Figure 1.
2D structure of ordnance compounds.
Figure 1.
2D structure of ordnance compounds.
Figure 2.
Relationship between experimental and estimated EC50: fertilization (Eq_01, left hand graphic), and embryological development of sea urchin (Eq_02, right hand graphic).
Figure 2.
Relationship between experimental and estimated EC50: fertilization (Eq_01, left hand graphic), and embryological development of sea urchin (Eq_02, right hand graphic).
Figure 3.
Relationship between experimental and estimated EC50: germination of sea urchin (Eq_03, left hand graphic), and survival and reproductive success of polychaete (Eq_04, right hand graphic).
Figure 3.
Relationship between experimental and estimated EC50: germination of sea urchin (Eq_03, left hand graphic), and survival and reproductive success of polychaete (Eq_04, right hand graphic).
Figure 4.
Relationship between experimental and estimated EC50: larvae survival of redfish (Eq_05, left hand graphic), and juveniles survival of mysid (Eq_06, right hand graphic).
Figure 4.
Relationship between experimental and estimated EC50: larvae survival of redfish (Eq_05, left hand graphic), and juveniles survival of mysid (Eq_06, right hand graphic).
Figure 5.
Relationship between experimental and estimated EC50: germling length (Eq_07, left hand graphic), and germling cell number of macro-alga (Eq_08, right hand graphic).
Figure 5.
Relationship between experimental and estimated EC50: germling length (Eq_07, left hand graphic), and germling cell number of macro-alga (Eq_08, right hand graphic).
Figure 6.
Relationship between experimental and estimated EC50: survival of macro-alga (Eq_09, left hand graphic), and NOEC as fertilization of sea urchin (Eq_10, right hand graphic).
Figure 6.
Relationship between experimental and estimated EC50: survival of macro-alga (Eq_09, left hand graphic), and NOEC as fertilization of sea urchin (Eq_10, right hand graphic).
Figure 7.
Relationship between experimental and estimated NOEC: embryological development (Eq_11, left hand graphic), and germination of sea urchin (Eq_12, right hand graphic).
Figure 7.
Relationship between experimental and estimated NOEC: embryological development (Eq_11, left hand graphic), and germination of sea urchin (Eq_12, right hand graphic).
Figure 8.
Relationship between experimental and estimated NOEC: laid eggs/female of polychaete (Eq_13, left hand graphic), and larvae survival of redfish (Eq_14, right hand graphic).
Figure 8.
Relationship between experimental and estimated NOEC: laid eggs/female of polychaete (Eq_13, left hand graphic), and larvae survival of redfish (Eq_14, right hand graphic).
Figure 9.
Relationship between experimental and estimated NOEC: survival of mysid (Eq_15, left hand graphic), and survival of macro-alga (Eq_16, right hand graphic).
Figure 9.
Relationship between experimental and estimated NOEC: survival of mysid (Eq_15, left hand graphic), and survival of macro-alga (Eq_16, right hand graphic).
Figure 10.
Relationship between experimental and estimated LOEC: fertilization (Eq_17, left hand graphic), and embryological development of sea urchin (Eq_18, right hand graphic).
Figure 10.
Relationship between experimental and estimated LOEC: fertilization (Eq_17, left hand graphic), and embryological development of sea urchin (Eq_18, right hand graphic).
Figure 11.
Relationship between experimental and estimated LOEC: germination of sea urchin (Eq_19, left hand graphic), and laid eggs/female of polychaete (Eq_20, right hand graphic).
Figure 11.
Relationship between experimental and estimated LOEC: germination of sea urchin (Eq_19, left hand graphic), and laid eggs/female of polychaete (Eq_20, right hand graphic).
Figure 12.
Relationship between experimental and estimated LOEC: larvae survival of redfish (Eq_21, left hand graphic), and survival of mysid (Eq_22, right hand graphic).
Figure 12.
Relationship between experimental and estimated LOEC: larvae survival of redfish (Eq_21, left hand graphic), and survival of mysid (Eq_22, right hand graphic).
Figure 13.
Relationship between experimental and estimated LOEC: germling length and cell number (Eq_22, left hand graphic), and survival of macro-alga (Eq_24, right hand graphic).
Figure 13.
Relationship between experimental and estimated LOEC: germling length and cell number (Eq_22, left hand graphic), and survival of macro-alga (Eq_24, right hand graphic).
Table 1.
Ordnance compounds toxicity: experimental EC50.
Table 1.
Ordnance compounds toxicity: experimental EC50.
