Synthesis, Characterization, and Biological Properties of the Copper(II) Complexes with Novel Ligand: N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)phenyl]acetamide
Abstract
:1. Introduction
2. Results and Discussion
2.1. Structural Characterization of Ligand HL and Coordination Compounds 1–3
2.2. Biological Activity
2.2.1. Antimicrobial and Antifungal Activity
2.2.2. Antioxidant Activity
2.2.3. Acute In Vivo Toxicity of the Tested Compounds Assessed through Immobilization of the Crustacean Daphnia magna
3. Materials and Methods
3.1. Synthesis
3.1.1. Synthesis of N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)-phenyl]acetamide (HL)
3.1.2. Synthesis of Copper(II) Complexes (1–5)
[Cu(L)CH3COO] (1)
[{Cu(L)Cl}2]·H2O (2)
[Cu(L)H2O·DMF]NO3 (3)
[Cu(L)Br] (4)
[Cu(L)H2O]ClO4 (5)
3.2. FT-IR Spectroscopy
3.3. NMR Spectroscopy
3.4. Molar Conductivity
3.5. Melting Point
3.6. Thin Layer Chromatographic
3.7. X-ray Crystallography
3.8. EPR Study
3.9. Antibacterial and Antifungal Activity
3.10. Antioxidant Activity
3.11. Toxicity
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Identification Code | HL | [Cu(L)CH3COO] (1) |
---|---|---|
CCDC | 2213214 | 2213213 |
Empirical formula | C16H17N5OS | C18H19N5O3SCu |
Formula weight | 327.40 | 448.98 |
Temperature/K | 293(2) | 293(2) |
Crystal system | triclinic | monoclinic |
Space group | P-1 | P21/c |
a/Å | 5.6303(7) | 8.5347(4) |
b/Å | 10.2646(10) | 17.6158(5) |
c/Å | 14.941(2) | 13.5270(5) |
α/° | 108.622(11) | 90 |
β/° | 92.330(11) | 105.779(5) |
γ/° | 91.118(9) | 90 |
Volume/Å3 | 817.11(18) | 1957.08(13) |
Z | 2 | 4 |
ρcalcg/cm3 | 1.331 | 1.524 |
μ/mm−1 | 0.210 | 1.252 |
F(000) | 344.0 | 924.0 |
Crystal size/mm3 | 0.55 × 0.7 × 0.06 | 0.21 × 0.18 × 0.15 |
Radiation | MoKα (λ = 0.71073) | MoKα (λ = 0.71073) |
2Θ range for data collection/° | 5.94 to 50.076 | 6.26 to 50.084 |
Index ranges | −6 ≤ h ≤ 5, −12 ≤ k ≤ 9, 17 ≤ l ≤ 17 | −10 ≤ h ≤ 10, −20 ≤ k ≤ 15, −16 ≤ l ≤ 11 |
Reflections collected | 5061 | 7038 |
Independent reflections | 2881 [Rint = 0.0413, Rsigma = 0.1093] | 3429 [Rint = 0.0363, Rsigma = 0.0613] |
Data/restraints/parameters | 2881/6/213 | 3429/0/256 |
Goodness-of-fit on F2 | 1.035 | 1.013 |
Final R indexes [I ≥2σ (I)] | R1 = 0.0821, wR2 = 0.1964 | R1 = 0.0445, wR2 = 0.0872 |
Final R indexes [all data] | R1 = 0.1530, wR2 = 0.2358 | R1 = 0.0709, wR2 = 0.0975 |
Largest diff. peak/hole/e Å−3 | 0.62/−0.37 | 0.33/−0.30 |
Identification code | [{Cu(L)Cl}2]·H2O (2) | [Cu(L)H2O·DMF]NO3 (3) |
CCDC | 2213215 | 2213216 |
Empirical formula | C16H18N5O2SClCu | C19H25N7O6SCu |
Formula weight | 443.40 | 543.07 |
Temperature/K | 293(2) | N/A |
Crystal system | monoclinic | monoclinic |
Space group | C2/c | P21/n |
a/Å | 15.166(3) | 8.1545(7) |
b/Å | 18.8615(15) | 26.686(2) |
c/Å | 14.090(2) | 10.8802(9) |
α/° | 90 | 90 |
β/° | 117.14(2) | 93.856(8) |
γ/° | 90 | 90 |
Volume/Å3 | 3586.6(12) | 2362.3(3) |
Z | 8 | 4 |
ρcalcg/cm3 | 1.642 | 1.5268 |
μ/mm−1 | 1.505 | 1.063 |
F(000) | 1816.0 | 1126.3 |
