ARID1A Mutations and PI3K/AKT Pathway Alterations in Endometriosis and Endometriosis-Associated Ovarian Carcinomas
Abstract
:1. Introduction
2. ARID1A Mutations
2.1. Background
2.2. ARID1A Mutations in Endometriosis-Associated Ovarian Carcinomas
2.3. Loss of ARID1A Expression in Endometriosis
2.4. Correlation between ARID1A Mutations and Loss of ARID1A Expression in Immunohistochemistry
3. PI3K/AKT-Pathway Alterations
3.1. Introduction
3.2. PI3K/AKT Pathway Activation in Endometriosis
3.3. PI3K/AKT Pathway Alterations in OCCC and EnOC
3.4. PIK3CA Mutations in Endometriosis-Associated Ovarian Cancer and Endometriosis
3.5. Targeting the PI3K/AKT-Pathway in OCCC and EnOC
4. Further Implications
4.1. Functional Studies about the Loss of ARID1A Expression In Vitro and In Vivo
4.2. Evidence for Cooperative Mechanisms between ARID1A and the PI3K/AKT Pathway
4.3. Possible Clinical Implications of ARID1A Mutations
5. Conclusions
Acknowledgments
Conflicts of Interest
References
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Authors, year of publication | Ovarian carcinoma subtypes | Loss of ARID1A protein expression | ARID1A mutations by sequencing methods | Ref. |
---|---|---|---|---|
Jones et al., 2010 | 42 OCCC | - | 57% somatic ARID1A mutations in a total of 42 OCCC | [2] |
Wiegand et al., 2010 | 18 OCCC tumor samples and 1 OCCC cell line (whole transcriptome)—discovery cohort | Loss of ARID1A protein expression correlated strongly with the presence of ARID1A mutations in the mutation discovery and validation cohort. | Somatic ARID1A mutations (3 nonsense, 2 insertion/deletion, 1 missense and 1 gene rearrangement) in the discovery cohort | [1] |
210 ovarian carcinomas and a second OCCC cell line (ARID1A sequencing); mutation validation cohort | ARID1A mutations in 55 of 119 OCCC (46%), 10 of 33 EnOC (30%) and none of the 76 high-grade serous ovarian carcinomas | |||
455 ovarian carcinomas (IHC validation cohort) | Loss of ARID1A protein expression in 55 (42%) of 132 OCCC, 39 (31%) of 125 EnOC, and 12 (6%) of 198 high-grade serous ovarian carcinomas. | |||
Maeda et al., 2010 | OCCC | Negative ARID1A expression in 88 of 149 (59%) OCCC tumor samples by IHC | Sequencing of 12 OCCC tumor samples; 9 samples with ARID1A mutations and 3 with wild-type expression | [99] |
Guan et al., 2011 | serous and mucinous OC | No loss of ARID1A expression in 221 high-grade serous, 15 low-grade serous, and 36 mucinous ovarian carcinomas | No ARID1A mutations detected in 32 high-grade serous, 19 low-grade serous and 5 mucinous ovarian carcinomas | [88] |
Katagiri et al., 2011 | OCCC | Loss of ARID1A expression in 9 (15%) of 60 OCCC | - | [100] |
Yamamoto et al., 2012 | OCCC | Loss of ARID1A expression in 23 (55%) of 42 OCCC | - | [101] |
Yamamoto et al., 2012 | 90 cases of primary OCCC (including 42 previously examined) | Loss of ARID1A expression in 44% of 90 OCCC samples | - | [102] |
Lowery et al., 2012 | 212 OCCC and EnOC | Loss of ARID1A expression in 34 (41%) of 82 OCCC and 62 (48%) of 130 EnOC | - | [103] |
Samartzis et al., 2012 | 136 ovarian cancer samples as study control (23 OCCC, 28 EnOC, 63 serous ovarian carcinomas, 15 mucinous ovarian carcinomas) | Loss of ARID1A expression in 5 (22%) of 23 OCCC, 13 (46%) of 28 EnOC, 7 (11%) of 63 serous ovarian carcinomas, 4 (27%) of 15 mucinous ovarian carcinomas | - | [104] |
Authors, year of publication | Endometriosis samples | Loss of ARID1A protein expression | ARID1A mutations by sequencing | Ref. |
---|---|---|---|---|
Wiegand et al., 2010 | Two cases with atypical endometriosis adjacent to ARID1A-deficient OCCC (adjacent and distant endometriosis was investigated from both cases) | In two patients, loss of ARID1A expression were evident in the tumor and contiguous atypical endometriosis, but not in distant endometriotic lesions | ARID1A mutations in the tumor and contiguous atypical endometriosis, but not in distant endometriosis | [1] |
