Personalized LSTM Models for ECG Lead Transformations Led to Fewer Diagnostic Errors Than Generalized Models: Deriving 12-Lead ECG from Lead II, V2, and V6
Abstract
:1. Introduction
- More power is needed, i.e., a larger sized and higher capacity battery to:
- ○
- Acquire, condition, and store the data on the wearable device. More channels of Analog to Digital Conversion would be needed and the amount of energy needed to write additional data to onboard memory on the wearable device will also increase [22].
- ○
- Transfer the data to a smart device or data gateway device.
- More storage is needed to archive the data that is uploaded to the cloud. Cloud storage increases in cost if retained for long periods.
- More electrodes need to be placed on the skin, making the device cumbersome.
- The existing literature does not describe or extensively characterize a methodology to transform a reduced set of ECG leads into a complete set of leads, including Frank XYZ vectorcardiography using an LSTM neural network. A novel deep neural network approach and a detailed validation strategy for the appropriate choice of hyperparameters using Bayesian global optimization are presented.
- We propose a transfer learning approach to create personalized models for each patient so that the ECG transformations can account for each individual’s unique anatomy. The personalized models were the most accurate based on quantitative and qualitative assessments.
2. Related Work
Source Lead → Target Lead | Study Population/Transformation Method | Reported Performance Metrics |
---|---|---|
S12 → Frank XYZ [29] | 41 patients (closed)/Linear regression | QRS, ST and T amplitudes |
S12 → Frank XYZ [30] | 39 normal, 41 patients/Linear regression | R wave amplitudes |
S12 → Frank XYZ [26] | Development Set 147 (30% normal, 15% hypertrophy, 30% MI, 25% other), test set 90 (30% normal, 25% hypertrophy, 30% MI, 15% other) (closed)/Linear regression | |
S12 → Frank XYZ [31] | Total 346 cases (closed)/Linear regression | Pearson Correlation coefficient |
S12 → Frank XYZ [32] | PTB diagnostic ECG database excluding atrial arrhythmias or A.V. block and patients with implanted Pacemakers. (open)/Linear Regression | RMS error; Pearson Correlation coefficient |
S12 → Frank XYZ [33] | PTB diagnostic ECG database only healthy and post- MI included (open)/Linear Regression | R2 |
Lead I, II and V2 → S12 [27] | 120 patients (closed)/Neural Network and Linear Regression | RMS error; Pearson Correlation coefficient |
Three bipolar leads→ S12 [34] | 30 normal, 35 patients (closed)/Linear Regression | RMS error; Pearson Correlation coefficient |
Three bipolar leads→ S12 [35] | 20 normal, 22 patients(closed)/Regression Trees | Pearson Correlation coefficient |
Lead I, II, and V2 → S12 [36] | 39 patients were randomly chosen from PTB diagnostic ECG database (open)/Linear Regression | RMS error; Pearson Correlation coefficient |
Lead I, II, and V2 → S12 [37] | 39 patients were randomly chosen from PTB diagnostic ECG database (open)/LSTM neural network | RMS error; Pearson Correlation coefficient |
Three bipolar leads→ S12 [38] | 14 normal(closed)/Neural Network and linear regression | Pearson Correlation coefficient |
Three bipolar leads→ S12 [39] | 30 normal, 30 patients(closed)/LSTM neural network | RMS error; Pearson Correlation coefficient |
This work—Lead II, V2, and V6 → S12 lead and Frank XYZ | PTB diagnostic ECG all records except three that are corrupted with too much noise. (open) | RMS error; Pearson Correlation coefficient, R2 |
3. Materials and Methods
3.1. Data Sources and Preparation
- patient095—record number 291—No V1 lead recording
- patient285—record number 537—Completely corrupted with no visible ECG data
- patient220—record number 453—No lead III data
3.2. Preparation of Patient-Specific Training Data for Personalized Models
3.3. Transformation Performance Evaluation
3.4. Transformation Performance Evaluation
- Number of layers.
- Number of hidden units per layer.
- Learning rate.
- Minibatch Size (number of training samples per iteration)
- Learning rate schedule whether no changes or change rules for the learning rate as training progresses. The learning rate can be reduced as training progresses to allow more refined tuning of the network weights closer as the cost function reaches the global minimum.
- Adam optimizer parameters:
- —momentum coefficient.
- —RMS prop coefficient.
3.5. Hyperparameter Tuning Using Bayesian Optimization
- A Gaussian Process Model (), where is the objective function defined as the final validation RMSE for a network trained with the hyperparameters defined in , and y is the value of this RMSE. The model uses the kernel function ARD Matérn 5/2.
- An update procedure for () upon each new evaluation.
- An acquisition function that is based on () that is maximized so that the next evaluation point can be chosen. The choice of was expected improvement [46].
