Synthesis, X-ray Single Crystal Structure, Molecular Docking and DFT Computations on N-[(1E)-1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propylidene]-hydroxylamine: A New Potential Antifungal Agent Precursor
Abstract
:1. Introduction
2. Results and Discussion
2.1. Chemistry
2.2. Crystal Structure of the Title Compound 4
2.3. Structural Geometry Analysis
2.4. Natural Bond Orbital Analysis
2.5. Vibrational Analysis
2.5.1. Imidazole Ring Vibrations
2.5.2. Methylene Group Vibrations
2.5.3. Benzodioxole Ring Vibrations
2.6. Frontier Molecular Orbital Analysis
2.7. NMR Chemical Shift Analysis
2.8. Molecular Docking Study
2.9. Antifungal Activity of the Title Compound 4
3. Experimental
3.1. General
3.2. Synthesis
3.2.1. Synthesis of 1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propan-1-one (3)
3.2.2. Synthesis of (1E)-1-(2H-1,3-Benzodioxol-5-yl)-N-hydroxy-3-(1H-imidazol-1-yl)propan-1-imine (4)
3.3. Crystal Structure Determination
3.4. FT-IR and FT-Raman Measurements
3.5. Quantum Chemical Calculations
3.6. Antifungal Activity
3.6.1. Materials
3.6.2. Organisms
3.6.3. Preparation of Fungal Inocula
3.6.4. Preparation of the Tested Compound Solution
3.6.5. Antifungal Susceptibility Studies
4. Conclusions
Supplementary Materials
Acknowledgments
Author Contributions
Conflicts of Interest
References
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- Sample Availability: Samples of the synthesized compounds are available from the corresponding author.
D–H···A | D–H | H···A | D···A | D–H···A |
---|---|---|---|---|
O3A–H3OA···N3A i | 1.00(5) | 1.73(5) | 2.722(5) | 176(6) |
O3B–H3OB···N3B ii | 0.98(6) | 1.70(6) | 2.672(5) | 175(8) |
O4–H1O4···N1A | 0.91(7) | 2.38(7) | 3.127(6) | 139(6) |
C3A–H3AB···O3A iii | 0.9900 | 2.4900 | 3.128(6) | 122.00 |
C3B–H3BB···O3B iv | 0.9900 | 2.3600 | 3.080(6) | 129.00 |
C11A–H11A···O4 ii | 0.9500 | 2.2700 | 3.179(7) | 159.00 |
C13A–H13A···O2A iv | 0.9500 | 2.5600 | 3.459(6) | 158.00 |
C13B–H13B···O2B iii | 0.9500 | 2.5200 | 3.424(6) | 160.00 |
C9B–H9BB···N1A v | 0.9900 | 2.5800 | 3.502(6) | 154.00 |
Bond Length (Å) | Bond Angle (°) | Dihedral Angle (°) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Parameters | Calculated | Exp. | Parameters | Calculated | Exp. | Parameters | Calculated | Exp. | |||
Gas Phase | Solution Phase | Gas Phase | Solution Phase | Gas Phase | Solution Phase | ||||||
C1–C2 | 1.3947 | 1.3945 | 1.379 | C1–C2–C3 | 121.40 | 121.44 | 121.60 | C1–C2–C3–C4 | –0.32 | –0.29 | 1.20 |
