Survey of Transfer Learning Approaches in the Machine Learning of Digital Health Sensing Data
Abstract
:1. Introduction
2. Digital Health Sensing Technologies
2.1. Portable Sensing Technologies
2.1.1. Wearable and Attachable Sensing Technologies
- Blood-Pressure-Monitoring (BPM) Technology
- Cardiac Monitor Technology
- Wearable Mental-Health-Monitoring Technology
- Wearable Sleep Technology
- Wearable Noninvasive Continuous-Glucose-Monitoring Technology
- Wearable Activity-Recognition Technology
- Wearable Mouth-Based Systems Technology
- Smart Shoes Technology
- Tear Biomarker Monitoring Using Eyeglasses-Nose-Bridge Pad Technology
- Attachable Patch/Bands for Sweat-Biomarker-Monitoring Technology
2.1.2. Implantable Sensing Technology
- Glucose Monitoring: Implantable glucose sensors can be used to monitor blood sugar levels in people with diabetes [110]. These devices can continuously measure glucose levels and send data to a handheld device or smartphone, allowing patients to adjust their insulin dosages as needed.
- Neurological Monitoring: Implantable sensors can be used to monitor the brain activity in people with epilepsy, helping doctors to diagnose and treat the condition [112]. They can also be used to monitor intracranial pressure in people with traumatic brain injuries.
2.1.3. Ingestible Sensing Technology
- pH sensors are used to measure the acidity or alkalinity of the digestive system. These sensors can be used to diagnose conditions like acid reflux, gastroesophageal reflux disease (GERD), and Helicobacter pylori infection.
- Temperature sensors are used to measure the temperature of the digestive system. These sensors can be used to monitor body temperature and detect fever, as well as to diagnose conditions like Barrett’s esophagus and inflammatory bowel disease.
- Pressure sensors are used to measure the pressure within the digestive system. These sensors can be used to diagnose conditions like gastroparesis, achalasia, and other motility disorders.
- Electrolyte sensors are used to measure the levels of various electrolytes within the body, including sodium, potassium, and chloride. These sensors can be used to monitor electrolyte imbalances and diagnose conditions like dehydration and electrolyte disorders.
- Glucose sensors are used to measure blood sugar levels within the body. These sensors are commonly used to monitor glucose levels in people with diabetes.
- Drug sensors are used to monitor the absorption and distribution of medications within the body. These sensors can be used to optimize drug formulations and dosages for better treatment outcomes.
- Magnetic sensors are used to detect the presence of magnetic particles within the digestive system. These sensors can be used to diagnose conditions like gastrointestinal bleeding.
2.1.4. Smartphones
2.1.5. Others
2.2. Nonportable Sensing Technologies
- Stationary medical imaging technologies: Imaging technologies are noninvasive methods to visualize internal organs and diagnose various diseases [135]. Examples include X-ray, computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). Owing to the extensive literature available on medical imaging methods and their applications in detecting and diagnosing various diseases and abnormalities, we have not provided detailed features of each method. Instead, we have referenced key review articles, such as Hosny et al., which presented a comprehensive overview of imaging technologies that have been enhanced with artificial intelligence techniques to diagnose various diseases [136]. Guluma et al. also reviewed DL methods in the detection of cancers using medical imaging data [137]. Additionally, Rana et al. discussed the use of ML and DL as medical imaging analysis tools for disease detection and diagnosis [138]. These articles provide valuable insights into the types of medical imaging data and applications of advanced computational techniques in medical imaging, and demonstrate their potential in improving disease diagnosis and patient outcomes.
- Environmental sensing technologies: They are used to detect and monitor environmental factors that can impact health conditions. Examples include air quality sensors, temperature sensors, and humidity sensors [139]. These sensors are used in smart homes. By combining these sensors with other DH technologies, they can play significant roles in improving the quality of care, reducing healthcare costs, and enhancing the independence and well-being of individuals [140].
- Monitoring and diagnostic technologies: Monitoring and diagnostic technologies based on biosensors are used to monitor and diagnose health conditions [141]. These devices are used to measure various biomarkers, such as glucose, cholesterol, and other vital signs, such as ECG, EEG, electro-oculography (EOG), and electroretinography (ERG).
