Untargeted Metabolomic Analysis and Chemometrics to Identify Potential Marker Compounds for the Chemical Differentiation of Panax ginseng, P. quinquefolius, P. notoginseng, P. japonicus, and P. japonicus var. major
Abstract
:1. Introduction
2. Results and Discussion
2.1. Optimization of a UPLC-QTOF-MS Approach for the Enhanced Profiling and Characterization of Metabolites Simultaneously from RS, XYS, SQ, ZJS, and ZZS
2.2. Multivariate Analysis for UPLC-QTOF-MS Results and Selection of Target Ion
3. Materials and Methods
3.1. Reagents and Material
3.2. Sample Preparation
3.3. UPLC/QTOF-MS Analysis
3.4. Multivariate Analysis
4. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Sample Availability
Abbreviations List
VIP | variable importance in projection |
RS | P. ginseng |
XYS | P. quinquefolius |
SQ | P. notoginseng |
ZJS | P. japonicus |
ZZS | P. japonicus var. major |
TCM | traditional Chinese medicine |
PPD | protopanaxadiol |
PPT | protopanaxatriol |
OCT | ocotillol |
OA | oleanane |
PCA | principal component analysis |
PLS-DA | supervised principal component analysis |
OPLS-DA | orthogonal partial least squares discrimination analysis |
HCA | hierarchical clustering analysis |
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NO. | Ion Mode | Adducts | VIP | tR (min) | Observed m/z | Error ppm | Formula | Identification | RS | XYS | ZJS | ZZS | SQ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | + | M+H | 5.43 | 0.49 | 175.1173 | 9 | C6H14N4O2 | L-Arginine | + | ++ | + | + | + |
2 | - | M-H | 4.82 | 0.6 | 387.1074 | 3 | C20H20O8 | 5-Hydroxy-3,3′,4′,7,8-pentamethoxyflavone | + | + | + | + | - |
3 | - | M-H | 5.94 | 0.61 | 341.1003 | 8 | C19H18O6 | Tetramethoxyluteolin | + | + | ++ | +++ | + |
4 | + | M+H-2H2O | 5.95 | 0.64 | 360.1462 | 2 | C19H25NO8 | Ethyl 2-hydroxy-3-(3-indolyl)propanoate glucoside | + | ++ | + | + | ++ |
5 | + | M+NH4 | 5.02 | 2.41 | 372.1857 | 2 | C14H26O10 | Isopropyl apiosylglucoside | - | - | + | + | - |
6 | + | / | 9.69 | 2.81 | 322.2084 | / | / | Unknown 1 | + | + | +++ | + | - |
7 | + | / | 8.56 | 2.94 | 386.1982 | / | / | Unknown 2 | - | - | ++ | - | - |
8 | + | / | 9.72 | 3.07 | 363.169 | / | / | Unknown 3 | ++ | + | + | ++ | +++ |
9 | + | / | 4.35 | 3.68 | 400.2183 | / | / | Unknown 4 | - | + | - | - | - |
10 | + | M+CH3OH+H | 5.67 | 3.82 | 579.2993 | 3 | C26H42O12 | Canavalioside | + | + | + | + | - |
11 | + | M+H | 4.42 | 4.42 | 407.2007 | 14 | C22H30O7 | 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol | + | - | + | ++ | + |
12 | + | M+NH4-H2O | 6.08 | 4.65 | 381.1834 | 7 | C15H27NO10 | Pantothenic acid 4′-O-b-D-glucoside | - | - | - | - | + |
13 | + | M+H-2H2O | 8.07 | 4.78 | 365.1871 | 0 | C22H28N2O5 | Rotundifoline | - | - | - | - | ++ |
14 | - | / | 5.31 | 4.78 | 262.1171 | / | / | Unknown 5 | - | - | - | - | ++ |
15 | - | M-H | 4.08 | 5.5 | 961.5382 | 0 | C48H82O19 | Ginsenoside M6a | - | - | - | - | + |
16 | - | M-H | 7.73 | 5.63 | 931.5192 | 9 | C47H80O18 | Notoginsenoside R1 | - | - | - | - | +++ |
17 | + | M+H | 8.57 | 5.73 | 817.4825 | 15 | C42H72O15 | Majonoside R1 | - | - | + | ++ | - |
18 | - | M-H | 4.91 | 5.83 | 799.4801 | 5 | C42H71O14 | Ginsenoside Rg1 | - | - | - | - | ++ |
19 | - | / | 7.13 | 5.88 | 991.5361 | / | / | Unknown 6 | ++ | +++ | + | ++ | - |
20 | - | M+FA-H | 4.91 | 6.05 | 845.4891 | 2 | C43H75O15 | Ginsenoside Rg2 | - | - | - | + | + |
21 | + | M+NH4 | 7.29 | 6.06 | 904.5162 | 11 | C45H74O17 | Melongoside G | + | - | + | - | + |
22 | + | M+ACN+Na | 6.57 | 6.31 | 580.3255 | 2 | C30H44O7 | Ganoderic acid | - | - | + | + | - |
23 | + | / | 8.5 | 6.8 | 817.4781 | / | / | Unknown 7 | - | - | ++ | ++ | - |
24 | - | M+Hac-H | 8.03 | 6.81 | 861.4695 | 18 | C41H70O15 | Vinaginsenoside R14 | - | - | +++ | ++ | - |
25 | + | M+2ACN+H | 4.01 | 7 | 1259.6813 | 22 | C57H92O25 | Asterlingulatoside D | + | - | - | - | + |
