1. Introduction
Bacteria that invade tissues are sensed, ingested, and killed by professional phagocytes, including macrophages and neutrophils [
1,
2]. Bacteria are recognized as a foreign body by the scavenger receptor in macrophages and endocytosed in the endosomes formed by invaginating the cell membrane, namely, phagosomes [
2]. NADPH oxidase on the membrane generates radical oxygen species in the phagosome. The phagosome fuses with the lysosome, forming a phagolysosome, and under acidic conditions, hydrogen peroxide and hydroxyl radicals are also produced to kill the bacteria. The phagolysosomes possess acid phosphatase and proteases, which participate in digesting the bacteria [
3]. The host cells also utilize an autophagy system that eliminates surviving intracellular bacteria [
4]. Most endocytosed bacteria can be eradicated by these systems that macrophages are equipped with. However, some bacteria escape from the phagolysosomes and survive inside the cells, resulting in the presence of an intracellular parasite. The various survival strategies are described as follows: (1) inhibition of phagocytosis for
Yersinia [
5]; (2) distortion of the phagosome membrane and escaping into the cytoplasm for
Listeria [
6]; (3) inhibition of the phagosome and lysosome fusion by
Salmonella and
Mycobacterium tuberculosis [
7]; (4) autophagy inhibition [
8,
9], as another intracellular elimination mechanism; (5) phagocytic ROS subversion [
10]; and (6) inhibition of macrophage apoptosis [
11].
Staphylococcus aureus is a commonly found inhabitant on the skin and in the intestine and nasal cavity and can also induce epidermal infections, food intoxications, and pneumonitis [
12]. Among antimicrobial-resistant bacteria, methicillin-resistant
S. aureus (MRSA) is a major type of bacteria found in patients and often acquires multi-drug resistance [
13]. MRSA is also found in ulcerated wounds and on foreign materials, including catheters, and frequently forms biofilms [
14]. A biofilm, which is a surviving community of bacteria, consists of water, extracellular polysaccharides, and bacteria [
15] and becomes resistant to inflammatory cell attacks and antibacterial drug penetration, as well as undergoes phenotypic alteration for persistent drug tolerance. Therefore, biofilm eradication is quite important [
16,
17,
18].
In our previous study, when MRSA strains with different biofilm-forming abilities were intravenously injected in mice as a model for bacteremia [
19]; the strains with a greater tendency to form biofilms, including OJ-1, induced severe virulence as compared to those with a lower biofilm-forming ability. Bacteria massively accumulated in the liver 24 h after injection and colocalized the hepatic sinusoid, especially inside Kupffer cells. Moreover, the strains with higher biofilm-forming abilities survived better in the tissue. The results suggest that MRSA, which enters the bloodstream, is immediately removed by macrophages using phagocytosis. However, the intracellular persistence of
S. aureus was previously reported [
20,
21,
22]. If bacteria utilize such an intracellular survival strategy during infections, it is crucial to delineate the mechanisms of intracellular survival not only for patients with bacteremia but also for patients with wound infections.
In the present investigation, in vitro experiments were performed for ten days after ingesting bacteria using a biofilm-forming MRSA strain, OJ-1 [
16], and macrophage cell line, J774A, to clarify intracellular survival of MRSA in macrophages incubated under an overdose of vancomycin (VCM).
2. Materials and Methods
2.1. Macrophage Culture
J774A, a mouse macrophage cell line, was purchased from American Type Culture Collection (Manassas, VA, USA) and cultured in Dulbecco’s modified Eagle’s medium–low glucose (DMEM) (Merck/Sigma-Aldrich, Tokyo, Japan) with 10% fetal bovine serum (FBS) (Nichirei BioSciences Inc., Tokyo, Japan) at 37 °C in 5% CO
2. After discarding the medium from the J774A culture in a T75-flask (Greiner Bio-One GmbH, Kremsmünster, Austria), cells were washed with 10 mL of Hank’s balanced salt solution (HBSS) (Thermo Fisher Scientific, Waltham, MA, USA) and collected using a cell scraper (AGC Techno-Glass K.K., Shizuoka, Japan). Cell numbers were counted with a hemocytometer (ERUMA K.K., Tokyo, Japan), and viability was detected by trypan blue solution (Sigma-Aldrich Co. Ltd., Tokyo, Japan). Living cells at the density of 4 × 10
4 cells/0.5 mL were obtained, and 0.5 mL of it was planted to the well of a 24 well-plate (Greiner Bio-One GmbH), and overnight-incubated cells were used. After the incubation, cells attached to the wells were washed with HBSS to which study media based on the FBS containing DMEM in the presence/absence of 48 μg/mL of vancomycin (VCM) (Merck KGaA, Darmstadt, Germany) was added (about 30 times higher concentration of the MIC and MBC) [
16]. After the end of the study, the media were aspirated, and adhered cells were washed three times with HBSS, and the cells were scraped off using a top cut Dispo-loop (AS ONE Co., Osaka, Japan). The numbers of living and dead cell were assessed using a hemocytometer.
