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Article

DFT Study of Molecular and Electronic Structure of Ca(II) and Zn(II) Complexes with Porphyrazine and tetrakis(1,2,5-thiadiazole)porphyrazine

Ivanovo State University of Chemistry and Technology, Research Institute of Chemistry of Macroheterocyclic Compounds, 153000 Ivanovo, Russia
*
Author to whom correspondence should be addressed.
Int. J. Mol. Sci. 2020, 21(8), 2923; https://doi.org/10.3390/ijms21082923
Submission received: 20 March 2020 / Revised: 17 April 2020 / Accepted: 19 April 2020 / Published: 22 April 2020

Abstract

:
Electronic and geometric structures of Ca(II) and Zn(II) complexes with porphyrazine (Pz) and tetrakis(1,2,5-thiadiazole)porphyrazine (TTDPz) were investigated by density functional theory (DFT) calculations and compared. The perimeter of the coordination cavity was found to be practically independent on the nature of a metal and a ligand. According to the results of the natural bond orbital (NBO) analysis and quantum theory of atoms in molecules (QTAIM) calculations, Ca–N bonds possess larger ionic contributions as compared to Zn–N. The model electronic absorption spectra obtained with the use of time-dependent density functional theory (TDDFT) calculations indicate a strong bathochromic shift (~70 nm) of the Q-band with a change of Pz ligand by TTDPz for both Ca and Zn complexes. Additionally, CaTTDPz was synthesized and its electronic absorption spectrum was recorded in pyridine and acetone.

1. Introduction

Porphyrins, phthalocyanines and their analogues have found a number of applications, particularly, due to their intense absorption in the visible region [1,2,3,4]. Since the optical properties are governed by the electronic structure of the macrocycle, thorough theoretical studies by quantum-chemical methods are usually performed to explain the observed features of the absorption spectra [5,6,7,8,9,10,11,12,13] and open the possibilities of their in-silico design in the case of compounds, for which the experimental data are absent. Such investigations in the case of the complexes with transition metals are often non-trivial due to the necessity to account for the multireference character of the wavefunction. However, in the case of the closed-shell species, density functional theory (DFT) can be directly applied to obtain the qualitative and quantitative information about the ground-state properties. Therefore, a reasonable first step in the comparative studies of the influences of a transition metal and a ligand on the chemical bonding and spectral properties is to consider the relatively simple borderline d0 and d10 configurations (Ca and Zn, respectively) in order to eliminate the multireference effects.
While porphyrins and phthalocyanines have been widely investigated, the information on their porphyrazine (Pz) analogues is still incomplete. Moreover, in recent years, much attention has been paid to 1,2,5-thiadiazole-fused porphyrazines possessing especially strongly electron-deficient macrocycle, and capable of forming layers with strong intermolecular interactions. As a result, tetrakis(1,2,5-thiadiazole)porphyrazine (TTDPz) and its metal complexes are actively studied for application in organic electronics, such as n-type semiconductors [14,15,16,17,18]. Therefore, their theoretical study is quite important to reveal the influence of 1,2,5-thiadiazole rings on the peculiarities of the electronic properties of the porphyrazine macrocycle in the metal complexes (Figure 1) with different contributions of σ- and π-bonding effects in the formation of M-Np bonds [2,3,7,17,19,20].
Earlier in our laboratory, the magnesium (II) complexes with tetrakis(1,2,5-chalcogenadiazole) MgTXDPz (X = O, S, Se, Te) were investigated by DFT calculations in order to examine the influence of a chalcogen atom on their geometry and electronic structure [21]. The theoretical studies of the molecular structures and electronic spectra of the porphyrazine complexes with the alkaline-earth metals Be and Mg are described in [13], and for the porphyrazine complexes with alkali metals in [22]. The present contribution aims to determine the nature of the chemical bonding and influence of the metal atom (Ca [d0] and Zn [d10]) and the ligand (Pz and TTDPz) on the electronic absorption spectrum. It should be mentioned that the electronic spectrum of ZnPz complex has already been thoroughly interpreted in [7,11]. We recalculated it using a different theoretical approximation only for comparison purposes. Besides, in order to complement the comparison, a CaTTDPz complex was synthesized for the first time and its electronic spectrum was measured.

