3.1. Direct Coordination of Glycerol to Metal Centres, as H3gly Adduct
The direct coordination of the glycerol molecule to a metal centre, such as an H
3gly ligand, has rarely been described up to now in the literature. To our knowledge, only two previous studies have reported the characterisation of such species in a solid state [
20,
21]. In 2003, Prior and Rosseinsky studied the control of interpenetration and chirality of a family of metal–organic frameworks (MOFs), with the aim of examining, in particular, the role of auxiliary ligands (alcohols and aromatic amines) [
20]. In this context, they isolated new MOFs of formula Ni
3(1,3,5-benzenetricarboxylate)
2(py)
6(glycerol) (
1) in which the molecule of glycerol can be observed as a H
3gly ligand (py = pyridine). Crystals of
1 were obtained by vapour diffusion at room temperature using a multilayer protocol. Interestingly, the authors showed that in
1, the glycerol molecule occupies two distinct coordination modes with respect to the nickel atom, being both bidentate and monodentate in proportions of 45:55, respectively (
Figure 1). According to the authors, monodentate coordination is favoured because it promotes the formation of hydrogen bonds. In both conformations, the geometry of the nickel atom is kept octahedral. The study also includes the design and characterisation by X-ray crystallographic analysis of additional interpenetrating networks using another aromatic amine (pyridine, 4-picoline) and several alcohols (ethylene glycol, 1,2-propanediol, 1,4-butanediol, meso-2,3-butandiol, and 1,2,6-hexanetriol).
Other examples of H
3gly ligands were reported a few years later, in 2006, but they were taken from a single study. Indeed, Naumov, Kim and coworkers described the synthesis and characterisation of six lanthanide salts, isolated as single crystals and consisting of [Re
6Q
8(CN)
6]
4− anions combined with binuclear [Ln
2(H
2gl)
2(H
3gly)
4]
4+ cations (
2: Ln = La, Q = S;
3: Ln = Nd, Q = S;
4: Ln = Gd, Q = S;
5: Ln = La, Q = Se;
6: Ln = Nd, Q = Se;
7: Ln = Gd, Q = Se) [
21]. Crystals of compounds
2–
7 were obtained using the same experimental procedure, first by treating an aqueous solution of lanthanides chlorides with KOH and glycerol, and then by adding a solution of K
4[Re
6S
8(CN)
6] in H
2O. The mixture was then boiled until the precipitation and crystallisation of compounds
2–
7. Yields ranged from 55 to 70%. All the salts crystallised in the triclinic
space group and were iso-structural. All [Ln
2(H
2gl)
2(H
3gly)
4]
4+ cations exhibit a centrosymmetric binuclear structure. Remarkably, the lanthanide atoms of each cation bear two glycerol molecules as chelating ligands but display two distinct coordination modes. One is bidentally linked, while the second is tridentate (
Figure 2, right). The two lanthanide atoms are also linked by two bridging [H
2gly]
− ligands, the coordination of which will be developed more in detail in the next section and shown in
Figure 4. Ln(III) atoms are non-coordinated and exhibit a distorted tricapped trigonal prism geometry environment. The non-coordinated OH groups of the glycerol and glycerolate ligands are involved in intermolecular hydrogen bonding with the nitrogen atoms of the CN groups of the [Re
6Q
8(CN)
6]
4− anions, leading to the expansion of a three-dimensional network (
Figure 3). Compounds
2–
7 were also characterised by mass spectrometry and infrared spectroscopy and their magnetic properties were evaluated. La-based crystals (
2 and
5) are diamagnetic, while Nd- and Gd-based (
3,
4,
6 and
7) are paramagnetic. For compound
2, electrospray ionisation positive mode corroborated the X-ray structure by revealing the presence of an intense signal at
m/
z = 207.2 corresponding to the [La
2(
μ-H
2gly)
2(H
3gly)
4]
4+ fragment. In addition, infrared spectroscopy appears to be well suited to establishing the coordination of glycerol onto metal centres. This is because the
νC−O and
δC−OH characteristic bands are, respectively, shifted to lower frequencies and split, compared to pure glycerol (
Table 1).
Figure 2.
Left: general view of the skeleton of
2 (
Mercury representation, adapted from [
21]). [Re
6Q
8(CN)
6]
4− anion and hydrogen atoms are omitted for clarity (colour code: sky blue—lanthane, red—oxygen, grey—carbon, white—hydrogen).
Right: detail of the coordination of the La atom by the two H
3gly ligands highlighting bidentate and tridentate bindings. Only the hydrogen atoms of OH groups are shown.
Figure 2.
Left: general view of the skeleton of
2 (
Mercury representation, adapted from [
21]). [Re
6Q
8(CN)
6]
4− anion and hydrogen atoms are omitted for clarity (colour code: sky blue—lanthane, red—oxygen, grey—carbon, white—hydrogen).
Right: detail of the coordination of the La atom by the two H
3gly ligands highlighting bidentate and tridentate bindings. Only the hydrogen atoms of OH groups are shown.
Figure 3.
Crystal packing of
2 (
Mercury view, adapted from [
21]). Hydrogen atoms are omitted for clarity. Hydrogen bonds are shown by light blue dotted lines.
Figure 3.
Crystal packing of
2 (
Mercury view, adapted from [
21]). Hydrogen atoms are omitted for clarity. Hydrogen bonds are shown by light blue dotted lines.
Table 1.
Selection of characteristic infrared bands (FTIR) showing the influence of coordination.
Table 1.
Selection of characteristic infrared bands (FTIR) showing the influence of coordination.
Compound/Crystal | Coordination Mode of Glycerol and Glycerolate | νO−H (cm−1) | νC−O (cm−1) | δC−OH (cm−1) | Ref. |
---|
glycerol a | / | 3345 | 1109 1034 | 1331 | [21] |
2 a | H3gly, [H2gly]− | 3500–3250 | 1095 1029 | 1361 1348 1334 | [21] |
3 a | H3gly, [H2gly]− | 3500–3250 | 1095 1028 | 1359 1346 1332 | [21] |
4 a | H3gly, [H2gly]− | 3500–3250 | 1095 1031 | 1359 1346 1332 | [21] |
5 a | H3gly, [H2gly]− | 3500–3250 | 1095 1031 | 1359 1346 1332 | [21] |
6 a | H3gly, [H2gly]− | 3500–3250 | 1095 1029 | 1359 1346 1332 | [21] |
7 a | H3gly, [H2gly]− | 3500–3250 | 1095 1028 | 1357 | [21] |
8 a | [H2gly]− | 3400 | NS | NS | [22] |
9 a | [H2gly]− | 3200 | NS | NS | [23] |
14 a | [Hgly]2− | 3410 | 1110 1063 | NS | [24] |
20 b | [Hgly]2− | 3208 | NS | NS | [25] |
21 c | [Hgly]2−, [gly]3− | 3641 | 1138 1080 | 1380 1315 | [26] |
22 a | [Hgly]2− | 3399 | 1171 1027 | 1384 | [27] |
30 b | [gly]3− | absent | 1100–1000 | absent | [28] |
Table 2.
Comparison of selected structural parameters relevant to the coordination of H3gly in crystals 1–7.
Table 2.
Comparison of selected structural parameters relevant to the coordination of H3gly in crystals 1–7.
