Antibacterial Properties of Peptide and Protein Fractions from Cornu aspersum Mucus
Abstract
:1. Introduction
2. Results
2.1. Preparation of Snail Mucus Extracts
2.2. Analysis and Characteristics of the Isolated Mucus Fraction with an MW < 20 kDa
2.2.1. Molecular Mass Analysis and De Novo Sequencing of Peptides by Mass Spectrometry
2.2.2. Characterization of the Mucus Extract Fraction with an MW > 20 kDa via Electrophoretic and MALDI-Tof-MS Analyses
2.2.3. Identification of Bioactive Compounds in the Mucus Extract Fraction with an MW > 20 kDa from C. aspersum Snails
2.2.4. Characterization of the Mucus Fraction with an MW > 20 kDa by Tandem Mass Spectrometrical Analyses of 12% SDS-PAGE
2.3. Antimicrobial Effect of Two Fractions Isolated from C. aspersum Mucus
2.4. Studying the In Vitro and In Vivo Effects of Snail Mucus on Eukaryotic Cells
3. Discussion
4. Materials and Methods
4.1. Preparation of Mucus Extract
4.2. HPLC Purification of Peptides from the Fraction below 20 kDa
4.3. Molecular Mass Analysis and De Novo Sequencing of Peptides by Mass Spectrometry
4.4. Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis (SDS-PAGE)
4.5. Image Analysis of 10% SDS-PAGE by ImageQuant™ TL v8.2.0 Software
4.6. Tryptic In-Gel Digestion and Peptide Extraction
4.7. Antibacterial Activity Assay
Bacteria Strain | Causative Agents |
Bacillus cereus NBIMCC 1085 | Foodborne disease |
Propionibacterium acnes DSM 1897 | Skin condition of acne, chronic endophthalmitis, corneal ulcers, sarcoidosis, etc. |
Salmonella enterica NBIMCC 8691 | Salmonellosis |
Enterococcus faecalis NBIMCC 3915 | Endocarditis, sepsis, urinary tract infections (UTIs), meningitis, etc. |
Enterococcus faecium NBIMMCC 8754 | Bloodstream infections, urinary tract infections (UTIs), and wound infections associated with catheters or surgery are the most common infections |
4.8. In Vivo and In Vitro Effect on Eukaryotic Cell
4.8.1. Cell Treatment and Viability Assay
4.8.2. Measurement of the Mucus Cytotoxic Effect
4.8.3. Determination of Cytoprotective Effect
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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No | Amino Acid Sequence of Peptides | [M+H]+ Da | Calcul. Monois. Mass Da | pI | GRAVY | Net Charge | Predicted by iAMPpred Software http://cabgrid.res.in:8080/amppred (accessed on 25 April 2024) | ||
---|---|---|---|---|---|---|---|---|---|
Antibacterial (%) | Antiviral (%) | Antifungal (%) | |||||||
1 | LLPFKEPDL | 1071.60 | 1070.60 | 4.37 | −0.600 | −2/+1 | 28 | 51 | 19 |
2 | ACGATLQLENCG | 1179.77 | 1178.51 | 4.00 | +0.350 | −1/0 | 29.3 | 35.7 | 43.7 |
3 | LNLGGNGANGLVGG | 1212.76 | 1211.63 | 5.52 | +0.321 | 0/0 | 74.0 | 43.1 | 74.3 |
