Prevalence and Haplotypes of Toxoplasma gondii in Native Village Chickens and Pigs in Peninsular Malaysia
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Areas
2.2. Study Design and Sample Size Estimation
2.3. Farm Characteristics
2.4. Blood Sample Collection
2.5. Blood Sample Processing and Serological Examination
2.6. Tissue Sample Collection
2.7. Sample Processing and DNA Extraction
2.8. PCR Amplification, Cloning and Sequencing
2.9. Data Collection
2.10. Data Analysis
3. Results
3.1. Descriptive Statistics of Farms
3.2. Seroprevalence and Risk Factors of Toxoplasma Gondii
3.3. Molecular Prevalence, Haplotypes and Phylogenetic Tree of Toxoplasma gondii
4. Discussion
Limitations of the Study
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Variable | Categories | No. Animals Tested | Positive (%) | 95% CI | No. Farms Tested | Positive (%) | 95% CI |
---|---|---|---|---|---|---|---|
Chickens | - | 250 | 19 (7.60) | 4.60–11.60 | 25 | 13 (52.00) | 31.30–72.20 |
State | Perak | 50 | 3 (6.00) | 1.26–16.55 | 5 | 2 (40.00) | 5.27–85.34 |
Selangor | 90 | 8 (8.89) | 3.92–16.76 | 9 | 4 (44.40) | 13.70–78.80 | |
Melaka | 60 | 5 (8.33) | 2.76–18.39 | 6 | 4 (66.67) | 22.28–95.67 | |
Johor | 50 | 3 (6.00) | 1.26–16.55 | 5 | 3 (60.00) | 14.66–94.73 | |
Pigs | - | 433 | 13 (3.00) | 1.60–5.10 | 19 | 6 (31.58) | 12.60–56.60 |
State | Penang | 102 | 7 (6.86) | 2.80–13.63 | 4 | 3 (75.00) | 19.41–99.37 |
Perak | 100 | 0 | - | 4 | 0 | - | |
Selangor | 28 | 0 | - | 3 | 0 | - | |
Melaka | 102 | 2 (1.96) | 1.00–6.90 | 4 | 2 (50.00) | 6.76–93.24 | |
Johor | 101 | 4 (3.96) | 1.09–9.83 | 4 | 1 (25.00) | 1.00–80.59 |
Risk Factor | Categories | Frequency | Positive (%) | Chi-Square (χ2) | Odds Ratio | p-Value |
---|---|---|---|---|---|---|
States | Perak | 5 | 2 (40.00) | 0.40 | 0.44 (0.04–5.58) | 1.00 |
Selangor | 9 | 4 (44.44) | 0.31 | 0.53 (0.06–4.91) | 1.00 | |
Melaka | 6 | 4 (66.67) | 0.05 | 1.33 (0.11–15.70) | 1.00 | |
Johor | 5 | 3 (60.00) | 1.00 a | |||
Farm system | Free-range | 22 | 12 (54.55) | 0.48 | 2.40 (0.19–30.52) | 0.59 |
Caged | 3 | 1 (33.33) | 1.00 a | |||
Type of feed | Produced on farm | 12 | 9 (75.00) | 4.89 | 6.75 (1.16–39.20) | 0.03 |
Commercial | 13 | 4 (30.77) | 1.00 a | |||
Feed storage | Close | 22 | 10 (45.45) | 1.96 | 0.14 (0.01–3.11) | 0.16 |
Open | 3 | 3 (100) | 1.00 a | |||
Feed location | On ground | 1 | 1 (100.00) | 0.16 | 2.00 (0.06–65.41) | 1.00 |
Off ground | 24 | 12 (50.00) | 1.00 a | |||
Water source | Pipe | 20 | 10 (50.00) | 0.16 | 0.67 (0.09–4.89) | 1.00 |
Well | 5 | 3 (60.00) | 1.00 a | |||
Farm often clean | Yes | 12 | 8 (66.67) | 1.99 | 3.20 (0.62–16.49) | 0.16 |
No | 13 | 5 (38.46) | 1.00 a | |||
Presence of other livestock | Yes | 13 | 9 (69.23) | 3.22 | 4.50 (0.84–24.18) | 0.07 |
No | 12 | 4 (33.33) | 1.00 a | |||
Presence of cat/dog | Yes | 20 | 12 (60.00) | 2.56 | 6.00 (0.56–63.98) | 0.16 |
No | 5 | 1 (20.00) | 1.00 a | |||
Presence of rodents | Yes | 24 | 12 (50.00) | 0.16 | 0.5 (0.01–16.35) | 0.71 |
No | 1 | 1 (100.00) | 1.00 a | |||
Contact with wild animals | Yes | 8 | 6 (75.00) | 2.49 | 4.29 (0.66–27.79) | 0.20 |