C2–C3 | 1.3753 | 1.3764 | 1.362 | C1–C2–O9 | 109.69 | 109.67 | 110.05 | C1–C2–C3–H20 | 179.6 | 179.72 | –179.12 |
C3–C4 | 1.4049 | 1.405 | 1.395 | C1–C6–C5 | 117.55 | 117.55 | 117.05 | C1–C2–O9–C8 | 10.37 | 10.84 | –4.10 |
C4–C5 | 1.4001 | 1.4005 | 1.394 | C1–C6–H22 | 121.74 | 121.53 | 121.62 | C1–O7–C8–O9 | 16.91 | 17.41 | –4.55 |
C5–C6 | 1.4181 | 1.4183 | 1.411 | C1–O7–C8 | 105.45 | 105.50 | 105.41 | C1–O7–C8–H23 | 135.54 | 135.89 | 115.78 |
C6–C1 | 1.3707 | 1.3719 | 1.370 | C2–C1–C6 | 122.44 | 122.37 | 122.65 | C2–C1–O7–C8 | –10.64 | –10.95 | 1.95 |
C1–O7 | 1.3743 | 1.374 | 1.376 | C2–C1–O7 | 109.26 | 109.35 | 109.85 | C2–C3–C4–C5 | 0.39 | 0.51 | –1.00 |
C2–O9 | 1.3695 | 1.3695 | 1.382 | C2–C3–C4 | 116.93 | 116.98 | 117.25 | C2–C3–C4–H21 | –179.8 | –179.96 | 178.51 |
C3–H20 | 1.0821 | 1.0822 | 0.950 | C2–O9–C8 | 105.31 | 105.44 | 105.57 | C2–C1–C6–C5 | 0.21 | 0.09 | 1.80 |
C4–H21 | 1.0814 | 1.0815 | 0.950 | C3–C2–O9 | 128.89 | 128.87 | 128.35 | C2–C1–C6–H22 | –179.59 | 179.94 | –179.81 |
C5–C10 | 1.4846 | 1.4847 | 1.482 | C2–C3–H20 | 121.55 | 121.72 | 121.41 | C3–C4–C5–C6 | –0.17 | –0.44 | 1.05 |
C6–H22 | 1.0805 | 1.0808 | 0.950 | C4–C3–H20 | 121.52 | 121.30 | 121.44 | C3–C2–C1–O7 | –178.62 | –178.62 | 179.60 |
C8–O7 | 1.4317 | 1.4372 | 1.424 | C3–C4–C5 | 122.28 | 122.18 | 121.95 | C3–C4–C5–C10 | 178.73 | 178.73 | 177.75 |
C8–O9 | 1.4360 | 1.4401 | 1.418 | C3–C4–H21 | 117.57 | 117.55 | 119.03 | C3–C2–O9–C8 | –170.62 | –170.62 | 177.8 |
C8–H23 | 1.0892 | 1.0877 | 0.990 | C5–C4–H21 | 120.15 | 120.27 | 119.03 | C4–C5–C6–C1 | 0.13 | 0.13 | 2.30 |
C8–H24 | 1.0966 | 1.0943 | 0.990 | C4–C5–C6 | 119.38 | 119.48 | 119.62 | C4–C5–C6–H22 | –179.72 | –179.72 | 179.78 |
C10–C11 | 1.5127 | 1.5133 | 1.519 | C4–C5–C10 | 121.01 | 120.74 | 121.35 | C4–C5–C10–C11 | 16.37 | 16.37 | 19.05 |
C10–N18 | 1.2861 | 1.2868 | 1.288 | C5–C10–C11 | 121.63 | 121.26 | 119.86 | C4–C5–C10–N18 | –163.31 | –163.31 | 164.15 |
C11–C12 | 1.5435 | 1.5427 | 1.523 | C5–C10–N18 | 116.24 | 116.28 | 117.56 | C6–C1–C2–C3 | 0.002 | 0.004 | –1.60 |
C11–H25 | 1.0897 | 1.0894 | 0.990 | C5–C6–H22 | 120.71 | 120.91 | 121.63 | C6–C1–C2–O9 | 178.67 | 178.67 | 178.55 |
C11–H26 | 1.0912 | 1.0915 | 0.990 | C6–C5–C10 | 119.60 | 119.78 | 118.95 | C6–C1–O7–C8 | 170.55 | 170.55 | –178.00 |
C12–N13 | 1.4574 | 1.4620 | 1.459 | C6–C1–O7 | 128.27 | 128.27 | 127.61 | C6–C5–C4–H21 | –179.7 | –179.96 | –179.51 |
C12–H27 | 1.0902 | 1.0894 | 0.990 | O7–C8–O9 | 107.29 | 106.84 | 109.45 | C6–C5–C10–C11 | –164.46 | –164.46 | 159.60 |
