Combining High Yields and Blast Resistance in Rice (Oryza spp.): A Screening under Upland and Lowland Conditions in Benin
Abstract
:1. Introduction
2. Materials and Methods
2.1. Plant Materials
2.2. Field Trials for Agronomic Evaluation
2.3. Data Collection
2.4. Statistical Analysis
3. Results
3.1. Phenotypic Variability for 15 Agronomic Measured Traits
3.2. Performance Evaluation of 42 Rice Accessions and 7 Reference Varieties for Yield and Yield Components in Upland Conditions
3.3. Performance Evaluation of 37 Rice Accessions and 7 Reference Varieties for Yield and Yield Components in Lowland Conditions
3.4. Grain Yield Performance of the Rice Accessions in Lowland and Upland Agro-Ecology
3.5. Relationships of Yield Components with Blast Resistance and Genetic Population Diversity
4. Discussion
5. Conclusions
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
Appendix A
S/N | Accessions Number | Accession Name | Species Name | Country of Origin | Blast Resistance Pattern * |
---|---|---|---|---|---|
1 | WAB0015772 | BEN11-126-A | O. sativa | Benin | Resistant |
2 | WAB0006684 | BEN11-45 | O. sativa | Benin | Resistant |
3 | WAB0035038 | BEN11-84-A | O. sativa | Benin | Resistant |
4 | WAB0035055 | BEN11-90-A | O. sativa | Benin | Resistant |
5 | WAB0035059 | BEN11-71-A | O. sativa | Benin | Resistant |
6 | WAB0029182 | DION KIVO | O. glaberrima | Mali | Resistant |
7 | WAB0029335 | ISSABGO | O. glaberrima | Nigeria | Moderately resistant |
8 | WAB0030263 | MACINA-B | O. glaberrima | Nigeria | Susceptible |
9 | WAB0023837 | RAM 100 | O. glaberrima | Mali | Resistant |
10 | WAB0024105 | RAM 131 | O. glaberrima | Mali | Resistant |
11 | WAB0024116 | RAM 154 | O. glaberrima | Mali | Resistant |
12 | WAB0029194 | TIERO OUSSI DIOUBOU KOUNTI | O. glaberrima | Mali | Resistant |
13 | WAB0032487 | TIOLY | O. glaberrima | Mali | Moderately resistant |
14 | WAB0032298 | TIRO SI DIOUMDOU | O. glaberrima | Mali | Resistant |
15 | WAB0008589 | TOG 5380 | O. glaberrima | Nigeria | Moderately resistant |
16 | WAB0020477 | TOG 5392 | O. glaberrima | Nigeria | Moderately resistant |
17 | WAB0032397 | TOG 5439-C | O. glaberrima | Nigeria | Resistant |
18 | WAB0029323 | TOG 5480 | O. glaberrima | Nigeria | Moderately resistant |
19 | WAB0029333 | TOG 5509 | O. glaberrima | Nigeria | Moderately resistant |
20 | WAB0019882 | TOG 5538 | O. glaberrima | Nigeria | Resistant |
21 | WAB0029315 | TOG 5673 | O. glaberrima | Nigeria | Moderately resistant |
22 | WAB0020505 | TOG 5693 | O. glaberrima | Nigeria | Moderately susceptible |
23 | WAB0032497 | TOG 5786-A | O. glaberrima | Liberia | Resistant |
24 | WAB0015703 | TOG 5951 | O. glaberrima | Nigeria | Resistant |