Crystal | M−O(alcoholic) (Å) Bidentate Mode | M−O(alcoholic) (Å) Tridentate Mode | M−O(alcoholic)−C (Deg) Bidentate Mode | M−O(alcoholic)−C (Deg) Tridentate Mode | CSD Entry Deposition Number | Ref. |
---|
1 M = Ni | 2.088 | | 105.5 | | HUYKUH 207688 | [20] |
2 M = La | 2.541(7) 2.5730 | 2.554(7) 2.616(9) 2.690(8) | 116.8 125.3(5) | 114.0(7) 118.1(7) 121.1(7) | VEBYIL 269462 | [21] |
3 M = Nd | 2.484(6) 2.559(5) | 2.487(6) 2.541(7) 2.637(6) | 117.6(4) 124.8(4) | 113.9(5) 116.9(5) 120.9(5) | VEBYOR 269463 | [21] |
4 M = Gd | 2.439(5) 2.5632 | 2.457(5) 2.519(5) 2.601(5) | 116.9 125.2(4) | 113.5(4) 117.8(4) 120.0(4) | VEBYUX 269464 | [21] |
5 M = La | 2.546(9) 2.6354 | 2.60(1) 2.6354 2.71(1) | 115.1 124.2(6) | 115.1 118.9(9) 119(1) | VEBZAE 269465 | [21] |
6 M = Nd | 2.474(6) 2.6275 | 2.504(7) 2.547(8) 2.663(7) | 114.9 125.4(5) | 112.7(6) 119.0(7) 118.9(6) | VEBZEI 269466 | [21] |
7 M = Gd | 2.42(1) 2.6312 | 2.44(1) 2.50(1) 2.60(1) | 115.1 125.5(7) | 112(1) 118(1) | VEBZIM 269467 | [21] |
3.2. [H2gly]− Coordination Mode of Glycerolato Ligand to Metal Centres
As indicated previously in
Section 3.1, in addition to H
3gly adducts, compounds
2–7 also contain two [H
2gly]
− ligands. They chelate and bridge the two lanthanide atoms. The result is the formation of a planar Ln
2O
2 central four-membered ring involving the O
− moiety of [H
2gly]
− acting as bridging ligands (
Figure 4).
Figure 4.
View of the coordination of the La atoms of
2 by two bridging [H
2gly]
− ligands (
Mercury representation, adapted from [
21]). Only the hydrogen atoms of OH groups are shown. H
3gly ligands were omitted as they are already shown in
Figure 2 (colour code: sky blue−lanthane, red−oxygen, grey−carbon, white−hydrogen).
Figure 4.
View of the coordination of the La atoms of
2 by two bridging [H
2gly]
− ligands (
Mercury representation, adapted from [
21]). Only the hydrogen atoms of OH groups are shown. H
3gly ligands were omitted as they are already shown in
Figure 2 (colour code: sky blue−lanthane, red−oxygen, grey−carbon, white−hydrogen).
In 1998, Chakravorty and coworkers reported the synthesis and structure of vanadate esters of glycerol and propane-1,3-diol [
22]. They established, in particular, the first X-ray structure of an oxovanadium alkoxide bearing a glycerolato ligand by characterising the mononuclear complex [VO(L)(H
2gly)] (
8) (L = hydroxyphenylmethylenehydrazone of salicylaldehyde) (
Figure 5). From a synthetic point of view, complex
8 was prepared by adding an excess of glycerol to a methanolic solution of VO(acac)
2 (acac = acetylacetonate) and H
2L, mixed under stoichiometric conditions and then warmed in ambient air for ten minutes. Single crystals suitable for an X-ray crystallographic analysis were collected from the resulting dark-coloured solution. Compound
8 crystallises in the monoclinic
P21/
n space group.
The glycerolato ligand is bidentately coordinated to the vanadium atom forming a five-membered V(
O,
O) chelate ring. The V−O distances exhibit distinct values, corresponding to 1.794 (6) and 2.308 (8) Å, which are attributed to the V−O(alkoxide) and V−O(alcoholic) bonds, respectively. The L
2− ligand displays a tridentate ONO coordination leading to five- and six-membered rings. The vanadium atom occupies a distorted octahedral geometry. In the crystal lattice,
8 is organised into infinite chains extending along the
c-axis, via intermolecular hydrogen bonds involving the non-coordinated OH and NH groups of [H
2gly]
2− and L
2−, respectively (
Figure 6). Two other compounds similar to
8 were also synthesised using H
2L, the hydroxyphenylmethylenehydrazone of 4-hydroxy-4-phenylbut-3-en-2-one and 2-hydroxynaphthaldehyde, respectively. It is interesting to note that when the reactions occur in the presence of propane-1,3-diol (H
2pd), instead of glycerol, the coordination of Hpd to the vanadium atom leads to the formation of a six-membered ring with a distorted chair conformation. From a spectroscopic point of view, the authors have shown that the size of the five- and six-membered V(O,O) chelate ring can be discerned from the chemical shifts recorded by
51V NMR, which show a difference of around 30 ppm ([VO(L)(H
2gly)] (
8): −509 ppm, ([VO(L)(Hpd)]: −538 ppm).
Figure 5.
Molecular structure (
left) and geometry atom (
right) of
8 (
Mercury representation, adapted from [
22]). Hydrogen atoms are omitted for clarity, except for those of the glycerolato ligand (colour code: dark grey—vanadium, blue—nitrogen, red—oxygen, grey—carbon, white—hydrogen).
Figure 5.
Molecular structure (
left) and geometry atom (
right) of
8 (
Mercury representation, adapted from [
22]). Hydrogen atoms are omitted for clarity, except for those of the glycerolato ligand (colour code: dark grey—vanadium, blue—nitrogen, red—oxygen, grey—carbon, white—hydrogen).
During the same period and using a similar approach, the same group isolated another specimen of vanadium(V) glycerolate in the form of single crystals, characterised as [VO(L)(H
2gly)] (
9) (L = salicylaldimine of glycine) by X-ray crystallographic analysis [
23]. Complex
9 was synthesised with excellent yield by reacting [VO(L
2)(H
2O)] with glycerol in methanol. Crystals were grown by slow evaporation of a methanolic solution and crystalised in the same crystal system and space group as
8 (monoclinic,
P2
1/
n). As in the case of
8, the vanadium atom of
9 is hexacoordinated describing a distorted octahedral VO
5N coordination. The ligand L is tridentate, through two oxygen atoms and one nitrogen atom, generating the formation of two five- and six-membered rings, respectively (
Figure 7). The glycerolato ligand is bidentately bonded to the vanadium atom in a V(
O,
O) coordination mode, via two oxygen atoms, one alkoxidic, the other alcoholic. However, none of the [H
2gly]
− hydrogen atoms could be precisely located during structural analysis, but the lengths of the V−O bonds clearly corroborate their respective character, i.e., one V−O(alkoxidic) bond [V−O(6) = 1.795(4) Å] and one V−O(alcoholic) bond [V−O(5) = 2.314(5) Å]. The lengths are comparable to those observed for the crystals of
8 in which [H
2gly]
− is similarly coordinated. (
Table 3). In terms of supramolecular assembly, the uncoordinated alcoholic oxygen atom, located on the pendant arm of [H
2gly]
−, is in intermolecular hydrogen interaction with two adjacent molecules. The distances measure 2.611(1) and 2.657(13) Å, contributing to the propagation of infinite sheets (
Figure 8).
