Transmission Dynamics of SARS-CoV-2 during an Outbreak in a Roma Community in Thessaly, Greece—Control Measures and Lessons Learned
Abstract
:1. Introduction
2. Methods
2.1. Outbreak Setting—The Settlement of “Nea Smirni”
2.2. Outbreak Investigation and Management
- Household Index Case: The first laboratory-confirmed case in the household. When two or more household members were found positive simultaneously, no index case was attributed to the household.
- Household Secondary Contact: Any person residing in the same house/apartment with a Household Index Case.
- Household Secondary Case: A household secondary contact who was found PCR positive.
- Household Secondary Attack Rate (SAR): The proportion of household secondary cases to the total number of secondary contacts within the household.
2.3. Sampling and Laboratory Analysis
2.4. Data Management and Statistical Analysis
3. Results
3.1. Outbreak Evolution and Control
3.2. Population Characteristics, Distribution of Confirmed Cases and Parameters Associated with Disease Severity
3.3. Household Transmission and Secondary Attack Rates
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Age Group | PCR Positives | Symptomatic Cases | Required Hospitalization | Total Tested | SARS-CoV-2 Detection Frequency (95% CI) | Proportion of Symptomatic Cases (95% CI) | Hospitalization Proportion (95% CI) |
---|---|---|---|---|---|---|---|
0–12 years | 36 | 6 | 1 | 284 | 12.68% (9.04–17.11%) | 16.67% (6.37–32.81%) | 2.78% (0.07–14.53%) |
13–19 years | 28 | 7 | 2 | 175 | 16.00% (10.90–22.23%) | 25.00% (10.69–44.87%) | 7.14% (0.88–23.50%) |
20–39 years | 48 | 20 | 6 | 520 | 9.23% (6.88–12.05%) | 41.67% (27.61–56.79%) | 12.50% (4.73–25.25%) |
40–59 years | 19 | 12 | 8 | 479 | 3.97% (2.41–6.13%) | 63.16% (38.36–83.71%) | 42.11% (20.25–66.50%) |
>60 years | 11 | 7 | 3 | 304 | 3.62% (1.82–6.38%) | 63.64% (30.79–89.07%) | 27.27% (6.02–60.97%) |
Total | 142 | 52 | 20 | 1762 | 8.06% (6.83–9.43%) | 36.62% (28.70–45.11%) | 14.08% (8.82–20.91%) |
Characteristic | Index Cases (n = 30) | Secondary Cases (n = 72) | Non Categorized Cases (n = 33) | Non-infected Household Contacts (n = 151) | Secondary Attack Rate | Relative Risk (95% CI) | p-Value (Chi-Square) | |
---|---|---|---|---|---|---|---|---|
Age group | ≥60 years | 4 | 5 | 1 | 8 | 38.46% (13.86–68.42%) | 1.21 (0.57–2.58) | 0.623 |
40–59 years | 5 | 9 | 2 | 26 | 25.71% (12.49–43.26%) | 0.81 (0.42–1.54) | 0.511 | |
20–39 years | 12 | 21 | 12 | 39 | 35.00% (23.13–48.40%) | 1.10 (0.69–1.76) | 0.683 | |
13–19 years | 6 | 10 | 12 | 20 | 33.33% (17.29–52.81%) | 1.05 (0.58–1.90) | 0.874 | |
≤12 years | 3 | 27 | 6 | 58 | 31.76% (22.08–42.76%) | reference | reference | |
Gender | male | 22 | 33 | 15 | 67 | 33.00% (23.92–43.12%) | 1.04 (0.71–1.52) | 0.837 |
female | 8 | 39 | 18 | 84 | 31.71% (23.61–40.71%) | reference | reference | |
Household size | >6 members | 13 | 64 | 31 | 107 | 37.43% (30.16–45.14%) | 2.43 (1.25–4.76) | 0.003 |
≤6 members | 17 | 8 | 2 | 44 | 15.38% (6.88–28.08%) | reference | reference |
Index Case Characteristics | Secondary Cases/Contacts | Secondary Attack Rate (95% CI) | Relative Risk (95% CI) | p-Value | |
---|---|---|---|---|---|
Age group | ≥60 years | 6/16 | 37.5% (15.20–64.57%) | 5.62 (0.76–41.41) | 0.083 2 |
40–59 years | 12/39 | 30.77% (17.02–47.57%) | 4.61 (0.66–32.48) | 0.083 2 | |
