Microbial Properties of Raw Milk throughout the Year and Their Relationships to Quality Parameters
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Collection
2.2. DNA Extraction
2.3. PCR and 16S rRNA Gene Sequencing
2.4. Microbial Data Pre-Processing
2.5. Statistical Analysis
3. Results
3.1. Sequence Quality Control
3.2. Alpha and Beta Diversities of Milk Microbiota Based on Months
3.3. Differences in Microbial Composition of Raw Milk between Samples Collected in Different Months
3.4. Correlation Analysis between Dominant Bacterial Genera and Raw Milk Quality Parameters
4. Discussion
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
Abbreviations
RDA | redundancy analysis |
PCoA | Principal coordinate analysis |
ASVs | amplicon sequence variants |
TA | titratable acidity |
TBC | total bacteria count |
SCC | somatic cell count |
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Month | Chao 1 | ACE | Shannon | Simpson |
---|---|---|---|---|
Jan | 755.69 ± 45.64 ab | 846.90 ± 34.25 ab | 5.12 ± 0.19 b | 0.98 ± 0.01 b |
Feb | 708.80 ± 32.51 ab | 797.71 ± 33.77 ab | 5.24 ± 0.06 ab | 0.99 ± 0.002 ab |
Mar | 728.85 ± 44.85 ab | 809.75 ± 56.20 ab | 5.16 ± 0.11 b | 0.98 ± 0.01 b |
Apr | 794.71 ± 30.32 a | 906.28 ± 25.24 a | 5.39 ± 0.03 ab | 0.99 ± 0.00 ab |
May | 831.98 ± 46.90 a | 916.97 ± 50.83 a | 5.43 ± 0.03 a | 0.99 ± 0.00 a |
June | 870.34 ± 44.58 a | 942.46 ± 37.77 a | 5.38 ± 0.03 ab | 0.99 ± 0.00 ab |
July | 525.98 ± 67.74 bc | 617.68 ± 92.42 bc | 4.49 ± 0.16 c | 0.96 ± 0.01 c |
Aug | 631.03 ± 129.00 b | 692.62 ± 134.51 b | 4.29 ± 0.22 c | 0.95 ± 0.01 c |
Sept | 354.40 ± 52.52 bc | 424.13 ± 66.44 bc | 3.82 ± 0.22 c | 0.91 ± 0.19 c |
Oct | 323.12 ± 58.78 c | 375.38 ± 68.90 c | 3.67 ± 0.28 c | 0.90 ± 0.02 c |
Nov | 444.40 ± 53.90 bc | 523.92 ± 65.27 bc | 4.18 ± 0.30 c | 0.90 ± 0.04 c |
Dec | 268.13 ± 37.29 c | 313.85 ± 43.82 c | 3.54 ± 0.26 c | 0.90 ± 0.22 c |
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Yuan, H.; Han, S.; Zhang, S.; Xue, Y.; Zhang, Y.; Lu, H.; Wang, S. Microbial Properties of Raw Milk throughout the Year and Their Relationships to Quality Parameters. Foods 2022, 11, 3077. https://doi.org/10.3390/foods11193077
Yuan H, Han S, Zhang S, Xue Y, Zhang Y, Lu H, Wang S. Microbial Properties of Raw Milk throughout the Year and Their Relationships to Quality Parameters. Foods. 2022; 11(19):3077. https://doi.org/10.3390/foods11193077
Chicago/Turabian StyleYuan, Huizhi, Sufang Han, Shufei Zhang, Yuling Xue, Yaoguang Zhang, Han Lu, and Shijie Wang. 2022. "Microbial Properties of Raw Milk throughout the Year and Their Relationships to Quality Parameters" Foods 11, no. 19: 3077. https://doi.org/10.3390/foods11193077
APA StyleYuan, H., Han, S., Zhang, S., Xue, Y., Zhang, Y., Lu, H., & Wang, S. (2022). Microbial Properties of Raw Milk throughout the Year and Their Relationships to Quality Parameters. Foods, 11(19), 3077. https://doi.org/10.3390/foods11193077