No | 17 | 7 (41.18) | 1.00 a | |||
Other animals access feed | Yes | 7 | 5 (71.43) | 1.47 | 3.13 (0.48–20.58) | 0.38 |
No | 18 | 8 (44.44) | 1.00 a | |||
Rodent control program | Yes | 24 | 12 (50.00) | 0.96 | 0.5 (0.01–16.35) | 0.71 |
No | 1 | 1 (100.00) | 1.00 a |
Risk Factor | Categories | Frequency | Positive (%) | Chi-Square (χ2) | Odds Ratio | p-Value |
---|---|---|---|---|---|---|
States | Penang | 4 | 3 (75.00) | 2.00 | 9.00 (0.37–220.90) | 0.49 |
Perak | 4 | 0 | 0.21 | 0.43 (0.01–17.83) | 1.00 | |
Selangor | 3 | 0 | 0.07 | 0.60 (0.01–26.47) | 1.00 | |
Melaka | 4 | 2 (50.00) | 0.03 | 3.00 (0.15–59.88) | 1.00 | |
Johor | 4 | 1 (25.00) | 1.00 a | |||
Farm system | Close | 2 | 0 | 0.23 | 0.46 (0.02–11.87) | 1.00 |
Open | 17 | 6 (35.29) | 1.00 a | |||
Type of feed | Produced on farm | 6 | 2 (33.33) | 0.01 | 1.13 (0.14–8.88) | 1.00 |
Commercial | 13 | 4 (30.77) | 1.00 a | |||
Feed storage | Open | 6 | 2 (33.33) | 0.01 | 1.13 (0.14–8.88) | 1.00 |
Close | 13 | 3 (100) | 1.00 a | |||
Feed location | On ground | 3 | 1 (33.33) | 0.01 | 1.10 (0.08–15.15) | 1.00 |
Off ground | 16 | 5 (31.25) | 1.00 a | |||
Water source | Pipe | 3 | 2 (66.67) | 2.03 | 6.00 (0.42–85.25) | 0.20 |
Well | 16 | 4 (25.00) | 1.00 a | |||
Farm often clean | Yes | 17 | 5 (29.41) | 0.35 | 0.42 (0.02–8.05) | 1.00 |
No | 2 | 1 (28.57) | 1.00 a | |||
Presence of other livestock | Yes | 5 | 2 (40.00) | 0.22 | 1.67 (0.20–14.05) | 1.00 |
No | 14 | 4 (28.57) | 1.00 a | |||
Presence of cat/dog | Yes | 17 | 6 (60.00) | 0.23 | 2.18 (0.08–56.52) | 1.00 |
No | 2 | 0 | 1.00 a | |||
Presence of rodents | Yes | 14 | 5 (35.71) | 0.18 | 0.43 (0.01–24.15) | 1.00 |
No | 5 | 1 (20.00) | 1.00 a | |||
Contact with wild animals | Yes | 8 | 5 (62.50) | 6.12 | 16.67 (1.36–204) | 0.04 |
No | 11 | 1 (9.09) | 1.00 a | |||
Other animals access feed | Yes | 5 | 3 (60.00) | 2.54 | 5.50 (0.61–49.54) | 0.26 |
No | 14 | 3 (21.43) | 1.00 a | |||
Rodent control program | Yes | 18 | 6 (33.33) | 0.49 | 0.5 (0.01–28.42) | 0.68 |
No | 1 | 0 | 1.00 a |
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Leong, S.D.; Hassan, L.; Sharma, R.S.K.; Toung, O.P.; Musa, H.I. Prevalence and Haplotypes of Toxoplasma gondii in Native Village Chickens and Pigs in Peninsular Malaysia. Vet. Sci. 2023, 10, 334. https://doi.org/10.3390/vetsci10050334
Leong SD, Hassan L, Sharma RSK, Toung OP, Musa HI. Prevalence and Haplotypes of Toxoplasma gondii in Native Village Chickens and Pigs in Peninsular Malaysia. Veterinary Sciences. 2023; 10(5):334. https://doi.org/10.3390/vetsci10050334
Chicago/Turabian StyleLeong, Sabrina Danial, Latiffah Hassan, Reuben Sunil Kumar Sharma, Ooi Peck Toung, and Hassan Ismail Musa. 2023. "Prevalence and Haplotypes of Toxoplasma gondii in Native Village Chickens and Pigs in Peninsular Malaysia" Veterinary Sciences 10, no. 5: 334. https://doi.org/10.3390/vetsci10050334
APA StyleLeong, S. D., Hassan, L., Sharma, R. S. K., Toung, O. P., & Musa, H. I. (2023). Prevalence and Haplotypes of Toxoplasma gondii in Native Village Chickens and Pigs in Peninsular Malaysia. Veterinary Sciences, 10(5), 334. https://doi.org/10.3390/vetsci10050334