25 | WAB0001360 | TOG 5978 | O. glaberrima | Nigeria | Susceptible |
26 | WAB0029342 | TOG 6029 | O. glaberrima | Nigeria | Susceptible |
27 | WAB0032230 | TOG 6142-A | O. glaberrima | Nigeria | Susceptible |
28 | WAB0008937 | TOG 6201 | O. glaberrima | Guinea | Resistant |
29 | WAB0032848 | TOG 6228-A | O. glaberrima | Mali | Resistant |
30 | WAB0032550 | TOG 6804-A | O. glaberrima | Nigeria | Resistant |
31 | WAB0026783 | TOG 7106 | O. glaberrima | Mali | Resistant |
32 | WAB0002093 | TOG 7183 | O. glaberrima | Mali | Moderately resistant |
33 | WAB0002136 | TOG 7232 | O. glaberrima | Mali | Resistant |
34 | WAB0002143 | TOG 7239 | O. glaberrima | Mali | Resistant |
35 | WAB0002145 | TOG 7243 | O. glaberrima | Mali | Moderately susceptible |
36 | WAB0032345 | TOG 7250-A | O. glaberrima | Mali | Moderately resistant |
37 | WAB0009280 | TOG 7393 | O. glaberrima | Nigeria | Moderately susceptible |
38 | WAB0015043 | TOS 16746 | O. glaberrima | Ivory Coast | Resistant |
39 | WAB0026176 | TOS 6447 | O. glaberrima | Mali | Resistant |
40 | WAB0032495 | TOS 6454-A | O. glaberrima | Liberia | Resistant |
41 | WAB0008956 | TOS 6457 | O. glaberrima | Liberia | Resistant |
42 | WAB0032394 | W 1032 | O. glaberrima | Nigeria | Resistant |
Traits | Codes Used | Description |
---|---|---|
Total number of tillers/plant | Tillers_Total | Counted number of tillers at the maturity stage |
Number of fertile tillers/plant | Tillers_Fertile | Counted fertile tillers at the maturity stage |
Percentage of fertile tillers/plant | % Fertile_Tillers | Calculated in Excel |
Panicle length | Length_Pan | Measured from the base of the lowest spikelet to the tip of the latest spikelet on the panicle, excluding awn |
Plant height at maturity (cm) | Plant_height | Measured height from the base of the plant to the top of the latest spikelet on the panicle, excluding awn |
Total number of spikelets/panicle | Spikelets_TotalNum | Counted total number of grains in sampled panicles |
Number of filled spikelets/panicle | Filled_Spikelets | Counted filled grains in sampled panicles |
Percentage of filled spikelets | % Fertile_Spikelets | Calculated in Excel |
Number of primary branching | Ram_Iaire | Counted number of primary branches of the panicle |
Number of secondary branching | Ram_IIaire | Counted number of secondary branches of the panicle |
Ratio secondary branching/primary branching | Ratio_RamIIRamIaire | Calculated in Excel |
Total number of panicles/m2 | Panicules_Num | Counted the number of panicles per square meter |
Number of days to 80% flowering | Number of days to 80% flowering (CSE) | Recorded the number of days from effective seeding to 80% heading |
