4.1. Synthesis of GAELs
Solvents were dried over CaH
2.
1H-,
13C-NMR spectra were recorded on an Avance 300 NMR spectrometer (Bruker, Rheinstetten, Germany), and chemical shifts reported (in ppm) relative to internal Me
4Si (δ = 0.0) and at 75 MHz, respectively. NMR spectra (
1H-NMR,
13C-NMR) of compounds
2–
6 are provided in the
Supplementary Materials. Thin-layer chromatography (TLC) was carried out on aluminum or glass-backed silica gel GF plates (250 µm thickness) and plates were visualized by charring with 5% H
2SO
4 in MeOH and or short wavelength UV light. Compounds were purified by flash chromatography on silica gel 60 (230–400 ASTM mesh). ESI-MS analyses were performed on a 500 MS Ion Trap Mass Spectrometer (Varian, Walnut Creek, CA, USA). MALDI-TOF-MS were performed on a Bruker Daltonics Ultraflex MALDI TOF/TOF Mass Spectrometer (Bremen, Germany). Purity of compound
2–
6 was assessed by
1H-NMR spectroscopy after reverse phase chromatography.
1,2,3,4-l-Rhamnopyranosyl Tetraacetate (9)
l-Rhamnose 8 (0.99 g, 5.49 mmol) was dissolved in 20.0 mL pyridine at room temperature, then acetic anhydride (5.20 mL, 54.90 mmol) and dimethyl amino pyridine (0.10 g) were sequentially added and the reaction was vigorously stirred for 18 h after which it was stopped by addition of methanol (10.0 mL) and then stirred for 15 min. The solvents were removed under high vac. The resulting residue was then dissolved in ethyl acetate (50.0 mL) and washed with 3% HCl solution (1 time), saturated sodium bicarbonate (2 times), distilled water (1 time) and brine (1 time). The resulting organic layer was dried over Na2SO4 and concentrated to dryness and purified by flash chromatography using ethyl acetate and hexane (1:1) to give 9 (1.71 g, 5.12 mmol) as α, β mixture (9:1). Yield was 93%. NMR data for α- anomer of compound 9: 1H-NMR (300 MHz, chloroform-d) δ 6.01 (d, J = 1.8 Hz, 1H, H-1), 5.31 (dd, J = 10.1, 3.5 Hz, 1H, H-3), 5.25 (dd, J = 3.5, 1.8 Hz, 1H, H-2), 5.12 (dd, J = 10.1, 9.9 Hz, 1H, H-4), 3.93 (m, 1H), 2.17 (s, 3H), 2.16 (s, 3H), 2.06 (s, 3H), 2.00 (s, 3H), 1.24 (d, J = 6.2 Hz, 3H, H-6). 13C-NMR (75 MHz, CDCl3) δ 170.05, 169.81, 169.79, 168.35, 90.65, 70.48, 68.77, 68.72, 68.65, 20.89, 20.77, 20.74, 20.67, 17.44. ES-MS: calculated (calcd): C14H20O9Na+ m/z: 355.1, found [M + Na]+ m/z: 355.5.
Phenyl-2,3,4-triacetyl-1-thio-α-l-rhamnopyranoside (10)
The tetraacetate 9 (1.71 g, 5.12 mmol) was dissolved in in 20.0 mL DCM, then thiophenol (0.68 g, 6.14 mmol) and BF3·Et2O (0.87 g, 6.14 mmol) were sequentially added. The reaction was stirred vigorously for 18 h after which it was stopped with 20 mL saturated sodium bicarbonate at 0 °C. The organic layer was separated using separatory funnel and subsequently washed with saturated 20.0 mL of sodium bicarbonate (2 times), 20.0 mL of water (1 time) and 20.0 mL of brine (1 time). The organic layer was dried over anhydrous sodium bicarbonate and then concentrated under vacuum. The residue was then purified by flash chromatography using ethyl acetate and hexane (4:6) to give mainly α-anomer of 10 (1.72 g, 4.5 mmol). Yield was 88%. NMR data for the anomer of compound 10: 1H-NMR (300 MHz, chloroform-d) δ 7.59–7.22 (m, 5H, aromatic protons), 5.51 (dd, J = 3.4, 1.1 Hz, 1H, H-2), 5.42 (d, J = 1.1 Hz, 1H, H-1), 5.30 (dd, J = 10.0, 3.4 Hz 1H, H-3), 5.19 (dd, J = 9.6, 10.0 Hz, 1H, H-4), 4.42–4.34 (m, 1H, H-5), 2.15 (s, 3H), 2.09 (s, 3H), 2.05 (s, 3H), 1.26 (d, J = 6.2 Hz, 3H, H-6). 13C- NMR (75 MHz, CDCl3) δ 169.99, 169.98, 169.91, 132.08, 131.85, 129.19, 127.89, 85.71, 71.34, 71.17, 69.40, 67.79, 20.91, 20.82, 20.69, 17.35. ES-MS: calcd: C18H22O7SNa+m/z: 405.1, found [M + Na]+ m/z: 405.3.