Specie | Endpoint | 2,4-DNT | 2,6-DNT | 1,3-DNB | 2,4,6-TNT | 1,3,5-TNB | PAc | Tetryl | RDX |
---|
sea urchin | fertilization | 1.8325 | n.a. | 2.4116 | n.a. | 1.9243 | 2.5428 | 0.4771 | n.a. |
| embryological development | 1.7110 | 0.8261 | 1.9638 | 1.0792 | 0.1139 | 2.4487 | −1.0969 | n.a. |
| germination | 0.3979 | 0.8261 | −0.0706 | 0.3979 | −1.0969 | 2.6180 | −0.1739 | 1.0792 |
|
polychaete | survival and reproductive success | 0.7559 | 0.3222 | 0.5682 | 0.2553 | −0.2218 | 2.1903 | −1.6990 | 1.4150 |
|
redfish | larvae survival | 1.6812 | 1.5315 | 1.6628 | 0.9138 | 0.1461 | 2.1038 | 0.2553 | n.a. |
|
mysid | juveniles survival | 0.7324 | 0.7482 | 0.8513 | −0.0088 | 0.1139 | 1.1139 | 0.1139 | 1.6628 |
|
macro-alga | germling length | 0.2304 | 0.4624 | −0.3872 | −0.1192 | −1.3010 | 1.9731 | −0.4685 | 0.9085 |
| germling cell number | 0.3222 | 0.6232 | −0.3468 | 0.1461 | −1.2218 | 2.0719 | −0.3979 | 0.9912 |
| survival | 1.3222 | 1.1139 | 1.1761 | 0.8865 | 0.3222 | 2.4232 | −1.2218 | n.a. |
Table 2.
Ordnance compounds toxicity: experimental NOEC values.
Table 2.
Ordnance compounds toxicity: experimental NOEC values.
Specie | Endpoint | 2,4-DNT | 2,6-DNT | 1,3-DNB | 2,4,6-TNT | 1,3,5-TNB | PAc | Tetryl | RDX |
---|
sea urchin | fertilization | 1.5911 | 1.3617 | 1.9243 | 2.0128 | 1.5441 | 2.2504 | n.a. | 1.8751 |
| embryological development | 1.2553 | n.a. | n.a. | 0.3222 | −0.6198 | 2.2504 | −1.4437 | 1.8751 |
| germination | −0.0269 | 0.3424 | −0.5229 | 0.2304 | −1.3372 | 2.2279 | −0.3010 | 0.9638 |
|
polychaete | laid eggs/female | n.a. | n.a. | 0.3802 | 0.1461 | −0.4559 | 2.0334 | −1.8239 | 1.0755 |
|
redfish | larvae survival | 1.5391 | 1.1367 | 1.4014 | 0.7993 | −0.0044 | 1.9868 | 0.0792 | 1.8325 |
|
mysid | survival | 0.5563 | 0.6990 | 0.7160 | −0.1871 | −0.0177 | 0.9638 | 0.0414 | 1.6721 |
|
macro-alga | germling length and cell number | n.a. | n.a. | n.a. | n.a. | −1.5376 | n.a. | −1.0088 | n.a. |
| survival | 0.9777 | 1.1644 | 0.9868 | 0.7853 | 0.0792 | 2.2989 | −1.5850 | 1.6902 |
Table 3.
Ordnance compounds toxicity: experimental LOEC values.
Table 3.
Ordnance compounds toxicity: experimental LOEC values.
Specie | Endpoint | 2,4-DNT | 2,6-DNT | 1,3-DNB | 2,4,6-TNT | 1,3,5-TNB | PAc | Tetryl | RDX |
---|
sea urchin | fertilization | 1.8751 | 1.6532 | 2.0414 | n.a. | 1.6812 | 2.5465 | −0.2218 | n.a. |
| embryological development | 1.5911 | 0.6990 | 1.9243 | 0.9590 | −0.3188 | 2.5465 | −1.0809 | n.a. |
| germination | 0.2553 | 0.6721 | −0.1871 | 0.5315 | −1.0315 | 2.5263 | 0.0000 | 1.1959 |
|
polychaete | laid eggs/female | 0.3802 | 0.2553 | 0.6435 | 0.4472 | −0.2147 | 2.2967 | −1.5850 | 1.3747 |
|
redfish | larvae survival | 1.8248 | 1.5051 | 1.6955 | 1.0334 | 0.3010 | 2.2718 | 0.4150 | n.a. |
|
mysid | survival | 0.8325 | 0.9912 | 0.9868 | 0.1271 | 0.2742 | 1.3139 | 0.3010 | n.a. |
|
macro-alga | germling length and number | cell −0.3188 | 0.0792 | −0.6778 | −0.6778 | −1.3372 | 1.9638 | −0.6021 | 0.6990 |
|
| survival | 1.2788 | 1.4713 | 1.2923 | 1.0645 | 0.3802 | 2.5786 | −1.2518 | n.a. |
Table 4.
