Investigating the Feasibility of Assessing Depression Severity and Valence-Arousal with Wearable Sensors Using Discrete Wavelet Transforms and Machine Learning
Abstract
:1. Introduction
- Validating the potential of implementing ML algorithms with retrospectively collected wearable-derived physiological data for classifying between moderately and severely depressed individuals.
- Assessing the quality of low frequency, general signal features extracted using discrete wavelet transforms (DWT) for developing ML algorithms.
- Examining the relative efficacies of heart rate, galvanic skin response and accelerometry readings in distinguishing between depression severity and emotional states.
- Investigating the role of depression severity in emotional valence and arousal detection.
2. Methodology
2.1. Dataset
2.2. Feature Extraction
2.3. Data Augmentation
- SMOTE is an oversampling technique that increases the number of minority samples in the dataset, by generating new samples from existing minority class samples. The approach generates new samples that are not duplicates, but convex combinations of two or more randomly chosen neighboring data samples in the feature space.
- ADASYN is an adaptive data generation method which creates synthetic samples to reduce class imbalances in a dataset. The approach uses weighted distribution for different minority class samples as per relative difficulty in learning, and generates more samples similar to the harder-to-learn samples. This therefore reduces overall bias present in the dataset, and should improve learning performance of models trained on this data as well.
- SMOTEK and SMOTENN are hybrid techniques that consist of both undersampling and oversampling. Initially, SMOTE performs the over-sampling, then the resulting clusters that overlap on nearby points causing overfitting are removed using Tomek Links, or Nearest Neighbors, respectively, in the methods. The idea here is to clean distributions and lead to a distinct class separation.
- Random under sampling involves randomly discarding samples from the majority class until a balanced class distribution is attained.
- Condensed nearest neighbor undersampling involves the selection of prototypes from the training data, in order to essentially reduce the dataset size for instance-based classification. During this process, the the prototypical instances of the majority class are retained, while likely redundant instances are eliminated from the dataset.
2.4. Machine Learning
3. Results
3.1. Detecting Depression Severity
3.2. Detecting Emotional Arousal and Valence
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
ACC | Accelerometry |
BDI-II | Beck’s Depression Inventory |
CB | CatBoost |
DAPPER | Daily Ambulatory Psychological and Physiological recording for Emotional Research |
DWT | Discrete Wavelet Transforms |
GSR | Galvanic Skin Response |
HR | Heart Rate |
KNN | K-Nearest Neighbors |
LGB | Light Gradient Boosting |
ML | Machine Learning |
RF | Random Forest |
SVC | Support Vector Classifier |
XGB | eXtreme Gradient Boosting |
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Physiological Data | Psychological Data |