2.2. Methicillin-Resistant S. Aureus Culture
A clinical MRSA strain OJ-1 (ATCC BAA-2856) with high biofilm-forming ability that was established by us was used. OJ-1 were cultured on tryptic soy agar (TSA) (Becton Dickinson and Company, Andover, MA, USA) and in tryptic soy broth (TSB) (Becton Dickinson and Company) at 37 °C. One colony of OJ-1 on TSA was dispersed in 5 mL TSB and cultured overnight at 37 °C. Planktonic bacteria excluding the attached ones in biofilms were collected and centrifuged at 3000 rpm. OJ-1 was resuspended in 5 mL of 10% FBS containing DMEM without phenol red, and 1000-times diluted OJ-1 was grown to OD = 0.57 (λ = 578 nm). The bacterial culture solution in the presence/absence of 48 μg/mL of VCM was added to the wells of a 24-well plate and incubated at 37 °C in 5% CO2. At various times after incubation (0, 3, 6, 10, 24, and 48 h), bacterial solutions were collected and sonicated (Ieda Boueki K.K., Tokyo, Japan) for 30 s. The turbidity of the bacterial solution was measured at 578 nm wavelength using an absorption spectrometer. The bacterial solution was serially diluted, spread on TSA, and incubated at 37 °C. After overnight incubation, colony forming units (CFUs) were assessed.
2.3. Coculture Condition
Ten-times diluted overnight-cultured OJ-1 was used (about 2 × 107 CFU/mL). Exposure times were initially determined by adding the OJ-1 to the J774A culture and incubating for 1, 2, and 3 h at 37 °C. No cells survived the 3 h incubation, while cellular toxicity was minimal after 1 h of incubation. Based on these results, one hour of incubation was used for the experiments. Dead OJ-1 was also used after being exposed to 70% ethanol for 1 h and then washed twice with DMEM.
J774A cells were seeded on a 1 cm round cover slip (MATUNAMI KOGYO K.K., Osaka, Japan) that was placed inside of the well of a 24-well plate. After overnight incubation, 50 μL of OJ-1 at overnight growing density in HBSS was added to the well, which was filled with 500 μL growth media. After one hour of coculture at 37 °C, the cells were washed three times with HBSS and cultured with growth media with/without VCM.
2.4. Study Groups
The study group comprised four groups; the normal control (NC) group: J774A culture without OJ-1 and VCM; VC group: J774A culture plus 48 μg/mL VCM; DV group: J774A culture pre-exposed to dead OJ-1 plus 48 μg/mL VCM, and AV group: J774A culture pre-exposed with living OJ-1 plus 48 μg/mL VCM. The cultures were incubated for 10 days at 37 °C in 5% CO2 and the medium was changed every 3 days. After completion of the study, cells were collected, and their cellular viability and number were assessed using a trypan blue excision assay. Then, the cells were centrifuged for 10 min at 3000 rpm, and 1 mL distilled water was added to the cells for cell membrane distortion. The solution was then sonicated and used for CFU assay. In some studies, the medium with VCM in the AV group was changed to the medium without VCM after 10 days of incubation, by which intracellular survival of OJ-1 was assessed.
2.5. Morphometrical Measurement of Cells and Bacteria
To examine the morphological alteration, J774A cells were seeded on a 1 cm round coverslip (MATUNAMI KOGYO K.K., Osaka, Japan) that was placed inside of the well of a 24-well plate. After completion of the study, cells on the slip were fixed in 5% buffered formalin. Cells and bacteria were stained with toluidine blue and Gram stain, respectively. The morphological observation was performed with a microscope (BIO-ZERO, KEYENCE Co., Osaka, Japan). Morphological cell viability/cytotoxicity of J774A cells was examined using the LIVE/DEAD assay (Thermo Fisher Scientific, Tokyo, Japan).
Cell surface area: Toluidine-blue-stained cells on the cover slips were photographed at 40-times magnification, and cell surface area was morphometrically measured using the VH analyzer (VH-H1A5, KEYENCE Co.). More than 100 cells in a sample were analyzed.
Intracellular bacterial area: Bacteria stained by the Gram stain in the cells on the slip were photographed at 40-times magnification. In the photographs, the total cellular area and the area of intracellular bacteria, which excluded bacteria in intercellular distribution, were measured by the VH analyzer. Three different portions were utilized for calculating the mean area of each experimental time point.