1-Hexadecyloxyl-2R-methoxyl-3-(2′3′4′-triacetyl-α-l-rhamnopyranosyl)-sn-glycerol (12)
The fully protected glycoside donor 10 (153 mg, 0.4 mmol) and the glycoside acceptor 11 (140 mg, 0.4 mmol) were dissolved in 15 mL of DCM under argon atmosphere, then AgOTf (0.02 g, 0.08 mmol) and N-iodosuccinimide (0.14 g, 0.60 mmol) were simultaneously added. The reaction was vigorously stirred for 2 h after which it was stopped with saturated solution of sodium thiosulphate (5.0 mL) and then washed with 25.0 mL of saturated sodium thiosulphate solution (1 time), saturated sodium bicarbonate (3 times), water (1 time) and brine (1 time). The organic layer was then dried over anhydrous sodium sulphate and then concentrated under vac. The residue, was purified by flash chromatography using ethyl acetate/hexane mixture (4:6) to give the α-anomer, 12 (0.19 g, 0.31 mmol) as a white solid. Yield was 58%. NMR data of 12: 1H-NMR (300 MHz, chloroform-d) δ 5.36–5.19 (m, 2H, H-2, H-3), 5.04 (dd, J = 9.7, 9.7 Hz, 1H, H-4), 4.73 (d, J = 1.5 Hz, 1H, H-1), 3.93–3.84 (m, 1H, H-5), 3.79–3.63 (m, 1H), 3.61–3.34 (m, 9H), 2.12 (s, 3H), 2.02 (s, 3H), 1.96 (s, 3H), 1.50–1.48 (m, 2H), 1.23 (broad s, 26H, lipid tail), 1.20 (d, J = 6.2 Hz, 3H, H-6), 0.85 (t, J = 6.6 Hz, 3H, terminal lipid CH3). 13C-NMR (75 MHz, CDCl3) δ 170.01, 169.92, 169.87, 97.58, 78.94, 71.78, 71.12, 69.80, 69.67, 69.12, 67.35, 66.34, 58.20, 31.89, 29.66, 29.62, 29.47, 29.33, 26.09, 22.65, 20.85, 20.74, 20.67, 17.39, 14.08. ES-MS: calcd: C32H58O10Na+ m/z: 625.4, found [M + Na]+ m/z: 624.8.
1-Hexadecyl-2R-methoxyl-3-O-α-l-rhamnopyranosyl-sn-glycerol (2)
Compound 12 (0.19 g, 0.31 mmol) was dissolved in 15.0 mL of methanol, then catalytic amount of sodium methoxide was added and the reaction was vigorously stirred for 3 h. The reaction was stopped by acidic ion exchange resin. The resin was filtered and the filtrate was concentrated under vacuum and the residue was purified by flash chromatography using ethyl acetate/hexane mixture (9:1) to give 2 (0.11 g, 0.23 mmol) as a white solid. Yield was 75%. NMR data of 2: 1H-NMR (300 MHz, chloroform-d) δ 4.78 (d, J = 1.1, 1H, H-1), 4.12 (s, 3H, OH, rhamnose-OH), 3.97 (dd, J = 1.1, 3.3 Hz, 1H, H-2), 3.83–3.63 (m, 3H), 3.63–3.53 (m, 1H), 3.53–3.36 (m, 9H), 1.56 (m, 2H), 1.31 (d, J = 6.0 Hz, 3H, H-6), 1.28 (broad s, 26H, lipid tail), 0.89 (t, J = 6.5 Hz, 3H, terminal lipid CH3). 13C-NMR (75 MHz, CDCl3) δ 99.92, 79.03, 72.80, 71.84, 71.68, 70.89, 69.99, 68.24, 66.71, 58.04, 31.94, 29.72, 29.69, 29.37, 26.13, 22.70, 17.55, 14.12. MALDI-HRMS: calcd: C26H52O7Na+ m/z: 499.3611, found [M + Na]+ m/z: 499.3615.