In 2010, in the frame of studies on the design of suitable single-molecule magnets (SMM [
29]), Powel’s group reported the synthesis and characterisation of a decanuclear aggregate characterised as [Mn(II)
2Mn(III)
2Dy(III)
6(
μ3-OH)
2(Hgly)
4(H
2gly)
2(PhCO
2)
16(H
2O)
2]·10CH
3CN (
10). Compound
10 was prepared by mixing glycerol, DyCl
3, MnCl
2·4H
2O, benzoic acid and NaN
3 in acetonitrile, in a molar ratio of 2:1:1:5:6 [
30]. Brownish crystals grew after one week at room temperature. The authors described the astonishing structure of 10 as two {Mn(II)Mn(III)Dy(III)
2(
μ3-OH)(
μ3-OR)
3} heterocubane units linked by a central [Dy(III
)2(PhCO
2)
4]
2+ paddle-wheel dimer (
Figure 9, left). It is interesting to note that the skeleton of
10 comprises six glycerolato ligands describing two distinct coordination modes. Two of them are singly deprotonated ([H
2gly]
−), while the other four are doubly deprotonated ([Hgly]
2−). As shown on the right-hand side of
Figure 9, each [H
2gly]
− ligand is directly involved in the structure of one of the Dy
2Mn
2O
4 heterocubane by providing one of the oxygen atoms [O(19) in the figure], triply-bridging. The two outer hydroxyl groups of [H
2gly]
− are also linked to the cubane by coordinating the two dysprosium atoms. The coordination mode of the [Hgly]
2− ligands of 10 is described in
Section 3.3.
As part of their work on the design of catalysts for biodiesel production, Schatte’s group elucidated in the early 2010s the crystallographic structures of two alkali metal glycerolates, solved as [Na(C
3H
7O
3)]
n (
11) and [K(C
3H
7O
3)]
n (
12), and in which glycerol acts as a [H
2gly]
− ligand [
31,
32]. In both cases,
11 and
12 exhibit polymeric structures, describing sheet-like organisations that propagate in the directions of the
b- and
c-axes, and
a and
b, respectively. They crystallise in the monoclinic crystal system, with a
P2
1/
c space group for
11 and a
C2/
m for
12.
The crystals of
11 and
12 were obtained by adding glycerol to hot aqueous solutions of sodium hydroxide and potassium hydroxide, respectively. To be preserved, they must be kept in very basic solutions at room temperature. In [Na(C
3H
7O
3)]
n (
11), sodium atoms are linked to five oxygen atoms provided by four distinct [H
2gly]
− ligands and display a distorted trigonal bipyramidal geometry. Each [H
2gly]
− ligand is linked to the same sodium atom via an alkoxo group and one hydroxo group (from the secondary carbon atom), leading to the formation of five-membered rings. The second hydroxo group of [H
2gly]
− also interacts with an adjacent sodium atom. Moreover, both OH groups of [H
2gly]
− are also involved in O−H···O hydrogen bonds. All these interactions promote the propagation of polymeric sheets (
Figure 10).
Although it also has glycerolate ligands of the [H
2gly]
− type, [K(C
3H
7O
3)]
n (
12) exhibits a different mode of coordination compared to
11. The main difference is that the potassium atom is coordinated by the two hydroxo groups of [H
2gly]
−, which leads to a six-membered chelating ring displaying a distorted boat conformation. Each [H
2gly]
− ligand is involved in the coordination with two distinct potassium cations that exhibit a seven-coordination environment resulting from additional K···O interactions. A representation of the resulting network is depicted in
Figure 11. It consists of parallel polymer sheets propagating along the
a- and
b-axes.
Figure 11.
Polymeric sheet structure of
12 (
Mercury representation, adapted from [
32]). Hydrogen atoms are omitted for clarity (violet—potassium, red—oxygen, grey—carbon, white—hydrogen).
Figure 11.
Polymeric sheet structure of
12 (
Mercury representation, adapted from [
32]). Hydrogen atoms are omitted for clarity (violet—potassium, red—oxygen, grey—carbon, white—hydrogen).
Table 3.
Comparison of selected structural parameters relevant to the coordination of [H2gly]− in crystals 2–12.
Table 3.
Comparison of selected structural parameters relevant to the coordination of [H2gly]− in crystals 2–12.
Crystal | M−O(alcoholic) (Å) | M−O(alkoxide) (Å) | M−O(alcoholic)−C (deg) | M−O(alkoxide)−C (deg) | CSD Entry Deposition Number | Ref. |
---|
2 M = La | 2.592(7) 2.592(8) | 2.383(6) 2.405(7) | 120.0(6) 116.9(7) | 121.2(7) 124.1(7) | VEBYIL 269462 | [21] |
3 M = Nd | 2.547(6) 2.526(6) | 2.349(6) 2.330(5) | 116.3(6) 120.8(5) | 124(1) 119(1) | VEBYOR 269463 | [21] |
4 M = Gd | 2.472(5) 2.511(5) | 2.300(4) 2.315(5) | 120.6(4) 117.6(4) | 120.5(4) 127.2(4) | VEBYUX 269464 | [21] |
5 M = La | 2.598(9) 2.577(8) | 2.410(8) 2.388(9) | 116.1(8) 119.4(7) | 121.0(8) 123.3(8) | VEBZAE 269465 | [21] |
6 M = Nd | 2.556(7) 2.531(6) | 2.362(6) 2.341(6) | 116.7(7) 120.5(6) | 117.6(9) 124.5(9) | VEBZEI 269466 | [21] |
7 M = Gd | 2.51(1) 2.46(1) | 2.333(9) 2.301(9) | 120.8(9) 117(1) | 126.3(9) 121.1(9) | VEBZIM 269467 | [21] |
8 M = V | 2.308(8) | 1.794(6) | 110.5(6) | 123.8(7) | PUSSIF 1239897 | [22] |
9 M = V | 2.312(5) | 1.792(4) | 109.7(9) | 121.2(6) | PUGWUJ 1239014 | [23] |
10 M = Mn, Dy | 2.394(3) a 2.435(4) a | 2.383(4) a 2.363(5) a 2.308(4) b | 114.3(4) c 114.4(4) c | 120.3(3) d 118.3(3) d 112.5(3) d | PUWYIQ 757611 | [30] |
11 M = Na | 2.3551(9) 2.4237(9) 2.3462(10) | 2.3163(9) 2.4243(10) | 110.30(6) 119.44(6) 120.20 (7) | 99.17(7) 132.80(7) | VUYFOL 781197 | [31] |
12 M = K | 2.7726(16) 2.8160(15) 2.8576(15) | 2.690(2) 3.211(2) | 100.13(11) 113.60(12) 124.89(12) | 106.22(15) 154.98(16) | IJIWOO 811145 | [32] |
3.3. [Hgly]2− Coordination Mode of Glycerolato Ligand to Metal Centres
In 1983, Hambley and Snow reported the X-ray crystallographic analysis of zinc(II) monoglycerolate (
13) [
33]. Crystals of
13 were obtained by heating glycerol and zinc oxide at 220 °C. They are monoclinic with a
P2
1/
c space group. Zinc atoms are coordinated with five oxygen atoms from three distinct glycerolato ligands. Their geometry can be described as trigonal bipyramidal. Each glycerolate is bonded to three zinc atoms. The remaining non-coordinated hydroxyl group O(3)H has a hydrogen bonding interaction with the O1 atom [O(3)H···O(1) = 2.541(4) Å]. The O(1) and O(2) alkoxides act as bridging ligands between the zinc atoms (
Figure 12). From a supramolecular point of view, the resulting organisation can be compared to the stacking of independent layers with strong interactions (
Figure 13). Such a structure is easily cleavable, giving zinc glycerol lubricating properties [
34]. In terms of applications, zinc glycerolate is also recognised as a green and effective catalyst in the transesterification of soya oil with methanol to produce fatty acid methyl esters [
35].