MDF SAR monovariate models: EC50.
Table 4.
MDF SAR monovariate models: EC50.
| sea urchin
|
---|
Endpoint | fertilization | embryological development | germination |
---|
MDF SAR Equation | Ŷ = − 0.16 – 0.37·X | Ŷ = −7.09 – 1.09·X | Ŷ = −1.50 + 6.28·10−2·X |
(Eq_no) | Eq_01 | Eq_02 | Eq_03 |
Correlation coefficient (r) | 0.9997 | 0.9650 | 0.9435 |
95% confidence interval for r | [0.9885–0.9999] | [0.6193–0.9973] | [0.5477–0.9942] |
Standard error of estimated (s) | 0.02 | 0.35 | 0.39 |
Fisher parameter (p-value) | 5674 (p = 5.16·10−6) | 68 (p = 4.32·10−4) | 49 (p = 4.32·10−4) |
Cross-validation leave-one-out score (rcv-loo2) | 0.9984 | 0.8460 | 0.8333 |
Sample size | 5 | 7 | 8 |
Descriptor (X) | LIMmwQt | lNPmfQt | aIDmjQg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Partial charge (Q) |
• Interaction via | Bonds (topology) | Bonds (topology) | Space (geometry) |
• Interaction Model | Q2/d | Q2/d2 | (Q·d)−1 |
• Structure on Activity Scale | Logarithmic | Logarithmic | Inversed |
Endpoint | survival and reproductive success (polychaete) | larvae survival (redfish) | juveniles survival (mysid) |
|
MDF SAR Equation | Ŷ = −1.73 + 16.91·X | Ŷ = 0.28 − 1.31·X | Ŷ = 3.93 − 0.80·X |
Eq | Eq_04 | Eq_05 | Eq_06 |
Correlation coefficient (r) | 0.9655 | 0.9531 | 0.9787 |
95% confidence interval | [0.7000–0.9965] | [0.5186–0.9963] | [0.7511–0.9983] |
Standard error of estimated (s) | 0.32 | 0.25 | 0.10 |
Fisher parameter (p-value) | 82 (p = 1.00·10−4) | 50 (p = 8.92·10−4) | 114 (p = 1.25·10−4) |
Cross-validation leave-one-out score (rcv-loo2) | 0.8852 | 0.8412 | 0.9267 |
Sample size | 8 | 7 | 7 |
MDF Descriptor | anDRJQt | LHDmjQg | imMrtCg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Cardinality (C) |
• Interaction via | Bonds (topology) | Space (geometry) | Space (geometry) |
• Interaction Model | Q·d | (Q·d)−1 | C2/d4 |
• Structure on Activity Scale | Inversed | Logarithmic | Inversed |
| macro-alga
|
Endpoint | germling length | germling cell number | gurvival |
|
MDF SAR Equation | Ŷ = −6.13 − 1.88·X | Ŷ = −6.02 − 1.87·X | Ŷ = −0.79 − 102.72·X |
Eq | Eq_07 | Eq_08 | Eq_09 |
Correlation coefficient (r) | 0.9445 | 0.9359 | 0.9835 |
95% confidence interval | [0.7170–0.9901] | [0.6790–0.9885] | [0.8884–0.9976] |
Standard error of estimated (s) | 0.35 | 0.38 | 0.22 |
Fisher parameter (p-value) | 50 (p = 4.09·10−4) | 42 (p = 6.28·10−4) | 148 (p = 6.65·10−5) |
Cross-validation leave-one-out score (rcv-loo2) | 0.8045 | 0.7933 | 0.9503 |
Sample size | 8 | 8 | 7 |
Descriptor (X) | LIDmjQg | LIDmjQg | IAPmtQt |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Partial charge (Q) |
• Interaction via | Space (geometry) | Space (geometry) | Bonds (topology) |
• Interaction Model | (Q·d) −1 | (Q·d) −1 | Q2·d−4 |
• Structure on Activity Scale | Logarithm | Logarithm | Identity |
Table 5.
MDF SAR monovariate models: NOEC.
