Slope Entropy Characterisation: An Asymmetric Approach to Threshold Parameters Role Analysis
Abstract
:1. Introduction
2. Materials and Methods
2.1. Datasets
- The Bern–Barcelona EEG database [40]. This database comprises a collection of both focal and non-focal time series extracted from seizure-free recordings of patients afflicted with pharmacoresistant focal-onset epilepsy. For the purpose of our experiments, we employed 50 records, each possessing a length of 10,240 data points, sampled at a frequency of 512 Hz. This database has also been used in works such as [41], which includes a review of results achieved in other classification studies based on time series from this same database.
- The Fantasia RR database [42]: It presents a meticulously curated repository comprising a total of 40 individual time series, thoughtfully stratified into two cohorts of 20 records each (mature subjects and a counterpart assembly of youthful subjects). All subjects were, in principle, healthy, thereby obviating possible confounding health-related factors. They were monitored over an extended period of 120 min, with a sampling frequency of 250 Hz. This database has been used in many studies, such as [43,44].
- The Ford A dataset [45]: It is a repository of data gleaned from an automotive subsystem. The principal objective underpinning its creation was the empirical evaluation of the efficacy of classification schemes upon the acoustic characteristics of engine noise. Within the ambit of this experimental undertaking, a corpus of 40 discrete records was selected and subsequently employed for analysis from each distinct class.
- The House Twenty dataset [46,47]: It is a compendium of temporal sequences emanating from 40 distinct domestic entities. They are part of the Personalised Retrofit Decision Support Tools for UK Homes using Smart Home Technology (REFIT) project. This dataset includes data from 40 households, divided into two classes with 20 each: The first class represents the consumption of electricity in general, and the second class represents the specific electrical consumption of dryers and washing machines. We also used this dataset in our previous work [34].
- The PAF (Paroxysmal Atrial Fibrillation) prediction dataset [48]: This dataset comprises discrete 5-min temporal recordings corresponding to patients diagnosed with PAF. These temporal records were classified into two distinct categories: The first pertains to recordings that immediately precede the onset of a PAF episode, while the second encompasses instances temporally distant from any PAF manifestation. Each classification category comprises a total of 25 distinct files. This is a very well-known dataset used in a myriad of scientific works [49,50,51].
- The Worms two-class dataset [52,53]: It contains a time series intrinsically linked to the locomotive patterns exhibited by a distinct species of worm used in the realm of behavioural genetics research. We selected records from two classes: mutant and non-mutant worms. The first type contains 75 records of 900 samples, and the second type has 105 records with the same time series length. As with previous datasets, there are other works that used time series from this one [54,55].
- The Bonn EEG dataset [56,57]. This dataset encapsulates a corpus of 4097 electroencephalograms, each one with a duration of 23.6 s. These instances are distinctly categorised into five salient classes (A, B, C, D, and E), reflecting the underlying diversity of neural activity scenarios under consideration. Specifically, the classes include healthy subjects with eyes open (Class A) and those with eyes closed (Class B). Other instances pertain to epileptic subjects classified as Class C, D, and E (see further details in [57]). For the scope of the specific experiments in the present paper, the focus was directed solely towards classes D and E (seizure-free periods at the epileptogenic zone, and seizure activity from the hippocampal focus), with 100 records from each class. There are many examples available of works using this same dataset [58,59,60].
- The Synthetic database. As its name suggests, it is a collection of datasets that have been generated artificially by a computer. It is composed of three different sets: Synth1, Synth2, and Synth3. Each one of them is composed of two classes; the first one is generated by a normal (Gaussian) distribution, while the other is based on a uniform distribution. Each class contains 20 time series with a length of 3000 samples. Regarding the parameters used to generate the series, Synth1 uses mean = 0 and standard deviation equal to 5 (SD = 5) for its Gaussian class. Synth2’s Gaussian class uses mean = 0 and SD = 10. In the case of Synth3, mean = 0 and SD = 20. On the other hand, the uniform distribution used to generate the second class uses the same parameters for all three datasets, drawing samples uniformly from the range [−1, 1]. It has been included for reference purposes, but it is not used in all the experiments since it is not as illustrative as the real datasets.
- (True Positives) are instances correctly identified as belonging to a particular class.
- (True Negatives) are instances correctly identified as not belonging to that class.
- (False Positives) are instances incorrectly identified as belonging to that class.