C12–H28 | 1.0924 | 1.0911 | 0.990 | O7–C8–H23 | 109.53 | 109.56 | 109.83 | C6–C5–C10–N18 | 15.85 | 15.85 | 17.25 |
N13–C14 | 1.3815 | 1.3802 | 1.370 | O7–C8–H24 | 109.50 | 109.44 | 109.81 | O7–C1–C2–O9 | 0.06 | 0.13 | 1.40 |
N13–C17 | 1.3678 | 1.3629 | 1.349 | O9–C8–H23 | 109.38 | 109.46 | 109.80 | O7–C1–C6–C5 | 178.42 | 178.54 | 179.65 |
C14–C15 | 1.3716 | 1.3713 | 1.360 | O9–C8–H24 | 109.17 | 109.18 | 109.81 | O7–C1–C6–H22 | –1.73 | –1.64 | 0.59 |
C14–H29 | 1.0778 | 1.0776 | 0.950 | C10–C11–C12 | 111.71 | 111.99 | 111.31 | O9–C2–C3–C4 | –178.68 | –178.61 | 178.55 |
C15–N16 | 1.3751 | 1.3795 | 1.377 | C10–C11–H25 | 110.75 | 110.32 | 109.42 | O9–C2–C3–H20 | 1.32 | 1.52 | –1.53 |
C15–H30 | 1.0790 | 1.0792 | 0.950 | C10–C11–H26 | 108.46 | 108.41 | 109.42 | C10–C5–C6–C1 | –179.05 | –179.29 | –178.45 |
N16–C17 | 1.3142 | 1.3197 | 1.323 | C11–C10–N18 | 122.12 | 122.46 | 122.83 | C10–C5–C4–H21 | –0.79 | –1.78 | –1.11 |
C17–H31 | 1.0802 | 1.0798 | 0.950 | C11–C12–N13 | 112.49 | 112.05 | 111.10 | C10–C5–C6–H22 | 1.09 | 0.90 | 1.52 |
N18–O19 | 1.4067 | 1.4061 | 1.409 | C12–C11–H25 | 109.89 | 109.89 | 109.42 | C5–C4–C3–H20 | –179.53 | –179.49 | 178.63 |
O19–H32 | 0.9631 | 0.9647 | 0.985 | C12–C11–H26 | 108.47 | 108.56 | 109.43 | C12–N13–C14–C15 | 176.72 | 177.67 | 176.55 |
Donor (i) | Occupancy(e) | Acceptor (j) | Occupancy(e) | E(2) a kcal/mol | E(j) – E(i) b (a.u) | F(i,j) c (a.u) |
---|---|---|---|---|---|---|
π(C1–C6) | 1.70639 | π*(C2–C3) | 0.36424 | 20.27 | 0.29 | 0.070 |
π(C1–C6) | 1.70639 | π*(C4–C5) | 0.37847 | 17.86 | 0.30 | 0.067 |
π(C2–C3) | 1.69340 | π*(C1–C6) | 0.33036 | 18.94 | 0.30 | 0.068 |
π(C2–C3) | 1.69340 | π*(C4–C5) | 0.37847 | 19.07 | 0.30 | 0.069 |
π(C4–C5) | 1.69274 | π*(C1–C6) | 0.33036 | 17.00 | 0.29 | 0.063 |
π(C4–C5) | 1.69274 | π*(C2–C3) | 0.36424 | 17.47 | 0.28 | 0.063 |
π(C4–C5) | 1.69274 | π*(C10–N18) | 0.18707 | 17.62 | 0.28 | 0.064 |
π(C14–C15) | 1.85899 | π*(N16–C17) | 0.37926 | 14.88 | 0.28 | 0.061 |
LP2(O7) | 1.85977 | π*(C1–C6) | 0.33036 | 25.80 | 0.36 | 0.090 |
LP2(O9) | 1.85270 | π*(C2–C3) | 0.36424 | 27.07 | 0.35 | 0.093 |
LP1(N13) | 1.55644 | π*(C14–C15) | 0.30606 | 30.67 | 0.29 | 0.087 |
LP1(N13) | 1.55644 | π*(N16–C17) | 0.37926 | 46.28 | 0.28 | 0.103 |
LP1(N18) | 1.95533 | σ*(C10–C11) | 0.03261 | 8.70 | 0.83 | 0.076 |
LP1(O19) | 1.99160 | σ*(C11–H25) | 0.01285 | 0.67 | 1.11 | 0.024 |
LP2(O19) | 1.90883 | π*(C10–N18) | 0.18707 | 15.97 | 0.35 | 0.068 |
Wavenumber | Intensity | Assignment with PED % (≥10%) | |||
