1. Introduction
The contractile ring of actin and myosin supports cytokinesis, the physical separation of the cytoplasm of a mother cell into two daughter cells. Myosin motor proteins produce contractile forces in cells by binding to and pulling on actin filaments. In fission yeast, three myosins cooperate during cytokinesis: the two Myosin-II, Myo2 and Myp2 (composed of either heavy chain Myo2p or Myp2p and their light chains Rlc1p and Cdc4p), and the Myosin-V, Myo51 (composed of the heavy chain Myo51p, light chains Cam1p and Cdc4p, and accessory proteins Rng8p and Rng9p) [
1]. Cells with mutations in pairs of these three myosins show that Myo2 is most important for ring assembly, while Myp2 is most important during constriction [
1]. Myo51 supports both type-II myosins in their respective roles. How a Myosin-V contributes to cytokinesis remains an unanswered question. Electron microscopy and hydrodynamic measurements of recombinant Myo51p expressed and purified from insect cells show that Myo51 bound by Rng8p/9p is a single headed Myosin-V that interacts with actin filaments both at its motor and tail domains in vitro, suggesting that it may crosslink actin filaments or transport actin filaments within the contractile ring [
2,
3]. Even with this important molecular information about Myo51, how Myo51 supports the role of Myo2 and Myp2 during contractile ring assembly and constriction remains unclear.
The contractile ring is a complex cellular machine with a largely unknown molecular organization. Understanding how proteins organize inside the functional contractile ring is key to uncovering the mechanism of cytokinesis. In fission yeast, the contractile ring assembles by the coalescence of nodes, protein complexes composed of Cdc12p, the FBAR protein Cdc15p, the IQGAP homolog Rng2p and the Myosin-II molecule Myo2, into a continuous contractile ring by a search capture pull and release (SCPR) mechanism. During this mechanism, an actin filament polymerized by Cdc12p in one node is captured by Myo2 in a neighboring node [
4]. Myo2 then pulls on the actin filament, bringing the nodes together. Actin filament connections between nodes must be released by severing from cofilin/Adf1p to prevent the formation of clumps of nodes [
4,
5]. Simulations of this minimalistic SCPR mechanism recapitulate the coalescence of nodes into a contractile ring [
4]. The addition of actin filament crosslinkers recapitulated the alignment of nodes into “linear structures”, seen in wild-type and
cdc25-22 arrested and released cells, and enhanced the robustness of the SCPR mechanism of node coalescence [
6,
7]. The experimental work supports the importance of actin filament crosslinkers alpha-actinin/Ain1p and fimbrin/Fim1p in the alignment of the nodes onto a network of bundles of actin filaments. Ain1p and Fim1p prevent the clumping of nodes and ensure the assembly of a continuous ring without gaps [
6]. Interestingly, cells that lack Myo51p (
∆myo51 cells) exhibit delayed node coalescence and an increased population of immobile nodes, suggesting that Myo51 alone may help engage nodes with the underlying actin filament network [
1,
2].
Advanced microscopy techniques, including single molecule localization microscopy (SMLM) and electron cryotomography (ECT), are beginning to uncover the molecular organization of the contractile ring [
8,
9,
10,
11]. SMLM revealed the molecular organization of nodes with a core of the node containing Cdc15p, Cdc12p, Rng2p and the tips of the Myo2 tails positioned against the cytoplasmic face of the plasma membrane and the heads of Myo2 fanning out into the cytoplasm like an inverted bouquet [
9]. This molecular organization, along with biochemical, cellular biology and mechanical probing, suggest that nodes likely anchor the contractile ring to the plasma membrane and cell wall [
8,
9,
10,
12,
13,
14,
15,
16]. ECT in fission yeast cells revealed the organization of the actin filaments in the constricting ring [
11]. The main bundle of actin filaments is located ~100 nm on the cytoplasmic side of the plasma membrane. Actin filaments within the main bundle are mostly parallel to each other and to the plasma membrane. Actin filament binding proteins, including the passive crosslinker Ain1p, likely organize the actin filaments of the contractile ring into a bundle. About 250 dimers of Ain1p localize to the full-size contractile ring in fission yeast [
17].