2.6. Intracellular Detection of Bacteria and Lysosomes
After completion of the study, cells on coverslip in a 24-well plate were washed three times with HBSS and were incubated in 500 μL of 50 nM LysoTracker Red DND-99 (Thermo Fisher Scientific) in DMEM at 37 °C for 1 h. Then, cells on the coverslip were transferred to a new 24-well plate and incubated in DMEM with 2% Tween 20 (Sigma-Aldrich Japan) and 0.15% SYTO-9 (Thermo Fisher Scientific) for 15 min at room temperature in the dark. After the incubation, cells on the coverslip were embedded on a glass slide with PERMAFLUOR (Thermo Fisher Scientific) and observed under a microscope (BIO-ZERO) with 20× objective lens: 1/300 s for the phase-contrast image, 1 s for the green fluorescence image, and 2 s for the red fluorescence image. The images were overlaid using software (BZ-H1A ver. 3.6 KEYENCE Co.). More than five pictures in different areas were randomly taken, in which it was determined whether or not each cell had SYTO-9-positive bacteria and/or LysoTracker-positive lysosomes.
Intracellular localization of lysosomal proteins and autophagosomes were immunohistochemically detected using specific rabbit antibodies LAMP-1 (Bioss Antibodies, Woburn, MS, USA) and LC3B (D11) (#3868) (Cell Signaling Technology Inc., Danvers, MA, USA), respectively. Alexa Fluor 568-conjugated goat anti-rabbit IgG was used as a secondary antibody. To detect OJ-1, a FITC-conjugated antibody to S. aureus was used (VitroStat, Portland, ME, USA).
Immunohistochemical evaluation and limitation: We immunohistochemically evaluated each component, such as activated lysosomes by LysoTracker, lysosomes by LAMP-1, and autophagosomes by LC3B. Intracellular OJ-1 was detected using SYTO-9 and S. aureus antibodies. Fluorescence intensity in captured images was used as a measure of the expression of targeted components. Therefore, the components detected in the assays were relative expressions rather than absolute expressions.
2.7. Electron Microscopy
After completion of the study on days 1, 3, and 10, cultured cells were collected and fixed in 2% glutaraldehyde in 0.1 M phosphate-buffered saline (PBS) (pH 7.4) and postfixed with 5% OsO4 in 0.1 M PBS and dehydrated with acetone and embedded in Epon resin. After obtaining an ultrathin section (70 nm), the section was stained on a grid-mesh with uranyl acetate and lead nitrate and then carbon-coated and observed under a transmission electron microscope (100CX, JEOL Ltd., Tokyo, Japan).
2.8. Data and Statistical Analysis
Similar experiments were performed more than twice, and all data included more than triplicated samples. Results from two different experimental groups initially underwent a distribution analysis using the F-test, before the Student’s t-test or Mann–Whitney U test were performed. p values <0.05 were considered to denote statistical significance.
4. Discussion
It was previously reported that
S. aureus can survive intracellularly after being phagocytosed by macrophages [
20,
21,
22]. However, the mechanism of intracellular bacterial survival is still not fully understood. In this study, we used a biofilm-forming MRSA clinical strain OJ-1 and a macrophage cell line J774A to investigate intracellular survival of OJ-1 incubated with overdosed vancomycin. We initially compared the doubling time of J774A cells and OJ-1, which were about 17 h and 40 min, respectively. If OJ-1 proliferates intracellularly at such a rate, then the host cells could be killed immediately. On the other hand, the proliferation activity of J774A was decreased in the VC group. One mechanism of intracellular bacterial survival may be the growth suppression of host cells. It is shown that
S. aureus is phagocytosed by human monocyte-derived macrophages and grows without inducing cell death [
23]. In such host cells, long-term
S. aureus infection decreases SUMOylation in macrophages, which supports their intramacrophage survival [
24]. Thus, growth arrest in the intracellular bacteria [
21] without inducing apoptosis of the host cells [
11] may be a strategy for their survival.
Macrophages phagocytose planktonic bacteria via several receptors, including scavenger receptors [
25]. Pro-inflammatory responses and bacterial killing responses against
S. aureus are activated by the toll-like receptor–mediated intracellular NF-κB-signaling [
26]. In the present study, J774A as a host cell revealed severe cellular alterations after ingesting OJ-1, which include intracellular bacterial accumulation, a decrease in cell growth, the appearance of multinucleated giant cells, and lysosome activation. During the 10 days of study, the initial cellular responses appeared to be at their peak around day 3 to day 5.