2. Results and Discussion

2.1. Chemical Bonding in MPz and MTTDPz

The closed-shell MPz and MTTDPz complexes with Ca and Zn can be treated using single-reference methods. Therefore, DFT was chosen for all calculations. The equilibrium structures of the complexes ZnPz and ZnTTDPz were determined to possess the planar structures of D4h symmetry, while the complexes with Ca(II) exhibit significant doming distortion, and their structures belong to the C4v point group. The force-field calculations yielded no imaginary frequencies, indicating that the optimized configurations correspond to the minima on the potential energy hypersurfaces. The calculated molecular parameters are presented in Table 1.
The results of the natural bond orbital (NBO) analysis of the electron density distribution demonstrate the different nature of chemical bonding in the MPz and MTTDPz complexes. First, we find a decrease of the ionic component of M–N bond in the case of the d10 shell of Zn(II), as compared to the Ca(II) complex with an unoccupied d0 shell. This can be rationalized not only in terms of the Wiberg bond index Q(M-N), which increases from Ca–N to Zn–N, but also by the comparison of the energies of donor–acceptor interactions (∑ E(d-a)) between lone pairs on the nitrogen atoms and 4s-, 3d- and 4p- orbitals of the metal atoms. Another confirmation stems from the values of the delocalization indices calculated in the framework of the quantum theory of atoms in molecules (QTAIM) analysis being close to the values of Q(M-N).
The complexes of the Pz and TTDPz ligands with Zn(II) are stabilized by strong interactions of these types: LP(N) → 4s(Zn) and LP(N) → 4p(Zn) (Figure 2). In the case of the Ca(II) complexes, only much weaker interactions LP(N) → 4s(Ca), LP(N) → 3dx2−y2(Ca) and LP(N) → 3dyz(Ca) were found within the NBO scheme (Figure 3).
Interestingly, while the Zn(II) complexes are stable even in concentrated H2SO4 in ambient conditions [23], the Ca(II) complex with TTDPz macrocycle, first prepared in the present work, undergoes easy demetalation upon treatment with hot acetic acid, and forms ZnTTDPz upon heating with the Zn(II) acetate in pyridine. This experimental observation is confirmed theoretically (within the rigid rotor–harmonic oscillator (RRHO) approximation from the B3LYP/pcseg-2 geometries and the harmonic frequencies) by the large negative value of the Gibbs free energy (∆rG⁰(298.15) = −678 kJ mol−1) of the reaction: CaTTDPz + Zn2+ → Ca2+ + ZnTTDPz. The analogous value for the reaction CaPz + Zn2+ → Ca2+ + ZnPz is ∆rG⁰(298.15) = −695 kJ mol−1.
In the framework of the QTAIM theory, the existence of a chemical bond indicates the presence of a bond critical point (BCP) between the corresponding atoms. The nature of the chemical bond can be determined by the value of the electron density, laplacian ∇2ρ. A positive value of the electron density laplacian ∇2ρ indicates ionic interaction. However, the values of M-Np bond orders, as well as the corresponding delocalization indices δ(M|Np) representing the magnitudes of the electron exchange between the basins of the corresponding atoms, allow to argue that these bonds, along with an ionic component (Table 2), possess a noticeable covalent component.
The annelated thiadiazole ring in the TTDPz complex also influences the geometry of the coordination cavity. The electron density is shifted towards electron-withdrawing nitrogen atoms in the thiadiazole moieties. It in turn leads through the inductive effect to a charge transfer in the row Nt ← Cβ ← Cα. The weakening of the N– Cα bonds results in an increase of the Cα–N–Cα angle and the elongation of M–N distance in the MTTDPz complexes as compared to their MPz analogues.
As it was previously found for the complexes of La and Lu with hemihexaphyrazine [24], the perimeters of the internal 16-membered macrocycle of all the studied structures (Figure 4) do practically not depend on the nature of a metal atom, and are equal to 21.55(2) Å.

2.2. Molecular Orbitals

The symmetry of the frontier molecular orbitals is similar in the ZnPz and ZnTTDPz complexes, and is also typical for porphyrzines: the highest occupied molecular orbital (HOMO) is an a1u orbital and the lowest unoccupied molecular orbitals (LUMOs) are doubly-degenerated eg* orbitals (Figure 5). The LUMOs are localized on the porphyrazine macrocycle. The situation is similar for the calcium complexes but different in the symmetry of orbitals (for example, the HOMO is an a2 orbital and the LUMOs are doubly-degenerated e*) due to another symmetry point group.
The nodes of the HOMO are located on the carbon atoms in the case of Pz complexes and additionally on the Nt atoms for TTDPz macrocycles. The separation of the HOMO from the other π-MOs is less pronounced in the case of Pz complexes as compared to their thiadiazole-annelated analogues.
The HOMO-1 MO in CaPz, the HOMO-2 in CaTTDPz and ZnPz, and the HOMO-4 in ZnTTDPz are Gouterman type orbitals [25,26] predominantly localized on the nitrogen atoms of the macrocycles, except for ZnTTDPz. They can be connected with a significant decrease of the energy of this orbital in the case of ZnTTPz as compared to the other molecules (Figure 6).

