A Functional Variant of NEDD4L Is Associated with Obesity and Related Phenotypes in a Han Population of Southern China
Abstract
:1. Introduction
2. Results and Discussion
2.1. Association Analysis of Genetic Variants in NEDD4L with Overweight/Obesity
2.2. Analysis of Obesity Related Phenotypes and Genotypes at Genetic Variants in NEDD4L
3. Experimental Section
3.1. Ethics Statement
3.2. Subjects
3.3. Measurements
3.4. SNP Selection and Genotyping
3.5. Statistical Analyses
4. Conclusions
Supplementary Information
ijms-14-07433-s001.docAcknowledgments
Conflict of Interest
References
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dbSNP ID | Allele | Present study | HCB a,b | Japanese b | Caucasians b | Blacks b |
---|---|---|---|---|---|---|
Rs4149601 | G | 1369 (79.1%) | 80.0% | 87.5% | 63.3% | 63.3% |
A | 361 (20.9%) | 20.0% | 12.5% | 36.7% | 36.7% | |
Rs3865418 | C | 1129 (34.7%) | 64.4% | 76.7% | 55.0% | 32.5% |
T | 615 (35.3%) | 35.6% | 23.3% | 45.0% | 67.5% | |
Rs2288774 | T | 1071 (61.1%) | 67.8% | 69.3% | 48.3% | 33.3% |
C | 683 (38.9%) | 32.2% | 30.7% | 51.7% | 66.7% |
dbSNP ID | Allele major/minor | MAF a | Pb/Pc | |
---|---|---|---|---|
Control | Case | |||
Rs2288774 | T/C | 38.7% | 39.6% | 0.70/NS d |
Rs3865418 | C/T | 34.3% | 37.6% | 0.18/NS d |
Rs4149601 | G/A | 23.1% | 15.3% | 0.0002/0.0006 |
dbSNP ID | Genotype | n (%) | OR (95%CI) a | OR (95%CI) b | Pa/Pb | |
---|---|---|---|---|---|---|
Controls | Cases | |||||
Rs2288774 | TT | 234 (37.4%) | 96 (38.2%) | 1.00 | 1.00 | |
TC | 300 (47.9%) | 111 (44.2%) | 0.96 (0.71–1.30) | 0.95 (0.70–1.29) | 0.81/0.73 | |
CC | 92 (14.7%) | 44 (17.5%) | ||||
Rs3865418 | CC | 266 (42.8%) | 99 (39.4%) | 1.00 | 1.00 | |
CT | 284 (45.7%) | 115 (45.8%) | 1.15 (0.85–1.55) | 1.14 (0.84–1.55) | 0.36/0.39 | |
TT | 71 (11.4%) | 37 (14.7%) | ||||
Rs4149601 | GG | 367 (59.6%) | 185 (74.3%) | 1.00 | 1.00 | |
GA | 213 (34.6%) | 52 (20.9%) | 0.51 (0.37–0.71) | 0.52 (0.37–0.74) | <0.0001/<0.0001 | |
AA | 36 (5.8%) | 12 (4.8%) |
Phenotypes | Genotype | n (%) | Mean ± SD | Estimate a (95%CI) | p-value |
---|---|---|---|---|---|
Height, cm | GG | 552 (63.8%) | 161.04 ± 0.40 | −0.50(−1.49 to 0.49) | 0.33 |
GA | 265 (30.6%) | 161.24 ± 0.54 | |||
AA | 48 (5.6%) | 161.02 ± 1.58 | |||
Weight, kg | GG | 552 (63.8%) | 56.35 ± 0.50 | −2.60(−4.01 to −1.19) | 0.0003 |
GA | 265 (30.6%) | 54.40 ± 0.68 | |||
AA | 48 (5.6%) | 54.19 ± 1.52 | |||
Waist, cm | GG | 552 (63.8%) | 81.66 ± 0.47 | −2.78(−4.29 to −1.28) | 0.0015 |
GA | 265 (30.6%) | 79.17 ± 0.68 | |||
AA | 48 (5.6%) | 78.81 ± 1.61 | |||