---|---|
Heart Rate (HR) | ESM (Experience Sampling Method) |
Galvanic Skin Response (GSR) | DRM (Daily Reconstruction Method) |
ACC Data | - |
Model | Accuracy | Sensitivity | Specificity | F1-Score | AUC |
---|---|---|---|---|---|
LGBM | 64.0 ± 3.0 | 68.2 ± 2.0 | 59.4 ± 5.0 | 66.7 ± 2.0 | 63.8 ± 3.0 |
RF | 64.0 ± 2.0 | 67.3 ± 2.0 | 60.2 ± 5.0 | 66.4 ± 2.0 | 63.8 ± 2.0 |
XGB | 60.7 ± 2.0 | 64.8 ± 2.0 | 56.1 ± 5.0 | 63.5 ± 1.0 | 60.5 ± 2.0 |
CB | 64.0 ± 2.0 | 68.7 ± 3.0 | 58.8 ± 4.0 | 66.8 ± 2.0 | 63.7 ± 2.0 |
KNN | 58.2 ± 2.0 | 61.0 ± 3.0 | 55.0 ± 4.0 | 60.6 ± 2.0 | 58.0 ± 2.0 |
SVC | 60.2 ± 2.0 | 63.0 ± 2.0 | 57.1 ± 5.0 | 62.6 ± 1.0 | 60.1 ± 2.0 |
LR | 55.8 ± 2.0 | 60.2 ± 1.0 | 50.8 ± 4.0 | 59.1 ± 1.0 | 55.5 ± 2.0 |
Model | Accuracy | Sensitivity | Specificity | F1-Score | AUC | Delta |
---|---|---|---|---|---|---|
PPG | 54.0 ± 2.0 | 62.5 ± 3.0 | 44.5 ± 2.0 | 58.9 ± 2.0 | 53.5 ± 2.0 | |
GSR | 56.2 ± 1.0 | 70.7 ± 3.0 | 40.1 ± 1.0 | 63.0 ± 2.0 | 55.4 ± 1.0 | |
ACC | 59.0 ± 2.0 | 65.1 ± 6.0 | 52.3 ± 6.0 | 62.6 ± 3.0 | 58.7 ± 2.0 | |
PPG + GSR | 57.5 ± 2.0 | 67.9 ± 2.0 | 45.8 ± 5.0 | 62.8 ± 1.0 | 56.9 ± 2.0 | |
PPG + ACC | 62.1 ± 1.0 | 65.8 ± 4.0 | 57.9 ± 4.0 | 64.7 ± 2.0 | 61.9 ± 1.0 | |
GSR + ACC | 62.5 ± 1.0 | 68.9 ± 2.0 | 55.4 ± 1.0 | 66.0 ± 1.0 | 62.2 ± 1.0 | |
PPG + GSR + ACC | 64.0 ± 2.0 | 68.7 ± 3.0 | 58.8 ± 4.0 | 66.8 ± 2.0 | 63.7 ± 2.0 | - |
State | Modality | Approach | Accuracy | Sensitivity | Specificity | F1-Score |
---|---|---|---|---|---|---|
Valence | GSR | SVC + SMOTE | 62.9 | 62.8 | 66.7 | 76.6 |
Arousal | ACC | LR + SMOTE | 63.9 | 48.8 | 75.9 | 54.5 |
State | Modality | Approach | Accuracy | Sensitivity | Specificity | F1-Score |
---|---|---|---|---|---|---|
Valence | HR | KNN + SMOTE | 61.2 | 64.0 | 53.3 | 71.0 |
Arousal | GSR | SVC + SMOTEEN | 56.9 | 56.3 | 57.8 | 61.5 |
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Ahmed, A.; Ramesh, J.; Ganguly, S.; Aburukba, R.; Sagahyroon, A.; Aloul, F. Investigating the Feasibility of Assessing Depression Severity and Valence-Arousal with Wearable Sensors Using Discrete Wavelet Transforms and Machine Learning. Information 2022, 13, 406. https://doi.org/10.3390/info13090406
Ahmed A, Ramesh J, Ganguly S, Aburukba R, Sagahyroon A, Aloul F. Investigating the Feasibility of Assessing Depression Severity and Valence-Arousal with Wearable Sensors Using Discrete Wavelet Transforms and Machine Learning. Information. 2022; 13(9):406. https://doi.org/10.3390/info13090406
Chicago/Turabian StyleAhmed, Abdullah, Jayroop Ramesh, Sandipan Ganguly, Raafat Aburukba, Assim Sagahyroon, and Fadi Aloul. 2022. "Investigating the Feasibility of Assessing Depression Severity and Valence-Arousal with Wearable Sensors Using Discrete Wavelet Transforms and Machine Learning" Information 13, no. 9: 406. https://doi.org/10.3390/info13090406
APA StyleAhmed, A., Ramesh, J., Ganguly, S., Aburukba, R., Sagahyroon, A., & Aloul, F. (2022). Investigating the Feasibility of Assessing Depression Severity and Valence-Arousal with Wearable Sensors Using Discrete Wavelet Transforms and Machine Learning. Information, 13(9), 406. https://doi.org/10.3390/info13090406