2.3. Electonic Absorption Spectra

The comparison of the calculated spectra demonstrates a strong influence of the ligand. For both Ca and Zn complexes, a strong bathochromic shift (~70 nm) of the Q-band occurs with a change of Pz ligand by TTDPz (Figure 7). The calculated oscillator strengths (f) for the lowest-allowed excited states along with their composition (in terms of one-electron transitions) are given in Table 3.
The long-wave absorption maxima (Q band) in the spectra of MPz and MTTDPz can be assigned to the almost pure Goutermantype [25,26] transition   a 2 e g for Ca complexes and a 1 u e g for Zn complexes. The electronic transitions to the higher excited states (the Soret near-UV region of 300–420 nm) possess larger oscillator strengths and are predominantly composed of transitions from the filled a 1 (Ca complexes) a 2 u (Zn complexes) type MOs to the LUMOs.

3. Computational Methods

The DFT-based investigation of MPz and MTTDPz included geometry optimizations and computations of the harmonic vibrations followed by TDDFT calculations of the electronic absorption spectrum. The number of the calculated excited states was 30. The calculations were performed using B3LYP functional and pcseg-2 basis set [28] taken from the EMSL BSE library [29,30]. The Firefly QC [31] package, which is partially-based on the GAMESS(US) [32] source code was used in all the calculations. Optimized Cartesian coordinates of MPz and MTTDPz are available from Supplementary materials.
The QTAIM (quantum theory of atoms in molecules) analysis [33] was performed using the AIMAll [34] software package. Topological parameters of ρ(r) in bond critical points and charges on atoms are collected in Supplementary materials.
The molecular models and orbitals demonstrated in the paper were visualized by means of the Chemcraft program [35].

4. Experimental

Synthesis of CaTTDPz

Calcium metal (0.35 g, 8.5 mmol) was refluxed in 50 mL of butanol in a round-bottom flask for 12 h affording the suspension of Ca(II) butoxide. Further 3,4-dicyano-1,2,5-thiadiazole (1.15 g, 8.5 mmol) was added and the reaction mass was refluxed with vigorous stirring for 8 h. At the end of the synthesis, the reaction mixture was poured into a Petri dish and left until the butanol was completely evaporated. Further, the solid mass was washed with CH2Cl2 to remove the unreacted dinitrile and low molecular weight reaction intermediates. After drying, the resulting product was poured into a 25% aqueous solution of acetic acid, and at room temperature with continuous stirring it was held for 1 h to dissolve the calcium butoxide. The solid precipitate was filtered and washed repeatedly with water and then with acetone and dried to constant weight. The mass of the obtained product is 0.7 g (yield 45%). Electronic absorption spectra of CaTTDPz in pyridine and acetone are given in Supplementary materials.

5. Conclusions

The influence of the nature of the metal (either Ca or Zn) and the ligand (either porphyrazine or thiadiazole-annelated porphyrazine) on the geometry and electronic structure of the macroheterocyclic complex was studied with the use of DFT calculations at the B3LYP/pcseg-2 level. The nature of the chemical bonding is quite different in the case of Zn complexes as compared to the Ca analogues. Overall, all the complexes have a substantial ionic contribution to the M-Np bonding, but a much larger covalent contribution appears in ZnPz and ZnTTDPz due to the donor-acceptor interactions of the type LP(N) → 4s(Zn) and LP(N) → 4p(Zn). The perimeter of the coordination cavity was found to be practically independent on the nature of a metal and a ligand.
The change of Pz ligand by TTDPz causes a strong bathochromic shift (~70 nm) of the Q-band for both Ca and Zn complexes. As it usually occurs to porphyrazine metal complexes, the Q-band can be assigned to the almost pure Gouterman type transition.
While the complexes of porphyrazine with Mg(II) are easily accessible and well-studied, the Ca(II) complexes are not known. In this work, we prepared the CaTTDPz complex for the first time and demonstrated that it possesses high lability. This is explained theoretically by the more ionic nature of the Np-Ca bonds as compared to the Np-Zn bonds. Unlike the Ca(II) complex, the Zn(II) complex cannot be prepared directly by the template cyclotetramerization of the dinitrile, but instead can be obtained readily from the Ca(II) complex.

Supplementary Materials

Supplementary materials can be found at https://www.mdpi.com/1422-0067/21/8/2923/s1.

