Reliability of a White Striping Scoring System and Description of White Striping Prevalence in Purebred Turkey Lines
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Animals
2.2. Scoring System
2.3. Scoring Evaluation
2.4. Reliability Analysis
2.5. White Striping Prevalence and Association with Production Traits
3. Results
3.1. Intra-Observer Reliability
3.2. Inter-Observer Reliability
3.3. Prevalence of White Striping
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Observer 1 | Observer 2 | Observer 3 | Observer 4 | Observer 5 | Observer 6 | Average | |
---|---|---|---|---|---|---|---|
Session 1 (round 1 and 2) 1 | |||||||
Exact agreement (%) | 38 | 74 | 68 | 78 | 62 | 74 | 66 |
Spearman correlation | 0.48 ** | 0.68 *** | 0.69 *** | 0.79 *** | 0.63 *** | 0.81 *** | 0.68 |
Kappa | 0.12 (–0.05–0.29) | 0.51 (0.28–0.73) | 0.43 (0.21–0.65) | 0.64 (0.45–0.82) | 0.41 (0.21–0.61) | 0.62 (0.44–0.80) | 0.45 |
Linear weighted kappa | 0.20 (0.06–0.34) | 0.58 (0.37–0.78) | 0.54 (0.35–0.73) | 0.70 (0.54–0.86) | 0.51 (0.33–0.69) | 0.72 (0.58–0.86) | 0.54 |
Quadratic weighted kappa | 0.31 (0.17–0.46) | 0.68 (0.50–0.86) | 0.68 (0.53–0.83) | 0.78 (0.66–0.91) | 0.62 (0.45–0.80) | 0.82 (0.72–0.92) | 0.65 |
Session 2 (round 3 and 4) 1 | |||||||
Exact agreement (%) | 80 | 86 | 88 | 74 | 68 | 72 | 78 |
Spearman correlation | 0.73 *** | 0.87 *** | 0.86 *** | 0.67 *** | 0.70 *** | 0.74 *** | 0.76 |
Kappa | 0.62 (0.41–0.83) | 0.77 (0.61–0.93) | 0.80 (0.64–0.95) | 0.53 (0.31–0.75) | 0.47 (0.27–0.68) | 0.56 (0.36–0.76) | 0.63 |
Linear weighted kappa | 0.66 (0.46–0.85) | 0.82 (0.68–0.95) | 0.83 (0.70–0.96) | 0.59 (0.39–0.79) | 0.57 (0.40–0.75) | 0.65 (0.49–0.82) | 0.69 |
Quadratic weighted kappa | 0.71 (0.50–0.91) | 0.87 (0.77–0.97) | 0.88 (0.78–0.98) | 0.67 (0.49–0.84) | 0.70 (0.56–0.83) | 0.76 (0.63–0.89) | 0.76 |
Session 3 (round 5 and 6) 2 | |||||||
Exact agreement (%) | 80 | 86 | 88 | 76 | 80 | 76 | 81 |
Spearman correlation | 0.65 *** | 0.88 *** | 0.86 *** | 0.65 *** | 0.81 *** | 0.71 *** | 0.76 |
Kappa | 0.59 (0.37–0.81) | 0.80 (0.66–0.94) | 0.80 (0.65–0.95) | 0.52 (0.29–0.76) | 0.69 (0.51–0.86) | 0.58 (0.38–0.78) | 0.66 |
Linear weighted kappa | 0.62 (0.41–0.83) | 0.84 (0.72–0.96) | 0.83 (0.69–0.96) | 0.57 (0.36–0.79) | 0.75 (0.61–0.90) | 0.63 (0.46–0.81) | 0.71 |
Quadratic weighted kappa | 0.67 (0.47–0.88) | 0.88 (0.77–0.99) | 0.87 (0.76–0.97) | 0.64 (0.45–0.83) | 0.83 (0.72–0.94) | 0.71 (0.55–0.86) | 0.77 |
Session 1 1 | Session 2 1 | Session 3 2 | ||||
---|---|---|---|---|---|---|
Round 1 | Round 2 | Round 3 | Round 4 | Round 5 | Round 6 | |
Percentage agreement (%) 3 | ||||||
All 6 observers agree | 0 | 6 | 32 | 22 | 12 | 10 |
5 observers agree | 24 | 24 | 28 | 36 | 32 | 28 |
4 observers agree | 24 | 46 | 36 | 26 | 26 | 40 |
3 observers agree | 48 | 24 | 4 | 16 | 26 | 22 |
2 observers agree | 4 | 0 | 0 | 0 | 4 | 0 |
Exact agreement | ||||||
Kappa | 0.17 (0.10−0.25) | 0.27 (0.20–0.34) | 0.33 (0.26–0.39) | 0.29 (0.22–0.36) | 0.21 (0.15–0.28) | 0.24 (0.16–0.31) |
Kendall’s W | 0.61 *** | 0.68 *** | 0.74 *** | 0.70 *** | 0.61 *** | 0.66 *** |
Linear weighting | ||||||
Linear weighted kappa | 0.32 (0.20–0.44) | 0.45 (0.36–0.54) | 0.52 (0.45–0.59) | 0.48 (0.39–0.56) | 0.38 (0.28–0.47) | 0.41 (0.31–0.51) |
Gwet’s AC2 | ||||||
Overall | 0.54 (0.28–0.81) | 0.65 (0.56–0.74) | 0.79 (0.69–0.89) | 0.76 (0.66–0.87) | 0.67 (0.58–0.77) | 0.68 (0.58–0.79) |