In the early 1970s, Slade, Radoslovich and Raupach solved the X-ray structure of cobalt(II) monoglycerolate, Co[C
3H
6O
3] (
14), which is iso-structural to the zinc derivative
13 [
24]. Crystals of
14, magenta in colour, grew from a mixture of glycerol and cobalt acetate that was heated for two days at 140 °C. They crystallise in the monoclinic
P2
1/
c space group. The chemical structure is similar to that described above for the zinc(II) monoglycerate
13. The values for interatomic angles and distances are also comparable (
Table 4). The cobalt atom is located in a trigonal bipyramidal environment coordinated to five oxygen atoms. Although the hydrogen atoms could not be located at the time due to the accuracy of the X-ray data, the singly deprotonated [Hgly]
2− nature of the glycerolate ligand is supported both by an O···O distance of 2.59 Å, typical of a hydrogen interaction, and by characteristic absorption bands recorded by infrared spectroscopy analysis [
ν(O−H) = 3410 cm
−1,
ν(O−H···O) = 2510 cm
−1,
δ(O−H···O) = 1945 cm
−1]. To our knowledge, the crystal structure of
14 corresponds chronologically to the first structural resolution of a metal glycerolate.
During the 1980s, the structural resolution of metal glycerolates continued to attract considerable interest. In 1987, Keller and Riebe published the crystal structure of lead(II) monoglycerolate, revealing a polymeric organisation in its solid state, defined as [Pb(C
3H
6O
3)]
n (
15) [
36]. The compound crystallises in the monoclinic space group
P2
1/
c. The authors reported two methods for obtaining single crystals of
15: either using a sealed ampoule containing a mixture of lead oxide and distilled glycerol and reducing the temperature from 80 °C to room temperature, or from an alkaline solution of plumbate containing glycerol. When this solution is exposed to an atmosphere of acetic acid, colourless needle-shaped crystals are deposited after a few days. Structurally, the lead atom occupies the top of a tetragonal pyramid whose base is occupied by four oxygen atoms from three glycerolate ligands with Pb–O distances in the range of 2.24 to 2.60 Å. Two hydroxyl groups from two [Hgly]
2− ligands also interact with the lead atom via two O(H)··Pb bonds [3.03(3) and 3.08 Å], leading to a coordination described by the authors as [4+2]. The presence of the bridging oxygen atoms O(2) and O(3), linked to separate lead atoms, promotes the propagation of a zigzag polymer chain along the
a-axis (
Figure 14). In the crystal lattice, the chains are linked together through intermolecular hydrogen bonds involving the OH groups of [Hgly]
2− ligands of one chain with the lead atoms of neighbouring chains (
Figure 15). The thermal stability of
15 was also determined, revealing a decomposition temperature of 236 °C with the formation of Pb–O.
Very recently, as part of investigations into metal alkoxides, Ruck’s group published a much faster synthesis route, which produces compound
15 with a 94% yield [
37]. The method described involves mixing Pb(OAc)
2·3H
2O with glycerol, and then adding an aqueous solution of NaOH. The mixture was then heated for five minutes at 140 °C under reflux conditions. The authors obtained a powder pattern comparable to the pattern calculated from the crystal structure published in 1987 by Keller and Riebe [
36], as well as a degradation temperature for
14 of around 230 °C. In addition, they confirmed by infrared spectroscopy the presence of broad stretching bands resulting from the presence of the OH groups of the glycerolato ligands.
Figure 14.
Polymeric structure of
15 (
Mercury representation, adapted from [
36]). Hydrogen atoms are omitted for clarity (colour code: dark grey—lead, red—oxygen, grey—carbon).
Figure 14.
Polymeric structure of
15 (
Mercury representation, adapted from [
36]). Hydrogen atoms are omitted for clarity (colour code: dark grey—lead, red—oxygen, grey—carbon).
Figure 15.
Mercury representation showing the network formed by hydrogen bonds (light blue dotted lines) between the chains of
15 (adapted from [
36]).
Figure 15.
Mercury representation showing the network formed by hydrogen bonds (light blue dotted lines) between the chains of
15 (adapted from [
36]).
In 1988, Wild and coworkers reported the crystal structure of (1,2-C
6H
4(PPhMe)
2)Pt(1,2-glycerolate)·2MeOH (
16) resulting from treatment at 20 °C and in a mixture of benzene–methanol of [Pt(OMe)
2{1,2-C
6H
4(PMePh)
2}] with one equivalent of glycerol [
38]. In the solid state, the platinum atom, which occupies a classical square planar geometry, is doubly chelated by one (1,2-C
6H
4(PPhMe)
2) ligand and one doubly deprotonated glycerolato ligand. The result is the formation of two five-membered metallacycles. In addition, the remaining hydroxyl group of [Hgly]
2− is in intermolecular hydrogen interaction with an alkoxo oxygen of a neighbouring complex molecule [O(3)H···O(1) = 2.666(8) Å] forming a centrosymmetric dimer aggregate (
Figure 16).
In 1997, as part of a study devoted to polyol metal complexes [
39], Klüfers and coworkers reported on the characterisation of multinuclear cuprates(II) with deprotonated glycerol as a ligand. Among the complexes described in the study, one prepared from glycerol, copper(II) hydroxide and barium hydroxide, in solution in water, was characterised by single-crystal X-ray diffraction as Ba
2(ox)[Cu
2(μ-OH)
2(Hgly)
2]·10H
2O (
17) (ox = oxalate), isolated as blue triclinic crystals. Complex
17 contains two glycerolato [Hgly]
2− ligands, each chelating a copper atom and a barium atom (
Figure 17). However, significantly different distances were observed for Cu−O and Ba−O bonds involving [Hgly]
2− (
Table 4). The hydroxyl group O(3)H of [Hgly]
2− interacts with the barium atom through a long Ba−O distance (2.847(3)Å) and also with a surrounding molecule by hydrogen bonding. The O(2) atom bridges both a copper atom and a barium atom. Interestingly, the authors explain the presence of the two oxalate ligands, which chelate the two barium atoms, by the oxidation of glycerol in the presence of an aqueous alkaline copper solution. They refer to work dating back to 1936 by Traube and Kuhbier, who had already reported on the oxidation of polyols under such reaction conditions [
40].