Author Contributions

Conceptualization, P.A.S.; Methodology, Y.A.Z.; Investigation, I.A.K. and M.S.M.; Resources, Y.A.Z.; Data Curation, I.V.R.; Writing—Original Draft Preparation, A.A.O. All authors have read and agreed to the published version of the manuscript.

Funding

This work is supported by the Russian Science Foundation (grant No. 19-73-00256).

Conflicts of Interest

The authors declare no conflict of interest.

Abbreviations

PzPorphyrazine
TTDPzTetrakis(1,2,5-thiadiazole) porphyrazine
DFTDensity Functional Theory
TDDFTTime Dependent Density Functional Theory
NBONatural bond orbital
QTAIMQuantum theory of atoms in molecules

References

  1. Wöhrle, D.; Schnurpfeil, G.; Makarov, S.G.; Kazarin, A.; Suvorova, O.N. Practical Applications of Phthalocyanines—From Dyes and Pigments to Materials for Optical, Electronic and Photo-electronic Devices. Macroheterocycles 2012, 5, 191–202. [Google Scholar] [CrossRef]
  2. Donzello, M.P.; Ercolani, C.; Stuzhin, P.A. Novel families of phthalocyanine-like macrocycles-Porphyrazines with annulated strongly electron-withdrawing 1,2,5-thia/selenodiazole rings. Coord. Chem. Rev. 2006, 250, 1530–1561. [Google Scholar] [CrossRef]
  3. Donzello, M.P.; Ercolani, C.; Novakova, V.; Zimcik, P.; Stuzhin, P.A. Tetrapyrazinoporphyrazines and their metal derivatives. Part I: Synthesis and basic structural information. Coord. Chem. Rev. 2016, 309, 107–179. [Google Scholar] [CrossRef]
  4. Novakova, V.; Donzello, M.P.; Ercolani, C.; Zimcik, P.; Stuzhin, P.A. Tetrapyrazinoporphyrazines and their metal derivatives. Part II: Electronic structure, electrochemical, spectral, photophysical and other application related properties. Coord. Chem. Rev. 2018, 361, 1–73. [Google Scholar] [CrossRef]
  5. Zhang, X.; Liu, Z.; Sheng, N.; Jiang, J. Molecular structure, electronic structure and vibrational spectra of metal-free, N,N′-dideuterio, and magnesium tetrakis(thiadiazole)porphyrazines: Density functional calculations. J. Mol. Struct. THEOCHEM 2005, 755, 179–186. [Google Scholar] [CrossRef]
  6. Cai, X.; Zhang, Y.; Zhang, X.; Jiang, J. Structures and properties of metal-free and copper tetrakis(thiadiazole) porphyrazine and metal-free tetrakis(selenodiazole) porphyrazine based on density functional theory calculations. J. Mol. Struct. THEOCHEM 2007, 812, 63–70. [Google Scholar] [CrossRef]
  7. Donzello, M.P.; Ercolani, C.; Kadish, K.M.; Ricciardi, G.; Rosa, A.; Stuzhin, P.A. Tetrakis(thiadiazole)porphyrazines. 5. Electrochemical and DFT/TDDFT studies of the free-base macrocycle and its MgII ZnII, and CuII complexes. Inorg. Chem. 2007, 46, 4145–4157. [Google Scholar] [CrossRef]
  8. Tverdova, N.V.; Giricheva, N.I.; Savelyev, D.S.; Mikhailov, M.S.; Vogt, N.; Koifman, O.I.; Stuzhin, P.A.; Girichev, G.V. Molecular structure of tetrakis(1,2,5-thiadiazolo)- porphyrazinatozinc(II) in gaseous phase. Macroheterocycles 2017, 10, 27–30. [Google Scholar] [CrossRef] [Green Version]
  9. Nguyen, K.A.; Pachter, R. Ground state electronic structures and spectra of zinc complexes of porphyrin, tetraazaporphyrin, tetrabenzoporphyrin, and phthalocyanine: A density functional theory study. J. Chem. Phys. 2001, 114, 10757–10767. [Google Scholar] [CrossRef]
  10. Liao, M.S.; Scheiner, S. Comparative study of metal-porphyrins, -porphyrazines, and -phthalocyanines. J. Comput. Chem. 2002, 23, 1391–1403. [Google Scholar] [CrossRef]
  11. Baerends, E.J.; Ricciardi, G.; Rosa, A.; Van Gisbergen, S.J.A. A DFT/TDDFT interpretation of the ground and excited states of porphyrin and porphyrazine complexes. Coord. Chem. Rev. 2002, 230, 5–27. [Google Scholar] [CrossRef]
  12. Rosa, A.; Ricciardi, G.; Baerends, E.J.; Van Gisbergen, S.J.A. The optical spectra of NiP, NiPz, NiTBP, and NiPc: Electronic effects of meso-tetraaza substitution and tetrabenzo annulation. J. Phys. Chem. A 2001, 105, 3311–3327. [Google Scholar] [CrossRef]