Score 0 | 0.88 (0.80–0.96) | 0.86 (0.77–0.94) | 0.93 (0.88–0.99) | 0.96 (0.91–1.00) | 0.88 (0.78–0.97) | 0.89 (0.80–0.97) |
Score 1 | 0.47 (0.28–0.66) | 0.51 (0.32–0.70) | 0.72 (0.59–0.84) | 0.70 (0.51–0.89) | 0.57 (0.41–0.72) | 0.60 (0.43–0.78) |
Score 2 | 0.49 (0.26–0.72) | 0.58 (0.45–0.72) | 0.68 (0.53–0.84) | 0.61 (0.46–0.77) | 0.58 (0.44–0.73) | 0.56 (0.38–0.73) |
Score 3 | 0.81 (0.58–1.00) | 0.92 (0.86–0.98) | 0.93 (0.87–0.99) | 0.89 (0.81–0.96) | 0.91 (0.84–0.98) | 0.89 (0.81–0.97) |
Quadratic weighting | ||||||
Quadratic weighted kappa | 0.32 (0.20–0.44) | 0.45 (0.36–0.54) | 0.52 (0.45−0.59) | 0.48 (0.39–0.56) | 0.38 (0.28–0.47) | 0.41 (0.31–0.51) |
Gwet’s AC2 | ||||||
Overall | 0.74 (0.53–0.95) | 0.83 (0.77–0.88) | 0.91 (0.85–0.96) | 0.89 (0.83–0.95) | 0.83 (0.76–0.90) | 0.85 (0.78–0.92) |
Score 0 | 0.88 (0.80–0.96) | 0.86 (0.77–0.95) | 0.93 (0.88–0.99) | 0.96 (0.91–1.00) | 0.88 (0.78–0.97) | 0.89 (0.80–0.97) |
Score 1 | 0.47 (0.28–0.66) | 0.51 (0.32–0.70) | 0.72 (0.59–0.84) | 0.70 (0.51–0.89) | 0.57 (0.42–0.72) | 0.60 (0.43–0.78) |
Score 2 | 0.49 (0.26–0.72) | 0.58 (0.45–0.72) | 0.68 (0.53–0.84) | 0.61 (0.46–0.77) | 0.58 (0.44–0.73) | 0.56 (0.38–0.73) |
Score 3 | 0.81 (0.58–1.00) | 0.92 (0.86–0.98) | 0.93 (0.87–0.99) | 0.89 (0.81–0.96) | 0.91 (0.84–0.98) | 0.89 (0.81–0.97) |
Genetic Line | White Striping Score (0–3) | Slaughter Weight (kg) | Breast Weight (kg) | BMY (% BW) | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
N | Mean | SD | N | Mean | SD | N | Mean | SD | N | Mean | SD | |
A | 2839 | 2.57 | 0.776 | 2834 | 21.98 | 1.548 | 2830 | 5.23 | 0.583 | 2827 | 23.81 | 1.966 |
B | 3728 | 2.61 | 0.81 | 3715 | 19.11 | 1.286 | 3677 | 4.74 | 0.499 | 3666 | 24.81 | 1.789 |
C | 2034 | 2.47 | 0.782 | 2032 | 14.77 | 1.005 | 2031 | 3.77 | 0.394 | 2028 | 25.51 | 1.704 |
D | 3720 | 2.30 | 0.771 | 3701 | 24.87 | 1.801 | 3652 | 6.10 | 0.757 | 3647 | 24.47 | 2.108 |
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Vanderhout, R.J.; Leishman, E.M.; Hiscock, H.; Abdalla, E.A.; Makanjuola, B.O.; Mohr, J.; Harlander-Matauschek, A.; Barbut, S.; Wood, B.J.; Baes, C.F.; et al. Reliability of a White Striping Scoring System and Description of White Striping Prevalence in Purebred Turkey Lines. Animals 2022, 12, 254. https://doi.org/10.3390/ani12030254
Vanderhout RJ, Leishman EM, Hiscock H, Abdalla EA, Makanjuola BO, Mohr J, Harlander-Matauschek A, Barbut S, Wood BJ, Baes CF, et al. Reliability of a White Striping Scoring System and Description of White Striping Prevalence in Purebred Turkey Lines. Animals. 2022; 12(3):254. https://doi.org/10.3390/ani12030254
Chicago/Turabian StyleVanderhout, Ryley J., Emily M. Leishman, Heather Hiscock, Emhimad A. Abdalla, Bayode O. Makanjuola, Jeff Mohr, Alexandra Harlander-Matauschek, Shai Barbut, Benjamin J. Wood, Christine F. Baes, and et al. 2022. "Reliability of a White Striping Scoring System and Description of White Striping Prevalence in Purebred Turkey Lines" Animals 12, no. 3: 254. https://doi.org/10.3390/ani12030254
APA StyleVanderhout, R. J., Leishman, E. M., Hiscock, H., Abdalla, E. A., Makanjuola, B. O., Mohr, J., Harlander-Matauschek, A., Barbut, S., Wood, B. J., Baes, C. F., & van Staaveren, N. (2022). Reliability of a White Striping Scoring System and Description of White Striping Prevalence in Purebred Turkey Lines. Animals, 12(3), 254. https://doi.org/10.3390/ani12030254