3-Hexadecyloxy-2R-hydroxyl propyl-1-p-toluene sulphonate (14)
The lipid diol 13 (2.00 g, 6.32 mmol) was dissolved in dissolved in 20 mL DCM, cooled to 0 °C, then Et3N (1.28 g, 1.80 mL,) was added followed by 4-toluenesulphonyl chloride (1.33 g, 6.95 mmol) and DMAP (0.04 g, 0.32 mmol). The temperature was allowed to increase to room temperature (23 °C) and the mixture was stirred for 4 h. At the end of reaction, the mixture was diluted with ethyl (60.0 mL) acetate, washed with saturated aqueous ammonium chloride (3 times), brine (3 times). The organic layer was then dried over sodium sulphate, concentrated under vacuum and the residue was purified using flash chromatography using hexane/ethyl acetate (8:2) to give 14 (1.80 g, 3.80 mmol) as a white flaky solid. Yield was 60%. NMR data of 14: 1H NMR (300 MHz, chloroform-d) δ 7.78 (d, J = 8.2 Hz, 2H, aromatic protons), 7.33 (d, J = 8.1 Hz, 2H, aromatic protons), 4.11–4.00 (m, 2H, TsO-CH2), 3.99–3.89 (m, 1H, HO-CH), 3.46–3.31 (m, 4H), 2.80 (d, J = 5.4 Hz, 1H, OH), 2.42 (s, 3H, toluene-CH3), 1.55–1.41 (m, 2H), 1.25 (s, 26H, Lipid tail), 0.87 (t, J = 6.4 Hz, 3H, lipid terminal-CH3).13C-NMR (75 MHz, CDCl3) δ 144.90, 132.77, 129.88, 127.99, 71.73, 70.77, 70.56, 68.25, 31.93, 29.71, 29.68, 29.64, 29.61, 29.48, 29.37, 26.01, 22.68, 21.58, 14.11. ES-MS: calcd: C26H46NO5Na+ m/z: 493.3, found [M + Na]+ m/z: 493.7.
3-Hexadecyloxy-2R-hdroxyl propyl-1-azide (15)
Compound 14 (1.30 g, 2.76 mmol) and sodium azide (1.81 g, 27.60 mmol) were suspended in anhydrous DMF and the mixture was stirred at 90 °C for 18 h. at the end of the reaction the mixture was concentrated then diluted with ethyl acetate and filtered to remove excess sodium azide. The filtrate was then concentrated and purified with flash chromatography using hexane/ethyl acetate (9:1) to give 15 (0.85 g, 2.50 mmol) as a white wax like solid. Yield was 91%. 1H-NMR (300 MHz, Chloroform-d) δ 3.92–3.86 (m, 1H, HO-CH), 3.48–3.34 (m, 4H), 3.31 (dd, J = 5.5, 2.9 Hz, 2H, -CH2N3), 3.17 (s, 1H, OH), 1.55–1.41 (m, 2H, 1.25 (s, 26H, Lipid tail)), 0.85 (t, J = 6.6 Hz, 3H, terminal lipid-CH3).13C-NMR (75 MHz, CDCl3) δ 71.92, 71.71, 69.59, 53.54, 31.93, 29.71, 29.67, 29.61, 29.52, 29.47, 29.37, 26.05, 22.67, 14.03.ES-MS: calcd: C19H39N3O2Na+ m/z: 364.3, found [M + Na]+ m/z: 364.5.
3-Azido-1-hexadecyloxyl-2R-(2′3′4′-tri-O-acetyl-O-α-l-rhamnopyranosyl)-sn-glycerol (16)
The fully protected glycoside donor 10 (0.15 g, 0.41 mmol) and the glycoside acceptor 15 (0.12 g, 0.36 mmol) were dissolved in 15.0 mL of DCM under argon atmosphere, then AgOTf (0.02 g, 0.08 mmol) and N-iodosuccinimide (0.14 g, 0.60 mmol) were simultaneously added. The reaction was vigorously stirred for 2 h after which it was stopped with saturated solution of sodium thiosulphate (5.0 mL) and then washed with 25.0 mL of saturated sodium thiosulphate solution (1 time), saturated sodium bicarbonate (3 times), water (1 time) and brine (1 time). The organic layer was then dried over anhydrous sodium sulphate and then concentrated under vac. The residue was purified by flash chromatography using ethyl acetate/hexane mixture (4:6) to give α-anomers, 16 (0.12 g, 0.20 mmol) as a white solid. Yield was 55%. NMR data of 16: 1H-NMR (300 MHz, chloroform-d) δ 5.30 (dd, J = 10.0, 3.6 Hz, 1H, H-3), 5.25 (dd, J = 3.6, 1.7 Hz, 1H, H-2), 5.06 (dd, J = 9.8, 9.9 Hz, 1H, H-4), 4.93 (d, J = 1.7 Hz, 1H, H-1), 4.18–3.99 (m, 1H, H-5), 3.95–3.83 (m, 1H), 3.58–3.29 (m, 6H), 2.14 (s, 3H), 2.03 (s, 3H), 1.98 (s, 3H), 1.57–1.52 (m, 2H), 1.25 (broad s, 26H, lipid tail), 1.20 (d, J = 6.3 Hz, 3H, H-6), 0.87 (t, J = 6.6 Hz, 3H). 13C-NMR (75 MHz, CDCl3) δ 170.01, 169.95, 169.84, 97.22, 76.46, 71.77, 71.09, 70.48, 70.01, 68.92, 66.68, 51.68, 31.91, 29.68, 29.49, 29.34, 26.13, 20.87, 20.75, 20.67, 17.34, 14.09. ES-MS: calcd: C31H55N3O9Na+ m/z: 636.4, found [M + Na]+ m/z: 636.5.