  13. Sliznev, V.V. Theoretical study of structures of alkaline-earth metal (M=Be, Mg) complexes of porphyrin (MP), porphyrazine (MPz) and phthalocyanine (MPc). Macroheterocycles 2013, 6, 111–122. [Google Scholar] [CrossRef] [Green Version]
  14. Miyoshi, Y.; Kubo, M.; Fujinawa, T.; Suzuki, Y.; Yoshikawa, H.; Awaga, K. Electrochromism and stable n-type doping of highly oriented thin films of tetrakis(thiadiazole)porphyrazine. Angew. Chem.-Int. Ed. 2007, 46, 5532–5536. [Google Scholar] [CrossRef] [PubMed]
  15. Fujimoto, T.; Miyoshi, Y.; Matsushita, M.M.; Awaga, K. A complementary organic inverter of porphyrazine thin films: Low-voltage operation using ionic liquid gate dielectrics. Chem. Commun. 2011, 47, 5837–5839. [Google Scholar] [CrossRef] [PubMed]
  16. Miyoshi, Y.; Fujimoto, T.; Yoshikawa, H.; Matsushita, M.M.; Awaga, K.; Yamada, T.; Ito, H. Photoconductivity and FET performance of an n-type porphyrazine semiconductor, tetrakis(thiadiazole)porphyrazine. Org. Electron. 2011, 12, 239–243. [Google Scholar] [CrossRef]
  17. Miyoshi, Y.; Takahashi, K.; Fujimoto, T.; Yoshikawa, H.; Matsushita, M.M.; Ouchi, Y.; Kepenekian, M.; Robert, V.; Donzello, M.P.; Ercolani, C.; et al. Crystal structure, spin polarization, solid-state electrochemistry, and high n-type carrier mobility of a paramagnetic semiconductor: Vanadyl tetrakis(thiadiazole)porphyrazine. Inorg. Chem. 2012, 51, 456–462. [Google Scholar] [CrossRef]
  18. Stuzhin, P.; Mikhailov, M.; Travkin, V.; Gudkov, E.; Pakhomov, G. Multilayer Photovoltaic Structures Based on Tetrathiadiazoloporphyrazine/Subphthalocyanine Heterojunction. Macroheterocycles 2012, 5, 162–165. [Google Scholar] [CrossRef] [Green Version]
  19. Donzello, M.P.; Agostinetto, R.; Ivanova, S.S.; Fujimori, M.; Suzuki, Y.; Yoshikawa, H.; Shen, J.; Awaga, K.; Ercolani, C.; Kadish, K.M.; et al. Tetrakis(thiadiazole)porphyrazines. 4. Direct template synthesis, structure, general physicochemical behavior, and redox properties of Al III, GaIII, and InIII complexes. Inorg. Chem. 2005, 44, 8539–8551. [Google Scholar] [CrossRef]
  20. Pia Donzello, M.; Viola, E.; Giustini, M.; Ercolani, C.; Monacelli, F. Tetrakis(thiadiazole)porphyrazines. 8. Singlet oxygen production, fluorescence response and liposomal incorporation of tetrakis(thiadiazole) porphyrazine macrocycles [TTDPzM] (M = Mg II(H 2O), Zn II, Al IIICl, Ga IIICl, Cd II, Cu II, 2H I). Dalton Trans. 2012, 41, 6112–6121. [Google Scholar] [CrossRef]
  21. Zhabanov, Y.A.; Tverdova, N.V.; Giricheva, N.I.; Girichev, G.V.; Stuzhin, P.A. DFT Study of molecular and electronic structure of magnesium (II) tetra(1,2,5-chalcogenadiazolo) porphyrazines, [TXDPzMg] (X = O, S, Se, Te). J. Porphyr. Phthalocyanines 2017, 21, 439–452. [Google Scholar] [CrossRef]
  22. Sliznev, V.V.; Girichev, G.V. Theoretical Study of Alkali Metal Complexes of Porphyrin (M2P), Porphyrazine (M2Pz) and Phthalocyanine (M2Pc), M=Li, Na, K. Macroheterocycles 2011, 4, 8–17. [Google Scholar] [CrossRef] [Green Version]
  23. Bauer, E.M.; Cardarilli, D.; Ercolani, C.; Stuzhin, P.A.; Russo, U. Tetrakis(thiadiazole)porphyrazines. 2. Metal complexes with Mn(II), Fe(II), Co(II), Ni(II), and Zn(II). Inorg. Chem. 1999, 38, 6114–6120. [Google Scholar] [CrossRef]
  24. Zhabanov, Y.A.; Giricheva, N.I.; Zakharov, A.V.; Islyaikin, M.K. Distinctive features of the structure of hemihexaphyrazine complexes with Y, La, and Lu according to quantum chemical data. J. Mol. Struct. 2017, 1132, 28–33. [Google Scholar] [CrossRef]
  25. Gouterman, M.; Wagnière, G.H.; Snyder, L.C. Spectra of porphyrins. Part II. Four orbital model. J. Mol. Spectrosc. 1963, 11, 108–127. [Google Scholar] [CrossRef]
  26. Gouterman, M. Spectra of porphyrins. J. Mol. Spectrosc. 1961, 6, 138–163. [Google Scholar] [CrossRef]