Wiegand et al., 2011 | 10 cases of atypical endometriosis | Loss of ARID1A expression in 1 of 10 samples in the atypical areas, with retention in non-atypical endometriosis | - | [87] |
Yamamoto et al., 2012 | 59 endometriotic lesions present in 90 cases of OCCC (28 cases adjacent to tumor samples) | Complete loss of ARID1A expression in 28 endometriotic samples, of those, 17 adjacent to tumor tissue | - | [102] |
Yamamoto et al., 2012 | 22 solitary benign endometriosis samples and 28 endometriosis samples (14 non-atypical and 14 atypical) issuing from 17 patients with ARID1A-deficient endometriosis-associated ovarian carcinomas | All the 22 non-tumor associated endometriosis samples were ARID1A positive; 12 (86%) of the 14 tumor associated non-atypical endometrioses were ARID1A-deficient, and all of the 14 atypical endometrioses were ARID1A-deficient | - | [101] |
Samartzis et al., 2012 | 74 samples of non-atypical endometriosis: ovarian (n = 27), peritoneal (n = 19); deep-infiltrating (n = 28); 30 samples of normal endometrium as control | Complete lack of ARID1A expression was observed in three endometriomas (n = 3/20, 15%) and one deep-infiltrating endometriosis sample (n = 1/22, 5%); in addition, clonal expression loss was observable in cases of partially negative ARID1A expression | - | [104] |
Ayhan et al., 2012 | 15 discrete endometriotic foci remote from endometriotic cyst and ovarian carcinoma; 4 ovarian endometriomas without carcinoma and 6 cases of peritoneal endometriosis as controls | All cases retained ARID1A expression | - | [105] |
Xiao et al., 2012 | 36 cases of solitary ovarian endometriosis; normal eutopic endometrium as control | Loss of ARID1A expression in 20% of benign endometriomas; normal endometrium retained ARID1A expression | - | [106] |
Authors, year of publication | Samples | PIK3CA mutations | Ref. |
---|---|---|---|
Campbell et al., 2004 | 167 primary epithelial ovarian carcinomas, of which, 40 were samples of EnOC and OCCC and 88 were samples of serous ovarian carcinomas (all coding exons of PIK3CA analyzed) | PIK3CA mutations in 8 (20%) of 40 EnOC and OCCC compared to only 2 (2.3%) of 88 in serous ovarian carcinomas (p = 0.001); mutation or gene amplification of PIK3CA was found in a total of 45% of OCCC and EnOC | [135] |
Wang et al., 2005 | 109 advanced ovarian carcinomas, including inter alia 2 OCCC and 5 EnOC, as well as 90 serous and 4 mucinous ovarian carcinomas (PIK3CA exon 9 and 20 analyzed) | A total of 4 activating missense PIK3CA mutations in 109 tumors were found (in 1 of 2 OCCC, 1 mucinous and 2 serous ovarian carcinomas) | [136] |
Levine et al., 2005 | 198 unselected invasive epithelial ovarian carcinomas (exon 9 and 20 analyzed) | PIK3CA mutations in 24 of 198 (12%) ovarian carcinomas (not significantly different between different histological subtypes) | [137] |
Willner et al., 2007 | 12 OCCC, 26 EnOC and 51 serous ovarian carcinomas | Mutations in 3 of 12 (25%) OCCC, in 3 of 26 (12%) EnOC, but in none of 51 serous ovarian carcinomas PIK3CA gene amplification found in 0/22 EnOC and OCCC compared to 19/94 (20%) in SC | [138] |
Kuo et al., 2009 | 97 OCCC (18 OCCC with affinity-purified tumor cells from fresh specimen, 69 microdissected tumors from paraffin tissues, 10 tumor cell lines) | PIK3CA mutations in 33% of the 97 OCCC (46% of the 28 affinity-purified OCCC and OCCC cell lines) | [129] |
Jones et al., 2010 | Whole exome sequencing in 8 OCCC samples and validation in 42 OCCC (including the 8 tumor samples of the discovery cohort) by Sanger sequencing of all exon | Mutations of PIK3CA in 40% of the 42 tumors (a total of 17 mutations), the majority at codons 542, 545, 546 or 1,047 | [2] |