- Robotic surgery systems: They are advanced medical devices that utilize robotic arms and computer-controlled instruments to assist surgeons in performing minimally invasive surgeries [141,142,143]. Examples of common robotic surgery systems include: (1) the da Vinci Surgical System [141], which is comprised of a console for the surgeon, and several robotic arms that hold surgical instruments and a camera; (2) MAKOplasty [142], utilized for orthopedic surgeries, such as knee and hip replacements; (3) the CyberKnife [143], employed for radiation therapy to treat cancer; (4) the ROSA Surgical System, utilized for neurosurgery procedures.
3. Transfer Learning: Strategies and Categories
3.1. Why the Transfer Learning Technique
- Appropriate modeling algorithms: there are many different types of ML algorithms, and choosing the right modeling algorithm for a particular task requires careful consideration of the data, the problem, and the desired outcome.
- Hyperparameter tuning: each ML method has hyperparameters that must be set before training, such as the learning rate, regularization strength, number of layers, etc. Determining the optimal values for these hyperparameters can be time-consuming, as it often requires many attempts to attain the best configuration.
- Data quality and privacy: preparing data to train ML models often requires extensive preprocessing of the raw data to enhance its quality and size. This involves techniques like normalization, scaling, transformation, feature selection, data augmentation, and data denoising, which demand careful considerations of the underlying data and the specific problem.
- Significant hardware resources: DL algorithms particularly require significant computational resources, including powerful GPUs, high-speed storage, and large amounts of memory, to perform complex computations due to the deep architectures that consist of various types of numerous kernels and layers. Several challenges are associated with these requirements, such as cost, availability, scalability, energy consumption, maintenance, and upgrade requirements.
3.2. Categories and Techniques of Transfer Learning
3.3. What to Transfer?
- Instance transfer: The ideal solution in TL is to effectively reuse knowledge from one domain to enhance the performance in another domain. However, the direct reuse of data from the source domain in the target domain is typically not feasible. Instead, the focus is on specific data instances from the source domain that can be combined with target data to enhance the results. This process is known as inductive transfer. This approach assumes that particular data portions from the source domain can be repurposed through techniques like instance reweighting and importance sampling.
- Feature-representation transfer: The goal of this approach is to decrease the differences between domains and improve the accuracy by finding valuable feature representations that can be shared from the source to the target domains. The choice between supervised and unsupervised methods for feature-based transfers depends on whether labeled data are accessible or not.
- Parameter transfer: This approach operates under the assumption that models for related tasks have certain shared parameters or a common distribution of hyperparameters. Multitask learning, where both the source and target tasks are learned simultaneously, is used in parameter-based TL.
- Relational-knowledge transfer: In contrast to the above three methods, relational-knowledge transfer aims to address non-independent and identically distributed data (non-IID), where each subsample exhibits significant variation and does not accurately represent the overall dataset distribution.
4. Applications of Transfer Learning on Digital Health Sensing Technologies
4.1. Methods, Strategies, and Applications of Transfer Learning in Digital Healthcare
4.1.1. Feature Extraction
4.1.2. Fine-Tuning
- Partial Fine-Tuning (unfreezing some layers)
- 2.
- Fully Fine-Tuning (unfreezing entire extracted layers)
- 3.
- Progressive Fine-Tuning (partially unfreezing the layers and training them on a multistage)
- 4.
- Adaptive Fine-Tuning (differentiating the learning rates for layer groups)
4.1.3. Domain Adaptation
4.1.4. Multitask Learning
4.1.5. Zero-Shot, One-Shot, and Few-Shot Learning
4.1.6. Federated Learning
4.2. Advantages and Disadvantages of Transfer Learning
- Improved performance: TL can help improve the performance of ML models, especially in cases where the training data are limited.
- Reduced training time: TL can reduce the amount of time and resources required to train an ML model, as the pretrained model can provide a starting point for learning.
- Reduced need for large datasets: TL can help mitigate the need for large datasets, as the pretrained model can provide a starting point for learning on smaller datasets.
- Increased generalization: TL can help improve the generalization of ML models, as the pretrained model has already learned the general features that can be applied to new datasets.
- Maintain data privacy: Multiple centers can collaboratively develop a global model without the need to share data to protect data sharing privacy.