3-Azido-1-hexadecyloxyl-2R-O-α-l-rhamnopyranosyl-sn-glycerol (17)
Compound 16 (0.12 g, 0.20 mmol) was dissolved in 15.0 mL of methanol, then catalytic amount of sodium methoxide was added and the reaction was vigorously stirred for 3 h. The reaction was stopped by acidic ion exchange resin. The resin was filtered and the filtrate was concentrated under vacuum and the residue was purified by flash chromatography using ethyl acetate/hexane mixture (9:1) to give 17 (0.08 g, 0.16 mmol) as a white solid. Yield was 79%. NMR data of 17: 1H-NMR (300 MHz, chloroform-d) δ 4.95 (d, J = 1.1, 1H, H-1), 4.19–3.95 (m, 1H, H-5), 4.03–3.85 (m, 2H), 3.77 (d, J = 8.3, 3.5 Hz, 1H, H-3), 3.62–3.27 (m, 10H), 1.58–1.54 (m, 2H), 1.32 (d, J = 6.4 Hz, 3H, H-6), 1.27 (broad s, 26H), 0.88 (d, J = 7.1 Hz, 3H). 13C-NMR (75 MHz, CDCl3) δ 100.04, 76.26, 72.70, 71.83, 71.60, 71.09, 70.33, 68.67, 51.71, 31.94, 29.73, 29.52, 29.38, 26.11, 22.70, 17.48, 14.12. ES-MS: calcd: C25H49N3O6Na+ m/z: 500.4, found [M + Na]+ m/z: 500.4.
3-Amino-1-O-hexadecyloxy-2R-(O–α-l-rhamnopyranosyl)-sn-glycerol (3)
To a solution compound 17 (0.10 g, 0.21 mmol) in THF (7.0 mL) was added 1.5 mL of water and 2.6 mL of 1 M trimethylphosphine in THF. The reaction was vigorously stirred for 2 h at room temperature after which it was concentrated under vac. The residue was purified by C-18 column using gradient elution with water/methanol to give 3 (0.06 g, 0.13 mmol) as a white solid. Yield was 61%. NMR data for 3: 1H-NMR (300 MHz, methanol-d4) δ 4.65 (d, J = 1.3 1H, H-1) 3.65 (dd, J = 1.3, 3.4 Hz, 1H, H-2), 3.48–3.56 (m, 2H), 3.45 (dd, J = 9.5, 3.4 Hz, 1H, H-3), 3.37–3.29 (m, 1H, H-5), 3.29–3.11 (m, 4H), 2.59–2.42 (m, 2H), 1.40–1.34 (m, 2H), 1.08 (broad s, 29H, H-6, lipid tail), 0.69 (t, J = 6.4 Hz, 3H, lipid terminal-CH3). 13C-NMR (75 MHz, MeOD) δ 101.91, 79.55, 73.98, 72.69, 72.66, 72.45, 72.39, 70.10, 43.50, 33.10, 30.81, 30.78, 30.66, 30.50, 27.33, 23.76, 18.08, 14.47. MALDI-HRMS: calcd: C25H51NO6Na+ m/z: 484.3614, found [M + Na]+ m/z: 484.3611.
3-(-3-(p-Hydroxyphenylpropyl)-amido-1-O-Hexadecyloxy-2R-(O-α-l-rhamnopyranosyl)-sn-glycerol (4)
To a solution of p-hydroxyphenyl propionic acid 18 (0.02 g, 0.11 mmol), TBTU (0.05 g, 0.14 mmol) and diisopropyl ethyl amine (0.02 g, 0.14 mmol) in 5.0 mL of DMF which has been stirring for 20 min was added 3 (0.05 g, 0.11 mmol). The reaction was vigorously stirred for 8 h after which it was diluted with methanol. The solvents were removed in vacuo and the residue was purified by flash chromatography using ethylacetate to give 4 (0.07 g, 0.11 mmmol) as an off white solid. Yield was 98%. NMR data of 4: 1H-NMR (300 MHz, methanol-d4) δ 6.94 (d, J = 8.3 Hz, 2H, aromatic proton), 6.62 (d, J = 8.3 Hz, 2H, aromatic proton), 4.72 (d, J = 1.9 Hz, 1H, H-1), 3.80–3.62 (m, 2H), 3.55 (dd, J = 9.8, 5.7 Hz, 1H), 3.41–3.21 (m, 7H), 3.16 (dd, J = 13.8, 5.6 Hz, 1H), 2.73 (t, J = 7.5 Hz, 2H, propionamide CH2), 2.36 (t, J = 7.7 Hz, 2H, propionamide CH2), 1.49–1.41 (m, 2H), 1.21 (broad s, 26H, lipid tail), 1.16 (d, J = 6.2 Hz, 3H, H-6), 0.82 (t, J = 6.4 Hz, 3H, lipid terminal CH3). 13C-NMR (75 MHz, MeOD) δ 175.67, 156.96, 132.79, 130.30, 116.30, 101.26, 76.32, 74.02, 72.67, 72.53, 72.34, 70.00, 49.89, 48.18, 40.92, 39.32, 33.10, 32.20, 30.82, 30.70, 30.50, 27.32, 23.76, 18.09, 14.48. MALDI-HRMS: calcd: C34H59NO7Na+ m/z: 632.4138, found [M + Na]+ m/z: 632.4590.