---|---|---|---|---|---|
Expt. | Calc. | IR a (km·mol–1) | Raman b (m2·sr−1) | ||
νIR (cm–1) | νRaman (cm–1) | νScal (cm–1) | |||
3830 | 131.118 | 7.45 | ν (O19–H32) (100) | ||
3144 | 3145 | 3128 | 1.497 | 8.37 | νring II (C–H) (99) |
3121 | 3120 | 3118 | 2.054 | 7.851 | νring II (C–H) (99) |
3114 | 3118 | 3103 | 4.324 | 10.20 | νring II (C–H) (99) |
- | 3073 | 3096 | 3.035 | 6.57 | νring II (C–H) (99) |
3018 | - | 3056 | 1.286 | 5.39 | νring I (C–H) (99) |
3007 | 3001 | 3026 | 2.149 | 10.90 | νring I (C–H) (99) |
2993 | - | 3017 | 3.215 | 11.70 | νring I (C–H) (99) |
- | 2970 | 2977 | 9.230 | 2.62 | νas (CH2) Me III(93) |
2945 | 2946 | 2944 | 29.934 | 17.60 | νas (CH2) Me I (75) + νs (CH2) Me I (25) |
- | - | 2934 | 23.671 | 11.10 | νs (CH2) Me III (98) |
- | - | 2927 | 4.531 | 7.86 | νas (CH2) Me II (93) |
- | 2908 | 2889 | 6.873 | 10.60 | νs (CH2) Me II (98) |
- | 2845 | 2836 | 118.557 | 27.20 | νs (CH2) Me I (74) + νas (CH2) Me I (26) |
- | 1629 | 1629 | 14.078 | 73.10 | ν (C10–N18) (71) |
1595 | 1606 | 1591 | 24.766 | 100.00 | νring I (CC) (53) + β (CH) Ring I (16) |
- | - | 1581 | 3.985 | 20.60 | νring I (CC) (58) + β (CH) Ring I (14) |
- | - | 1560 | 0.336 | 14.40 | Sci(HC) Me I (89) |
1503 | 1516 | 1504 | 44.673 | 2.85 | β (CH) Ring II (41) + ν (C17–N16) (28) +ν (NC) (12) |
- | - | 1492 | 179.197 | 6.28 | β (CH) Ring I (50) + νring I (CC) (32) |
1493 | 1494 | 1490 | 17.736 | 6.84 | ν (C14–C15) (35) + β (CH) Ring II (29) +ν (NC) (11) |
1450 | - | 1457 | 14.740 | 4.35 | Sci (CH2) Me II (37) + τ (CN) (31) + Sci (CH2) Me III (16) |
- | - | 1444 | 3.326 | 21.40 | ω (CH2) Me I (88) |
1439 | 1440 | 1442 | 25.303 | 19.50 | Sci (CH2) Me II + τ (CN) (25) + Sci (CH2) Me III (14) |
1428 | - | 1424 | 55.376 | 5.77 | νring I (CC) (44) + β (CH) Ring I (34) |
1401 | 1403 | 1390 | 17.021 | 13.50 | τ (CN) (47) + ω (CH2) Me III (30) |
1364 | - | 1369 | 2.376 | 5.68 | ν (NC) (28) + τ (CN) (17) + ω (CH2) Me III (12) + ρ (CH2) Me III (12) + twi (CH2) Me III (12) |
1350 | 1346 | 1341 | 2.477 | 15.10 | β (CH) Ring II (39) + ν (C17–N16) (31) + ν (NC) (15) |
1313 | 1314 | 1324 | 38.626 | 10.90 | β (CH) Ring I (40) + ν (CC) (37) + δa (Ring I) (10) |
- | - | 1301 | 90.153 | 46.50 | νring I (CC) (32) + β (CH) Ring I (15) |
1280 | 1291 | 1293 | 9.747 | 28.50 | β (CH) Ring II (55) + ν (C17–N16) (16) |
- | 1271 | 1276 | 18.733 | 10.70 | ω (CH2) Me II (62) |
1255 | 1254 | 1251 | 4.921 | 3.83 | Twi (CH2) Me II (34) + τ (CN) (24) + ρ (CH2) Me III (10) + Twi (CH2) Me III (10) |