∆ain1 cells exhibit a contractile ring assembly defect where nodes coalesce into clumps rather than a uniform contractile ring [
5,
6]. Other proteins likely crosslink actin filaments and compensate for the function of Ain1p as
∆ain1 cells show no defect in contractile ring constriction [
6]. Ain1p and Fim1p compete for actin filament binding and in
∆ain1 cells, Fim1p, a crosslinker typically restricted to actin patches, joins the contractile ring [
18,
19]. Therefore, Fim1p may compensate for the lack of Ain1p in
∆ain1 cells. However, the presence of Fim1p in the contractile ring may also cause alteration of the organization of the actin filament network of the contractile ring owing to differences in the molecular structure of the two crosslinkers.
Here, we investigated the potential role of Myo51 as an actin filament crosslinker during cytokinesis. We hypothesized that if Myo51 crosslinks actin filaments, cells carrying double deletions of
ain1 and
myo51 (
∆ain1 ∆myo51 cells) will exhibit more severe cytokinetic phenotypes than
∆ain1 cells. Similarly to Ain1p, there are ~600 polypeptides of Myo51p in a full-size contractile ring [
6,
17]. Myo51 localized to the inner layer of the contractile ring in an actin-filament-dependent manner during cytokinesis. As previously demonstrated, the loss of Ain1p resulted in clumps of mEGFP-Myo2p forming during ring assembly [
6]. Unexpectedly, deleting
myo51 in
∆ain1 cells partially rescued the severity of the clumping phenotype, suggesting that Myo51 does not simply crosslink actin filaments. We also noticed that constricting contractile rings in
∆ain1 ∆myo51 cells showed ring material extending away from the contractile ring along the ingressing septum. This normal process that we named “shedding” appears to be a mode of contractile ring disassembly that begins during the second half of constriction when the ring is at least 50% constricted. We measured that
∆ain1 ∆myo51 cells exhibit premature and exaggerated shedding, suggesting a role for Myo51 and Ain1p during shedding and perhaps ring disassembly. Our work suggests that Myo51 is not a simple actin filament crosslinker. Instead, Myo51 may act to effectively engage nodes with the actin filament network, resulting in efficient node motions during ring assembly and disassembly.
2. Materials and Methods
2.1. Strains, Growing Conditions and Genetic and Cellular Methods
Table S1 lists the
S. pombe strains described in this study. The strains were created using PCR-based gene targeting to integrate the constructs into the locus of choice and confirmed by PCR, sequencing and fluorescence microscopy [
20]. Primers with 80 bp of homologous sequence flanking the integration site (obtained at
https://bahlerlab.info/resources/ (accessed on 1 December 2023)) and two repeats of GGAGGT to create a 4xGly linker were used to amplify the vector of choice. The cells were grown in the exponential phase at 25 °C for 36–48 h in YE5S-rich liquid medium in 50-mL baffled flasks in a shaking incubator in the dark before imaging. To synchronize the population of cells, we used the temperature-sensitive
cdc25-22 mutation to arrest cells at the G2/M transition at the restrictive temperature of 36 °C for 4 h. We then released cells into mitosis at the permissive temperature of 22 °C as a synchronized population. The cells were concentrated 10- to 20-fold by centrifugation at 2400×
g for 30 s and then resuspended in EMM5S. Then, 5 μL of cells was mounted on a thin gelatin pad consisting of 10 μL 25% gelatin (Sigma-Aldrich, St. Louis, MO, USA; G-2500) in EMM5S, sealed under a #1.5 coverslip with VALAP (1:1:1 Vaseline:Lanolin:Parafin), and observed at 22 °C. The cells were grown in the exponential phase at 25 °C in YE5S-rich liquid medium in 50-mL baffled flasks in a shaking incubator in the dark.
To image cells vertically in microfabricated yeast holders (yeast motels), 5 μL of a diluted resuspension of yeast cells as described above was pipetted onto the surface of a polydimethylsiloxane mold containing wells 6 or 7 µm in diameter and 14 µm in depth [
1]. The mold was then inverted onto a 40 mm in diameter circular #1 coverslip, and the cells were imaged immediately.