α/β-l-Glucopyranosyl-1,2,3,4,5-pentaacetate (19)
l-Glucose (0.90 g, 5.00 mmol) was dissolved in 20.0 mL pyridine at room temperature, then acetic anhydride (5.20 mL, 54.90 mmol) and dimethyl amino pyridine (0.10 g,) were sequentially added and the reaction was vigorously stirred for 18 h after which it was stopped by addition of methanol (10.0 mL) and then stirred for 15 min. The solvents were removed under high vac. The resulting residue was then dissolved in ethyl acetate (50.0 mL) and washed with 3% HCl solution (1 time), saturated sodium bicarbonate (2 times), distilled water (1 time) and brine (1 time). The resulting organic layer was dried over Na2SO4 and concentrated to dryness and purified by flash chromatography using ethyl acetate and hexane (1:1) to give 19 (1.70 g, 4.40 mmol) as α, β mixture (3:2). Yield was 88%. Characteristic proton NMR data for 19: 1H-NMR (300 MHz, chloroform-d) δ 6.35 (d, J = 3.7 Hz, 3H, α-H-1), 5.73 (d, J = 8.2 Hz, 2H, β-H-1). ES-MS: calcd: C16H22O11Na+ m/z: 413.1, found [M + Na]+ m/z: 413.4.
Phenyl-2,3,4,6-tetra-O-acetyl-1-thio-β-l-glucopyranoside (20)
The pentaaacetate 19 (1.70 g, 4.40 mmol) was dissolved in in 20.0 mL DCM, then thiophenol (0.68 g, 6.14 mmol) and BF3·Et2O (0.87 g, 6.14 mmol) were sequentially added. The reaction was stirred vigorously for 18 h after which it was stopped with 20.0 mL saturated sodium bicarbonate at 0 °C. The organic layer was separated using separatory funnel and subsequently washed with saturated 20.0 mL of sodium bicarbonate (2 times), 20.0 mL of water (1 time) and 20.0 mL of brine (1 time). The organic layer was dried over anhydrous sodium bicarbonate and then concentrated in vacuo. The residue was then partially purified by flash chromatography using ethyl acetate and hexane (4:6) to give mainly β-anomer of 20 (1.72 g, 4.50 mmol). Yield was 88%. Compound 20 was not characterised.
3-Azido-1-hexadecyloxyl-2R-(2′3′4′6′-tetra-O-acetyl-O-β-l-glucopyranosyl)-sn-glycerol (21)
The fully protected glycoside donor 20 (0.18 g, 0.40 mmol) and the glycoside acceptor 15 (0.15 g, 0.44 mmol) were dissolved in 15.0 mL of DCM under argon atmosphere, then AgOTf (0.02 g, 0.08 mmol) and N-iodosuccinimide (0.18 g, 0.80 mmol) were simultaneously added. The reaction was vigorously stirred for 2 h after which it was stopped with saturated solution of sodium thiosulphate (5.0 mL) and then washed with 25.0 mL of saturated sodium thiosulphate solution (1 time), saturated sodium bicarbonate (3 times), water (1 time) and brine (1 time). The organic layer was then dried over anhydrous sodium sulphate and then concentrated under vac. The residue was purified by flash chromatography using ethyl acetate/hexane mixture (4:6) to give 21 (0.13g, 0.20 mmol) as a white solid. Yield was 50%. 1H-NMR (300 MHz, chloroform-d) δ 5.22 (dd, J = 9.4, 9.4 Hz, 1H, H-4), 5.10 (dd, J = 9.6, 9.6 Hz, 1H, H-3), 4.97 (dd, J = 9.6, 7.9 Hz 1H, H-2), 4.75 (d, J = 7.9 Hz, 1H, H-1), 4.25–4.18 (m, 2H), 4.02–3.90 (m, 1H), 3.78–3.69 (m, 1H), 3.53–3.23 (m, 6H), 2.10 (s, 3H), 2.05 (s, 3H), 2.04 (s, 3H), 2.02 (s, 3H), 1.59–1.52 (m, 2H), 1.27 (broad singlet, 26H, Lipid tail), 0.89 (h, J = 6.1 Hz, 3H, Lipid terminal-CH3). 13C-NMR (75 MHz, CDCl3) δ 170.65, 170.29, 169.37, 169.17, 100.44, 77.64, 72.83, 71.93, 71.85, 71.47, 70.58, 68.47, 61.90, 52.06, 31.93, 29.70, 29.66, 29.61, 29.49, 29.36, 26.12, 22.70, 20.72, 20.62, 14.12. ES-MS: calcd: C33H57N3O11Na+ m/z: 694.4, found [M + Na]+ m/z: 694.8.