- | - | 1225 | 26.089 | 28.90 | ω (CH2) Me I (37) |
1225 | 1232 | 1224 | 199.125 | 31.10 | β (NOH) (23) + CO (13) + CC (12) |
- | - | 1222 | 78.688 | 30.70 | ν (NC) (16) + CN (13) + β (CH) Ring II (13) + Twi (CH2) Me I (11) |
- | - | 1208 | 103.083 | 19.30 | β (NOH) (23) + νring I (CC) (16) + ν (CO) (10) + β (CH) Ring I (10) |
- | - | 1202 | 120.699 | 19.90 | νring I (CC) (30) + ν (C5–C10) (10) + β (NOH) (10) |
1173 | 1174 | 1151 | 4.028 | 2.22 | νring I (CC) (25) + β (CH) Ring I (25) |
1147 | 1141 | 1136 | 6.792 | 2.61 | ν (NC) (28) + Twi (CH2) Me I (14) + νring I (CC) (14) + β (CH) Ring I (12) |
- | - | 1124 | 5.682 | 2.44 | ρ (CH2) Me I (56) + τ (CO) (10) + νring I (CC) (10) |
1108 | 1107 | 1111 | 12.714 | 7.30 | ν (NC) (32) + β (CH) Ring II (25) + ν (C14–C15) (11) |
1085 | 1083 | 1097 | 54.779 | 15.00 | δ (Ring I) (20) + ν (CO) (16) + ν (NC) (14) |
- | 1050 | 1079 | 51.301 | 13.80 | β (CH) Ring II (43) + ν (NC) (32) + ν (C14–C15)(15) |
1035 | 1030 | 1032 | 12.857 | 19.20 | τ (CN) (25) + ρ (CH2) Me III (21) + Twi (CH2) Me III (21) |
1016 | - | 1019 | 121.778 | 4.74 | ν (OC) (36) + τ (CN) (11) |
957 | 956 | 1000 | 50.386 | 9.32 | ν (CC) (26) + νring I (CC) (14) |
- | - | 972 | 6.193 | 14.00 | ν (CC)(66) |
936 | - | 966 | 16.460 | 14.90 | δ (Ring I) (34) + ν (NC) (27) + ν (CN) (13) |
- | - | 935 | 3.579 | 3.29 | ω (CH) Ring I (86) |
924 | 922 | 921 | 100.257 | 9.39 | ν (N18–O19) (34) + τ (CN) (14) +ρ (CH2) Me III (10) + Twi (CH2) Me III (10) |
895 | 893 | 896 | 54.208 | 6.21 | ν (CO) (70) + δ (Ring I) (14) |
878 | - | 883 | 61.051 | 8.07 | ν (CO) (24) + ν (N18–O19) (16) + δ (Ring I) (13) |
854 | 850 | 851 | 24.434 | 2.27 | ω (CH) Ring I (77) |
- | - | 841 | 2.112 | 2.68 | ω (CH) Ring II(87) |
- | - | 818 | 7.104 | 4.86 | γ (Ring II) (89) |
808 | 814 | 809 | 21.360 | 7.71 | ω (CH) Ring I (84) |
799 | - | 798 | 13.387 | 28.60 | νring I (CC) (33) + ν (CO) (18) + ν (CO) (13) |
752 | - | 785 | 32.319 | 4.73 | ω (CH) Ring II (77) + ORO (11) |
743 | - | 756 | 2.956 | 6.19 | τ (CN) (40) + ρ (CH2) Me III (17) + twi (CH2) Me III (17) |
- | - | 743 | 2.742 | 5.72 | τ (CN) (26) + ρ (CH2) Me III (11) + twi (CH2) Me III (11) |
- | - | 733 | 9.478 | 12.10 | τ (CN) (37) + ρ (CH2) Me III (15) + twi (CH2) Me III (15) |
725 | 721 | 706 | 33.336 | 14.00 | ω (CH) Ring II (82) + τ (CN) (14) |
716 | - | 704 | 3.019 | 15.40 | γ (Ring I) (18) + δ (Ring I) (11) + γ (Ring I) (11) |
- | - | 690 | 5.722 | 5.12 | puc (Ring I) (61) + ω (CC) (13) + τa (Ring I) (10) |