Table 5.
MDF SAR monovariate models: NOEC.
| sea urchin
|
---|
Endpoint | fertilization | embryological development | germination |
---|
MDF SAR Equation | Ŷ = 1.42 + 0.17·X | Ŷ = −1.27 + 1.27·10−3·X | Ŷ = −1.74 + 6.08·10−2·X |
(Eq_no) | Eq_10 | Eq_11 | Eq_12 |
Correlation coefficient (r) | 0.9739 | 0.9859 | 0.9355 |
95% confidence interval for r | [0.8283–0.9962] | [0.8721–0.9985] | [0.6772–0.9885] |
Standard error of estimated (s) | 0.08 | 0.27 | 0.41 |
Fisher parameter (p-value) | 92 (p = 2.09·10−4) | 139 (p = 2.97·10−4) | 42 (p = 6.38·10−4) |
Cross-validation leave-one-out score (rcv-loo2) | 0.9101 | 0.9417 | 0.8105 |
Sample size | 7 | 6 | 8 |
Descriptor (X) | ASPmwQg | asmrfQt | aIDmjQg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Partial charge (Q) |
• Interaction via | Space (geometry) | Bonds (topology) | Space (geometry) |
• Interaction Model | Q2·d−1 | Q2·d−2 | (Q·d) −1 |
• Structure on Activity Scale | Absolute | Inversed | Inversed |
Endpoint | survival and reproductive success (polychaete) | larvae survival (redfish) | juveniles survival (mysid) |
|
MDF SAR Equation | Ŷ = −10.25 − 1.42·X | Ŷ = 9.35·10−2 − 1.37·X | Ŷ = 19.24 + 668.36·X |
Eq | Eq_13 | Eq_14 | Eq_15 |
Correlation coefficient (r) | 0.9754 | 0.9542 | 0.9048 |
95% confidence interval | [0.7861–0.9974] | [0.7616–0.9919] | [0.5521–0.9828] |
Standard error of estimated (s) | 0.32 | 0.24 | 0.28 |
Fisher parameter (p-value) | 78 (p = 8.98·10−4) | 61 (p = 2.33·10−4) | 27 (p = 2.01·10−3) |
Cross-validation leave-one-out score (rcv-loo2) | 0.9060 | 0.8394 | 0.7263 |
Sample size | 6 | 8 | 8 |
MDF Descriptor | LsmrfQg | LHDmjQg | iBPMwEt |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Electronegativity (E) |
• Interaction via | Space (geometry) | Space (geometry) | Bonds (topology) |
• Interaction Model | Q2·d−2 | Q2·d−2 | E2·d−1 |
• Structure on Activity Scale | Logarithm | Logarithm | Inversed |
Endpoint | survival (macro-alga) | |
| |
MDF SAR Equation | Ŷ = 3.71 − 1.28·X | |
Eq | Eq_16 | |
Correlation coefficient (r) | 0.9578 | |
95% confidence interval | [0.7786–0.9925] | |
Standard error of estimated (s) | 0.36 | |
Fisher parameter (p-value) | 67 (p = 1.83·10−4) | |
Cross-validation leave-one-out score (rcv-loo2) | 0.8532 | |
Sample size | 8 | |
Descriptor (X) | LnDRJQt | |
Dominant Atomic Property | Partial charge (Q) | |
• Interaction via | Bonds (topology) | |
• Interaction Model | Q·d | |
• Structure on Activity Scale | Logarithm | |
Table 6.
MDF SAR monovariate models: LOEC.
Table 6.
MDF SAR monovariate models: LOEC.