In 1999, Klooster and Voss reported the single-crystal X-ray structure determination of three platinum(II) mononuclear complexes being galactitolate, glycerolate and erythritolate ligands [
41]. These compounds were synthesised in glovebox conditions, in CH
2Cl
2, by reacting (dppp)Pt(CO
3) (dppp = 1,3-bis(diphenylphosphino)propane) with galactitol, glycerol and erythritol, respectively [
42]. Suitable single crystals of sugar alcoholate complexes were obtained by slow vapour diffusion of CH
2Cl
2 solutions of complexes layered by ether. With regard to the structure of the glycerol derivative, (dppp)Pt(II)(1,2-glycerolate) (
18), the platinum atom describes a square planar geometry, bis-chelated, on one side by a dppp ligand and on the other, by [Hgly]
2−, leading to the formation of two rings with six and five members, respectively (
Figure 18). The ring of the dddp chelate displays a flattened boat conformation, while the ring resulting from the coordination of the glycerolate dianion exhibits a twist conformation. Although the hydrogen atom could not be precisely located, the authors support the presence of a free hydroxyl group on the glycerolato ligand [O(3)], which is corroborated by the O(2)···O(3) distance [2.65(3) Å], indicating the presence of an intramolecular hydrogen bond. The structural parameters determined for
18 are comparable to those for complex
15, although a slight difference is pointed out by the authors for the value of the angle P−Pt−P [87.28(8)° for
15, 92.0(2)° for
18].
As part of their research into synthesising high spin Mn(II)/Mn(III) clusters with magnetic behaviour (for single molecule magnetism application), in 2008, Powell and coworkers reported the synthesis and isolation of a Mn(
III)
12Mn(
II)
9 aggregate characterised as [{Mn(III)
12Mn(II)
9(
μ4-O)
8-(Hgly)
12(
μ-1,1-N
3)
6(OH
2)
6(N
3)
1.
5}{Mn(II)(
μ-1,3-N
3)
4.
5(OH
2)
1.
5}]Cl
4·7.5H
2O (
19) [
43]. From a synthetic point of view, compound
19 was prepared by adding MnCl
2·4H
2O to a solution of glycerol in methanol. Slow evaporation at room temperature led, after three weeks, to the formation of black prism-shaped crystals. Compound
19 crystallises in the cubic space group
Pa
and the authors compared its structure to the interlocking of concentric Archimedan polyhedra. The centre of the oxocluster is occupied by a cation Mn(II). Twelve doubly deprotonated glycerolate ligands with the same coordination mode are present in the skeleton of
18. The deprotonated oxygen atoms of [Hgly]
2−, in particular O(9) and O(10) as shown in
Figure 19, are bridging atoms. They each interact with two manganese atoms. The remaining hydroxyl group of [Hgly]
2−, O(8)H, is, however, simply connected and is linked to a single Mn atom.
The decanuclear aggregate [Mn(II)
2Mn(III)
2Dy(III)
6(
μ3-OH)
2(Hgly)
4(H
2gly)
2(PhCO
2)
16(H
2O)
2]·10CH
3CN (
10), already described in the previous
Section 3.2 [
30], also contains four [Hgly]
2− ligands in addition to the two [H
2gly]
− ligands. The doubly deprotonated ligands participate in pairs in the skeleton of the two Dy
2Mn
2O
4 heterocubanes forming part of the structure of
10. Their central oxygen atoms, O(23) and O(26), are triply bridging (
μ3), occupying two vertices of the cubane. Each is linked to two manganese atoms, Mn(2) and Mn(1), and to one dysprosium atoms, Dy(3) and Dy(2), respectively. The second alkoxo groups, O(21) and O(25), act as
μ2 ligands, bridging one manganese atom of cubanes and one dysprosium atom of the central dimer, Mn(1) and Dy(1). The hydroxo groups of [Hgly]
2−, O(22) et O(24), are linked to two dysprosium atoms of cubanes, Dy(2) and Dy(3) (
Figure 20).
With the increase in glycerol production, mainly from the biodiesel industry, glycerol derivatives are also booming and attracting a lot of interest [
44]. This is particularly the case of glycerol carbonate (4-hydroxymethyl-1,3-dioxolan-2-one), which has a cyclic carbonate function and a pendant hydroxyl arm. This bifunctional molecule, recognised as harmless and environmentally friendly, is appropriate for a wide range of applications (protic solvent, substitute of ethylene and propylene carbonate, electrolytes for lithium batteries and cosmetic ingredients…) [
45]. Synthetically, glycerol carbonate is readily available via transesterification reactions by reacting glycerol with linear dialky carbonates, alkylene carbonate and urea [
46]. In the late 2000s and based on previous investigations on the direct carbonation of alcohols [
47,
48], the research groups of Ballivet-Tkatchenko and Behr investigated the synthesis of glycerol carbonate from CO
2 and glycerol using diorganotin(IV) complexes as precatalysts—organotin derivatives are known to be highly reactive towards carbon dioxide, and structural data reflecting this behaviour had recently been reviewed [
49,
50]. As part of this work, they demonstrated the possible coordination of glycerol to tin centres by isolating the di-
tert-Bu
2Sn(1,2-glycerolate) complex (
20) [
25]. Compound
20 was synthesised by heating in toluene, under reflux conditions in a Dean–Stark apparatus, an equimolar mixture of di-
tert-butyltin oxide and glycerol. Suitable colourless single crystals were obtained by cooling down a hot solution of
20 in either toluene or CHCl
3. The X-ray structure of
20 can be described as an inorganic dimeric skeleton based on a centrosymtric Sn
2O
2 four-membered ring. Each tin atom adopts a distorted trigonal bipyramidal geometry and is chelated by a bidentate 1,2-glycerolate ligand forming a five-membered ring. The two
tertio-butyl groups of each tin atom are located in the equatorial plane. One of the oxygen atoms of 1,2-glycerolate, O(1), links to Sn, providing the dimeric structure of
20. The remaining hydroxyl group of [Hgly]
2−, linked to C(3), is in hydrogen interaction with the oxygen atom O(2) of a neighbouring dimeric unit. The result is the formation of a polymeric chain that propagates along the
c-axis (
Figure 21). In the infrared spectrum (ATR mode), the presence of the hydroxyl group is highlighted by a broad absorption band at 3208 cm
−1. However, in terms of reactivity, the authors reported that
20 does not react with CO
2 at ambient conditions, probably resulting in its oligomeric character. The authors also investigated the reactivity of
n-butyl tin derivatives with glycerol, using
n-Bu
2Sn(OCH
3)
2 and
n-Bu
3SnOCH
3 as precursors. Infrared spectroscopy measurements and elemental analyses confirmed the formation of di-
n-butyltin glycerolate derivatives, but to date, the structures have not yet been confirmed by single-crystal X-ray diffraction analysis.
The synthesis and characterisation of calcium glycerolates have been the subject of much interest in the last century [
51,
52,
53]. Today, they are still widely studied as catalysts for transesterification and polymerisation reactions [
54,
55]. In 2013, Cabeza, Granados and coworkers solved the X-ray structure of Ca(C
3H
7O
3)
2 (
21) [
26]. Synthetically, compound
21 was prepared from fresh CaO obtained by calcining CaCO
3, then heated to 50 °C in a methanol–glycerol mixture in a hermetically sealed flask and under an inert atmosphere. The crystal structure of
21 reveals the presence of isolated tetramers of the formula Ca
4(C
3H
7O
3)
8 whose inorganic core consists of a Ca
4O
4 cubane (
Figure 22). Two types of glycerolato ligands decorate the central cube. Four [Hgly]
2− ligands chelate the four calcium atoms via two of their oxygen atoms, leading to the formation of five-membered rings. The remaining -CH
2OH group of each [Hgly]
2− is oriented towards neighbouring tetramers via hydrogen bond interactions. However, the hydrogen atoms were not located when the structure was solved, but infrared spectroscopy data (DR mode) also confirmed this interpretation (
Table 1). In addition, the structure of
21 also includes four [gly]
3− ligands whose coordination will be described in
Section 3.4. The four calcium atoms of
21 are thus coordinated with seven oxygen atoms, describing a pentagonal bipyramidal geometry.