4 | AGVGGAAGNPSTYVG | 1277.70 | 1276.60 | 5.57 | +0.260 | 0/0 | 25.1 | 7.4 | 11.3 |
5 | GGGMVKEDGSCLGV | 1308.77 | 1307.58 | 4.37 | +0.207 | −2/+1 | 40.4 | 31.4 | 33.7 |
6 a | MLGGGVNSLRPPK | 1325.80 | 1324.73 | 11.0 | −0.262 | 0/+2 | 22.8 | 14.0 | 8.9 |
7 | CVGGAGGHGDSCAKGT | 1376.53 | 1375.56 | 6.73 | −0.106 | −1/+1 | 85.2 | 48.8 | 74.4 |
8 | GGGGYHTWGEGGKF | 1409.48 | 1408.62 | 6.75 | −0.964 | −1/+1 | 69.0 | 62.8 | 72.6 |
9 | MLNVAVNKGEVKH | 1438.86 | 1437.78 | 8.37 | −0.138 | −1/+2 | 56.4 | 38.0 | 19.7 |
10 b | NLVGGSGGGGRGGANPLG | 1496.79 | 1495.75 | 9.75 | −0.217 | 0/+1 | 66.0 | 33.7 | 48.2 |
11 | GTMSPAGGEMGPVTAGVG | 1576.04 | 1574.71 | 4.00 | +0.250 | −1/0 | 13.1 | 24.8 | 8.3 |
12 | GTKGCGPGSCPPGDTVAGVG | 1716.79 | 1715.76 | 5.82 | −0.100 | −1/+1 | 23.8 | 20.2 | 25.8 |
13 c | ACSLLLGGGGVGGGKGGGGHAG | 1738.96 | 1737.86 | 8.27 | +0.409 | 0/+1 | 82.6 | 49.5 | 67.0 |
14 a | LLLDGFGGGLLVEHDPGS | 1796.00 | 1794.92 | 4.02 | +0.439 | −3/0 | 37 | 45 | 10 |
15 d | MGGWGGLGGGHNGGWMPPK | 1852.96 | 1851.83 | 8.52 | −0.611 | 0/+1 | 69 | 56.0 | 57.0 |
16 c | ACLTPVDHFFAGMPCGGGP | 1876.88 | 1875.81 | 5.08 | +0.542 | −1/0 | 32.4 | 42.6 | 20.1 |
17 c | NGLFGGLGGGGHGGGGKGPGEGGG | 1909.98 | 1908.88 | 6.75 | −0.487 | −1/+1 | 89.5 | 67.2 | 79.5 |
18 | LLLDNKGGGLVGGLLGGGGKGGG | 1966.11 | 1965.10 | 8.59 | +0.322 | −1/+2 | 93 | 56 | 81 |
19 | GMVLLHCSPALDFHKTPAV | 2036.09 | 2035.04 | 6.91 | +0.616 | −1/+1 | 18 | 53 | 14 |
20 | LPFLLGVGGLLGGSVGGGGGGGGAPL | 2136.24 | 2135.17 | 5.52 | +1.023 | 0/0 | 66 | 33 | 36 |
21 | MVLDGKGGGGLLGGVLGGGKDAHLGG | 2292.32 | 2291.21 | 6.50 | +0.319 | −2/+2 | 84.3 | 59.0 | 71 |
22 | LLKDNGVGGLLGGGGAGGGGLVGGNLGGGAG | 2478.39 | 2477.30 | 5.84 | +0.439 | −1/+1 | 86.4 | 54 | 66 |
23 | KTSKLMVYLAGGGGGLLGGVGGGGGGAGGGGP GGL | 2843.76 | 2842.48 | 9.70 | +0.374 | 0/+2 | 76 | 47 | 67 |
Band kDa | AAS of Peptide | Mass Exp. [M+H]+ | Protein Name | UniProt ID | Identities |
---|---|---|---|---|---|
17.5 | TAAFTEDTSVVTGR | 1454.63 | Mucus protein [Cornu aspersum] | QEG59314.1 | 86%, E = 8 × 10−5 |
FTAAFTEDTSVAEGR | 1601.74 | Mucus protein [C. aspersum] | QEG59314.1 | 100%, E = 2 × 10−9 | |
GNVAFTAAFTEDTSVAEGR | 1942.91 | Mucus protein [C. aspersum] | QEG59314.1 | 100%, E = 4 × 10−13 | |
GALNGNVAFTAAFTEDTSVAEGR | 2298.10 | Mucus protein [C. aspersum] | QEG59314.1 | 100%, E = 2 × 10−11 | |
23.6 | GSCNWPMTILMLESLR | 1850.90 | NADH subunit 6 [Albinaria caerulea] | P48922 | 78%, E = 0.005 |
QYLQITWPSPR | 1388.7 | H-type lectin domain-cont. protein B. glabrata | KAI8776186.1 | 100%, E = 0.041 | |
26.7 | VPSDDPGR | 842.40 | Chain A, H. aspersa agglutinin [C. aspersum] | 4Q56_A | 100%, E = 0.003 |