- (False Negatives) are instances incorrectly identified as not belonging to that class.
2.2. Slope Entropy
- If > , the symbol assigned to the current active symbolic pattern position is (or just 2), .
- Else, if > , the symbol assigned to the current active symbolic pattern position is (or just 1), .
- Else, if , the case when two consecutive values are very similar (depending on threshold ), which includes the case for ties when [61], the symbol assigned to the current active symbolic pattern position is 0, .
- Else, if but , the symbol assigned to the current active symbolic pattern position is , .
- Otherwise, the symbol assigned is , region where , .
- . In order to obtain the symbolic representation of this subsequence, we compute . Applying the thresholding method described above results in a symbolic pattern .
- . In order to obtain the symbolic representation of this subsequence, we compute . Applying the thresholding method described above results in a symbolic pattern .
- . In order to obtain the symbolic representation of this subsequence, we compute . Applying the thresholding method described above results in a symbolic pattern .
- . In order to obtain the symbolic representation of this subsequence, we compute . Applying the thresholding method described above results in a symbolic pattern .
3. Experiments and Results
3.1. Experiments
3.2. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Conflicts of Interest
References
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Dataset | Baseline | SlpEn with | Parameters |
---|---|---|---|
Bern–Barcelona | 80% | 81% | , , , |
Fantasia | 85% | 89% | , , , |
Ford A | 83% | 94% | , , , |
House Twenty | 95% | 97% | , , , |
PAF prediction | 76% | 84% | , , , |
Worms two-class | 70% | 92% | , , , |
Bonn EEG | 94% | 95% | , , , |
Synth1 | 92% | 95% | , , , |
Synth2 | 87% | 89% | , , , |
Synth3 | 95% | 95% | , , , |
Dataset | Baseline | SlpEn without | Parameters |
---|---|---|---|
Bern–Barcelona | 76% | 77% | , , |
Fantasia | 82% | 89% | , , |
Ford A | 82% | 94% | , , |
House Twenty | 95% | 95% | , , |
PAF prediction | 76% | 80% | , , |
Worms two-class | 69% | 72% | , , |
Bonn EEG | 93% | 93% | , , |
Synth1 | 89% | 89% | , , |
Synth2 | 87% | 89% | , , |
Synth3 | 86% | 89% | , , |
Dataset | SlpEn with | SlpEn without | ||
---|---|---|---|---|
Mean | sd | Mea | sd | |
Bern–Barcelona | 76.81% | 1.82 | 68.04% | 2.98 |
Fantasia | 78.15% | 3.66 | 75.18% | 3.63 |
Ford A | 93.87% | 2.30 | 93.98% | 2.00 |
House Twenty | 97.36% | 0.00 | 75.25% | 1.44 |
PAF prediction | 72.36% | 2.77 | 65.62% | 2.17 |
Worms two-class | 92.02% | 1.18 | 69.49% | 1.63 |
Bonn EEG | 85.41% | 4.42 | 81.63% | 7.01 |
Synth1 | 75.70% | 3.21 | 69.54% | 5.26 |
Synth2 | 71.02% | 2.11 | 68.34% | 4.80 |
Synth3 | 72.06% | 3.31 | 70.63% | 3.60 |
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Kouka, M.; Cuesta-Frau, D.; Moltó-Gallego, V. Slope Entropy Characterisation: An Asymmetric Approach to Threshold Parameters Role Analysis. Entropy 2024, 26, 82. https://doi.org/10.3390/e26010082
Kouka M, Cuesta-Frau D, Moltó-Gallego V. Slope Entropy Characterisation: An Asymmetric Approach to Threshold Parameters Role Analysis. Entropy. 2024; 26(1):82. https://doi.org/10.3390/e26010082
Chicago/Turabian StyleKouka, Mahdy, David Cuesta-Frau, and Vicent Moltó-Gallego. 2024. "Slope Entropy Characterisation: An Asymmetric Approach to Threshold Parameters Role Analysis" Entropy 26, no. 1: 82. https://doi.org/10.3390/e26010082
APA StyleKouka, M., Cuesta-Frau, D., & Moltó-Gallego, V. (2024). Slope Entropy Characterisation: An Asymmetric Approach to Threshold Parameters Role Analysis. Entropy, 26(1), 82. https://doi.org/10.3390/e26010082