Setup |
|
Initialization |
|
Iteration (while total number of f(x) evaluations < 50) |
|
Stopping |
|
3.6. Personalized Network Training
3.7. Blinded Assessment for Qualitative Comparison
4. Results
4.1. Quantitative Assessments
4.2. Qualitative Assessments
5. Discussion
6. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Hyperparameter | Bounds for Optimization | Sampling Transformation |
---|---|---|
Number of Hidden Units | [10, 50] | Linear, Uniform |
Minibatch Size | [16, 32] | Linear, Uniform |
Learning Rate Schedule | ‘none’ or ‘piecewise’ (reduced by a factor of 0.1 every 10 epochs) | Linear, Uniform |
Learning rate | [1 × 10−3, 1 × 10−1] | Log-scaled, Uniform |
(Momentum coefficient) | [0.9, 0.999] | Log-scaled, Uniform |
is RMS prop coefficient | [0.9, 1] | Log-scaled, Uniform |
Number of Hidden Units |
|
Minibatch size | 27 |
Learning rate Schedule | None—No change to the learning rate |
) | 0.90034 |
) | 0.9175 |
Learning Rate | 0.028805 |
Diagnostic Criterion | Actual | PM-ECG | GM-ECG | PM-ECG | GM-ECG |
---|---|---|---|---|---|
(Errors in Observations (Errors after Correcting for Intra-Observer Errors)) | |||||
Rhythm | Sinus rhythm (n = 18) | Sinus rhythm (n = 18) | Sinus rhythm (n = 18) | 2(0) | 0 |
Atrial fibrillation with rapid ventricular rate (n = 1) | Atrial fibrillation with rapid ventricular rate (n = 1) | Atrial fibrillation with rapid ventricular rate (n = 1) | |||
Sinus tachycardia (n = 1) | Sinus tachycardia (n = 1) | Sinus tachycardia (n = 1) | |||
PVC (n = 2) | PVC (n = 2) | PVC (n = 2) | |||
Conduction blocks | Left bundle branch block or LBBB (n = 3) | Left bundle branch block or LBBB (n = 3) | Left bundle branch block or LBBB (n = 3) | 0(0) | 0 |
Left anterior fascicular block (n = 1) | Left anterior fascicular block (n = 1) | Left anterior fascicular block (n = 1) | |||
Anatomical findings | Left ventricular hypertrophy (n = 3) | Left ventricular hypertrophy (n = 3) | Left ventricular hypertrophy (n = 4, 1 error) | 0(0) | 1 |
ST-T wave findings (ischemia) | ischemia (n = 4) | ischemia (n = 4) | ischemia (n = 2, 2 errors) | 3(0) | 8 |
Tall T wave (n = 1) | Tall T wave (n = 1) | Tall T wave (n = 0, 1 error) | |||
ST depression (n = 1) | ST depression (n = 1) | ST depression (n = 1) | |||
T wave inversion (n = 2) | T wave inversion (n = 3) | T wave inversion (n = 1, 2 errors) | |||
T wave abnormality (n = 3) | T wave abnormality (n = 2) | T wave abnormality (n = 3, 2 findings don’t match with actual ECG, total errors = 3) | |||
MI region and time of occurrence | recent anterior MI (n = 1) | recent anterior MI (n = 1) | recent anterior MI (n = 1, 1 error) | 1(0) | 4 |
recent inferior MI (n = 1) | recent inferior MI (n = 1) | recent inferior MI (n = 0, 1 error) | |||
old inferior MI (n = 1) | old inferior MI (n = 2, 1 error) | old inferior MI (n = 3, 2 errors) | |||
Miscellaneous or benign findings | left axis (n = 1) | left axis (n = 1) prominent U waves (n = 0) left atrial enlargement (n = 0) | left axis (n = 0) early repolarization (n = 0) | 3(0) | 2(0) |
Total errors | 9 (0) | 15 (13) |
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Shyam Kumar, P.; Ramasamy, M.; Kallur, K.R.; Rai, P.; Varadan, V.K. Personalized LSTM Models for ECG Lead Transformations Led to Fewer Diagnostic Errors Than Generalized Models: Deriving 12-Lead ECG from Lead II, V2, and V6. Sensors 2023, 23, 1389. https://doi.org/10.3390/s23031389
Shyam Kumar P, Ramasamy M, Kallur KR, Rai P, Varadan VK. Personalized LSTM Models for ECG Lead Transformations Led to Fewer Diagnostic Errors Than Generalized Models: Deriving 12-Lead ECG from Lead II, V2, and V6. Sensors. 2023; 23(3):1389. https://doi.org/10.3390/s23031389
Chicago/Turabian StyleShyam Kumar, Prashanth, Mouli Ramasamy, Kamala Ramya Kallur, Pratyush Rai, and Vijay K. Varadan. 2023. "Personalized LSTM Models for ECG Lead Transformations Led to Fewer Diagnostic Errors Than Generalized Models: Deriving 12-Lead ECG from Lead II, V2, and V6" Sensors 23, no. 3: 1389. https://doi.org/10.3390/s23031389
APA StyleShyam Kumar, P., Ramasamy, M., Kallur, K. R., Rai, P., & Varadan, V. K. (2023). Personalized LSTM Models for ECG Lead Transformations Led to Fewer Diagnostic Errors Than Generalized Models: Deriving 12-Lead ECG from Lead II, V2, and V6. Sensors, 23(3), 1389. https://doi.org/10.3390/s23031389