Number of days to 80% maturity | Number of days to 80% maturity (CSM) | Recorded the number of days from effective seeding to 80% maturity |
Grain yield (g/36 plants) | Yield | Harvested a square meter (1 m × 1 m) of each plot |
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Trait | Lowland | Upland | ||||
---|---|---|---|---|---|---|
Access. (df = 48) | Rep. (df = 2) | Error (df = 96) | Access (df = 44) | Rep. (df = 2) | Error (df = 88) | |
Tillers_Total | 19 *** | 9.99 * | 2.84 | 35 *** | 4.92 | 1.85 |
Tillers_Fertile | 19 *** | 9.65 * | 2.98 | 34 *** | 3.59 | 2.29 |
%Fertile_Tillers | 36.45 *** | 33.91 | 17.04 | 46.19 | 4.93 | 33.20 |
Length_Pan | 37 *** | 31.31 | 16.53 | 17 *** | 1.48 | 1.22 |
Plant_Height | 444 *** | 419.70 *** | 44.39 | 238 *** | 5.14 | 21.20 |
Spikelets_TotalNum | 2180 *** | 313.1 | 233.8 | 2368 *** | 17.43 | 85.67 |
Filled_Spikelets | 1804 *** | 93.39 | 248.77 | 2110 *** | 262.20 | 143.5 |
%Fertile_Spikelets | 49.96 *** | 77.71 * | 16.69 | 355.37 *** | 246.43 ** | 37.45 |
Ram_Iaire | 18 *** | 8.72 | 4.85 | 8 *** | 0.15 | 0.70 |
Ram_IIaire | 197 *** | 4.88 | 16.38 | 184 *** | 9.64 | 8.15 |
Ratio_RamIIRamIaire | 1.88 *** | 0.14 | 0.19 | 1.69 *** | 0.05 | 0.05 |
Panicules_Num | 34,223 *** | 8434 | 3348 | 31,117 *** | 503.1 | 2141.7 |
FLW | 440 *** | 36.33 | 12.16 | 1150 *** | 9.64 | 9.77 |
MAT | 475 *** | 36.18 | 12.20 | 961 *** | 3.11 | 13.48 |
Yield | 42,975 *** | 16,730 | 11,962 | 62,184 *** | 8141 | 5963 |
Trait | Lowland | Upland | p-Value | ||||
---|---|---|---|---|---|---|---|
Min. | Max. | Std. | Min. | Max. | SD | ||
Tillers_Total | 5 | 20 | 2.89 | 3 | 21 | 3.56 | 0.4125 |
Tillers_Fertile | 5 | 20 | 2.88 | 3 | 21 | 3.56 | 0.8075 |
%Fertile_Tillers | 61.45 | 100.00 | 4.86 | 60.98 | 100.00 | 5.97 | 0.001 ** |
Long_Pan | 15 | 69 | 4.85 | 18 | 30 | 2.52 | 0.8641 |
Plant_Height | 76 | 134 | 13.46 | 82 | 135 | 9.60 | 0.5462 |
Spikelets_TotalNumber | 54 | 185 | 29.57 | 62 | 193 | 28.90 | 0.0001 *** |
Filled_Spikelets | 51 | 172 | 27.51 | 35 | 163 | 28.14 | 0.1483 |
%Fertile_Spikelets | 72.21 | 98.65 | 5.34 | 29.42 | 98.82 | 12.03 | 0.0000 *** |
Ram_Iaire | 4 | 29 | 3.02 | 6 | 16 | 1.75 | 0.1866 |
Ram_IIaire | 1 | 39 | 8.70 | 2 | 40 | 8.13 | 0.0039 ** |
Ratio_RamIIRamIaire | 0.02 | 3.35 | 0.86 | 0.16 | 3.20 | 0.77 | 0.0518 |
Panicules_Num | 105 | 714 | 117.16 | 114 | 590 | 107.91 | 0.9754 |
FLW | 75 | 136 | 12.63 | 64 | 156 | 19.74 | 0.0071 ** |
MAT | 94 | 155 | 13.10 | 86 | 173 | 18.03 | 0.0208 * |
Yield | 96 | 783 | 158.01 | 31 | 869 | 159.92 | 0.0002 *** |
Traits | %Fertile_Tillers | Spikelets_TotalNumber | %Fertile Spikelets | Ram_IIaire | FLW | MAT | Yield |
---|---|---|---|---|---|---|---|
%Fertile_Tillers | 0.01 | −0.17 | −0.04 | 0.21 | 0.19 | −0.27 | |
Spikelets_TotalNumber | 0.03 | −0.09 | 0.69 * | 0.01 | −0.01 | 0.09 | |