To partially depolymerize actin, the cells were treated with 2.5 µM LatA for 6 min before imaging, mounted as described below and imaged immediately.
The comparison of growth between strains was performed with a ten-fold dilution assay of liquid cultures grown in YE5S for 36 h and diluted to maintain OD595 between 0.05 and 0.5. The starting culture for the dilution series was at OD595 0.2, and each following culture was diluted 10 times. Five microliters of each serial dilution was spotted on YE5S plates and incubated for 48 h at 25, 32 or 36 °C. Duplicate plates were prepared for each temperature tested.
2.2. Spinning-Disk Confocal Microscopy
For imaging, the cells were prepared as described above. Fluorescence images of live cells were acquired with a Nikon Eclipse Ti microscope equipped with a 100×/numerical aperture (NA) 1.49 HP Apo TIRF objective (Nikon, Minato City, Japan), 405/561 nm solid state lasers and an electron-multiplying cooled charge-coupled device camera (EMCCD IXon 897; Andor Technology, Belfast, UK) using Nikon Element software (AR 5.02.01, Nikon, Minato City, Japan). The Nikon Element software was used for acquisition.
2.3. Super-Resolution Data Acquisition and Display
Super-resolution imaging was performed as described previously [
9]. The acquired data were processed to localize single molecules as previously described [
8,
9,
21]. The acquired frames were analyzed using a custom sCMOS-specific localization algorithm based on a maximum likelihood estimator (MLE), as described previously [
8,
9,
21,
22]. A log-likelihood ratio was used as the rejection algorithm to filter out overlapping emitters, nonconverging fits, out-of-focus single molecules and artifacts caused by rapid movements during one camera exposure time [
22,
23]. The accepted estimates were reconstructed in a 2D histogram image of 5-nm pixels, where the integer value in each pixel represented the number of localization estimates within that pixel. The images for visualization purposes were generated with each localization convolved with a 2D Gaussian kernel (σ = 7.5 nm). The images were reconstructed from all or a subset of acquired frames and color-coded for either the temporal information (JET LUT map) or for localization density (Heat LUT map). Our localization algorithm eliminated out-of-focus emissions, providing an effective depth of field of ~400 nm [
9].
2.4. Measurement of Contractile Ring Timing
Contractile ring timing was measured by noting the frame in the timelapse micrograph where the spindle pole body (SPB) separated, the contractile ring completed assembly, constriction onset occurred, the contractile ring began shedding, and the contractile ring completed disassembly. If the clumping phenotype was observed, the clumping start and end frames were also noted. The completion of contractile ring assembly was defined as the timepoint at which all material had fully incorporated into a single contractile ring structure. The constriction onset was defined as the timepoint at which the contractile ring began to consistently decrease in diameter on a kymograph. The beginning of contractile ring shedding was defined as the time point at which material could be seen dissociating from the ring in a consistent manner. The completion of contractile ring disassembly was defined as the timepoint at which the signal from the disassembling contractile ring was no longer visible. The beginning of ring clumping was defined as the point at which a dense persistent region of material was formed, creating a nonuniform ring. The end of ring clumping was defined as the time point at which material was observed uniformly across the ring. Log rank tests were used to determine whether there was a significant difference between genotypes (
Table S3).
2.5. Classification of Clumping and Shedding Phenotypes
A ring with mild clumping refers to a contractile ring with no gaps in signal and a mild contrast between stretches of brighter and dimmer fluorescent signal. A ring with severe clumping was defined by a discontinuous fluorescent signal with large gaps in the ring or stretches of intense mEGFP-Myo2p signal separated by dim signal.
Exaggerated shedding was defined as shedding fragments that are long enough to reach the width of the cell and bright enough to obscure the body of the contractile ring, making it difficult to distinguish the contractile ring from the shedding fragment.
2.6. Measurement of Clumping Fluorescence Intensity
Kymographs of rings expressing a clumping phenotype were created and thresholded in ImageJ/Fiji (2.14.0/1.54f, National Institutes of Health, Bethesda, MD, USA) to highlight the region of highest fluorescence caused by the clumping of mEGFP-Myo2p signal [
24]. The mean gray value of this region was used as the fluorescence of the clumping region. To calculate the background fluorescence of the clumped region, a line was drawn from the top to the bottom edge of the kymograph using a line width equal to the size of the clumped region. The mean gray value of this region was used as the background fluorescence. The final fluorescence of the region was calculated by subtracting the background fluorescence from the fluorescence of the clumped region. Student’s
t tests were used to determine whether there was a significant difference in the fluorescence intensity of the clumped regions.
