Mycobacterium avium subsp. paratuberculosis in Sheep and Goats in Austria: Seroprevalence, Risk Factors and Detection from Boot Swab Samples
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Design, Animal Sampling and Data Collection
2.1.1. Serological Screening
2.1.2. Herd-Level Examination in Selected Dairy Goat Herds
2.2. Serological Analyses
2.3. qPCR of Individual Faecal Samples
2.4. Culture and qPCR of Boot Swab and Pooled Faecal Samples
2.5. Statistical Analyses
3. Results
3.1. Serological Screening
Animals (n) | Seropositive Animals (n) | Animal-Level Apparent Seroprevalence (%) | Animal-Level Calculated True Seroprevalence (%) | Herds (n) | Seropositive Herds (n) | Herd-Level Apparent Seroprevalence (%) | |
---|---|---|---|---|---|---|---|
Goat | 6434 | 126 | 2.0 (95% CI = 1.6–2.3) | 3.5 (95% CI = 3.1–4.0) | 638 | 71 | 11.1 (95% CI = 8.9–13.8) |
Sheep | 15,585 | 110 | 0.7 (95% CI = 0.6–0.9) | 1.2 (95% CI = 1.0–1.4) | 1032 | 92 | 8.9 (95% CI = 7.3–10.8) |
Total | 22,019 | 236 | 1.1 (95% CI = 0.9–1.2) | 1.9 (95% CI = 1.7–2.1) | 1670 | 163 | 9.8 (95% CI = 8.4–11.3) |
Goat Herds | Sheep Flocks | ||||
---|---|---|---|---|---|
Variable a | Apparent seroprevalence in %, absolute numbers in brackets b | p-value | Apparent seroprevalence in %, absolute numbers in brackets | p-value | |
Animal trading c | Yes No | 16.8 (25/149) 9.4 (46/489) | 0.012 * | 11.8 (48/406) 7.1 (44/616) | 0.011 * |
Dairy herd | Yes No | 18.6 (32/172) 8.4 (39/466) | <0.001 * | 6.1 (4/66) 9.2 (88/956) | 0.388 |
Grazing on common pastures | Yes No | 10.5 (9/86) 11.2 (62/552) | 0.833 | 10.6 (32/302) 8.3 (60/720) | 0.249 |
Grazing on alpine pastures | Yes No | 9.9 (11/111) 11.4 (60/527) | 0.653 | 10.7 (34/319) 8.3 (58/703) | 0.213 |
Animal Health Service membership | Yes No | 18.9 (25/132) 9.1 (46/506) | 0.001 * | 8.9 (24/270) 9.0 (68/752) | 0.940 |
Organic farming | Yes No | 13.6 (23/169) 10.2 (48/469) | 0.232 | 8.0 (22/274) 9.4 (70/748) | 0.511 |
Cohabitation with other animal species | |||||
Cattle | Yes No | 8.7 (23/265) 12.9 (48/373) | 0.097 | 11.8 (34/287) 7.9 (58/735) | 0.047 * |
Goat | Yes No | - | - | 13.0 (40/308) 7.3 (52/714) | 0.003 * |
Sheep | Yes No | 10.1 (28/278) 11.9 (43/360) | 0.456 | - | - |
Farmed game | Yes No | 33.3 (7/21) 10.4 (64/617) | 0.001 * | 0.0 (0/10) 9.1 (92/1012) | 0.318 |
South American camelids | Yes No | 20.8 (5/24) 10.7 (66/614) | 0.123 | 10.0 (2/20) 9.0 (90/1002) | 0.875 |
3.2. Herd-Level Examination
Herd Number | Herd Size (n) | Serum Sample Size (n) | Faecal Sample Size (n) | ELISA Positive a | PCR Positive a | Both ELISA and PCR Positive a | Boot Swab Samples (HEYM) d | Pooled Faecal Samples (HEYM) d |
---|---|---|---|---|---|---|---|---|
1 | 114 | 114 | 112 c | 20.2 (23) | 10.7 (12) | 8.9 (10) | 3/3 | 1/3 |
2 | 126 | 126 b | 122 c | 24.0 (30) | 10.7 (13) | 10.7 (13) | 4/4 | 1/3 |
3 | 57 | 57 | 57 | 22.8 (13) | 10.5 (6) | 8.8 (5) | 3/3 | 2/3 |
4 | 600 | 75 | 73 c | 28.0 (21) | 24.7 (18) | 23.3 (17) | 2/3 | 2/3 |
5 | 550 | 60 | 60 | 11.7 (7) | 5.0 (3) | 1.7 (1) | 3/3 | 1/3 |
Total | 432 | 424 | 21.8 (94) | 12.3 (52) | 10.9 (46) | 15/16 | 7/15 |
Number of Animals | ELISA Positive | PCR Positive | |
---|---|---|---|
Age, years | |||
1 | 20.5 (88) | 18.2 (16) | 5.7 (5) |
2 | 19.6 (84) | 13.1 (11) | 8.3 (7) |
3 | 14.5 (62) | 35.5 (22) | 30.6 (19) |
4 | 10.0 (43) | 16.3 (7) | 18.6 (8) |
5 or older | 35.4 (152) | 25.0 (38) | 8.6 (13) |
Total | 100 (429) | 21.9 (94) | 12.1 (52) |
BCS | |||
1 | 0.9 (4) | 75.0 (3) | 75.0 (3) |
2 | 17.4 (75) | 25.3 (19) | 12.0 (9) |
3 | 57.4 (248) | 20.6 (51) | 11.7 (29) |
4 | 23.8 (103) | 20.4 (21) | 10.7 (11) |
5 | 0.5 (2) | 0.0 (0) | 0.0 (0) |
Total | 100 (432) | 21.8 (94) | 12.3 (52) |
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Schrott, J.; Sodoma, E.; Dünser, M.; Tichy, A.; Khol, J.L. Mycobacterium avium subsp. paratuberculosis in Sheep and Goats in Austria: Seroprevalence, Risk Factors and Detection from Boot Swab Samples. Animals 2023, 13, 1517. https://doi.org/10.3390/ani13091517
Schrott J, Sodoma E, Dünser M, Tichy A, Khol JL. Mycobacterium avium subsp. paratuberculosis in Sheep and Goats in Austria: Seroprevalence, Risk Factors and Detection from Boot Swab Samples. Animals. 2023; 13(9):1517. https://doi.org/10.3390/ani13091517
Chicago/Turabian StyleSchrott, Juliane, Eva Sodoma, Michael Dünser, Alexander Tichy, and Johannes Lorenz Khol. 2023. "Mycobacterium avium subsp. paratuberculosis in Sheep and Goats in Austria: Seroprevalence, Risk Factors and Detection from Boot Swab Samples" Animals 13, no. 9: 1517. https://doi.org/10.3390/ani13091517
APA StyleSchrott, J., Sodoma, E., Dünser, M., Tichy, A., & Khol, J. L. (2023). Mycobacterium avium subsp. paratuberculosis in Sheep and Goats in Austria: Seroprevalence, Risk Factors and Detection from Boot Swab Samples. Animals, 13(9), 1517. https://doi.org/10.3390/ani13091517