- Domain-specific knowledge [239,240]: TL requires domain-specific knowledge to be effective. For example, if the Ds is image data, while the Dt is sound data, it is obvious that their features and distributions are dissimilar. Without finding a way to connect these two different domains, TL cannot be feasible.
- Limited flexibility: If the source task and target task are different and not related, it may not be easy to adapt the source task to a new task.
- Risk of negative transfer: TL can lead to a negative transfer for various reasons: distinct domains, conflicting assumptions, incompatible features, unbalanced transfer (if the source domain dominates the target domain, the model might be overfit to the source domain’s characteristics, leading to poor generalization on the target task), and model complexity. Additionally, transferring knowledge from noisy and limited source data cannot lead to positive outcomes in the target data.
- Limited interpretability: TL can make it more challenging to interpret the features learned by the model, as they may be influenced by the source model and may not necessarily be relevant to the target domain.
5. Conclusions and Future Work
- Adaptive Learning for real-time DH sensing Data:
- 2.
- Enabling TL on Edge Devices (EDs) for timely healthcare applications:
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
Appendix A
Technology | Worn/Attached Location | Features and Applications |
---|---|---|
Smart watches and fitness trackers (Wearable) | Wrist, upper arm, waist, and ankle | Track physical activity, heart rate, sleep patterns, and other health metrics. |
Smart lenses (Wearable) | Head/eye | Embedded with sensors to monitor glucose levels and other parameters in the tears, and send the data to a connected device. |
Mouthguards (Wearable) | Head/mouth | Monitor various health metrics, such as the heart rate, breathing rate, and oxygen saturation, by measuring changes in the saliva and oral fluids. |
Continuous glucose monitoring and insulin pumps (Wearable/attached to the skin using adhesive patches) | Abdomen (belly), upper buttocks, upper arm, and thigh | Help people with diabetes manage their blood sugar levels by continuously monitoring glucose levels and automatically delivering insulin as needed. |
Headbands and hats (Wearable) | Head/around the forehead, and over the ears | Measure the brain activity, heart rate, and other vital signs. |
Chest straps and attached bands (Wearable) | Around the chest or the wrist | Measure the heart rate variability, respiratory rate, and other health metrics by sensing changes in the skin conductivity or other physiological parameters used in the field of fitness and wellness. |
ECG patches (Attached to the skin using a medical-grade adhesive) | Chest, upper back, or upper arm | It can monitor the heart rate, rhythm, and other cardiac metrics, and are often used to diagnose arrhythmias and other heart conditions. |
Blood pressure cuffs (Wearable) | Wrist or upper arm | Measure blood pressure and can help diagnose and manage hypertension and other cardiovascular conditions. Some of these devices contain memory to store measurements and send information wirelessly to healthcare providers. |
Smart clothing shirts, pants, and sports bras (Wearable) | Human body | Embedded with sensors to monitor vital signs, physical activity, and other health parameters. |
Wearable cameras | Capture images and video of a patient’s environment, which can be used for telemedicine and remote monitoring purposes. | |
Smart jewelry rings, bracelets, and necklaces (Wearable) | Different body locations | Equipped with sensors to track various health metrics. |
Smart shoes (Wearable) | Foot | Detect gait patterns, track steps, and monitor posture. |
Skin patches (Attachable) | Skin | Attached to the skin to monitor various physiological parameters, such as the heart rate, blood glucose levels, temperature, and hydration. |
Smart helmets (Wearable) | Head | Enhance safety and provide connectivity. Equipped with sensors to monitor head impact forces and detect signs of concussion in athletes. |
Sensor (Type of Data) | Features | Applications |
---|---|---|
Electrocardiogram (ECG) (Time series) | Measures electrical signals of the heart over time | Detecting arrhythmias and predicting heart disease [144,145] |
Blood glucose monitoring (Time series) | Measures glucose levels over time | Predicting blood glucose levels [146,147] |