In 2016, Wei and coworkers published the preparation of unprecedented diol functionalised Anderson-type polyoxometallates (POMs) [
27]. In particular, as part of this work, they reported the single-crystal X-ray diffraction of [TBA]
3{[CHOH(CH
2O)
2]CrMo
6O
18(OH)
4} (
22) (TBA = tetrabutylammonium). Compound
22 was obtainded by mixing an aqueous solution of [NH
4]
3[CrMo
6O
18(OH)
6] to a solution of glycerol dissolve in HCl (1 M). After heating at 100 °C for three hours under reflux conditions and the addition of [TBA]Br, a pink crystalline product corresponding to
22 was isolated with a 66% yield. Compound
22 crystallises in the monoclinic
P2
1 space group. The molecular structure reveals the presence of a doubly deprotonated glycerolate ligand, [Hgly]
2−, attached to the heteropoly [CrMo
6O
18(OH)
4]
− anion via four Mo–O bonds and two Cr–O bonds (
Figure 23). The oxygen atoms of [Hgly]
2− are thus triply bridging (−
μ3), and the resulting interatomic distances are significantly different (
Table 4). The secondary alcohol function of glycerol is maintained intact but does not interact supramolecularly. Compound
22 was also characterised by infrared spectroscopy (transmission mode) and mass spectrometry (ESI), in acetonitrile, revealing a mass cluster at
m/
z = 1559.66 assigned to the {(TBA)
2{[CHOH(CH
2O)
2]CrMo
6O
18(OH)
4}} moiety. Two other specimen of alkoxo-derivatised Anderson POM clusters were obtained using (HOCH
2)
3CNH
2 and (HOCH
2)
2(C
2H
5)CNH
2 instead of glycerol.
Recently, in 2019, Dybstev and coworkers reported the synthesis and the X-ray crystallographic characterisation of a series of five new zinc(II)-thiophene-2,5-dicarboxylate MOFs referred to as the NIIC-10 series [
56]. These buildings are based on 3D porous structures consisting of dodecanuclear zinc(II) carboxylate wheels whose inner walls are decorated with deprotonated polyatomic alcohols (coming from ethylene glycol, 1,2-propanediol, 1,2-butanol, 1,2-pentanediol, and glycerol). Their structures are similar. Among the compounds described in the study, one, characterised as [Zn(tdc)
6(Hgly)
6(dabco)
3] (
23) (tdc = thiophene-2–5-dicarboxylate, dabco = 1,4-diazobicyclo [
2,
2,
2]octane), was prepared using glycerol. Colourless hexagonal prismatic crystals were obtained by adding glycerol to a mixture of Zn(NO
3)
2·6H
2O, H
2tdc, dabco and DMF (heated in a close vial at 130 °C for 2 days). Compound
23 crystallises in the trigonal
Rm space group. Glycerol molecules are localised within the MOF channels and are present in the form of deprontonated glycerolate ligands, [Hgly]
2−, chelating zinc atoms to form five-membered metallacycles. Zinc atoms have two distinct types of coordination geometry, alternately tetrahedral and square-bipyramidal. Interestingly, all [Hgly]
2− ligands conserve a pendant -CH
2OH arm, non-coordinated (
Figure 24). This particular arrangement, compared by the authors to that of a cyclodextrin, results in great CO
2/N
2 and CO
2/CH
4 adsorption selectivities, as well as alkali metal cation adsorption properties.
The following year, in 2020, the same research group designed a new family of mesoporous MOFs, referred to as the NIIC-20 series and based on dodecanuclear wheel-shaped carboxylate building blocks [Zn
12(iph)
6(glycol)
6(dabco)
3] [
57]. Among these new buildings, one, characterised as [Zn(iph)
6(Hgly)
6(dabco)
3] (
24) was also synthesised from glycerol added to a mixture of Zn(NO
3)
2·6H
2O, isophtalic acid and dabco in DMF (heated at 130 °C for 48 h). From a structural point of view, the framework structure of
24 is comparable to
23, describing also a nanocage, and the [Hgly]
2− ligands are similarly coordinated to zinc atoms. The discrepancy lies mainly in the carboxylate linkers, tdc for
23 and iph for
24, which generate geometrical differences. In terms of properties, the NIIC-20 MOFs are considered promising materials for the purification of ethylene from ethane.
Figure 24.
Molecular structure of
23 (
Mercury representation, adapted from [
56]). The carbon atoms of the six [Hgly]
2− ligands are shown in pale yellow to highlight their location inside the Zn
12 wheel (colour code: green—zinc, red—oxygen, blue—nitrogen, yellow—carbon, white—hydrogen). Hydrogen atom and dabco molecules are omitted for clarity.
Figure 24.
Molecular structure of
23 (
Mercury representation, adapted from [
56]). The carbon atoms of the six [Hgly]
2− ligands are shown in pale yellow to highlight their location inside the Zn
12 wheel (colour code: green—zinc, red—oxygen, blue—nitrogen, yellow—carbon, white—hydrogen). Hydrogen atom and dabco molecules are omitted for clarity.
Table 4.
Comparison of selected structural parameters relevant to the coordination of [Hgly]2− in crystals 10 and 13–23.
Table 4.
Comparison of selected structural parameters relevant to the coordination of [Hgly]2− in crystals 10 and 13–23.