2.7. Measurement of Global Cytoplasmic Fluorescence Intensity
To measure global cytoplasmic fluorescence intensity, sum projections of stacks of 21 optical images separated by 0.36 µm were created from confocal micrographs of cells treated with DMSO or 2.5 µM LatA. Cells of similar size were selected for this analysis. For each cell measured, a region of interest was created with the polygon tool in ImageJ/Fiji (2.14.0/1.54f, National Institutes of Health, Bethesda, MD, USA), encompassing the entire cell, and the total fluorescence intensity within that polygon was measured with the integrated density. Student’s t tests were used to determine whether there was a significant difference in the fluorescence intensity between the DMSO and LatA populations.
2.8. Measurement of Length of Shedding Fragments
The length of the shedding fragments extending from the contractile rings was measured in kymographs. The total width of the cell was estimated as the diameter of the contractile ring before the onset of ring constriction. Student’s t tests were used to determine whether there was a significant difference in the length of shedding fragments between the populations.
2.9. Reporting Summary Statistics
Table S2 lists all the means, standard deviations and sample sizes for all the data reported in swarm plots.
4. Discussion
In this work, we investigated the potential function of Myo51 as a crosslinker of actin filaments. We hypothesized that removing Myo51 in cells that lack the passive actin filament crosslinker Ain1p (
∆ain1 cells) would enhance the
∆ain1 node clumping phenotype observed during contractile ring assembly [
6]. Unexpectedly, removing Myo51 from
∆ain1 partially rescued the node clumping phenotype observed in single mutant
∆ain1 cells. If Myo51 does not act as an actin filament crosslinker, how does it support cytokinesis? During contractile ring assembly, loss of Myo51 results in an increase in the population of immobile nodes, suggesting that Myo51 may help nodes engage with the actin filament network, allowing them to move [
2].
Clumps of Myo2 likely represent the non-uniform distribution of nodes within the contractile ring. Different factors can lead to the formation of clumps of nodes. Rings with clumps of nodes occur in cells with defective “release” in the SCPR mechanism, as seen in cells with mutations in the actin filament severing factor cofilin/Adf1p and in simulations of the SCPR mechanism [
4,
5]. The loss of the actin filament crosslinker Ain1p also results in the clumping of nodes during contractile ring assembly [
6]. Simulations of the minimal SCPR mechanism recapitulate the assembly of the contractile ring by the coalescence of a band of nodes without the need for actin filament crosslinkers. Although the SCPR mechanism may be sufficient to coalesce nodes, the addition of “node alignment” onto bundles of actin filaments made the SCPR mechanism more robust [
6,
7]. Indeed, SMLM of cells in the ring assembly phase show nodes aligned onto linear structures that likely represent actin bundles. Although we observe this phenomenon in SMLM of wild-type cells, the linear structures are more obvious in
cdc25-22 cells arrested and released, likely because the cells are longer and assemble a wider band of nodes [
8,
9]. The increased distance across the band of nodes may facilitate the observation of these structures. The node clumping defect in
adf1 mutant cells is exacerbated by the additional loss of the
ain1 gene, suggesting that the release of actin filament connections between nodes and the alignment of nodes onto actin bundles both contribute to the assembly of a contractile ring with a uniform distribution of nodes [
5].
According to the updated SCPR mechanism, actin filament crosslinkers such as Ain1p bundle actin filaments may increase the overall continuity across the actin filament network that connect the nodes (
Figure 5A). Therefore, the lack of Ain1p likely reduces the connectivity across the network of nodes, resulting in a greater porosity and clumps of nodes [
6,
7]. Myo51 supports node motions promoting their coalescence into the assembling ring [
1,
2]. Efficient node motions in a poorly connected actin filament network in
∆ain1 cells possibly help the formation of clumps. Alternatively, removing Myo51 likely impedes node motions, resulting in clumps with fewer nodes, as we observed in the partial rescue of the clumping phenotype in
∆ain1 ∆myo51 cells.