- | 692 | 650 | 5.478 | 2.91 | ω (CC) (15) + τa (Ring I) (12) + τ (Ring I) (10) |
658 | 658 | 629 | 17.050 | 1.48 | τa (Ring II) (69) + τ (CN) (17) |
621 | 626 | 614 | 18.672 | 4.91 | δ (Ring II) (17) + ν (C12–N13) (15) + ν (CC) (11) |
578 | 573 | 592 | 11.347 | 7.42 | τa (Ring II) (62) + ω (CC) (11) |
556 | - | 582 | 14.299 | 9.94 | δ (Ring I) (30) |
492 | 490 | 530 | 5.947 | 2.11 | τ (CN) (20) + ω (CC) (14) + puc (14) |
- | - | 447 | 5.385 | 7.04 | γ (Ring I) (20) + OC (19) + δ (Ring I) (15) |
433 | 449 | 440 | 19.054 | 7.96 | β (CNO) (21) + δ (Ring I) (15) + ν (CC) (10) |
425 | - | 424 | 86.609 | 9.89 | τ (NO) (72) |
417 | - | 405 | 13.261 | 4.70 | τa (Ring I) (36) + butt (35) + τ (Ring I) (14) |
- | 387 | 361 | 1.486 | 7.82 | τ (CN) (26) + β (CN) (20) + τ (CN) (10) |
- | - | 341 | 1.034 | 10.40 | τ (CN) (30) + Sci (13) + OC (12) |
- | 330 | 333 | 0.753 | 9.09 | τ (CN) (67) + β (CN) (11) |
- | 303 | 303 | 4.676 | 15.80 | τ (CN) (38) + τ (CN) (15) + butt (11) |
- | 277 | 260 | 1.201 | 20.60 | τ (CN) (69) |
- | 230 | 222 | 0.661 | 34.50 | τ (CN) (51) + ρ (OC) (10) |
- | - | 215 | 0.930 | 29.90 | τa (Ring II) + (24) + τ (Ring I) (24) |
- | - | 180 | 0.384 | 13.60 | τ (CN) (73) + β (CC) (10) |
- | - | 138 | 0.183 | 22.60 | τ (CN) (37) + Sci (20) |
- | - | 126 | 7.961 | 18.10 | τ (Ring I) (40) + τ (CN)(18) + τ (CN) (18) + τ (CN) (14) |
- | - | 91 | 5.187 | 119.00 | τ (CN) (27) + τ (Ring I) (17) + ω (CC) (12) + τ (CN)(10) |
- | - | 72 | 1.075 | 156.00 | τ (CN) (99) |
- | - | 64 | 0.692 | 162.00 | τ (CN) (78) |
- | - | 29 | 1.601 | 104.00 | τ (CN) (98) |
- | - | 20 | 1.176 | 312.00 | τ (CN) (99) |
- | - | 16 | 0.169 | 328.00 | τ (CN) (86) |
Carbon Atoms (13C) | Hydrogen Atoms (1H) | ||||
---|---|---|---|---|---|
Atoms | Value (ppm) | Atoms | Value (ppm) | ||
Calc. | Exp. | Calc. | Exp. | ||
C1 | 127.25 | 148.0 | H20 | 5.81 | 6.84 |
C2 | 127.81 | 148.3 | H21 | 7.01 | 7.06 |
C3 | 89.62 | 108.5 | H22 | 5.89 | 7.13 |
C4 | 107.84 | 120.5 | H23 | 5.40 | 6.04 |
C5 | 107.85 | 130.3 | H24 | 5.20 | 6.04 |
C6 | 89.80 | 106.1 | H25 | 1.92 | 3.14 |
C8 | 87.78 | 101.7 | H26 | 2.23 | 3.14 |
C10 | 132.24 | 153.7 | H27 | 3.40 | 4.17 |
C11 | 29.66 | 28.2 | H28 | 3.64 | 4.17 |
C12 | 38.54 | 43.3 | H29 | 6.05 | 6.89 |
C14 | 100.78 | 119.9 | H30 | 5.94 | 7.19 |
C15 | 109.30 | 128.3 | H31 | 6.38 | 7.66 |
C17 | 115.68 | 137.5 |
Compound No. | MIC (μmol/L) | |||
---|---|---|---|---|
C. albicans | C. tropicalis | C.parapsilosis | Aspergillus niger | |
4 | 987.43 | 987.43 | 987.43 | 987.43 |