20–39 years | 32/69 | 46.38% (34.28–58.80%) | 6.96 (1.03–47.00) | 0.003 2 | |
13–19 years | 11/25 | 44% (24.40–65.07%) | 6.60 (0.94–46.13) | 0.015 2 | |
≤12 years | 1/15 | 6.67% (0.17–31.95%) | reference | reference | |
Gender | male | 45/122 | 36.88% (28.33–46.09%) | 0.91 (0.59–1.41 | 0.679 1 |
female | 17/42 | 40.48% (25.63–56.72%) | reference | reference | |
Disease severity | Required hospitalization | 38/84 | 45.24% (34.34–56.48%) | 15.83 (2.62–110.84) | <0.001 2 |
Symptomatic (not requiring hospitalization) | 23/45 | 51.11% (35.77–66.30%) | 17.89 (2.54–126.09) | <0.001 2 | |
Asymptomatic | 1/35 | 2.86% (0.07–14.92%) | reference | reference | |
Viral load * | High | 39/98 | 39.8% (30.04–50.18%) | 1.22 (0.76–1.95) | 0.399 1 |
Low | 16/49 | 32.65% (19.95–47.54%) | reference | reference |
Risk Factor | Odds Ratio (95% CI) | p-Value | |
---|---|---|---|
Index case’s age group | ≥60 years | 1.14 (0.07–18.46) | 0.927 |
40–59 years | 0.42 (0.03–6.15) | 0.530 | |
20–39 years | 1.14 (0.09–14.23) | 0.918 | |
13–19 years | 2.15 (0.16–29.5) | 0.566 | |
≤12 years | reference | reference | |
Index case’s disease severity | Required hospitalization | 27.20 (2.39–309.70) | 0.008 |
Symptomatic (not requiring hospitalization) | 23.68 (2.21–253.74) | 0.009 | |
Asymptomatic | reference | reference | |
Household size | >6 members | 2.65 (1.00–7.07) | 0.051 |
≤6 members | reference | reference | |
Gender | Male | 1.040 (0.50–2.15) | 0.916 |
Female | reference | reference | |
Age (continuous) | 1.005 (0.987–1.024) | 0.606 | |
Nagelkerke R2 | 0.310 |
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Koureas, M.; Speletas, M.; Bogogiannidou, Z.; Babalis, D.; Pinakas, V.; Pinaka, O.; Komnos, A.; Tsoutsa, S.; Papadamou, G.; Kyritsi, M.A.; et al. Transmission Dynamics of SARS-CoV-2 during an Outbreak in a Roma Community in Thessaly, Greece—Control Measures and Lessons Learned. Int. J. Environ. Res. Public Health 2021, 18, 2878. https://doi.org/10.3390/ijerph18062878
Koureas M, Speletas M, Bogogiannidou Z, Babalis D, Pinakas V, Pinaka O, Komnos A, Tsoutsa S, Papadamou G, Kyritsi MA, et al. Transmission Dynamics of SARS-CoV-2 during an Outbreak in a Roma Community in Thessaly, Greece—Control Measures and Lessons Learned. International Journal of Environmental Research and Public Health. 2021; 18(6):2878. https://doi.org/10.3390/ijerph18062878
Chicago/Turabian StyleKoureas, Michalis, Matthaios Speletas, Zacharoula Bogogiannidou, Dimitris Babalis, Vassilios Pinakas, Ourania Pinaka, Apostolos Komnos, Stella Tsoutsa, Georgia Papadamou, Maria A. Kyritsi, and et al. 2021. "Transmission Dynamics of SARS-CoV-2 during an Outbreak in a Roma Community in Thessaly, Greece—Control Measures and Lessons Learned" International Journal of Environmental Research and Public Health 18, no. 6: 2878. https://doi.org/10.3390/ijerph18062878
APA StyleKoureas, M., Speletas, M., Bogogiannidou, Z., Babalis, D., Pinakas, V., Pinaka, O., Komnos, A., Tsoutsa, S., Papadamou, G., Kyritsi, M. A., Vontas, A., Nakoulas, V., Sapounas, S., Kanellopoulos, N., Kalompatsios, D., Papadouli, V., Dadouli, K., Soteriades, S., Mina, P., ... Hadjichristodoulou, C. (2021). Transmission Dynamics of SARS-CoV-2 during an Outbreak in a Roma Community in Thessaly, Greece—Control Measures and Lessons Learned. International Journal of Environmental Research and Public Health, 18(6), 2878. https://doi.org/10.3390/ijerph18062878