Crystal | M−O(alcoholic) (Å) | M−O(alkoxide) (Å) | M−O(alcoholic)−C (Deg) | M−O(alkoxide)−C (Deg) | CSD Entry Deposition Number | Ref. |
---|
10 M = Mn, Dy | 2.382(6)a 2.413(3)a | 2.326(4) a 2.351(3) a 2.515(5) a 2.528(4) a 1.883(4) b 1.895(4) b 1.929(4) b 1.940(4) b 2.284(4) b 2.295(4) b | 122.3(3) c 125.3(4) c | 110.5(3) c 111.7(3) c 119.5(3) c 122.9(3) c 116.5(3) d 117.0(4) d 122.2(3) d 123.3(4) d 126.5(3) d 127.2(3) d | PUWYIQ 757611 | [30] |
13 M = Zn | 2.112(3) | 1.973(3) 1.976(3) 2.009(3) 2.142(3) | 108.5(2) | 97.2(4) 107.1(2) 110.6(2) 115.5(2) 120.0(2) | QQQAZD01 1243918 | [33] |
14 M = Co | 1.978 | 1.951 1.971 1.980 2.073 | 106.26 | 109.15 103.67 113.75 124.21 | GLYCCO10 116949 | [24] |
15 M = Pb | | 2.24(3) 2.28(3) 2.33(3) 2.60(2) | | 104(2) 117(2) 123(2) 126(2) | FOGXUU 1158502 | [36] |
16 M = Pt | | 2.028(5) 2.039(6) | | 107.0(5) 109.8(5) | GETKUL 1166513 | [38] |
17 M = Ba, Cu | 2.847(3) e | 1.924(2) f 1.950(2) f 2.821(3) e | 114.3(2) g | 101.6(2) g 108.7(2) h 110.2(2) h | TIDTOP 127080840 | [39] |
18 M = Pt | | 1.985(16) 2.025(15) | | 108(1) 110(2) | HOLGOE 133897 | [41] |
19 M = Mn | 2.1744 2.2254 | 1.8751 1.8875 2.1341 | 107.81 113.82 | 111.33 113.72 114.03 | TONBAA 693464 | [43] |
20 M = Sn | | 2.0694(17) 2.0860(18) 2.2481(17) | | 111.44(15) 112.14(15) 135.55(15) | HOPKUU 889174 | [25] |
21 M = Ca | | 2.506(6) 2.579(6) | | 115.4(4) 118.6(4) | LEYYOF 828033 | [26] |
22 M = Cr, Mo | | 1.982(7) i 1.988(6) i 2.350(6) j 2.364(6) j 2.383(6) j 2.390(6) j | | 116.5(5) k 118.0(5) k 119.2(5) l 119.5(5) l 120.8(5) l 122.7(5) l | ZUZVUN 1422707 | [27] |
23 M = Zn | | 1.897 1.993(4) 1.993(7) | | 111.4(7) 115.8(8) 119.3 | TOYYEO 1885440 | [56] |
24 M = Zn | | 1.89 1.99 | | 110.8 128.0 | WUTHOL 2005258 | [57] |
3.4. [Hgly]3− Coordination Mode of Glycerolato Ligand to Metal Centres
In 1898, while working on the reactivity of alkali salts with glycerol, Bullnheimer reported the formation of LiCuC
3H
5O
3·6H
2O (
25), characterised as elongated dark blue crystals. They were obtained by mixing glycerol with copper(II) acetate in the presence of lithium hydroxide, and in a mixture of water and ethanol [
58]. Almost 100 years later, in 1993, Klaassen and Klüfers reproduced the reaction and successfully solved the structure of
25 by single-crystal X-ray diffraction [
59]. Crystals of
25 crystallise in the trigonal
Pc1 space group. The inorganic framework of
25 is based on a central Cu
3O
3 core tricuprate(II) ions exhibiting Cs-symmetry, consisting of a six-membered ring in chair conformation, and alternating oxygen and copper atoms. Three deprotonated glycerolato ligands complete the tricuprate ion structure; each coordinated with two distinct copper atoms. The central alkoxo group of each [gly]
3– bridges two copper atoms. The coordination of the three [gly]
3− ligands generates six five-membered chelate rings surrounding the central core. Cu(II) ions adopt a square planar geometry (
Figure 25).
A few years later, in 1997, Klufers’ group isolated two new copper(II) complexes including exclusively deprotonated glycerol as ligands: Na
3[Cu
3(gl)
3]·7H
2O (
26) and Na
3[Cu
3(gly)
3] ⅓NaNO
3 10H
2O (
27) [
39]. In the same study, the authors also described Ba
2(ox)[Cu
2(
μ-OH)
2(Hgly)
2]·10H
2O (
17) which has already been commented on in
Section 3.3, being endowed with [Hgly]
2−ligands. Compound
26 was prepared by mixing glycerol, copper(II) hydroxide and sodium hydroxide in water giving within two weeks, blue monoclinic crystals. Compound
27 was prepared by replacing copper(II) hydroxide with copper(II) nitrate, according to the method previously described by Bullnheimer [
58]. Crystals of
27 were isolated as blue hexagonal plates. The inorganic structures of
26 and
27 are identical and are also based on a central Cu
3O
3 tricuprate(II) core comparable to compound
25. The glycerolate ligands are positioned and coordinated to copper centres in the same way. The main difference is that for
26 and
27, the Cu
3O
3 inorganic ring is capped by a sodium atom which interacts (with distances ranging from 2.3 to 2.9 Å) with oxygen atoms of the central alkoxo groups, O(2), of the [gly]
3– ligands (
Figure 26).
In 2006, as part of their bioinorganic-oriented work, Klüfers and coworkers demonstrated that the ReI(CO)
3 fragment is a suitable platform for polyol coordination [
60]. Among the crystals isolated and described in the study, two included a glycerolato ligand acting as [gly]
3−: (DBUH)
2[Re
3(CO)
9(
μ3-O)(
μ3-gly)]·0.5MeCN (
28) and (NEt
4)[Re
3(CO)
9(
μ3-OMe)(
μ3-gly)] (
29). Compound
28 was prepared from an acetonitrile solution containing (NEt
4)
2[Re(CO)
3Br
3] and glycerol, in the presence of 1,4-diazabicyclo[2,2,2]octane (DBU) and a drop of water. The mixture was heated at 85 °C for 6 h. Pale yellow crystals then grew at 4 °C. Concerning
29, isolated as colourless crystals, the synthesis is similar except that the drop of water is replaced by a drop of methanol. In both compounds, the fully deprotonated glycerolato ligand, [gly]
3−, is linked to the rhenate(I) trinuclear framework via its three oxygen atoms, each bridging two separate rhenium atoms (
Figure 27). In
28, the Re
3 skeleton is also coordinated by a
μ3-oxo ligand from a water molecule, while in
29 the same position is occupied by a
μ3-methoxo ligand from a methanol molecule. The [Re
3(CO)
9(
μ3-O)(gly)]
2− and [Re
3(CO)
9(μ
3-OMe)(gly)] moieties were also confirmed by fast atom bombardment mass spectroscopy (FAB-MS), revealing mass clusters at
m/
z = 916.8 and 930.8, respectively. The study also comprises the synthesis and structural characterisation of six other complexes resulting from reactions with three diols ((1
R,2
R)-cyclohexane-1,2-diol, anhydroerythritol, (1
S,2
S)-cyclopentane-1,2-diol) and three other triols (methyl-
β-
D-Ribopyranoside,
L-threitol,
D-arabitol).
In 2012, Raptis and coworkers published the synthesis and characterisation of three new polynuclear Cu(II)-pyrazolato complexes [
28]. This type of compound is of interest in terms of its magnetic and electrochemical manipulations [
61]. One of the compounds described in this study, which was characterised by single-crystal X-ray diffraction, reveals the presence of two fully deprotonated glycerolato ligands within its structure. Cu
II8(
μ3-
κ3,
κ2,
κ2-gly)
2(
μ-3,5-Me
2-pz)
8(3,5-Me
2-pzH)
2(PhCOO)
2] (
30) was isolated fortuitously by mixing Cu(OH)
2, benzoic acid, 3,5-dimethylpyrazole and triethylamine in an acetonitrile solution. The authors explain the presence of glycerolato ligands by the fact that the commercial source of Cu(OH)
2 is stabilised by glycerol. Compound
30 grew at room temperature as a blue plate-like crystal crystallising in the
triclinic space group. Compound
30 consists of an octanuclear Cu
8 complex whose structure can be viewed as two Cu
3 triangles linked by two copper centers. This assembly generates an ellipsoidal ring that hosts two glycerolato ligands ([gly]
3−) which show comparable coordination modes to copper centres (
Figure 28). The oxygen atom of the central alkoxo group, O(1), is triply bridging (
μ3) and linked to three distinct copper atoms, while the other two oxygen atoms, O(2) and O(3) from the two other alkoxo groups, bridge two copper atoms.