Crystal size/mm3 | 0.32 × 0.06 × 0.01 | 0.43 × 0.18 × 0.05 |
Radiation | MoKα (λ = 0.71073) | Mo Kα (λ = 0.71073) |
2Θ range for data collection/° | 6.174 to 50.5 | 5.92 to 50.5 |
Index ranges | −18 ≤ h ≤ 11, −22 ≤ k ≤ 14, −9 ≤ l ≤ 16 | −11 ≤ h ≤ 8, −37 ≤ k ≤ 37, −15 ≤ l ≤ 15 |
Reflections collected | 3484 | 9282 |
Independent reflections | 2313 [Rint = 0.0852, Rsigma = 0.1628] | 4091 [Rint = 0.0634, Rsigma = 0.1693] |
Data/restraints/parameters | 2313/0/240 | 4091/0/314 |
Goodness-of-fit on F2 | 0.892 | 1.011 |
Final R indexes [I ≥ 2σ (I)] | R1 = 0.0713, wR2 = 0.1092 | R1 = 0.0683, wR2 = 0.1090 |
Final R indexes [all data] | R1 = 0.1564, wR2 = 0.1432 | R1 = 0.1396, wR2 = 0.1442 |
Largest diff. peak/hole/e Å−3 | 0.45/−0.40 | 1.37/−0.82 |
Bond | d, Å | |||
---|---|---|---|---|
HL1 | 1 | 2 | 3 | |
Cu1-S1 | 2.2452(11) | 2.257(3) | 2.2458(18) | |
Cu1-O1(Cl1) | 1.942(3) | 2.273(3) | 1.986(4) | |
Cu1-N1 | 1.948(3) | 2.005(8) | 1.972(4) | |
Cu1-N3 | 2.014(3) | 1.981(8) | 2.013(5) | |
Cu1-O2(S1′) | 2.755(3) | 2.982(3) | 2.338(4) | |
S1-C1 | 1.672(5) | 1.747(3) | 1.757(8) | 1.744(6) |
N1-N2 | 1.367(5) | 1.372(4) | 1.370(11) | 1.376(7) |
N1-C2 | 1.288(7) | 1.301(4) | 1.286(13) | 1.288(9) |
N2-C1 | 1.354(7) | 1.322(4) | 1.301(11) | 1.311(7) |
N3-C3 | 1.339(7) | 1.362(4) | 1.343(12) | 1.369(8) |
N4-C1 | 1.339(7) | 1.343(4) | 1.378(12) | 1.351(7) |
C2-C3 | 1.475(6) | 1.462(5) | 1.487(15) | 1.466(11) |
Angle | ω° | |||
S1-Cu1-O1(Cl1) | 97.24(7) | 98.16(10) | 98.65(13) | |
S1-Cu1-N1 | 84.71(8) | 83.4(2) | 84.43(15) | |
S1-Cu1-N3 | 164.46(8) | 163.2(2) | 162.20(16) | |
S1-Cu1-O2(S1′) | 100.77(6) | 96.07(11) | 103.02(13) | |
O1(Cl1)-Cu1-N1 | 174.04(11) | 168.1(3) | 170.24(18) | |
O1(Cl1)-Cu1-N3 | 97.82(10) | 98.2(2) | 94.5(2) | |
N1-Cu1-N3 | 80.68(11) | 79.8(3) | 80.7(2) | |
O1(Cl1)-Cu1-O2(S1′) | 52.17(10) | 91.31(10) | 88.55(16) | |
N1-Cu1- O2(S1′) | 133.09(10) | 100.3(3) | 99.82(16) | |
N3-Cu1- O2(S1′) | 85.55(9) | 87.3(3) | 89.22(19) | |
Cu1-S1-C1 | 94.78(11) | 95.5(3) | 94.86(19) | |
Cu1-N3-C3 | 112.2(2) | 114.5(7) | 112.3(5) | |
Cu1-N1-N2 | 123.58(19) | 124.1(6) | 122.9(3) | |
Cu1-N1-C2 | 118.1(2) | 117.6(7) | 117.3(4) | |
N2-N1-C2 | 118.3(4) | 118.3(3) | 118.3(8) | 119.8(5) |
N1-N2-C1 | 119.1(4) | 111.2(2) | 111.6(6) | 111.3(4) |
S1-C1-N2 | 119.9(3) | 125.4(2) | 125.3(7) | 126.0(4) |
N1-C2-C3 | 115.1(4) | 113.5(3) | 114.1(8) | 114.5(6) |
N3-C3-C2 | 116.5(4) | 115.4(3) | 114.0(9) | 115.0(6) |
D–H⋅⋅⋅A | d(H⋅⋅⋅A) | d(D⋅⋅⋅A) | ∠(DHA) | Symmetry Transformation for Acceptor |
---|---|---|---|---|
HL | ||||
N2-H... S1 | 2.86 | 3.714(4) | 174.0 | 2-x,1-y,2-z |
N5-H... O2 | 1.85 | 2.63(2) | 150.0 | x,-1 + y,z |
1 | ||||
N4-H... O3 | 2.14 | 2.937(4) | 153.0 | x,3/2-y,-1/2 + z |
N5-H... O2 | 2.0 | 2.854(4 | 177.0 | 1-x,1-y,-z |
C5-H... O1 | 2.57 | 3.477(4) | 164.0 | x,3/2-y,-1/2 + z |
C13-H... O3 | 2.54 | 3.211(4) | 130.0 | 2-x,-1/2 + y,-1/2-z |
2 | ||||
O2-H... O1 | 2.15 | 2.878(11) | 144.0 | x. y, z |
N4-H... Cl1 | 2.81 | 3.666(8) | 171.0 | x,2-y,1/2 + z |