3-Azido-1-hexadecyloxyl-2R-O-β-l-glucopyranosyl-sn-glycerol (22)
Compound 21 (0.13 g, 0.20 mmol) was dissolved in 15.0 mL of methanol, then the catalytic amount of sodium methoxide was added and the reaction was vigorously stirred for 3 h. The reaction was stopped by acidic ion exchange resin. The resin was filtered and the filtrate was concentrated under vacuum and the residue was dissolved in ethyl acetate and filtered through a pad of silica gel to give 22 (0.09 g, 0.17 mmol) as a white solid. Yield was 84%. Compound 22 was not characterised. ES-MS: calcd: C25H49N3O7Na+ m/z: 526.4, found [M + Na]+ m/z: 526.5.
3-Amino-1-hexadecyloxyl-2R-O-β-l-glucopyranosyl-sn-glycerol (5)
To a solution of compound 22 (0.09 g, 0.17 mmol) in THF (7.0 mL) was added 1.5.0 mL of water and 2.6 mL of 1 M trimethylphosphine in THF. The reaction was vigorously stirred for 2 h at room temperature after which it was concentrated under vac. The residue was purified by C-18 column using gradient elution with water/methanol to give 5 (0.06 g, 0.09 mmol) as a white solid. Yield was 55%. NMR data for 5: 1H-NMR (300 MHz, methanol-d4) δ 4.35 (d, J = 7.7, Hz, 1H, H-1), 3.81 (dd, J = 13.7, 3.6 Hz, 2H, -CH-CH2O-), 3.69–3.36 (m, 6H), 3.34–3.07 (m, 4H), 1.59–1.38 (m, 3H), 1.22 (broad s, 26H, Lipid tail), 0.85 (t, J = 7.3, 3H, Lipid terminal-CH3). 13C-NMR (75 MHz, MeOD) δ 103.87, 79.65, 78.17, 77.96, 75.13, 72.76, 72.35, 71.66, 62.80, 43.87, 33.09, 30.81, 30.78, 30.49, 27.26, 23.75, 14.46. MALDI-HRMS: calcd: C25H51NO7Na+ m/z: 500.3563, found [M + Na]+ m/z: 500.3740.
1,2,3,4,6-Pentaacetyl α/β-l-mannopyranoside (23)
l-Mannose (2.00 g, 11.10 mmol), was dissolved in pyridine (40.0 mL), then acetic anhydride (11.00 mL, 111.00 mmol) was added followed by dimethyl amino pyridine (DMAP, 0.27 g 2.20 mmol). The mixture was stirred vigorously for 18 h at room temperature and it was stopped by addition of methanol (10.0 mL) and then stirred for 15 min. The solvents were removed under high vac. The resulting residue was then dissolved in ethyl acetate (50.0 mL) and washed with 3% HCl solution (1 time), saturated sodium bicarbonate (2 times), distilled water (1 time) and brine (1 time). The resulting organic layer was dried over Na2SO4 and concentrated to dryness and purified by flash chromatography using ethyl acetate and hexane (1:1) to give 23 (3.70 g, 9.48 mmol) as α, β mixture (4:1). Yield was 85%. NMR data for α- anomer of compound 23: 1H-NMR (300 MHz, chloroform-d) δ 5.94 (d, J = 1.9 Hz, 1H, H-1), 5.24–5.06 (m, 3H, H-2), 4.14 (dd, J = 12.7, 4.9 Hz, 1H, H-6a), 4.05–3.85 (m, 2H, H-5, H-6b), 2.09 (s, 3H), 2.01 (s, 3H), 1.96 (s, 3H), 1.92 (s, 3H), 1.82 (s, 3H). 13C-NMR (75 MHz, CDCl3) δ 170.34, 169.73, 169.50, 169.34, 167.88, 90.44, 70.45, 68.63, 68.20, 65.39, 61.94, 20.62, 20.53, 20.48, 20.44, 20.41. ES-MS: calcd: C16H22O11Na+ m/z: 414.1, found [M + Na]+ m/z: 414.5.
Phenyl-2,3,4,6-tetra-O-acetyl-1-thio-α-l-mannopyranoside (24)
The pentaaacetate
23 (1.50 g, 3.35 mmol) was dissolved in in 30.0 mL DCM, then thiophenol (1.30 g, 11.50 mmol) and BF
3·Et
2O (1.60 g, 11.50 mmol) were sequentially added. The reaction was stirred vigorously for 18 h after which it was stopped with 30 mL saturated sodium bicarbonate at 0 °C. The organic layer was separated using separatory funnel and subsequently washed with saturated 35.0 mL of sodium bicarbonate (2 times), 30.0 mL of water (1 time) and 30.0 mL of brine (1 time). The organic layer was dried over anhydrous sodium bicarbonate and then concentrated in vacuo. The residue was then purified by flash chromatography using ethyl acetate and hexane (4:6) to give mainly α-anomer of
24 (0.99 g, 2.35 mmol). Yield was 70%. NMR data of compound
24 is similar to previously reported data [
6]. ES-MS: calcd: C
20H
24O
9Na
+ m/
z: 463.1, found [M + Na]
+ m/
z: 462.9.
