Aberrant N-Glycosylation Profile of Serum Immunoglobulins is a Diagnostic Biomarker of Urothelial Carcinomas
Abstract
:1. Introduction
2. Results
2.1. Downregulation of Asialo Biantennary Type N-Glycans and Accumulation of Asialo-Bisecting GlcNAc with Core Fucosylated N-Glycan on Igs May Occur as a UC-Associated Aberrant N-Glycosylation of Igs
2.2. UC Diagnostic N-Glycan Score Based on Aberrant N-Glycosylation of Igs Was Far Superior to Classic Urine Cytology and Hematuria Status
3. Discussion
4. Materials and Methods
4.1. Serum Samples
4.2. Purification and Quantification of the Igs Fraction from Serum
4.3. Serum N-Glycomics of Igs Performed by Using the Glycoblotting Method and Mass Spectorometric Analysis
4.4. Statistical Analysis
5. Conclusions
Acknowledgments
Author Contributions
Conflicts of Interest
Abbreviations
UC | Urothelial carcinoma |
UCB | Urothelial carcinoma of the bladder |
UTUC | Upper urinary tract urothelial carcinoma |
HV | Healthy volunteers |
PC | Prostate cancer |
BPH | Beneign prostatic hyperplasia |
HSPC | Hormone sensitive prostate cancer |
NMIBC | Nonmuscle invasive bladder cancer |
MIBC | Muscle invasive bladder cancer |
NI-UTUC | Noninvasive UTUC |
I-UTUC | Invasive UTUC |
Igs | Immunogloblins |
dNGScore | Diagnostic N-glycan Score |
AUC | Area under the curve |
ROC | Receiver operating characteristic curves |
BTA | Bladder tumor antigen |
NMP22 | Nuclear matrix protein number 22 |
IQR | Interquartile range |
NPV | Negative predictive value |
PPV | Positive predictive value |
UTI | Urinary tract infection |
MALDI-TOF | Matrix-assisted laser desorption time-of-flight |
Man | Mannose |
Gal | Galactose |
GlcNAc | N-acetylglucosamine |
Fuc | Fucose |
Sia | N-acetylneuraminic acid |
CBB | Coomassie brilliant blue |
Appendix A
# | m/z | Composition |
---|---|---|
1 | 1362.5 | (Hex)2 + (Man)3(GlcNAc)2 |
2 | 1524.5 | (Hex)3 + (Man)3(GlcNAc)2 |
3 | 1565.5 | (Hex)5 + (HexNAc)3 |
4 | 1590.6 | (HexNAc)2(dHex)1 + (Man)3(GlcNAc)2 |
5 | 1606.6 | (Hex)1(HexNAc)2 + (Man)3(GlcNAc)2 |
6 | 1647.6 | (HexNAc)3 + (Man)3(GlcNAc)2 |
7 | 1686.6 | (Hex)4 + (Man)3(GlcNAc)2 |
8 | 1708.6 | (Hex)1(HexNAc)1(NeuAc)1 + (Man)3(GlcNAc)2 |
9 | 1752.6 | (Hex)1(HexNAc)2(dHex)1 + (Man)3(GlcNAc)2 |
10 | 1768.6 | (Hex)2(HexNAc)2 + (Man)3(GlcNAc)2 |
11 | 1793.7 | (HexNAc)3(dHex)1 + (Man)3(GlcNAc)2 |
12 | 1809.7 | (Hex)1(HexNAc)3 + (Man)3(GlcNAc)2 |
13 | 1848.6 | (Hex)5 + (Man)3(GlcNAc)2 |
14 | 1870.7 | (Hex)2(HexNAc)1(NeuAc)1 + (Man)3(GlcNAc)2 |
15 | 1914.7 | (Hex)2(HexNAc)2(dHex)1 + (Man)3(GlcNAc)2 |
16 | 1955.7 | (Hex)1(HexNAc)3(dHex)1 + (Man)3(GlcNAc)2 |
17 | 2010.7 | (Hex)6 + (Man)3(GlcNAc)2 |
18 | 2032.7 | (Hex)3(HexNac)1(NeuAc)1 + (Man)3(GlcNAc)2 |
19 | 2057.8 | (Hex)1(HexNAc)2(dHex)1(NeuAc)1+ (Man)3(GlcNAc)2 |
20 | 2073.8 | (Hex)2(HexNAc)2(NeuAc)1+ (Man)3(GlcNAc)2 |
21 | 2117.8 | (Hex)2(HexNAc)3(dHex)1 + (Man)3(GlcNAc)2 |
22 | 2219.8 | (Hex)2(HexNAc)2(dHex)1(NeuAc)1 + (Man)3(GlcNAc)2 |
23 | 2336.9 | (Hex)3(HexNAc)4 + (Man)3(GlcNAc)2 |
IS | 2348.9 1 | Internal standard (BOA-labeled A2 amide) |
24 | 2378.9 | (Hex)2(HexNAc)2(NeuAc)2 + (Man)3(GlcNAc)2 |
25 | 2422.9 | (Hex)2(HexNAc)3(dHex)1(NeuAc)1 + (Man)3(GlcNAc)2 |
26 | 2524.9 | (Hex)2(HexNAc)2(dHex)1(NeuAc)2 + (Man)3(GlcNAc)2 |
27 | 2727.9 | (Hex)2(HexNAc)3(dHex)1(NeuAc)2 + (Man)3(GlcNAc)2 |
28 | 2743.9 | (Hex)3(HexNAc)3(NeuAc)2 + (Man)3(GlcNAc)2 |
29 | 2890.1 | (Hex)3(HexNAc)3(dHex)1(NeuAc)2 + (Man)3(GlcNAc)2 |
30 | 3049.1 | (Hex)3(HexNAc)3(NeuAc)3 + (Man)3(GlcNAc)2 |
31 | 3195.2 | (Hex)3(HexNAc)3(dHex)1(NeuAc)3 + (Man)3(GlcNAc)2 |
32 | 3341.2 | (Hex)3 (HexNAc)3 (Deoxyhexose)2 (NeuAc)3 + (Man)3(GlcNAc)2 |