BMI, kg/m2 | GG | 552 (63.8%) | 23.42 ± 0.19 | −0.97(−1.56 to −0.38) | 0.0012 |
GA | 265 (30.6%) | 22.51 ± 0.24 | |||
AA | 48 (5.6%) | 22.48 ± 0.48 | |||
SBP, mmHg | GG | 552 (63.8%) | 138.20 ± 0.88 | −0.84(−3.67 to 1.99) | 0.56 |
GA | 265 (30.6%) | 137.20 ± 1.23 | |||
AA | 48 (5.6%) | 137.02 ± 2.93 | |||
DBP, mmHg | GG | 552 (63.8%) | 80.99 ± 0.49 | −1.29(−2.80 to 0.23) | 0.097 |
GA | 265 (30.6%) | 80.10 ± 0.59 | |||
AA | 48 (5.6%) | 77.48 ± 1.59 | |||
TG, mmol/L b | GG | 552 (63.8%) | 2.53 ± 0.37 | −0.22(−1.20 to 0.76) | 0.66 |
GA | 265 (30.6%) | 2.27 ± 0.11 | |||
AA | 48 (5.6%) | 2.47 ± 0.36 | |||
TC, mmol/L b | GG | 552 (63.8%) | 5.35 ± 0.05 | 0.14(−0.05 to 0.32) | 0.14 |
GA | 265 (30.6%) | 5.52 ± 0.09 | |||
AA | 48 (5.6%) | 5.31 ± 0.23 | |||
LDL-c, mmol/L b | GG | 552 (63.8%) | 3.12 ± 0.03 | 0.02(−0.09 to 0.13) | 0.75 |
GA | 265 (30.6%) | 3.12 ± 0.05 | |||
AA | 48 (5.6%) | 3.23 ± 0.13 | |||
HDL-c, mmol/L b | GG | 552 (63.8%) | 1.33 ± 0.02 | 0.04(−0.02 to 0.10) | 0.23 |
GA | 265 (30.6%) | 1.38 ± 0.03 | |||
AA | 48 (5.6%) | 1.31 ± 0.04 | |||
Glucose, mmol/L | GG | 552 (63.8%) | 5.75 ± 0.06 | 0.12(−0.08 to 0.33) | 0.24 |
GA | 265 (30.6%) | 5.80 ± 0.09 | |||
AA | 48 (5.6%) | 6.26 ± 0.26 |
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Wang, Y.-L.; Liang, H.-Y.; Gao, Y.-H.; Wu, X.-J.; Chen, X.; Pan, B.-Y.; Yang, X.-X.; Liu, H.-Z. A Functional Variant of NEDD4L Is Associated with Obesity and Related Phenotypes in a Han Population of Southern China. Int. J. Mol. Sci. 2013, 14, 7433-7444. https://doi.org/10.3390/ijms14047433
Wang Y-L, Liang H-Y, Gao Y-H, Wu X-J, Chen X, Pan B-Y, Yang X-X, Liu H-Z. A Functional Variant of NEDD4L Is Associated with Obesity and Related Phenotypes in a Han Population of Southern China. International Journal of Molecular Sciences. 2013; 14(4):7433-7444. https://doi.org/10.3390/ijms14047433
Chicago/Turabian StyleWang, Yu-Lin, Hui-Ying Liang, Yun-He Gao, Xue-Ji Wu, Xi Chen, Bing-Ying Pan, Xue-Xi Yang, and Hua-Zhang Liu. 2013. "A Functional Variant of NEDD4L Is Associated with Obesity and Related Phenotypes in a Han Population of Southern China" International Journal of Molecular Sciences 14, no. 4: 7433-7444. https://doi.org/10.3390/ijms14047433
APA StyleWang, Y. -L., Liang, H. -Y., Gao, Y. -H., Wu, X. -J., Chen, X., Pan, B. -Y., Yang, X. -X., & Liu, H. -Z. (2013). A Functional Variant of NEDD4L Is Associated with Obesity and Related Phenotypes in a Han Population of Southern China. International Journal of Molecular Sciences, 14(4), 7433-7444. https://doi.org/10.3390/ijms14047433