  27. Berezin, B.D.; Khelevina, O.G.; Stuzhin, P.A. Kinetics of the formation of metal complexes of unsubstituted tetraazaporphine (porphyrazine) in pyridine. Russ. J. Phys. Chem. A 1985, 59, 1295–1299. [Google Scholar]
  28. Jensen, F. Unifying general and segmented contracted basis sets. segmented polarization consistent basis sets. J. Chem. Theory Comput. 2014, 10, 1074–1085. [Google Scholar] [CrossRef]
  29. Pritchard, B.P.; Altarawy, D.; Didier, B.; Gibson, T.D.; Windus, T.L. New Basis Set Exchange: An Open, Up-to-Date Resource for the Molecular Sciences Community. J. Chem. Inf. Model. 2019, 59, 4814–4820. [Google Scholar] [CrossRef]
  30. Schuchardt, K.L.; Didier, B.T.; Elsethagen, T.; Sun, L.; Gurumoorthi, V.; Chase, J.; Li, J.; Windus, T.L. Basis set exchange: A community database for computational sciences. J. Chem. Inf. Model. 2007, 47, 1045–1052. [Google Scholar] [CrossRef] [Green Version]
  31. Granovsky, A.A. Firefly Version 8. Available online: http://classic.chem.msu.su/gran/firefly/index.html (accessed on 21 April 2020).
  32. Schmidt, M.W.; Baldridge, K.K.; Boatz, J.A.; Elbert, S.T.; Gordon, M.S.; Jensen, J.H.; Koseki, S.; Matsunaga, N.; Nguyen, K.A.; Su, S.; et al. General atomic and molecular electronic structure system. J. Comput. Chem. 1993, 14, 1347–1363. [Google Scholar] [CrossRef]
  33. Bader, R.F.W. Atoms in Molecules: A Quantum Theory, Oxford University Press; Clarendon Press: Oxford, UK, 1990; ISBN 9780198558651. [Google Scholar]
  34. Some References Related to AIMAll. Available online: http://aim.tkgristmill.com/references.html (accessed on 13 March 2020).
  35. Zhurko, G.A.; Zhurko, D.A. ChemCraft Version 1.6 (build 312); Version 1.6 (build 312) Ed. Available online: http://www.chemcraftprog.com/index.html (accessed on 21 April 2020).
Figure 1. Molecular models of M-porphyzarine (MPz) (a) and M-tetrakis(1,2,5-thiadiazole)porphyzarine (MTTDPz) (b) complexes with atom labeling (M = Ca, Zn).
Figure 1. Molecular models of M-porphyzarine (MPz) (a) and M-tetrakis(1,2,5-thiadiazole)porphyzarine (MTTDPz) (b) complexes with atom labeling (M = Ca, Zn).
Ijms 21 02923 g001
Figure 2. Schemes of the dominant donor-acceptor interactions between Zn and Pz ligand: (a) the result of the orbital interaction of the type LP(N) → 4s(Zn) (E(2) = 54.0 kcal mol−1); (b) the result of the orbital interaction of the type LP(N) → 4p(Zn) (E(2) = 61.9 kcal mol−1). Only one of the four corresponding interactions is demonstrated.
Figure 2. Schemes of the dominant donor-acceptor interactions between Zn and Pz ligand: (a) the result of the orbital interaction of the type LP(N) → 4s(Zn) (E(2) = 54.0 kcal mol−1); (b) the result of the orbital interaction of the type LP(N) → 4p(Zn) (E(2) = 61.9 kcal mol−1). Only one of the four corresponding interactions is demonstrated.
Ijms 21 02923 g002
Figure 3. Schemes of the dominant donor-acceptor interactions between Ca and Pz ligand. The results of the: (a) orbital interaction of the type LP(N) → 4s(Ca) (E(2) = 11.0 kcal mol−1); (b) orbital interaction of the type LP(N) → 3dx2−y2(Ca) (E(2) = 3.5 kcal mol−1); (c) orbital interaction of the type LP(N) → 3dyz(Ca) (E(2) = 3.9 kcal mol−1).
Figure 3. Schemes of the dominant donor-acceptor interactions between Ca and Pz ligand. The results of the: (a) orbital interaction of the type LP(N) → 4s(Ca) (E(2) = 11.0 kcal mol−1); (b) orbital interaction of the type LP(N) → 3dx2−y2(Ca) (E(2) = 3.5 kcal mol−1); (c) orbital interaction of the type LP(N) → 3dyz(Ca) (E(2) = 3.9 kcal mol−1).
Ijms 21 02923 g003aIjms 21 02923 g003b
Figure 4. Internal macrocycle perimeter.
Figure 4. Internal macrocycle perimeter.
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Figure 5. Influence of the metal (Ca/Zn) and ligand (Pz/TTDPz) on the molecular orbitals of MPz and MTTDPz complexes.