DITFASPYCR | 1172.54 | Chain A, H. aspersa agglutinin C. aspersum | 4Q56_A | 90%, E = 1 × 10−4 | |
NGGLVHPGPR | 1003.54 | Uncharacterized protein [Pomacea canaliculata] | XP_025078819.1 | 89%, E = 4.5 | |
31.35 | DWTLYVNTPLAPAR | 1616.84 | Unnamed protein, partial [C. unifasciata] mucin 18b [Plakobranchus ocellatus] | CAG5130849.1 GFO09821.1 | 78%, E = 0.33 75%, E = 2.7 |
FCPNAQRTR | 1092.54 | Glutathione S-transferase omega-1-like [P. canaliculata] Glutathione S-transferase omega-1 [Elysia marginata] | XP_025114871.1 GFR70608.1 | 89%, E = 0.31 89%, E = 0.31 | |
NPVGSVPVLELDGK | 1423.78 | Glutathione S-transferase omega-1 [P. canaliculata] Glutathione S-transferase omega-1-like [B.glabrata] | XP_025099831.1 KAI8762368.1 | 86%, E = 0.013 79%, E = 0.026 | |
33.0 | GPCFTPHTYTNWSWLR | 1965.91 | Unnamed protein [Candidula unifasciata] “Bacterial protein of unknown function” (HtrL_YibB) | CAG5121511.1 | 63%, E = 4 × 10−4 |
DFLPPASLPDFAPSPPRVAER | 2279.18 | Unnamed protein product [C. unifasciata] | CAG5136685.1 | 53%, E = 0.34 | |
39.1 | AGYLQITWPSPR | 1388.72 | Mucus protein [C. aspersum] H-type lectin domain [Biomphalaria glabrata] | QEG59312.1 KAI8776186.1 | 100%, E = 1 × 10−8 100% E = 0.055 |
ASVTGDLSNK | 991.51 | Mucus protein [C. aspersum] | QEG59312.1 | 100%, E = 8 × 10−4 | |
ELLGNVYRAAFTEDTSVAEGR | 2298.14 | Mucus protein [C. aspersum] | QEG59314.1 | 77%, E = 3 × 10−8 | |
VGSNGAR | 660.34 | Mucus protein [C. aspersum] | QEG59312.1 | 100%, E = 0.004 | |
LPLYEDPKLDVSSLR | 1744.83 | Uncharacterized protein LOC101853718 [A. californica] | XP_012941625.1 | 83%, E = 0.27 | |
48.7 | FDANPFFSGR | 1157.59 | Hemocyanin, βC chain unit D [Helix pomatia] | P12031.2 | 89%, E = 9 × 10−6 |
HGSPIGVPYWDWTR | 1670.93 | Hemocyanin α N [C. aspersum] | AYO86684.1 | 100%, E = 2 × 10−9 | |
LISEATYFNSR | 1300.71 | Hemocyanin β [C. aspersum] βC chain unit D [H. pomatia] | AYO86685.1, P12031.2 | 100%, E = 2 × 10−4 82%, E = 6 × 10−5 | |
FDPNPFFSGR | 1183.5 | Hemocyanin, βC chain unit D [H. pomatia] | P12031.2 | 100%, E = 3 × 10−7 | |
EVFEQVEHALLAR | 1540.81 | Hemocyanin β [C. aspersum] Hemocyanin βC chain unit D [H. pomatia] | AYO86685.1 P12031.2 | 100%, E = 0.006 88%, E = 0.050 | |
QYLQITWSPPR | 1388.73 | Fibrinogen-like protein A isoform [B. glabrata] | XP_055864456.1 | 78%, E = 1.4 | |
52.8 | TDVTSALLGARCNEGGTNTHSPLR | 2470.21 | Unnamed protein, partial [C. unifasciata] Unnamed protein C. unifasciata | CAG5131631.1 CAG5131621.1 | 70%, E = 0.006 63%, E = 0.26 |
LTQHFNVGSNGAR | 1400.70 | Mucus protein [C. aspersum] Unnamed protein [C. unifasciata] Unnamed protein partial [C. unifasciata] | QEG59312.1 CAG5131621.1 CAG5131631.1 | 92%, E = 0.001 77%, E = 0.094 75%, E= 0.38 | |