Pulse oximeter (Time series) | Measures oxygen saturation and heart rate over time | Monitoring patients with respiratory (chronic obstructive pulmonary disease [148], COVID-19 [149], cardiac conditions [150]) |
Electroencephalogram (EEG) (Time series) | Measures electrical activity in the brain over time | Predicting epilepsy [151], seizure risk [152], and diagnosing neurological disorders [153,154] |
Accelerometer (Time series) | Measures movement over time | Monitoring physical activity [35,37,49] and predicting falls [155,156] |
Blood pressure monitor (MEMS) (Time series) | Measures blood pressure over time | Cardiovascular monitoring [157] |
X-ray (Image) | Images of internal structures, such as bones or organs | Diagnosing internal injuries or diseases (i.e., coronavirus [158,159], heart diseases [160]) |
MRI (Image) | Images of internal structures, such as the brain or joints | Diagnosing internal injuries or diseases (i.e., cardiovascular diseases [161], cancers [162,163], knee injuries [164]) |
CT scan (Image) | Images of internal structures, such as the brain or abdomen | Diagnosing internal injuries and diseases (i.e., cancers [165,166], cerebral aneurysm [167], lung diseases [168], and brain injuries [169]) |
Ultrasound (Image) | Images of internal structures, such as the fetus or organs | Diagnosing internal injuries or diseases (i.e., carpal tunnel [170], liver diseases [171,172], and kidney injuries [173]) |
Spirometer (Time series) | Measures lung function, including volume and flow rates | Predicting respiratory disease progression and monitoring the response to treatment [174,175] |
Photoplethysmography (PPG) (Time series) | Measures various physiological parameters (heart rate, blood oxygen saturation, blood pressure, glucose levels, and emotional state) | Predicting glucose levels in patients with diabetes [176,177] and monitoring the emotional state or stress levels [178,179] |
Electro-oculogram (EOG) (Time series) | Measures electrical signals from eye muscles and movements | Monitoring sleep patterns [180,181] and predicting eye disorder [182] |
Infrared thermometer (Time series) | Measures body temperature from a distance | Monitoring patients with fever or hypothermia [183,184] |
Optical coherence tomography (OCT) (Image) | Images of internal structures, such as the retina or cornea | Diagnosing eye diseases [185,186] |
Capsule endoscope (Video) | Images and videos of the digestive tract | Diagnosing gastrointestinal disorders [187,188] |
Acoustic (Video) | Measures acoustic features of the voice, e.g., the pitch, volume, and tone | Predicting Parkinson’s disease [189,190], diagnosing voice disorders [191], and detecting cardiac diseases [192] |
Electrodermal activity sensor (EDA) (Time series) | Measures the electrical activity of sweat glands | Predicting emotional or psychological states [193,194] and monitoring stress levels [195] |
Magnetometer (Time series) | Measures magnetic fields in the body | Monitoring cardiac function [196] and detecting locomotion and daily activities [197] |
Photoacoustic imaging (Image) | Combines optical and ultrasound imaging for high-resolution images | Diagnosing cancer [198,199] and brain diseases [200] |
Smart clothing (Time series) | Monitors vital signs and activity levels through sensors woven into clothing | Monitoring sleep [85], human motion [88], and detecting cardiovascular diseases [86]. |
Pulse oximeter (Time series) | Measures oxygen saturation in the blood through a sensor on a finger or earlobe | Monitoring patients with respiratory [201] or cardiac conditions [202] |
Multi-sensors (Multimodal signals data) (Time series) | Selects a few data features for better performance and higher accuracy | Multitask emotion recognition (valence, arousal, dominance, and liking) after watching videos [45] |
Multi-sensors (Multimodal imaging data) (Image) | Provides information about tissues and internal organs, and functional information about metapolicy activities | Early detections of COVID-19 to assign appropriate treatment plans [203] |
Appendix B
Task, Goal, and ML/DL Software to Develop the Model | Data Characteristics | Development Procedure | Achievements |
---|---|---|---|
Task: Automatically classify patients’ X-ray images into one of three categories: COVID-19, normal, and pneumonia. Goal: Overcome the difficulty in selecting the optimal engineering features to develop a reliable prediction model. Reduce the high dimensionality of the raw data, and improve its meaning. Software: Not specified. | Source: COVID-19 radiography database (open access provided by Kaggle). This database consists of 4 datasets:
|
|
|
Task, Goal, and ML/DL Software to Develop the Model | Data Characteristics | Development Procedure | Achievements |
---|---|---|---|
Task: Classify human activities based on smartphone sensor data. Goal: Use fine-tuning to speed up training processes, overcome overfitting, and achieve a high classification accuracy in a new target task. Software: Not specified. | Source: Two state-of-the-art datasets were used: the “Khulna University Human Activity Recognition (KU-HAR)” and “the University of California Irvine Human Activities and Postural Transitions (UCI-HAPT)” Data usage:
KU-HAR dataset (2021): Contains 20,750 samples of 18 different activities (stand, sit, talk–sit, talk–stand, stand–sit, lay, lay–stand, pick, jump, push-up, sit-up, walk, walk backwards, walk–circle, run, stair–up, stair–down, and table tennis). Each sample lasted 3 s. The data were collected using a smartphone’s accelerometer and gyroscope sensors, worn at the waist. The data were gathered from 90 people aged 18 to 34. The data were not cleaned or filtered in any way so to consider a realistic dataset of real-world conditions. The dataset is unbalanced, and no data samples overlap with each other. UCI-HAPT (2014): Contains 10,929 samples collected from 30 volunteers (aged 19–48) using a waist-mounted smartphone triaxial accelerometer and gyroscope at the sampling rate of 50 Hz. It contains 12 activities (walking, walking upstairs, walking downstairs, sitting, standing, laying, stand-to-sit, sit-to-stand, sit-to-lie, lie-to-sit, stand-to-lie, and lie-to-stand). |
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Task, Goal, and ML/DL Software to Develop the Model | Data Characteristics | Development Procedure | Achievements |
---|---|---|---|
Task: Automatically classify patients’ MRI scans into one of three brain tumors: meningioma, glioma, and pituitary tumors, and segment the tumor regions from the MRI scans. Goal: Reduce development processes and improve the performance by jointly training two distinct but related tasks. Software: Not specified. | Source: Figshare MRI dataset. This dataset consists of: 3064 2D T1-weighted contrast-enhanced modalities (coronal, axial, and sagittal) collected from 233 patients. The classification and segmentation labels are included. Datadistribution:
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Sensor | Function | Application |
---|---|---|
Accelerometer | Measures the phone’s movement and orientation |
|
GPS | Provides location information |
|
Gyroscope | Measures the phone’s rotation to detect changes in position |
|
Photoplethysmography (PPG) | Measures the heart rate |
|
Photodiode sensor (ambient light sensor) | Measures the amount of light in the user’s environment |
|
Infrared (IR) sensor (proximity sensor) | Detects the presence of nearby objects or surfaces, as well as the contactless monitoring of vital signs |
|
Transfer Learning Method | Feature Extraction | Fine-Tuning | Domain Adaptation |
---|---|---|---|
Source and Target Domains | Similar | Similar or related | Related but not different |
Source and target tasks | Similar/related/different | Similar or related | Similar or related |
Model complexity | Low/moderate | Moderate/high | High |
Features |
|
|
|
Challenges |
|
|
|
Transfer Learning Method | Multitask | Federated | Few-/One-/Zero-Shot |
---|---|---|---|
Source and Target Domains | Similar | Multiple distributed Similar | Similar/related/different |
Source and target tasks | Multiple and related | Similar | Similar or related |
Model complexity | High | High | High |
Features |
|
|
|
Challenges |
|
|
|
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Chato, L.; Regentova, E. Survey of Transfer Learning Approaches in the Machine Learning of Digital Health Sensing Data. J. Pers. Med. 2023, 13, 1703. https://doi.org/10.3390/jpm13121703
Chato L, Regentova E. Survey of Transfer Learning Approaches in the Machine Learning of Digital Health Sensing Data. Journal of Personalized Medicine. 2023; 13(12):1703. https://doi.org/10.3390/jpm13121703
Chicago/Turabian StyleChato, Lina, and Emma Regentova. 2023. "Survey of Transfer Learning Approaches in the Machine Learning of Digital Health Sensing Data" Journal of Personalized Medicine 13, no. 12: 1703. https://doi.org/10.3390/jpm13121703
APA StyleChato, L., & Regentova, E. (2023). Survey of Transfer Learning Approaches in the Machine Learning of Digital Health Sensing Data. Journal of Personalized Medicine, 13(12), 1703. https://doi.org/10.3390/jpm13121703