Recently, in 2019, as part of a study devoted to metal alkoxides, Ruck and coworkers reported the synthesis and characterisation of tin and lead alkoxides of ethylene glycol and glycerol [
37]. From glycerol, they isolated, as single crystals, the mixed-valent tin(II,IV) glycerolate, Sn
5(C
3H
5O
3)
4 (
31) and the lead(II) glycerolate, Pb(C
3H
6O
3) (
15), already described in
Section 3.3. Single crystals of
31 were obtained using a PTFE-lined autoclave, heated to 250 °C for 4 h and containing a mixture of tin(II) oxalate and glycerol. Compound
31 crystallises in the tetragonal space group
P4
2/
n and contains Sn
2+ et Sn
4+ ions in an arrangement shown in
Figure 29 (left). Glycerol is exclusively present as a triply deprotonated ligand, [gly]
3−. Each of the three oxygen atoms of [gly]
3− is linked to two tin atoms (
Figure 29, right). Consequently, the Sn
2+ atoms are tetra-coordinated and occupy the top of a square-based pyramid, while the Sn
4+ atoms are octa-coordinated and are located at the centre of triangular dodecahedrons. The authors confirmed the absence of free hydroxyl groups by infrared spectroscopy (ATR mode) and demonstrated the stability of the crystals in air up to 300 °C by DTA-TGA experiments.
In 2022, Kubiak’s group reported the synthesis and characterisation of a series of (OR)
3Sn-capped trinuclear nickel clusters [
62]. The typical structure of this family of compounds, described as a tin platform, is claimed to favour their reactivity, particularly with small molecules [
63]. In this recent study, the authors described the reactivity of [Ni
3(dppm)
3(
μ3-Cl)(
μ3-Sn(OEt)
3] (dppm = diphenylphosphinemethane) towards ten equivalents of glycerol, leading to the formation of the new cluster [Ni
3(dppm)
3(
μ3-Cl)(
μ3-Sn(gly)] (
32). To our knowledge, this is the most recent example of coordination involving the [gly]
3− ligand. Single crystals were obtained using vapour diffusion of diethyl ether into a THF solution of
32 at −20 °C. The inorganic framework consists of three nickel atoms supported by three bridging dppm ligands, forming a triangular base capped by a tin atom (
μ3) and a chlorine atom (
μ3). In addition, one molecule of glycerol in its triply deprotonated form, [gly]
3−, also caps the tin atom (
Figure 30). The three alkoxide groups are linked to tin with Sn–O bond lengths of the same order (
Table 5). The tin atom is thus hexa-coordinated and its geometry can be described as trigonal prismatic.
Finally, compound
21 was already described in
Section 3.3. (relating to [Hgly]
2− coordination mode) and exhibits a tetrameric structure defined as Ca
4(C
3H
7O
3)
8 [
26], and also contains four [gly]
3− ligands, in addition to the four doubly deprotonated [Hgly]
2− ligands. The four [gly]
3− ligands are directly involved in the construction of the Ca
4O
4 cubane, respectively, providing the four oxygen atoms. The central alkoxo groups of [gly]
3−, O(5), act as
μ3 ligands and are linked to three distinct calcium atoms. The two remaining alkoxo oxygen atoms, O(4) and O(6), are uniquely bonded to two separate calcium atoms, giving rise to two five-membered rings. A total of eight rings are located around the cubane (
Figure 31).
Figure 31.
Molecular structure of
21 (M
ercury representation, adapted from [
26]) highlighting the four [gly]
3− ligands whose carbon atoms are shown in pale yellow. The carbon atoms of the four [gly]
2− ligands are shown in pale yellow (colour code: green—calcium, red—oxygen, yellow—carbon ([gly]
3−), grey—carbon ([Hgly]
2−)).
Figure 31.
Molecular structure of
21 (M
ercury representation, adapted from [
26]) highlighting the four [gly]
3− ligands whose carbon atoms are shown in pale yellow. The carbon atoms of the four [gly]
2− ligands are shown in pale yellow (colour code: green—calcium, red—oxygen, yellow—carbon ([gly]
3−), grey—carbon ([Hgly]
2−)).
Table 5.
Comparison of selected structural parameters relevant to the coordination of [gly]3− in crystals 21 and 25–31.
Table 5.
Comparison of selected structural parameters relevant to the coordination of [gly]3− in crystals 21 and 25–31.
Crystal | M−O(alkoxide) (Å) | M−O(alkoxide)−C (deg) | CSD Entry Deposition Number | Ref. |
---|
21 M = Ca | 2.371(6) 2.388(5) 2.446(6) 2.485(5) 2.506(6) 2.510(7) 2.579(6) | 112.3(4) 114.1(5) 115.4(4) 118.0(4) 118.6(4) 120.8(4) 122.1(4) | LEYYOF 828033 | [26] |
25 M = Cu | 1.907(7) 1.924(8) 1.950(7) 1.966(6) | 106.8(5) 107.5(7) 108.3(5) 109.5(7) 109.5(6) | JUYKAP 1191635 | [59] |
26 M = Cu, Na | 1.891(3) a 1.895(4) a 1.898(4) a 1.909(4) a 1.910(4) a 1.935(3) a 1.936(4) a 1.945(3) a 1.951(2) a 1.955(3) a 2.386(3) b 2.393(4) b 2.405(4) b 2.445(4) b 2.796(3) b 2.895(3) b | 105.4(2) c 108.0(3) c 108.1(3) c 108.4(3) c 109.3(3) c 109.5(3) c 109.6(3) c 109.7(3) c 124.1(3) d 132.5(2) d 133.1(3) d 133.1(3) d 136.5(3) d 123.7(2) d | TIDTIJ 1270839 | [39] |
27 M = Cu, Na | 1.895(6) a 1.924 a 1.933(4) a 1.934 a 1.940(5) a 1.957 a 2.351 b 2.908 b | 106.7 c 107.3 c 107.8(4) c 108.0(4) c 108.8 c 126.7 d 127.9 d | TIDTUV 103461 | [39] |
28 M = Re | 2.111(5) 2.117(4) 2.127(5) 2.130(5) 2.137(4) 2.168(5) 2.174(5) 2.220(5) | 109.1(5) 120.1(5) 112.8(4) 112.8(4) 106.6(5) 118.2(5) | VEHNUS 292788 | [60] |
29 M = Re | 2.131(7) 2.141(6) 2.157(7) | 108.6 110.6(8) 117.1 | VEHPAA 292789 | [60] |
30 M = Cu | 1.920(9) 1.923(9) 1.929(6) 1.935(7) 1.940(8) 1.946(8) 1.947(8) 1.952(7) 1.962(8) 1.999(8) 2.020(5) 2.193(8) 2.237(8) | 105.5(7) 107.0(6) 108.4(6) 108.6(6) 111.2(7) 111.6(7) 115.3(6) 118.4(7) 119.3(7) 119.5(7) 120.9(7) 121.2(7) 122.9(7) 126.9(6) | DEGBIC 876485 | [28] |
31 M = Sn | 2.111 2.112(3) 2.149(3) 2.228 2.309(3) | 113.7(3) 114.1(2) 115.7 117.0 131.0(3) 132.2(3) | BOLMUN 1939474 | [37] |
32 M = Sn | 2.0416(16) 2.0580(15) 2.0645(14) | 94.5(2) 106.7(2) 111.7(2) | NEPGOI 2163770 | [62] |