In the J774A cell size alteration shown in
Figure 2C, dead bacteria in the DV group may be immediately scavenged as a foreign body after co-incubation, resulting in a significant cellular enlargement on day 0. However, this did not occur in the AV group on day 0, and wide dispersion in the cell area took place on day 3. At that time, multi-nucleated giant cells transiently appeared. Foreign-body giant cells that arise by cell fusion are known to form in cases when the foreign material’s size is more than 10 μm [
27]; however, the OJ-1’s size is only about 1 μm [
18]. Therefore, the foreign-body giant cells may not arise due to the ingestion of oversize materials. The total cell number in the AV group consequently decreased after days 2 and 3.
We also analyzed the lysosome expression process in J774A cells. In the control VC group, lysosome expression slightly increased during the incubation time. This detected increase can be a result of macrophage response to the cell debris produced in the over-confluent cultures in a 24-well plate. Thus, such lysosomal activation visualized by LysoTracker might be a natural cellular reaction when cultured in a narrow well. On the other hand, in the AV group, LysoTracker-positive cell numbers drastically increased during days 3 and 5 of the study. Such increased lysosome expression can be a response to the phagocytosed OJ-1. The cell state during the initial 5 days of the study could be for an intracellular processing phase for the phagocytosed OJ-1, in which they may work for eradication of the ingested bacteria in the cells. This decrease was also noted in the study using LAMP-1-positive lysosomes. As a result of the robust bacterial eradication process, the intracellular morphometrical bacterial number and living bacteria number shown by CFU drastically decreased after day 7 of the study, and the cells entered a stable state on days 7 and 10. Intracellular OJ-1 out of the LAMP-1-positive lysosomes increased over time. Moreover, our results showed that intracellular OJ-1 could escape from the LC3-positive autophagy elimination mechanism on day 10 in the AV group. Geng et al. (2020) have recently reported that
S. aureus could escape autophagic degradation by inhibiting autophagy flux in epithelial cells [
9]. It is, thus, possible that cytoplasmic OJ-1 may also escape from the autophagy as another elimination mechanism.
In a human body, monocytes/macrophages in the peripheral tissues hardly multiply unless in tumorigenic transformation. However, J774A cells were actively grown in culture. Therefore, bacteria in host cells may decline in number with the intracellular degradation by the lysosomes and/or the cytoplasmic division by host cell replication. After numerous accumulations of intercellular OJ-1 during the initial 5 days of incubation, the number of living bacteria drastically decreased due to lysosome eradication activities. Therefore, the number of cells with lysosome expression decreased after day 7 of the study. Interestingly, changes in the cells in LysoT(+)/OJ-1(+) and LysoT(−)/OJ-1(+) showed symmetric variation. The two types of cells appeared conversely in the early and late phases. In the late phase, the number of J774A cells with activated lysosomes against OJ-1 gradually decreased, which was accompanied by an increase in the number of J774A cells with OJ-1 without lysosome expression. It seems likely that J774A cells could cease the lysosomal activation even in the presence of OJ-1 in the cells unless experiencing harmful effects from intracellular OJ-1. The intracellular morphology of J774A cells was examined using an electron microscope. In an early phase, prior to day 5 of study, the intracellular bacterial clusters, which were localized within the lysosome structure, were predominantly found. However, on day 10, some bacteria escaped lysosomes and localized in the cytoplasm. It has been shown that the phagolysosome membrane can be disrupted by the effects of β-toxin and δ-toxin produced by trapped
S. aureus, resulting in the intracellular survival of
S. aureus in the cytosol [
28]. OJ-1 on day 10 may escape attack from the lysosomes and survive in the cells. Furthermore, the CFU on days 7 and 10 were at a similar level.
It is reported that biopsy specimens from symptom-free patients, who had experienced recurrent rhinosinusitis during the three years after
S. aureus infection, possessed histologically infected foci of intracellular bacteria in the non-professional phagocytes, including the nasal epithelium, glandular, and myofibroblastic cells. Pulsed-field gel electrophoresis analysis showed identical bacteria to the previous ones in the same patients [
29]. Most pathogenic bacteria in our body survive only in the extracellular milieu, and invading bacteria in the tissues are phagocytosed and killed by the professional phagocytes, including macrophages and Kupffer cells [
19]. However, some bacteria, such as tubercle bacillus and
Bacillus typhosus, can survive intracellularly in macrophages as a parasite. The mechanisms of the intracellular survival of phagocytosed bacteria are by inhibiting the fusion of the phagosomes and lysosomes [
7], escaping from the phagolysosomes to the cytoplasm [
6], or escaping from the autophagosomes [
9], resulting in prolonged intracellular survival.
Removal of VCM from the J774A cell culture on day 10 led to rapid growth of intracellular bacteria and, as a result, to the death of J774A cells. The results suggest that in patients with MRSA wound infection, which could be treated with debridement and antibacterial drugs, bacteria phagocytosed by macrophages in wounds may survive even after antibacterial therapy.