Phenyl-1-thio-α-l-mannopyranoside (25)
Compound 24 (1.00 g, 2.35 mmol) was dissolved in 15.0 mL of methanol, then catalytic amount of sodium methoxide was added and the reaction was vigorously stirred for 3 h. The reaction was stopped by acidic ion exchange resin. The resin was filtered and the filtrate was concentrated under vacuum and the residue was dissolved in ethyl acetate and filtered again through a pad of silica gel to give 25 (0.58 g, 2.14 mmol) as a white solid. Yield was 91%. This compound was used without further purification and characterization for the next step.
Phenyl-6-tosyl-1-thio-α-l-mannopyranoside (26)
Compound 25 (1.31 g, 4.80 mmol) was dissolved in dissolved in 20.0 mL pyridine, cooled to 0 °C, then toluenesulphonychloride (1.06 g, 5.54 mmol) and DMAP (0.05 g, 0.41 mmol) were added. The temperature was allowed to increase to room temperature and the mixture was stirred for 18 h. At the end of reaction, the mixture was diluted with methanol after which the solvents were removed in vacuo. The residue was diluted with 40.0 mL ethyl acetate and the washed sodium bicarbonate solution (3 times), brine (3 times). The organic layer was then dried over sodium sulphate and then concentrated under vacuum and the residue was partially purified by flash chromatography using ethyl acetate (100%) to give 26 (1.81 g, 4.24 mmol) as a white solid. Yield was 88%. 26 was not characterized using NMR. ES-MS: calcd: C19H22O7S2Na+ m/z: 449.1, found [M + Na]+ m/z: 449.5.
Phenyl-6-azido-1-thio-α-l-mannopyranoside (27)
Compound 26 (1.81 g, 4.24 mmol) and sodium azide (1.80 g, 27.60 mmol) were suspended in anhydrous DMF and the mixture was stirred at 90 °C for 18 h. at the end of the reaction the mixture was concentrated then diluted with ethyl acetate and filtered to remove excess sodium azide. The filtrate was then concentrated and partially purified with flash chromatography using hexane/ethyl acetate (1:9) to give 27 (1.20 g, 4.04 mmol) as a white solid. Yield was 95%. ES-MS: calcd: C12H15N3O4SNa+ m/z: 320.1, found [M + Na]+ m/z: 320.3
Phenyl-2,3,4-tri-O-acetyl-6-azido-1-thio-α-l-mannopyranoside (28)
Compound 27 (1.20 g, 4.04 mmol) was dissolved in pyridine (50.0 mL), then acetic anhydride (2.00 mL, 20.00 mmol) was added followed by dimethyl amino pyridine (DMAP, 0.05 g, 0.41 mmol). The mixture was stirred vigorously for 18 h at room temperature and it was stopped by addition of methanol (10.0 mL) and then stirred for 15 min. The solvents were removed under high vac. The resulting residue was then dissolved in ethyl acetate (50.0 mL) and washed with 3% HCl solution (1 time), saturated sodium bicarbonate (2 times), distilled water (1 time) and brine (1 time). The resulting organic layer was dried over Na2SO4 and concentrated to dryness and purified by flash chromatography using ethyl acetate and hexane (1:1) to give 28 (1.31 g, 3.10 mmol) white solid. Yield was 76%. NMR data of compound 28: 1H-NMR (300 MHz, chloroform-d) δ 7.54–7.10 (m, H, aromatic protons), 5.54–5.37 (m, 2H, H-1, H-3), 5.32–5.19 (m, 2H, H-2, H-4), 4.43–4.38 (m, 1H, H-5), 3.41–3.17 (m, 2H, H-6), 2.07 (s, 3H), 2.03 (s, 3H), 1.90 (s, 3H). 13C-NMR (75 MHz, CDCl3) δ 169.72, 169.64, 132.49, 132.01, 129.27, 128.12, 85.64, 71.01, 70.81, 69.18, 67.14, 50.98, 20.69, 20.58, 20.50. ES-MS: calcd: C18H21N3O7SNa+ m/z: 446.1, found [M + Na]+ m/z: 446.4.
