCl3 (δ in ppm, J in Hz, 500 MHz in CDCl3).
Table 3. 2D-NMR data for compounds 15 in CDCl3 (δ in ppm, J in Hz, 500 MHz in CDCl3).
No1234 5
Part ACOSYHMBCNOESYCOSYHMBCNOESYCOSYHMBCNOESYCOSYHMBCNOESYCOSYHMBCNOESY
122, 32 (eq)22, 32 (eq)22, 3, 102 (eq)
21, 34, 103 (eq)1, 34, 103 (eq)1, 3 3 (eq)33143315
321, 51821, 51821, 2, 5182122215
4
56 6 6 3, 6, 7, 15, 11′3 1, 6, 711, 12, 13
675, 7, 81975, 7, 81975, 7, 819
76 146 146 6 (eq), 148, 1118, 11 1, 11, 12, 138, 12
8 7, 96, 107 (eq) 6, 99
9 81014 1, 88
10
11 7, 12, 136 7, 12, 13
12 117 117
13 117 117
14 7, 13, 157, 15, 16 7, 13, 157, 15, 16 7, 13, 157, 15, 16 1, 9, 109 (eq) 1, 92
1516, 1712, 14 16, 1712, 14 16, 1712, 14 3, 5 52, 3
1615 1515 1515 15
17161315161315161315
18 3, 5 3, 5 3, 5
19 5 5 5
20 5, 8, 9, 10, 11 5, 8, 9, 10, 11 1, 5, 8, 9, 10, 115
Part B
1′ 2′2′ 2′2′20′
2′ 1′ 1′, 3′, 19′, 20′1′3′, 10′
3′ 2′2′, 4′
4′
5′6′ 6′ 6′ 6′3′, 7′, 10′3′, 6′6′20′6′
6′5′7′ 5′7′ 5′7′ 5′, 7′ 5′, 7′, 19′5′, 7′7′, 8′, 10′
7′ 2′, 8′, 8″2′ 2′, 8′, 12′, 8″2′ 2′, 8′, 12′, 8″2′ 5′, 6′, 8′, 14′6′, 14′ 6′, 9′
8′
9′
10′
11′
12′
13′
14′ 9′, 12′, 15′7′, 17′ 7′, 12′, 13′, 15′17′
15′ 16′, 17′16′, 17′ 16′, 17′
16′ 15′13′ 15′
17′ 15′13′14′15′
18′ 3′, 5′3′ 3′, 4′, 5′, 19′5′
19′ 3′, 5′2′, 6′, 20′ 3′, 4′, 18′6′
20′ 1′, 5′, 10′2′, 19′ 5′, 9′
1″
2″
3″
4″
5″6″ 6″ 6″
6″5″ 5″ 5″
7″ 2″, 6″, 8″9″ 2″, 6″, 8″9″ 2″, 6″, 8″9″
8′;
9″ 2′ 2′ 2′
4′,5′-OCH2O-
4″,5″-OCH2O-
Table 4. Antifungal activity of five sufficient compounds isolated from the roots of Taiwania cryptomerioides (diameter of the zone of growth inhibition fungicidal zone in mm, including the diameter of the disc, 8 mm).
Table 4. Antifungal activity of five sufficient compounds isolated from the roots of Taiwania cryptomerioides (diameter of the zone of growth inhibition fungicidal zone in mm, including the diameter of the disc, 8 mm).
Test MicroorganismIsolated Compounds
12345Ketoconazole
A. niger25.2 ± 0.220.2 ± 1.912 ± 2.920 ± 1.822.5 ± 2.232 ± 1.2
P. italicum20.0 ± 0.218.2 ± 1.611.4 ± 2.226.3 ± 1.112.3 ± 0.330 ± 1.4
C. albicans22.2 ± 0.217.0 ± 0.219 ± 2.218.0 ± 1.330 ± 5.4
S. cerevisiae21.2 ± 1.825.1 ± 1.220 ± 1.324.9 ± 1.433 ± 1.8
Inhibition zone diameter (mm); – = no Inhibition zone; Positive control (STD): ketoconazole, Each value represents the mean ± SD.
Table 5. MIC values of compounds 15 in μg/mL against four fungi strains.
Table 5. MIC values of compounds 15 in μg/mL against four fungi strains.
CompoundsA. nigerP. italicumC. albicansS. cerevisiae
154.87 ± 6.13 a>100>100>100
2>100>100>10058.92 ± 9.30 a
3>100>100>100>100
4>10042.78 ± 5.23 a>100>100
562.86 ± 8.04 a>100>10056.32 ± 13.19 a
Ketoconazole3.25 ± 1.48 a6.72 ± 2.23 a11.79 ± 4.81 a3.16 ± 1.51 a
a Each value represents the mean ± SD.
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Cheng, M.-J.; Wu, M.-D.; Chang, C.-L.; Chang, H.-S.; Chyu, C.-F.; Kuo, Y.-H. Novel Antifungal Dimers from the Roots of Taiwania cryptomerioides. Molecules 2022, 27, 437. https://doi.org/10.3390/molecules27020437

AMA Style

Cheng M-J, Wu M-D, Chang C-L, Chang H-S, Chyu C-F, Kuo Y-H. Novel Antifungal Dimers from the Roots of Taiwania cryptomerioides. Molecules. 2022; 27(2):437. https://doi.org/10.3390/molecules27020437

Chicago/Turabian Style

Cheng, Ming-Jen, Ming-Der Wu, Chao-Lin Chang, Hsun-Shuo Chang, Chiou-Fung Chyu, and Yueh-Hsiung Kuo. 2022. "Novel Antifungal Dimers from the Roots of Taiwania cryptomerioides" Molecules 27, no. 2: 437. https://doi.org/10.3390/molecules27020437

APA Style

Cheng, M. -J., Wu, M. -D., Chang, C. -L., Chang, H. -S., Chyu, C. -F., & Kuo, Y. -H. (2022). Novel Antifungal Dimers from the Roots of Taiwania cryptomerioides. Molecules, 27(2), 437. https://doi.org/10.3390/molecules27020437

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