| sea urchin
|
---|
Endpoint | fertilization | embryological development | germination |
---|
MDF SAR Equation | Ŷ = 0.57 − 47.56·X | Ŷ = −7.62 −1.14·X | Ŷ = −1.43 + 6.02·10−2·X |
(Eq_no) | Eq_17 | Eq_18 | Eq_19 |
Correlation coefficient (r) | 0.9993 | 0.9653 | 0.9357 |
95% confidence interval for r | [0.9932–0.9999] | [0.7771–0.9950] | [0.6781–0.9885] |
Standard error of estimated (s) | 0.04 | 0.36 | 0.40 |
Fisher parameter (p-value) | 2781 (p = 7.74·10−7) | 68 (p = 4.22·10−4) | 42 (p = 6.33·10−4) |
Cross-validation leave-one-out score (rcv-loo2) | 0.9962 | 0.8753 | 0.8140 |
Sample size | 6 | 7 | 8 |
Descriptor (X) | IAPmfQt | lNPmfQt | aIDmjQg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Partial charge (Q) |
• Interaction via | Bonds (topology) | Bonds (topology) | Space (geometry) |
• Interaction Model | Q2·d−2 | Q2·d−2 | Q2·d−2 |
• Structure on Activity Scale | Identity | Logarithm | Inversed |
Endpoint | survival and reproductive success (polychaete) | larvae survival (redfish) | juveniles survival (mysid) |
|
MDF SAR Equation | Ŷ = −1.69 + 16.60·X | Ŷ = 0.39 − 1.30·X | Ŷ = 4.22 − 0.83·X |
Eq | Eq_20 | Eq_21 | Eq_22 |
Correlation coefficient (r) | 0.9612 | 0.9694 | 0.9897 |
95% confidence interval | [0.7949–0.9931] | [0.8012–0.9956] | [0.9290–0.9985] |
Standard error of estimated (s) | 0.34 | 0.20 | 0.07 |
Fisher parameter (p-value) | 73 (p = 1.42·10−4) | 78 (p = 3.09·10−4) | 239 (p = 2.06·10−5) |
Cross-validation leave-one-out score (rcv-loo2) | 0.8763 | 0.8844 | 0.9585 |
Sample size | 8 | 7 | 7 |
MDF Descriptor | anDRJQt | LHDmjQg | imMrtCg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) | Cardinality (C) |
• Interaction via | Bonds (topology) | Space (geometry) | Space (geometry) |
• Interaction Model | Q·d | Q2·d−2 | Q2·d−4 |
• Structure on Activity Scale | Inversed | Logarithm | Inversed |
| macro-alga |
Endpoint | germling length and cell number | survival |
|
MDF SAR Equation | Ŷ = −2.02 + 5.99·10−2·X | Ŷ = 3.69 + 0.11·X |
Eq | Eq_23 | Eq_24 |
Correlation coefficient (r) | 0.9504 | 0.9764 |
95% confidence interval | [0.7439–0.9912] | [0.8436–0.9966] |
Standard error of estimated (s) | 0.35 | 0.28 |
Fisher parameter (p-value) | 56 (p = 2.94·10−4) | 102 (p = 1.62·10−4) |
Cross-validation leave-one-out score (rcv-loo2) | 0.8686 | 0.9091 |
Sample size | 8 | 7 |
Descriptor (X) | aIDmjQg | iIDdPQg |
Dominant Atomic Property | Partial charge (Q) | Partial charge (Q) |
• Interaction via | Space (geometry) | Space (geometry) |
• Interaction Model | Q2·d−2 | Q2 |
• Structure on Activity Scale | Inversed | Inversed |
Table 7.
Predicted activities of ordnance compounds by using the MDF SAR mono-variate models.
Table 7.
Predicted activities of ordnance compounds by using the MDF SAR mono-variate models.
Activity - Specie | Toxicity | Compound | Eq_ | X | ŶPred |
---|
Fertilization - sea urchin | EC50 | 2,6-DNT | 01 | −4.9295 | 1.6618 |
| EC50 | 2,4,6-TNT | 01 | −6.6904 | 2.3116 |
| EC50 | RDX | 01 | −5.8418 | 1.9984 |
| LOEC | RDX | 17 | −0.0398 | 2.4593 |
|
Embryological development - sea urchin | EC50 | RDX | 02 | −7.9917 | 1.6018 |
| NOEC | 2,6-DNT | 11 | 6355.74 | 6.8112 |
| | 1,3-DNB | 11 | 2900.88 | 2.4159 |
| LOEC | RDX | 18 | −5.8418 | 1.9984 |
|
Fertilization - sea urchin | NOEC | Tetryl | 10 | 333.40 | 56.8491 |
|
Larvae survival - redfish | EC50 | RDX | 05 | −1.0141 | 1.6124 |
| LOEC | RDX | 21 | −1.0141 | 1.7153 |
|
Juveniles survival - mysid | EC50 | RDX | 06 | 4.6574 | 0.1832 |
|
Survival - mysid | LOEC | RDX | 22 | 4.6574 | 0.3365 |
|
Laid eggs/female - polychaete | NOEC | 2,4-DNT | 13 | −7.2544 | 0.0519 |
| | 2,6-DNT | 13 | −8.5506 | 1.8932 |
|
Survival - macro-alga | EC50 | RDX | 09 | −0.0562 | 4.9762 |
| LOEC | RDX | 24 | 32.7066 | −0.1848 |