MPDYDCGCCNGSNGSYGSGGGGGGGR | 2384.84 | Unnamed protein, partial [C.unifasciata] Unnamed protein product [C. unifasciata] | CAG5126455.1 CAG5131834.1 | 80%, E = 0.23 63% E = 0.23 | |
56.9 | DGMSAAPQAENAFALK | 1620.77 | Achacin; flags: precursor [L. fulica] L-amino-acid oxidase (Escapin) [A. californica] | P35903.1 Q6IWZ0.1 | 71%, E = 3 × 10−4 63%, E = 0.95 |
SGFPTTSKDR | 1095.54 | L-amino-acid oxidase (Escapin) [A. californica] | Q6IWZ0.1 | 100%, E = 0.080 | |
VGGGPSGVELDEFEARVELK | 2088.0 | Achacin; flags: precursor [Lissachatina fulica] | P35903.1 | 41% E = 0.40 | |
AELKGDMQYTYADSEKVR | 2104.00 | Fibrillin-3, partial [Biomphalaria pfeifferi] Fibrillin-3, partial [B. glabrata] | KAK0048148.1 KAK6970092.1 | 48%, E = 0.22 48%, E = 0.22 | |
70.8 | AKVQVIGVPDDRLLLR | 1792.08 | Acyl-CoA synthetase family member 2, mitochondrial-like, partial [Pomacea canaliculata] Unnamed protein product [C. unifasciata] | XP_025086706.1 CAG5136482 | 91%, E = 0.005 91%, E = 0.005 |
HGGGGGGFGGGGFGSR | 1320.65 | Uncharacterized protein LOC124113905 [H. rufescens] Fibroin heavy-chain isoform X1 [A. californica] Elastin-like [Ostrea edulis] Glycine, alanine asparagine-rich protein [Haliotis asinina] | XP_046330350.2 XP_012943828.1 XP_056017499.1 P86732.1 | 100%, E = 9 × 10−4 81%, E = 0.018 87%, E = 0.038 65%, E = 0.004 | |
84.7 | YVLEDLSAADLELSR | 1693.86 | FMRFamide-activated amiloride-sensitive sodium channel [C. aspersum] | Q25011.1 | 100%, E = 0.14 |
GSSVSLCVWDWAVLPR | 1774.8 | FMRFamide-activated amiloride-sensitive sodium channel [C. aspersum] | Q25011.1 | 71%, E = 1.9 | |
97.0 | MVTSLYPGEDWAMLPR | 1865.89 | Mucin-5AC-like, partial [Haliotis rufescens] | XP_048239711.1 | 56%, E = 0.15 |
ETVSPGYSEGECTCASITQK | 2089.91 | Mucin-5B-like isoform X4 [H. rubra] | XP_046552239.1 | 62%, E = 6.7 | |
VFADFELHNIGASADVR | 1860.92 | Hemocyanin β [C. aspersum] | AYO86685.1 | 100%, E = 2 × 10−10 | |
CQVSLPYWDWAVPLR | 1832.92 | Hemocyanin, βC chain unit G [H. pomatia] | P56823.1 | 100%, E = 5 × 10−4 | |
LSGYDVSKVNEILK | 1564.86 | Hemocyanin β [C. aspersum] | AYO86685.1 | 85%, E = 8 × 10−5 | |
HLWLLHCFEHDLNGYEYDNLR | 2687.25 | Hemocyanin β [C. aspersum] | AYO86685.1 | 87% E = 8 × 10−6 | |
ANNARLTDASHDNPFSSYTLR | 2350.12 | Hemocyanin β [C. aspersum] | AYO86685.1 | 94%, E = 1 × 10−9 | |
143.3 | VGRIESESYVVKKSK | 1708.96 | Zinc finger protein 502-like [B. glabrata] Zinc finger protein 184 [B. glabrata] | XP_055863608 KAI8795828.1 | 77%, E = 0.12 77%, E = 0.12 |
VLTFYQSCDCVVDHCHR | 2024.88 | Zinc finger protein 664-like [Patella vulgata] | XP_050401404.1 | 75%, E = 1.5 | |