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Non-UC a | UC b | p Value a vs. b | ||||
---|---|---|---|---|---|---|
HV | n, (%) | PC | n, (%) | n, (%) | ||
Total patients (n) | 339 | 96 | 237 | |||
Sex (Male, %) | 122 (36.0) | 96 (100) | 191 (80.6) | <0.001 | ||
Median age (IQR 1) | 68.0 (63–73) | 74.0 (68–78) | 70.0 (62–75) | 0.700 | ||
Former or current smoker | 75 (22.1) | 18 (18.8) | 71 (29.9) | 0.101 | ||
Stone former | 4 (1.2) | 0 (0) | 0 (0) | 0.184 | ||
BPH 2 | 7 (2.1) | 0 (0) | 0 (0) | 0.145 | ||
HSPC 3 | 0 (0) | 96 (100) | 0 (0) | <0.001 | ||
hematuria+ | 0 (0) | 0 (0) | 186 (78.5) | <0.001 | ||
Urine Cytology Class | ||||||
I, II | 81 (34.2) | |||||
III | 58 (24.5) | |||||
IV | 16 (6.7) | |||||
V | 82 (34.6) | |||||
Tumor Location of UC | ||||||
Bladder | 177 (67.6) | |||||
Renal pelvis | 27 (11.4) | |||||
Ureter | 28 (11.8) | |||||
Multiple | 4 (1.7) | |||||
Tumor Grade of UC | ||||||
Low grade noninvasive | 68 (28.7) | |||||
High grade noninvasive | 43 (18.1) | |||||
Muscle invasive | 109 (45.9) | |||||
Lymph node stage N1 | 0 (0.0) | 20 (8.4) | 0.115 | |||
Metastatic disease | 4 (4.2) | 47 (19.8) | 0.010 |
Variables | Wilks’ Lambda | F Value | ODF 1 | TDF 2 | p Value | Discriminant Function |
---|---|---|---|---|---|---|
m/z 1606 | 0.9742 | 17.72 | 1 | 670 | <0.001 | 0.1925 |
m/z 1769 | 0.9707 | 20.24 | 1 | 670 | <0.001 | 0.4932 |
m/z 2074 | 0.9377 | 44.54 | 1 | 670 | <0.001 | 0.4941 |
m/z 2118 | 0.5894 | 466.73 | 1 | 670 | <0.001 | ‒3.2460 |
m/z 2423 | 0.9984 | 1.04 | 1 | 670 | <0.001 | 0.6179 |
Constant term | ‒0.4905 |
Variables | AUC | 95% CI | Sensitivity (%) | Specificity (%) | PPV (%) | NPV (%) |
---|---|---|---|---|---|---|
Hematuria | 0.892 | 0.861–0.924 | 78.5 | 100.0 | 100.0 | 89.5 |
Urine cytology | 0.707 | 0.661–0.753 | 41.4 | 100.0 | 100.0 | 75.8 |
dNGScore 1 for UC | 0.969 | 0.952–0.986 | 92.8 | 97.2 | 94.8 | 96.1 |
dNGScore for UCB | 0.993 | 0.982–0.100 | 98.3 | 97.2 | 93.5 | 99.3 |
dNGScore for UTUC | 0.907 | 0.854–0.959 | 77.1 | 97.2 | 79.7 | 96.8 |
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Tanaka, T.; Yoneyama, T.; Noro, D.; Imanishi, K.; Kojima, Y.; Hatakeyama, S.; Tobisawa, Y.; Mori, K.; Yamamoto, H.; Imai, A.; et al. Aberrant N-Glycosylation Profile of Serum Immunoglobulins is a Diagnostic Biomarker of Urothelial Carcinomas. Int. J. Mol. Sci. 2017, 18, 2632. https://doi.org/10.3390/ijms18122632
Tanaka T, Yoneyama T, Noro D, Imanishi K, Kojima Y, Hatakeyama S, Tobisawa Y, Mori K, Yamamoto H, Imai A, et al. Aberrant N-Glycosylation Profile of Serum Immunoglobulins is a Diagnostic Biomarker of Urothelial Carcinomas. International Journal of Molecular Sciences. 2017; 18(12):2632. https://doi.org/10.3390/ijms18122632
Chicago/Turabian StyleTanaka, Toshikazu, Tohru Yoneyama, Daisuke Noro, Kengo Imanishi, Yuta Kojima, Shingo Hatakeyama, Yuki Tobisawa, Kazuyuki Mori, Hayato Yamamoto, Atsushi Imai, and et al. 2017. "Aberrant N-Glycosylation Profile of Serum Immunoglobulins is a Diagnostic Biomarker of Urothelial Carcinomas" International Journal of Molecular Sciences 18, no. 12: 2632. https://doi.org/10.3390/ijms18122632
APA StyleTanaka, T., Yoneyama, T., Noro, D., Imanishi, K., Kojima, Y., Hatakeyama, S., Tobisawa, Y., Mori, K., Yamamoto, H., Imai, A., Yoneyama, T., Hashimoto, Y., Koie, T., Tanaka, M., Nishimura, S. -I., Kurauchi, S., Takahashi, I., & Ohyama, C. (2017). Aberrant N-Glycosylation Profile of Serum Immunoglobulins is a Diagnostic Biomarker of Urothelial Carcinomas. International Journal of Molecular Sciences, 18(12), 2632. https://doi.org/10.3390/ijms18122632