N5-H... O2 | 2.26 | 3.105(13) | 166/0 | x,1-y,-1/2 + z |
C7-H... S1 | 2.72 | 3.459(10) | 137/0 | x,2-y,-1/2 + z |
3 | ||||
O2-H... O3 | 1.804 | 2.678(6) | 174.0 | 2-x,1-y,2-z |
O2-H... O5 | 2.33 | 3.088(7) | 165.0 | x, y, z |
O2-H... S1 | 2.86 | 3.214(5) | 110.0 | 1-x,1-y,1-z |
N4-H... O5 | 2.13 | 2.985(7) | 174.0 | 1-x,1-y,1-z |
N5-H... O4 | 2.28 | 3.133(9) | 170.0 | 3/2-x,-1/2 + y,3/2-z |
N5-H... O6 | 2.52 | 3.227(9) | 140.5 | 3/2-x,-1/2 + y,3/2-z |
Compound | Staphylococcus aureus (ATCC 25923) | Escherichia coli (ATCC 25922) | Candida albicans (ATCC 10231) | |||
---|---|---|---|---|---|---|
MIC | MBC | MIC | MBC | MIC | MFC | |
HL | ≥500 | ≥500 | ≥500 | ≥500 | 31.3 | 190.9 |
(1) [Cu(L)CH3COO] | 15.6 | 31.3 | ≥500 | ≥500 | ≥500 | ≥500 |
(2) [{Cu(L)Cl}2]·H2O | 3.9 | 7.8 | 250.0 | 500 | 15.6 | 73.5 |
(3) [Cu(L)H2O·DMF]NO3 | 3.9 | 7.8 | ≥500 | ≥500 | ≥500 | ≥500 |
(4) [Cu(L)Br] | 3.9 | 3.9 | 62.5 | 120.6 | 31.3 | 66.5 |
(5) [Cu(L)H2O]ClO4 | 3.9 | 7.8 | ≥500 | ≥500 | ≥500 | ≥500 |
Nitrofurazone | 4.7 | 9.4 | 4.7 | 4.7 | - | - |
Miconazole | - | - | - | - | 16.0 | 76.9 |
Compound | IC50, µM |
---|---|
HL | 8.5 ± 1.5 |
(1) [Cu(L)CH3COO] | 47.4 ± 1.9 |
(2) [{Cu(L)Cl}2]·H2O | 24.3 ± 1.3 |
(3) [Cu(L)H2O·DMF]NO3 | 23.3 ± 0.9 |
(4) [Cu(L)Br] | 32.4 ± 1.6 |
(5) [Cu(L)H2O]ClO4 | 10.1 ± 0.3 |
Trolox | 33.3 ± 0.2 |
Compound | LC50 (µM) |
---|---|
HL | ≥100 |
(1) [Cu(L)CH3COO] | 3.5 ± 2.8 |
(2) [{Cu(L)Cl}2]·H2O | ≥100 |
(3) [Cu(L)H2O·DMF]NO3 | 8.9 ± 1.3 |
(4) [Cu(L)Br] | 1.0 ± 0.1 |
(5) [Cu(L)H2O]ClO4 | 65.4 ± 11.8 |
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Rusnac, R.; Garbuz, O.; Chumakov, Y.; Tsapkov, V.; Hureau, C.; Istrati, D.; Gulea, A. Synthesis, Characterization, and Biological Properties of the Copper(II) Complexes with Novel Ligand: N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)phenyl]acetamide. Inorganics 2023, 11, 408. https://doi.org/10.3390/inorganics11100408
Rusnac R, Garbuz O, Chumakov Y, Tsapkov V, Hureau C, Istrati D, Gulea A. Synthesis, Characterization, and Biological Properties of the Copper(II) Complexes with Novel Ligand: N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)phenyl]acetamide. Inorganics. 2023; 11(10):408. https://doi.org/10.3390/inorganics11100408
Chicago/Turabian StyleRusnac, Roman, Olga Garbuz, Yurii Chumakov, Victor Tsapkov, Christelle Hureau, Dorin Istrati, and Aurelian Gulea. 2023. "Synthesis, Characterization, and Biological Properties of the Copper(II) Complexes with Novel Ligand: N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)phenyl]acetamide" Inorganics 11, no. 10: 408. https://doi.org/10.3390/inorganics11100408
APA StyleRusnac, R., Garbuz, O., Chumakov, Y., Tsapkov, V., Hureau, C., Istrati, D., & Gulea, A. (2023). Synthesis, Characterization, and Biological Properties of the Copper(II) Complexes with Novel Ligand: N-[4-({2-[1-(pyridin-2-yl)ethylidene]hydrazinecarbothioyl}amino)phenyl]acetamide. Inorganics, 11(10), 408. https://doi.org/10.3390/inorganics11100408