%Fertile Spikelets | 0.12 | −0.12 | −0.03 | −0.70 * | −0.69 | 0.57 * | |
Ram_IIaire | −0.16 | 0.61 * | −0.17 | −0.15 | −0.10 | 0.27 | |
FLW | 0.16 | 0.17 | −0.41 * | −0.23 | 0.96 * | −0.52 * | |
MAT | 0.1 | 0.12 | −0.44 * | −0.22 | 0.94 * | −0.49 * | |
Yield | 0.17 | 0.08 | 0.06 | 0.24 | −0.05 | −0.03 |
Ecology | Upland | Lowland | |||
---|---|---|---|---|---|
Traits | PCA 1 | PCA 2 | PCA 1 | PCA 2 | PCA 3 |
%Fertile_Tillers | −0.20 | −0.11 | −0.74 * | ||
Spikelets_TotalNumber | 0.69 * | 0.11 | 0.62 * | −0.07 | |
%Fertile Spikelets | 0.47 * | 0.17 | −0.40 * | −0.22 | −0.32 |
Ram_IIaire | 0.13 | 0.69 * | −0.13 | 0.70 * | 0.06 |
FLW | −0.53 * | 0.63 * | −0.08 | ||
MAT | −0.52 * | 0.63 * | −0.04 | ||
Yield | 0.42 * | 0.11 | 0.26 | −0.58 * |
Upland | Lowland | |||||||
---|---|---|---|---|---|---|---|---|
Accessions | Species | Grain Yield | MAT | Rank | Grain Yield | MAT | Rank | Presumed Ecology |
WAB0015772 | SATIVA | 257.35 a* | 172.33 a | 30 | 489.26 b | 140 b | 14 | Lowland |
WAB0006684 | SATIVA | 319.56 a | 95.33 a | 25 | 168.46 a | 99 b | 35 | Upland |
WAB0035055 | SATIVA | 494.39 a | 126 a | 5 | 569.18 a | 107.67 b | 4 | BOTH |
WAB0035059 | SATIVA | 669.49 a | 124.67 a | 1 | 498.34 b | 107.67 b | 12 | Upland |
WAB0029182 | GLA | 573.59 a | 117.33 a | 3 | 510.32 a | 108 b | 11 | BOTH |
WAB0029335 | GLA | 338.57 a | 132.67 a | 21 | 474.73 a | 118.67 b | 16 | BOTH |
WAB0030263 | GLA | 327.22 a | 103 a | 23 | 168.28 a | 94 b | 36 | Upland |
WAB0023837 | GLA | 395.73 a | 134.67 a | 13 | 555.75 a | 125.67 b | 6 | BOTH |
WAB0024105 | GLA | 100.09 a | 140 a | 35 | 358.15 b | 145 a | 27 | Lowland |
WAB0024116 | GLA | 322.16 a | 157 a | 24 | 421.12 a | 135 b | 25 | Lowland |
WAB0029194 | GLA | 603.35 a | 129.67 a | 2 | 476.51 a | 128.33 a | 15 | BOTH |
WAB0032487 | GLA | 190.69 a | 168.33 a | 33 | 258.56 a | 151.67 b | 34 | Lowland |
WAB0032298 | GLA | 371.9 a | 132 a | 17 | 343.35 a | 126 a | 29 | BOTH |
WAB0008589 | GLA | 409.93 a | 123.67 a | 12 | 471.15 a | 117.33 b | 18 | BOTH |
WAB0020477 | GLA | 425.17 a | 127.33 a | 9 | 295.3 a | 120.67 b | 32 | Upland |
WAB0029323 | GLA | 363.39 a | 137.67 a | 19 | 427.34 a | 127.33 a | 24 | BOTH |
WAB0019882 | GLA | 212.5 a | 135.33 a | 32 | 567.78 b | 127 b | 5 | Lowland |
WAB0029315 | GLA | 259.95 a | 131.33 a | 29 | 493.8 b | 122 a | 13 | Lowland |
WAB0020505 | GLA | 269.31 a | 133.33 a | 26 | 430.31 a | 135.67 a | 21 | BOTH |
WAB0032497 | GLA | 469.19 a | 129.67 a | 8 | 446.11 a | 129 a | 20 | BOTH |
WAB0015703 | GLA | 374.68 a | 115 a | 16 | 526.31 b | 112.67 a | 8 | Lowland |
WAB0001360 | GLA | 411.85 a | 131 a | 10 | 427.65 a | 124 b | 23 | BOTH |
WAB0029342 | GLA | 365.09 a | 132 a | 18 | 644.95 b | 135 a | 2 | Lowland |