The clumping phenotype of ∆ain1 and ∆ain1 ∆myo51 cells resolves during ring maturation ahead of constriction without delaying the onset of constriction, suggesting that the recruitment of factors during maturation of the ring may redistribute the protein complexes in the outer ring layer in these mutants. Consistent with this interpretation, deletion of myp2 delays the resolution of clumps, supporting that Myp2 may contribute to this mechanism. The production of contractile forces ahead of constriction may also help redistribute the nodes within the contractile ring.
How the contractile ring disassembles while producing force is one of the major remaining questions about cytokinesis [
26]. In this work, we describe the phenomenon of shedding, a normal process by which proteins appear to exit the contractile ring during the second half of constriction. Every protein from the outer layer of the contractile ring that we observed in this work sheds, and their shedding begins when the ring is more than 50% constricted. During shedding, cytokinetic proteins from the outer layer of the ring exit the contractile ring and align along the ingressing septum in both presumptive daughter cells. The SMLM of contractile shedding suggested that proteins in the shedding fragments may not be assembled into organized node structures. Indeed, the observation that Cdc15p sheds earlier than Myo2p supports that the nodes may be dismantling in the shedding fragments. The proteins of the outer ring layer may be shedding along the ingressing septum because these proteins are directly or indirectly associated with the plasma membrane restricting their distribution. During shedding, proteins of the outer layer of the contractile ring are sometimes organized into filamentous fragments, suggesting that the proteins may be connected to a bundle of actin filaments. The network of actin filaments of the contractile ring at this stage of constriction is obscured by the dynamic actin patches that assemble along the ingressing septum. We therefore could not unambiguously identify bundles of actin filaments among the brighter actin patches in constricted contractile rings. Why cytokinetic proteins shed from the constricting contractile ring near the end of constriction remains to be determined. It is conceivable that the structural organization of the contractile ring changes as its circumference decreases. The curvature of the ring may force this change in organization, resulting in the onset of protein shedding.
Proteins of the inner layer of the contractile ring must also leave the ring but appear to do so differently from the shedding observed for the proteins of the outer layer. When the ring is ~70% constricted (ring of ~3 µm in circumference), short and thick projections of mCherry-Myp2p signal extend from the ring in any direction. As Myp2 associates with the bundle of actin filaments in the inner layer of the contractile ring and not with the plasma membrane, the appearance of mCherry-Myp2p may therefore highlight the breaking down of the underlying bundle of actin filaments during the late stage of constriction. Myo51p-3GFP leaves the ring and appears in the cytoplasm as small aggregates, likely representing groups of Myo51p-3GFP on actin filament bundles.
Our work shows that the combined loss of Myo51 and Ain1p results in premature and exaggerated contractile ring shedding. The loss of actin filament crosslinking by Ain1p may sensitize the contractile ring to other perturbations that can lead to an exaggerated ring shedding phenotype, such as the loss of Myo51 (
Figure 5B). The function of Myo51 during ring shedding is harder to interpret. Unlike during ring assembly, Myo51 may function as a crosslinker of actin filaments during constriction. The combined loss of two actin filament crosslinkers may destabilize the actin network and thus lead to premature and exaggerated shedding with an elongated shedding period. Alternatively, Myo51 may maintain the same role during contractile ring assembly, constriction and shedding: to engage nodes with the actin filament network. Partial loss of engagements between nodes and the actin filament network, combined with the loss of Ain1p crosslinking of actin filaments may result in premature and exaggerated shedding.
The loss of Ain1p from the contractile ring results in the ectopic localization of fimbrin/Fim1p to the contractile ring as the two passive crosslinkers compete for actin filament binding [
18,
19]. The presence, the concentration and the timing of recruitment of Fim1p to the contractile ring of
∆ain1 ∆myo51 cells may help reconcile the complex interplay between Myo51 and Ain1p during cytokinesis. Future work will be necessary to determine whether and how Fim1p may be involved in the clumping and shedding seen in
∆ain1 ∆myo51 cells.