3-Azido-1-hexadecyloxyl-2R-(6′-azido-2′3′4′-tri-O-acetyl-O-α-l-mannopyranosyl)-sn-glycerol (29)
The fully protected glycoside donor 28 (0.20 g, 0.47 mmol) and the glycoside acceptor 15 (0.18 g, 0.52 mmol) were dissolved in 15.0 mL of DCM under argon atmosphere, then AgOTf (0.02 g, 0.09 mmol) and N-iodosuccinimide (0.16g, 0.71 mmol) were simultaneously added. The reaction was vigorously stirred for 2 h after which it was stopped with saturated solution of sodium thiosulphate (5.0 mL) and then washed with 25.0 mL of saturated sodium thiosulphate solution (1 time), saturated sodium bicarbonate (3 times), water (1 time) and brine (1 time). The organic layer was then dried over anhydrous sodium sulphate and then concentrated under vac. The residue was purified by flash chromatography using ethyl acetate/hexane mixture (4:6) to give 29 (0.220 g, 0.34 mmol) as a white solid. Yield was 71%. NMR data of 29: 1H-NMR (300 MHz, chloroform-d) δ 5.38 (dd, J = 9.9, 3.3 Hz, 1H, H-3), 5.32–5.20 (m, 2H, H-2, H-4), 5.06 (d, J = 1.8 Hz, 1H, H-1), 4.20 (ddd, J = 9.5, 5.6, 3.4 Hz, 1H, H-5), 4.07–3.89 (m, 1H), 3.64–3.23 (m, 8H, H-6), 2.18 (s, 3H), 2.06 (s, 3H), 2.01 (s, 3H), 1.61–1.54 (m, 2H), 1.27 (broad s, 26H, lipid tail), 0.89 (t, J = 6.5 Hz, 3H, lipid terminal-CH3). 13C-NMR (75 MHz, CDCl3) δ 170.01, 169.81, 97.13, 76.84, 71.80, 70.35, 70.23, 69.69, 68.66, 67.20, 51.76, 51.18, 31.93, 29.70, 29.64, 29.52, 29.37, 26.15, 22.70, 20.88, 20.72, 14.12. ES-MS: calcd: C31H54N6O9Na+ m/z: 677.4, found [M + Na]+ m/z: 677.8.
3-Azido-1-hexadecyloxyl-2R-(6′-azido-O-α-l-mannopyranosyl)-sn-glycerol (30)
Compound 29 (0.22 g, 0.34 mmol) was dissolved in 15.0 mL of methanol, then catalytic amount of sodium methoxide (0.05 g) was added and the reaction was vigorously stirred for 3 h. The reaction was stopped by acidic ion exchange resin. The resin was filtered and the filtrate was concentrated under vacuum and the residue was purified by flash chromatography using ethyl acetate/hexane mixture (9:1) to give 30 (0.120 g, 0.23 mmol) as a white solid. Yield was 68%. NMR data of 30: 1H- NMR (300 MHz, methanol-d4) δ 5.02 (d, J = 1.9 Hz, 1H, H-1), 4.10–3.89 (m, 2H, H-3), 3.96–3.81 (m, 2H, H-2), 3.78–3.57 (m, 3H), 3.56–3.28 (m, 6H), 1.62–1.58 (m, 2H), 1.33 (broad s, 26H, lipid tail), 0.91 (t, J = 6.6 Hz, 3H, lipid terminal-CH3). 13C-NMR (75 MHz, MeOD) δ 101.93, 77.92, 74.29, 72.72, 72.18, 72.15, 71.65, 69.45, 53.23, 52.92, 33.16, 30.89, 30.79, 30.57, 27.33, 23.82, 14.59. ES-MS: calcd: C25H48N6O6Na+ m/z: 528.4, found [M + Na]+ m/z: 528.7.
3-Amino-1-hexadecyloxyl-2R-(6′-amino-6′deoxy-O-α-l-mannopyranosyl)-sn-glycerol (6)
To a solution of compound 30 (0.12 g, 0.23 mmol) in THF (7.0 mL) was added 1.5 mL of water and 2.6 mL of 1 M trimethylphosphine in THF. The reaction was vigorously stirred for 2 h at room temperature after which it was concentrated under vacuum. The residue was purified by C-18 column using gradient elution with water/methanol to give 6 (0.07 g, 0.14 mmol) as a white solid. Yield was 62%. NMR data for 6: 1H-NMR (300 MHz, methanol-d4) δ 4.83 (d, J = 2.0 Hz, 1H, H-1), 3.79 (dd, J = 5.0, 2.0 Hz, 1H, H-2), 3.71–3.62 (m, 2H), 3.58–3.43 (m, 3H, H-5), 3.38–3.17 (m, 4H), 2.94–2.82 (m, 1H), 2.83–2.60 (m, 2H, H-6), 1.59–1.38 (m, 2H), 1.21 (broad s, 26H, lipid tail), 0.83 (t, J = 6.6 Hz, 3H, lipid terminal-CH3). 13C-NMR (75 MHz, MeOD) δ 101.52, 79.00, 74.36, 72.75, 72.70, 72.44, 72.34, 69.51, 43.45, 43.26, 33.12, 30.84, 30.70, 30.52, 27.37, 23.78, 14.51. MALDI-HRMS: calcd: C25H52N2O6Na+ m/z: 499.3723, found [M+Na]+ m/z: 499.3409.