WAB0008937 | GLA | 491.98 a | 123.67 a | 6 | 536.48 a | 107.67 b | 7 | BOTH |
WAB0032848 | GLA | 268.96 a | 138.33 a | 27 | 260.76 a | 136 a | 33 | BOTH |
WAB0032550 | GLA | 220.5 a | 125 a | 31 | 318.77 a | 120 a | 31 | BOTH |
WAB0002093 | GLA | 98.18 a | 150.67 a | 36 | 333 b | 150 a | 30 | Lowland |
WAB0002136 | GLA | 103.2 a | 147.33 a | 34 | 155.56 a | 143 b | 37 | BOTH |
WAB0002143 | GLA | 540.5 a | 112.67 a | 4 | 358.03 b | 111.33 a | 28 | Upland |
WAB0002145 | GLA | 263.51 a | 147.33 a | 28 | 454.26 a | 140 b | 19 | Lowland |
WAB0032345 | GLA | 333.42 a | 125.67 a | 22 | 512.78 a | 117.33 b | 9 | BOTH |
WAB0009280 | GLA | 348.65 a | 122.67 a | 20 | 510.61 b | 126.5 a | 10 | Lowland |
WAB0015043 | GLA | 410.95 a | 126.33 a | 11 | 600.05 a | 127 a | 3 | BOTH |
WAB0026176 | GLA | 375.64 a | 125.33 a | 15 | 429.71 a | 120.67 a | 22 | BOTH |
WAB0032495 | GLA | 389.67 a | 127.33 a | 14 | 413.82 a | 125.67 a | 26 | BOTH |
WAB0008956 | GLA | 469.41 a | 132 a | 7 | 698.9 b | 124 b | 1 | Lowland |
WAB0032394 | GLA | 51.07 a | 169.67 a | 37 | 471.73 b | 143 b | 17 | Lowland |
WAB0035038 | SATIVA | 717.18 | 134.67 | - | - | - | - | Upland |
WAB0029333 | GLA | 238.42 | 125.33 | - | - | - | - | - |
WAB0032230 | GLA | 50.63 | 146 | - | - | - | - | - |
WAB0032397 | GLA | 346.98 | 129.67 | - | - | - | - | - |
WAB0026783 | GLA | 270.22 | 152.33 | - | - | - | - | - |
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Yelome, O.I.; Audenaert, K.; Landschoot, S.; Dansi, A.; Vanhove, W.; Silue, D.; Damme, P.V.; Haesaert, G. Combining High Yields and Blast Resistance in Rice (Oryza spp.): A Screening under Upland and Lowland Conditions in Benin. Sustainability 2018, 10, 2500. https://doi.org/10.3390/su10072500
Yelome OI, Audenaert K, Landschoot S, Dansi A, Vanhove W, Silue D, Damme PV, Haesaert G. Combining High Yields and Blast Resistance in Rice (Oryza spp.): A Screening under Upland and Lowland Conditions in Benin. Sustainability. 2018; 10(7):2500. https://doi.org/10.3390/su10072500
Chicago/Turabian StyleYelome, Octaviano Igor, Kris Audenaert, Sofie Landschoot, Alexandre Dansi, Wouter Vanhove, Drissa Silue, Patrick Van Damme, and Geert Haesaert. 2018. "Combining High Yields and Blast Resistance in Rice (Oryza spp.): A Screening under Upland and Lowland Conditions in Benin" Sustainability 10, no. 7: 2500. https://doi.org/10.3390/su10072500
APA StyleYelome, O. I., Audenaert, K., Landschoot, S., Dansi, A., Vanhove, W., Silue, D., Damme, P. V., & Haesaert, G. (2018). Combining High Yields and Blast Resistance in Rice (Oryza spp.): A Screening under Upland and Lowland Conditions in Benin. Sustainability, 10(7), 2500. https://doi.org/10.3390/su10072500