Figure 5. Influence of the metal (Ca/Zn) and ligand (Pz/TTDPz) on the molecular orbitals of MPz and MTTDPz complexes.
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Figure 6. Molecular orbital (MO) level diagram for MPz and MTTDPz complexes (M = Ca, Zn). The values of highest occupied molecular orbital-lowest unoccupied molecular orbital (HOMO-LUMO) gaps are given in eV.
Figure 6. Molecular orbital (MO) level diagram for MPz and MTTDPz complexes (M = Ca, Zn). The values of highest occupied molecular orbital-lowest unoccupied molecular orbital (HOMO-LUMO) gaps are given in eV.
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Figure 7. Calculated TDDFT electronic absorption spectra for MPz and MTTDPz complexes.
Figure 7. Calculated TDDFT electronic absorption spectra for MPz and MTTDPz complexes.
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Table 1. Molecular parameters 1 of M-porphyzarine (MPz) and M-tetrakis(1,2,5-thiadiazole)porphyzarine (TTDPz) complexes optimized at B3LYP/pcseg-2 level.
Table 1. Molecular parameters 1 of M-porphyzarine (MPz) and M-tetrakis(1,2,5-thiadiazole)porphyzarine (TTDPz) complexes optimized at B3LYP/pcseg-2 level.
CaPzCaTTDPzZnPzZnTTDPz
M-Np2.2762.2991.9792.025
M-X 21.0791.020
Np-Cα1.3641.3731.3631.375
Cα-Cβ1.4581.4621.4571.458
Cα-Nm1.3331.3221.3311.317
Cβ-Cβ1.3541.4241.4571.421
Cβ-Nt 1.316 1.316
Nt-S 1.645 1.644
(Np…Np)opp4.0084.1203.9584.049
(Np…Np)adj2.8342.9132.7992.863
∠ (Np–M–Np)123.4127.3180.0180.0
∠ (Np–Cα–Nm)127.6128.1127.2128.0
∠ (Cα–Nm–Cα)124.6126.7124.4125.8
∠ (Cα–Np–Cα)107.7111.8108.8111.7
∠ (Nt–S–Nt) 100.2 100.3
1 Bond lengths in Å and bond angles in degrees. 2 X is dummy atom located in center between Np atoms.
Table 2. Selected parameters of MPz and MTTDPz complexes from NBO and quantum theory of atoms in molecules (QTAIM) calculations.
Table 2. Selected parameters of MPz and MTTDPz complexes from NBO and quantum theory of atoms in molecules (QTAIM) calculations.
CaPzZnPzCaTTDPzZnTTDPz
E(HOMO),eV−5.73−5.99−6.07−6.19
E(LUMO),eV−3.10−3.33−3.78−3.91
E, eV2.642.662.292.29
2ρ, a.u.0.2190.3940.2070.339
δ(M|Np) 0.2700.4640.2620.446
q(M) NPA1.7541.1981.7681.234
q(Np) NPA−0.702−0.633−0.660−0.596
configuration4s0.123d0.144s0.363d9.964p0.484s0.113d0.134s0.353d9.974p0.44
∑ E(d-a), kcal/mol1811617103
Q(M-Np)0.1100.3360.1040.321
r(M-Np)2.2761.9792.2992.025
Table 3. Calculated composition of the lowest excited states and corresponding oscillator strengths for MPz and MTTDPz complexes (M = Ca and Zn).
Table 3. Calculated composition of the lowest excited states and corresponding oscillator strengths for MPz and MTTDPz complexes (M = Ca and Zn).
StateComposition (%)λ, nmfexp λ, nm
CaPz
1 1E 2 a 1 e (18)
a 2 e (80)
5130.16
4 1E 1 a 1 e (33)
2 a 1 e (53)
a 2 e (9)
3440.21
5 1E 1 a 1 e (62)
2 a 1 e (25)
a 2 e (9)
3080.59
10 1E e b 1 (99)2380.06
CaTTDPz
1 1E 3 a 1 1 e (7)
3 a 2 1 e (90)
5850.27647 (Py) [this work]
641 (acetone) [this work]
6 1E 3 a 1 1 e (74)
3 a 2 1 e (8)
3 a 2 2 e (8)
3220.98
16 1E 1 b 1 1 e (9)
5 e a 1 (14)
3 a 1 2 e (67)
2540.28
17 1E 1 b 1 1 e (7)
2 b 2 2 e (77)
2510.15
18 1E 1 a 2 1 e (6)
1 b 1 1 e (30)
5 e a 1 (34)
5 e b 2 (5)
3 a 1 2 e (23)
2500.14
ZnPz
1 1Eu 2 a 2 u e g (17)
a 1 u e g (82)
5050.17584 (Py) [27]
3 1Eu 1 a 2 u e g (50)
b 2 u e g (6)
2 a 2 u e g (37)
a 1 u e g (6)
3290.15
4 1Eu 1 a 2 u e g (44)
2 a 2 u e g (42)
a 1 u e g (11)
3070.71327
5 1Eu e g b 1 u (99)2380.06
ZnTTDPz
1 1Eu 2 a 2 u 1 e g (5)
2 a 1 u 1 e g (91)
5800.29638 (DMSO) [23]
44 (DMF) [8]
4 1Eu 1 a 2 u 1 e g (44)
2 a 2 u 1 e g (42)
b 2 u 1 e g (11)
3340.28400
5 1Eu 1 a 2 u 1 e g (39)
2 a 2 u 1 e g (42)
2 a 1 u 1 e g (7)
2 a 1 u 2 e g (6)
3120.81372
8 1Eu 1 a 1 u 1 e g (6)
b 1 u 1 e g (29)
2 e g b 2 u (8)
2 e g a 2 u (52)
2520.55320
9 1Eu 2 e g a 2 u (6)
b 2 u 2 e g (86)
2460.05
12 1Eu 1 a 1 u 1 e g (52)
1 a 2 u 2 e g (17)
2 a 2 u 2 e g (18)
b 2 u 2 e g (6)
2300.10