Yamamoto et al., 2011 | 23 OCCC (sequencing of PIK3CA exons 9 and 20) | PIK3CA mutations in 10 (43%) of 23 OCCC (H1047R mutations in the kinase domain in all cases) | [134] |
Yamamoto et al., 2012 | 42 OCCC (28 endometriosis-associated cases and 14 clear-cell adenofibroma-associated carcinoma cases (sequencing of exons 9 and 20) | 17 (40%) of the 42 OCCC harboring PIK3CA mutations (majority of them ARID1A-deficient carcinomas (71%), suggesting frequent co-occurrence of mutations in these two genes | [101] |
Yamamoto et al., 2012 | 90 cases of OCCC (including 42 cases previously examined in [101]; sequencing of PIK3CA exons 9 and 20) | PIK3CA mutations found in 34 (39%) of 88 informative OCCC cases | [102] |
Rahman et al., 2012 | Mutational analysis of PIK3CA (exons 1, 9, 20) and immunohistochemistry for phospho-AKT and -mTOR in 56 OCCC samples 13 ovarian carcinoma cell lines (4 serous, 9 clear cell) for in vitro inhibitor studies | Missense mutations in 16 (28.6%) of 56 OCCC tumor samples No correlation of PIK3CA mutations with the immunohistochemical pattern of phosphorylated AKT or mTOR No correlation of PIK3CA mutations with sensitivity to PI3K/AKT/mTOR inhibitors in OCCC cell lines | [139] |
McConechy et al., 2013 | Select exon capture sequencing in 33 EnOC samples in addition to 307 endometrial endometrioid carcinomas | 12 (40%) of 30 EnOC mutated in PIK3CA. 107 (39%) of 307 low-grade endometrial endometrioid carcinomas mutated in PIK3CA | [140] |
Authors, year of publication | Samples | PIK3CA mutations | Ref. |
---|---|---|---|
Laudanski et al., 2009 | Gene expression study using micro fluidic gene array in eutopic endometrium of 40 women with endometriosis and 41 controls without endometriosis | PIK3CA expression in ovarian endometriosis significantly increased compared to endometrium of same patient. PIK3CA in endometrium of patients with endometriosis expressed at same level as in control endometrium. No mutations examined | [116] |
Yamamoto et al., 2011 | Tumor-adjacent endometriotic epithelium in 10 (of totally 23 OCCC) that harbored mutations in PIK3CA (sequencing of PIK3CA exons 9 and 20) | Same H1047R mutation found in endometriotic epithelium adjacent to OCCC in 9 (90%) of 10 cases In 6 of the 9 lesions, the same mutation was found even in nonatypical endometriotic epithelium, indicating that PIK3CA are occurring very early in the tumorigenesis of OCCC | [134] |
Vestergaard et al., 2011 | 23 ectopic endometriotic samples (PIK3CA exon 9 and 20) | No PIK3CA mutations detected in this collective | [141] |
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Samartzis, E.P.; Noske, A.; Dedes, K.J.; Fink, D.; Imesch, P. ARID1A Mutations and PI3K/AKT Pathway Alterations in Endometriosis and Endometriosis-Associated Ovarian Carcinomas. Int. J. Mol. Sci. 2013, 14, 18824-18849. https://doi.org/10.3390/ijms140918824
Samartzis EP, Noske A, Dedes KJ, Fink D, Imesch P. ARID1A Mutations and PI3K/AKT Pathway Alterations in Endometriosis and Endometriosis-Associated Ovarian Carcinomas. International Journal of Molecular Sciences. 2013; 14(9):18824-18849. https://doi.org/10.3390/ijms140918824
Chicago/Turabian StyleSamartzis, Eleftherios P., Aurelia Noske, Konstantin J. Dedes, Daniel Fink, and Patrick Imesch. 2013. "ARID1A Mutations and PI3K/AKT Pathway Alterations in Endometriosis and Endometriosis-Associated Ovarian Carcinomas" International Journal of Molecular Sciences 14, no. 9: 18824-18849. https://doi.org/10.3390/ijms140918824
APA StyleSamartzis, E. P., Noske, A., Dedes, K. J., Fink, D., & Imesch, P. (2013). ARID1A Mutations and PI3K/AKT Pathway Alterations in Endometriosis and Endometriosis-Associated Ovarian Carcinomas. International Journal of Molecular Sciences, 14(9), 18824-18849. https://doi.org/10.3390/ijms140918824