Frontal Cortex Transcriptome Analysis of Mice Exposed to Electronic Cigarettes During Early Life Stages
Abstract
:1. Introduction
2. Materials and Methods
2.1. Animal Care and Exposures
2.2. E-Cigarette Exposures
2.3. Sample Preparation
2.4. RNA-Seq, Ingenuity Pathway Analyses and Statistical Analyses
2.5. Real-Time Quantitative Polymerase Chain Reaction (qPCR)
2.6. Statistical Analysis for Obstetric Outcomes and qPCR
3. Results
3.1. Effect of E-Cigarette Exposure on Neonatal Growth
3.2. Global Gene Expression Changes in Murine Frontal Cortex Samples from E-Cigarette Exposed Male and Female Offspring
3.3. IPA Predicted Downstream Disease and Biological Function Effects Associated with the Observed Gene Expression Changes
3.4. Follow-Up of Gene Expression Analysis of Selected Genes by qPCR in Male Frontal Cortex Samples
4. Discussion
5. Conclusions
Acknowledgments
Author Contributions
Conflicts of Interest
Abbreviations
E-cigarettes | Electronic cigarettes |
CNS | central nervous system |
PND | postnatal day |
RNA-Seq | RNA Sequencing |
IPA | Ingenuity® Pathway Analysis |
GD | gestational day |
GRAS | generally regarded as safe |
Ngfr | nerve growth factor receptor |
Chat | choline O-acetyltransferase |
Bdnf | brain derived neurotrophic factor |
Gdnf | glial cell line derived neurotrophic factor |
Gal | galanin |
Tbr1 | T-box brain gene 1 |
Adra1d | alpha-1D adrenoreceptor |
Gapdh | glyceraldehyde-3-phosphate dehydrogenase |
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Female Offspring Exposed to E-Cigarette Containing Nicotine | ||
Ingenuity Disease and Disorders | p-Value | # of Molecules |
Cancer | 5.43 E−05–2.09 E−28 | 1157 |
Organismal Injury and Abnormalities | 7.31 E−05–2.09 E−28 | 1162 |
Neurological Disease | 7.75 E−05–1.78 E−27 | 484 |
Psychiatric Disorders | 7.00 E−05–1.33 E−22 | 320 |
Gastrointestinal Disease | 5.85 E−05–1.26 E−21 | 838 |
Female Offspring Exposed to E-Cigarette without Nicotine | ||
Ingenuity Disease and Disorders | p-Value | # of Molecules |
Cancer | 6.03 E−06–3.98 E−46 | 2121 |
Organismal Injury and Abnormalities | 6.82 E−06–3.98 E−46 | 2130 |
Neurological Disease | 8.19 E−06–1.55 E−35 | 811 |
Gastrointestinal Disease | 6.03 E−06–3.33 E−35 | 1553 |
Psychiatric Disorders | 8.19 E−06–5.77 E−31 | 537 |
Male Offspring Exposed to E-Cigarette Containing Nicotine | ||
Ingenuity Disease and Disorders | p-Value | # of Molecules |
Cancer | 1.38 E−02–2.18 E−12 | 137 |
Organismal Injury and Abnormalities | 1.38 E−02–2.18 E−12 | 137 |
Dermatological Diseases and Conditions | 6.92 E−03–9.47 E−11 | 80 |
Connective Tissue Disorders | 6.92 E−03–1.73 E−10 | 83 |
Gastrointestinal Disease | 1.38 E−02–7.37 E−06 | 99 |
Male Offspring Exposed to E-Cigarette without Nicotine | ||
Ingenuity Disease and Disorders | p-Value | # of Molecules |
Cancer | 2.97 E−06–2.20 E−35 | 2096 |
Organismal Injury and Abnormalities | 2.97 E−06–2.20 E−35 | 2108 |
Neurological Disease | 3.27 E−06–7.20 E−34 | 814 |
Gastrointestinal Disease | 1.10 E−06–1.27 E−30 | 1516 |
Psychiatric Disorders | 3.27 E−06–1.34 E−27 | 510 |
Gene | Frontal Cortex Samples from Male Offspring Exposed to E-Cigarettes Containing Nicotine | Frontal Cortex Samples from Male Offspring Exposed to E-Cigarettes Without Nicotine | ||||||
---|---|---|---|---|---|---|---|---|
RNA-Seq | qPCR | RNA-Seq | qPCR | |||||
Fold Change | Adjusted p-Value | Fold Change | p-Value | Fold Change | Adjusted p-Value | Fold Change | p-Value | |
Ngfr | 2.37 | 3.94E−3 | 2.82 | NS | 3.16 | 1.57E−6 | 4.36 | 0.05 |
Chat | 1.88 | 6.38E−4 | 2.17 | NS | 2.66 | 9.71E−11 | 3.31 | NS |
Bdnf | −1.22 | NS | −0.91 | NS | −1.67 | 1.81E−5 | −1.55 | NS |
Gdnf | ND | NS | 1.47 | NS | 1.93 | 3.6E−5 | 2.13 | NS |
Gal | ND | NS | 5.6 | 0.001 | 3.66 | 2.01E−6 | 9.56 | 0.001 |
Tbr1 | −1.31 | NS | −1.25 | NS | −2.02 | 1.68E−11 | −1.91 | NS |
Adra1d | −1.47 | NS | −2.21 | NS | −2.29 | 9.86E−5 | −3.05 | 0.05 |
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Share and Cite
Lauterstein, D.E.; Tijerina, P.B.; Corbett, K.; Akgol Oksuz, B.; Shen, S.S.; Gordon, T.; Klein, C.B.; Zelikoff, J.T. Frontal Cortex Transcriptome Analysis of Mice Exposed to Electronic Cigarettes During Early Life Stages. Int. J. Environ. Res. Public Health 2016, 13, 417. https://doi.org/10.3390/ijerph13040417
Lauterstein DE, Tijerina PB, Corbett K, Akgol Oksuz B, Shen SS, Gordon T, Klein CB, Zelikoff JT. Frontal Cortex Transcriptome Analysis of Mice Exposed to Electronic Cigarettes During Early Life Stages. International Journal of Environmental Research and Public Health. 2016; 13(4):417. https://doi.org/10.3390/ijerph13040417
Chicago/Turabian StyleLauterstein, Dana E., Pamella B. Tijerina, Kevin Corbett, Betul Akgol Oksuz, Steven S. Shen, Terry Gordon, Catherine B. Klein, and Judith T. Zelikoff. 2016. "Frontal Cortex Transcriptome Analysis of Mice Exposed to Electronic Cigarettes During Early Life Stages" International Journal of Environmental Research and Public Health 13, no. 4: 417. https://doi.org/10.3390/ijerph13040417
APA StyleLauterstein, D. E., Tijerina, P. B., Corbett, K., Akgol Oksuz, B., Shen, S. S., Gordon, T., Klein, C. B., & Zelikoff, J. T. (2016). Frontal Cortex Transcriptome Analysis of Mice Exposed to Electronic Cigarettes During Early Life Stages. International Journal of Environmental Research and Public Health, 13(4), 417. https://doi.org/10.3390/ijerph13040417