26 | - | M-H | 4.46 | 7.03 | 1239.6458 | 6 | C59H100O27 | Ginsenoside Ra3 | - | - | - | - | + |
27 | + | M+2H | 5.6 | 7.16 | 563.3038 | 4 | C54H92O24 | Koryoginsenoside Rg2 | - | - | + | + | - |
28 | - | M+FA-H | 8.19 | 7.16 | 845.4742 | 19 | C43H75O15 | Ginsenoside Rf | +++ | +++ | + | + | - |
29 | - | M-H | 4.48 | 7.3 | 769.4709 | 5 | C41H70O13 | Ginsenoside F3 | - | - | - | - | + |
30 | - | M+F | 4.53 | 7.35 | 1193.5899 | 25 | C56H90O27 | Agavasaponin D | ++ | ++ | + | + | - |
31 | + | M+NH4 | 4.08 | 7.44 | 1126.6355 | 1 | C54H92O23 | Ginsenoside Rb1 | - | + | - | - | + |
32 | - | M-H | 4.06 | 7.65 | 783.4876 | 3 | C42H72O13 | Ginsenoside Rg3 | - | - | - | - | + |
33 | - | M+Na-2H | 5.31 | 7.82 | 925.4683 | 10 | C45H76O18 | Torvoside | - | - | + | + | - |
34 | + | M+NH4 | 5.11 | 8.13 | 1168.6486 | 1 | C56H94O24 | Quinquenoside R1 | - | + | - | - | - |
35 | - | / | 6.36 | 8.13 | 793.4239 | / | / | Unknown 8 | - | - | ++ | ++ | - |
36 | - | M+Hac-H | 6.35 | 8.36 | 1031.5343 | 27 | C48H76O20 | Calendasaponin B | ++ | + | + | - | - |
37 | + | M+NH4 | 5.02 | 8.43 | 964.582 | 2 | C48H82O18 | Ginsenoside B2 | - | + | - | - | + |
38 | - | M-H | 7.22 | 8.45 | 945.5336 | 9 | C48H81O18 | Ginsenoside Rd | - | - | - | - | +++ |
39 | + | / | 4.69 | 8.66 | 1050.5853 | / | / | Unknown 9 | + | - | - | - | + |
40 | + | M+NH4 | 5.47 | 10.32 | 330.2622 | 5 | C18H32O4 | octadec-9-enedioic acid | + | + | - | - | + |
41 | + | M+NH4 | 5.35 | 10.88 | 316.2813 | 10 | C18H34O3 | 12-Hydroxyoctadec-9-enoic acid | ++ | - | + | - | + |
42 | - | M-H+HCOONa | 4.58 | 11.78 | 295.2235 | 7 | C15H32O | Pentadecanol | + | + | - | - | - |
43 | + | / | 5.51 | 12.1 | 622.3771 | / | C36H60O8 | Ginsenoside Rh4 | + | + | - | - | + |
44 | + | M+H | 4.07 | 12.37 | 496.3377 | 4 | C24H50NO7P | 1-Palmitoylphosphatidylcholine | + | + | + | + | - |
45 | + | / | 6.69 | 14.64 | 378.2217 | / | / | Unknown 10 | - | - | ++ | ++ | - |
46 | - | M-H | 4.33 | 15.07 | 271.2245 | 12 | C16H32O3 | Hydroxyhexadecanoic acid | + | - | - | - | + |
47 | + | M+H | 9.95 | 15.32 | 380.236 | 7 | C23H29N3O2 | 4-Isopropylphenserine | - | + | +++ | ++ | - |
48 | - | M-H+HCOONa | 5.25 | 15.79 | 279.2294 | 4 | C15H32 | Pentadecane | + | + | + | + | ++ |
49 | - | / | 6.46 | 16.82 | 833.5103 | / | / | Unknown 11 | - | - | ++ | +++ | - |
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Ji, R.; Garran, T.A.; Luo, Y.; Cheng, M.; Ren, M.; Zhou, X. Untargeted Metabolomic Analysis and Chemometrics to Identify Potential Marker Compounds for the Chemical Differentiation of Panax ginseng, P. quinquefolius, P. notoginseng, P. japonicus, and P. japonicus var. major. Molecules 2023, 28, 2745. https://doi.org/10.3390/molecules28062745
Ji R, Garran TA, Luo Y, Cheng M, Ren M, Zhou X. Untargeted Metabolomic Analysis and Chemometrics to Identify Potential Marker Compounds for the Chemical Differentiation of Panax ginseng, P. quinquefolius, P. notoginseng, P. japonicus, and P. japonicus var. major. Molecules. 2023; 28(6):2745. https://doi.org/10.3390/molecules28062745
Chicago/Turabian StyleJi, Ruifeng, Thomas Avery Garran, Yilu Luo, Meng Cheng, Mengyue Ren, and Xiuteng Zhou. 2023. "Untargeted Metabolomic Analysis and Chemometrics to Identify Potential Marker Compounds for the Chemical Differentiation of Panax ginseng, P. quinquefolius, P. notoginseng, P. japonicus, and P. japonicus var. major" Molecules 28, no. 6: 2745. https://doi.org/10.3390/molecules28062745
APA StyleJi, R., Garran, T. A., Luo, Y., Cheng, M., Ren, M., & Zhou, X. (2023). Untargeted Metabolomic Analysis and Chemometrics to Identify Potential Marker Compounds for the Chemical Differentiation of Panax ginseng, P. quinquefolius, P. notoginseng, P. japonicus, and P. japonicus var. major. Molecules, 28(6), 2745. https://doi.org/10.3390/molecules28062745