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Otlyotov, A.A.; Ryzhov, I.V.; Kuzmin, I.A.; Zhabanov, Y.A.; Mikhailov, M.S.; Stuzhin, P.A. DFT Study of Molecular and Electronic Structure of Ca(II) and Zn(II) Complexes with Porphyrazine and tetrakis(1,2,5-thiadiazole)porphyrazine. Int. J. Mol. Sci. 2020, 21, 2923. https://doi.org/10.3390/ijms21082923

AMA Style

Otlyotov AA, Ryzhov IV, Kuzmin IA, Zhabanov YA, Mikhailov MS, Stuzhin PA. DFT Study of Molecular and Electronic Structure of Ca(II) and Zn(II) Complexes with Porphyrazine and tetrakis(1,2,5-thiadiazole)porphyrazine. International Journal of Molecular Sciences. 2020; 21(8):2923. https://doi.org/10.3390/ijms21082923

Chicago/Turabian Style

Otlyotov, Arseniy A., Igor V. Ryzhov, Ilya A. Kuzmin, Yuriy A. Zhabanov, Maxim S. Mikhailov, and Pavel A. Stuzhin. 2020. "DFT Study of Molecular and Electronic Structure of Ca(II) and Zn(II) Complexes with Porphyrazine and tetrakis(1,2,5-thiadiazole)porphyrazine" International Journal of Molecular Sciences 21, no. 8: 2923. https://doi.org/10.3390/ijms21082923

APA Style

Otlyotov, A. A., Ryzhov, I. V., Kuzmin, I. A., Zhabanov, Y. A., Mikhailov, M. S., & Stuzhin, P. A. (2020). DFT Study of Molecular and Electronic Structure of Ca(II) and Zn(II) Complexes with Porphyrazine and tetrakis(1,2,5-thiadiazole)porphyrazine. International Journal of Molecular Sciences, 21(8), 2923. https://doi.org/10.3390/ijms21082923

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