Ketoconazole | 7.53 | 15.05 | 15.05 | 15.05 |
Chemical Formula | 2(C13H13N3O3)·C3H8O |
---|---|
Molecular weight | 578.62 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 296 |
a, b, c (Å) | 9.0963(3), 14.7244(6), 10.7035(4) |
β(°) | 94.298(3) |
V (Å3) | 1429.57(9) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm–1) | 0.81 |
Crystal size (mm) | 0.40 × 0.23 × 0.11 |
Data collection | |
Diffractometer | Bruker APEX-II CCD diffractometer |
Absorption correction | Multi-scan, SADABS Bruker 2014 |
Tmin, Tmax | 0.740, 0.916 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6654, 3851, 2788 |
Rint | 0.039 |
Refinement | |
R[F2> 2σ(F2)] a, wR(F2) b, S | 0.059, 0.144, 1.03 |
No. of reflections | 3851 |
No. of parameters | 393 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e·Å–3) | 0.26, −0.23 |
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Al-Wabli, R.I.; Al-Ghamdi, A.R.; Ghabbour, H.A.; Al-Agamy, M.H.; Monicka, J.C.; Joe, I.H.; Attia, M.I. Synthesis, X-ray Single Crystal Structure, Molecular Docking and DFT Computations on N-[(1E)-1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propylidene]-hydroxylamine: A New Potential Antifungal Agent Precursor. Molecules 2017, 22, 373. https://doi.org/10.3390/molecules22030373
Al-Wabli RI, Al-Ghamdi AR, Ghabbour HA, Al-Agamy MH, Monicka JC, Joe IH, Attia MI. Synthesis, X-ray Single Crystal Structure, Molecular Docking and DFT Computations on N-[(1E)-1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propylidene]-hydroxylamine: A New Potential Antifungal Agent Precursor. Molecules. 2017; 22(3):373. https://doi.org/10.3390/molecules22030373
Chicago/Turabian StyleAl-Wabli, Reem I., Alwah R. Al-Ghamdi, Hazem A. Ghabbour, Mohamed H. Al-Agamy, James Clemy Monicka, Issac Hubert Joe, and Mohamed I. Attia. 2017. "Synthesis, X-ray Single Crystal Structure, Molecular Docking and DFT Computations on N-[(1E)-1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propylidene]-hydroxylamine: A New Potential Antifungal Agent Precursor" Molecules 22, no. 3: 373. https://doi.org/10.3390/molecules22030373
APA StyleAl-Wabli, R. I., Al-Ghamdi, A. R., Ghabbour, H. A., Al-Agamy, M. H., Monicka, J. C., Joe, I. H., & Attia, M. I. (2017). Synthesis, X-ray Single Crystal Structure, Molecular Docking and DFT Computations on N-[(1E)-1-(2H-1,3-Benzodioxol-5-yl)-3-(1H-imidazol-1-yl)propylidene]-hydroxylamine: A New Potential Antifungal Agent Precursor. Molecules, 22(3), 373. https://doi.org/10.3390/molecules22030373