GEPGSTGPPGLK | 1096.56 | Collagen alpha-1(IV) chain-like, partial [P. canaliculata] | XP_025114158.1 | 100%, E = 2 × 10−4 | |
NGPSGVELDEFEARVELK | 1988.99 | Collagen alpha-1(XIII) chain-like isoform X7 [H. rubra] | XP_046573418.1 | 59%, E = 2.5 | |
FVDMDGMFSSAAGGRPEAR | 2000.89 | Collagen α-4(VI) chain-like X2 [P. acuta] Collagen α-1(XII) chain-like [P. acuta] Collagen α-1(XII) chain-like isoform X6 [B. glabrata] | XP_059154404.1 XP_059163536.1 XP_055860588.1 | 73%, E = 0.012 75%, E = 0.26 68%, E = 0.26 | |
RAYTDGMFSSAAGGRPEAR | 1999.94 | Collagen α-4(VI) chain-like isoform [P. acuta] Collagen α-4(VI) chain-like isoform [P. acuta] | XP_059154404.1 XP_059154396.1 | 79%, E = 0.031 79%, E = 0.031 | |
CNEGGTNTHSPLR | 1385.62 | Collagen α-6(VI) chain-like [Physella acuta] | XP_059164377.1 | 89%, E = 6.1 | |
198.31 | NPGYLVSKVNEILK | 1573.89 | Mucin-2-like [P. acuta] Serine/arginine repetitive matrix protein 2 [B. glabrata] | XP_059140993.1 KAI8735946.1 | 71%, E = 0.84 71%, E = 0.84 |
DCRVRVGGPLFAPSPYLFER | 2279.1 | Mucin-17-like [Haliotis rubra] | XP_046554219.1 | 52%, E = 0.78 | |
FNFLPLSADALESLR | 1692.90 | E3 ubiquitin-protein ligase HERC2-like isoform X2 [B. glabrata] | XP_055894969.1 | 83%, E = 0.50 | |
ASSGSCDFSSSTAANR | 1547.64 | Mucin-5AC-like isoform X2 [H. rufescens] Mucin-5AC-like isoform X1 [H. rufescens] | XP_048252836.1 XP_048252834.1 | 85%, E = 0.45 85%, E = 0.45 | |
GCAGCPQAGSK | 978.41 | Fibrillin-1-like [B. glabrata] | XP_055888733.1 | 89%, E = 2.9 |
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Velkova, L.; Dolashki, A.; Petrova, V.; Pisareva, E.; Kaynarov, D.; Kermedchiev, M.; Todorova, M.; Dolashka, P. Antibacterial Properties of Peptide and Protein Fractions from Cornu aspersum Mucus. Molecules 2024, 29, 2886. https://doi.org/10.3390/molecules29122886
Velkova L, Dolashki A, Petrova V, Pisareva E, Kaynarov D, Kermedchiev M, Todorova M, Dolashka P. Antibacterial Properties of Peptide and Protein Fractions from Cornu aspersum Mucus. Molecules. 2024; 29(12):2886. https://doi.org/10.3390/molecules29122886
Chicago/Turabian StyleVelkova, Lyudmila, Aleksandar Dolashki, Ventsislava Petrova, Emiliya Pisareva, Dimitar Kaynarov, Momchil Kermedchiev, Maria Todorova, and Pavlina Dolashka. 2024. "Antibacterial Properties of Peptide and Protein Fractions from Cornu aspersum Mucus" Molecules 29, no. 12: 2886. https://doi.org/10.3390/molecules29122886
APA StyleVelkova, L., Dolashki, A., Petrova, V., Pisareva, E., Kaynarov, D., Kermedchiev, M., Todorova, M., & Dolashka, P. (2024). Antibacterial Properties of Peptide and Protein Fractions from Cornu aspersum Mucus. Molecules, 29(12), 2886. https://doi.org/10.3390/molecules29122886