The Impact of Patient Characteristics and Tumor Biology on the Accuracy of Preoperative Staging of Colon Cancer in Denmark. A Nationwide Cohort Study
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Design and Data Sources
2.2. Data Collection
2.3. Diagnostic Tests
2.4. Data Analysis
2.5. Statistical Analysis
3. Results
3.1. Patients and Tumor Characteristics
3.2. FPR, FNR, FDR and FOR
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Characteristic | Quantity | Missing (%) |
---|---|---|
Age (median, range) | 72 (23–97) | |
Sex (n, %) | ||
Female | 2941 (48%) | |
Male | 3161 (52%) | |
BMI (kg/m2) (median, IQR) | 26 (23–29) | 118 (2%) * |
Charlson score (CCI) | ||
0 (n, %) | 2728 (45%) | |
1 | 858 (14%) | |
2 | 1526 (25%) | |
3+ | 990 (16%) | |
Tumor side | ||
Right (n, %) | 3610 (59%) | |
Left | 2441 (40%) | |
Transition | 51 (1%) | |
Preoperative clinical T-category (cT) | 947 (16%) | |
cT0 (n, % of non-missing) | 66 (1%) | |
cT1 | 444 (9%) | |
cT2 | 1760 (34%) | |
cT3 | 2413 (47%) | |
cT4 | 472 (9%) | |
Preoperative clinical N-category (cN) | 838 (14%) | |
cN0 (n, % of non-missing) | 3067 (58%) | |
cN1 | 1472 (28%) | |
cN2 | 725 (14%) | |
Histopathology | 3 (0%) | |
Adenocarcinoma NOS (n, % of non-missing) | 4899 (80%) | |
Low differentiated carcinoma | 394 (6%) | |
Mucinous carcinoma | 692 (11%) | |
Other ** | 114 (2%) | |
MMR status | 199 (3%) | |
Deficient (dMMR) (n, % of non-missing) | 1425 (24%) | |
Proficient (pMMR) | 4478 (76%) |
Measure | Calculated | 95% CI * | |
---|---|---|---|
T-Category (T0–2 vs. T3–4)—All Patients | |||
Sensitivity | 0.68 | 0.66 | 0.69 |
Specificity | 0.78 | 0.76 | 0.80 |
PPV | 0.90 | 0.89 | 0.91 |
NPV | 0.46 | 0.44 | 0.48 |
FPR | 0.22 | 0.20 | 0.24 |
FNR | 0.32 | 0.31 | 0.34 |
FDR | 0.10 | 0.09 | 0.11 |
FOR | 0.54 | 0.52 | 0.56 |
N-category (N0 vs. N+)—All Patients | |||
Sensitivity | 0.55 | 0.53 | 0.57 |
Specificity | 0.66 | 0.64 | 0.67 |
PPV | 0.47 | 0.45 | 0.49 |
NPV | 0.72 | 0.71 | 0.74 |
FPR | 0.34 | 0.33 | 0.36 |
FNR | 0.45 | 0.43 | 0.47 |
FDR | 0.53 | 0.51 | 0.55 |
FOR | 0.28 | 0.26 | 0.29 |
Variable | OR * | p | 95% CI ** | |
---|---|---|---|---|
T-category—false positive rate | ||||
Age | 1.0179 | 0.014 | 1.0036 | 1.0324 |
Sex | 1.0043 | 0.974 | 0.7758 | 1.3000 |
BMI | 0.9877 | 0.371 | 0.9612 | 1.0149 |
Comorbidity (+/−) | 0.9007 | 0.430 | 0.6948 | 1.1676 |
Comorbidity (cont) | 0.9664 | 0.447 | 0.8848 | 1.0554 |
MDT meeting | 0.8558 | 0.298 | 0.6385 | 1.1473 |
Side (left vs. right) | 0.8546 | 0.239 | 0.6577 | 1.1103 |
Histopathology | ||||
-Adenocarcinoma NOS | 1 (reference) | |||
-Low differentiated | 1.2222 | 0.541 | 0.6427 | 2.3244 |
-Mucinous | 1.6667 | 0.554 | 0.7004 | 1.9432 |
-Other | 3.6667 | 0.025 | 1.1726 | 11.4651 |
dMMR *** | 1.3334 | 0.425 | 0.8833 | 1.5415 |
T-category—false negative rate | ||||
Age | 0.9958 | 0.208 | 0.9893 | 1.0023 |
Sex | 1.1145 | 0.120 | 0.9721 | 1.2777 |
BMI | 1.0090 | 0.205 | 0.9951 | 1.0231 |
Comorbidity (+/−) | 1.1446 | 0.054 | 0.9975 | 1.3135 |
Comorbidity (cont) | 1.0560 | 0.015 | 1.0105 | 1.1036 |
MDT meeting | 1.0608 | 0.502 | 0.8929 | 1.2602 |
Side (left vs. right) | 1.0338 | 0.646 | 0.8972 | 1.1912 |
Histopathology | ||||
-Adenocarcinoma NOS | 1 (reference) | |||
-Low differentiated | 0.4717 | <0.001 | 0.3492 | 0.6374 |
-Mucinous | 1.0762 | 0.472 | 0.8812 | 1.3144 |
-Other | 0.6848 | 0.138 | 0.4150 | 1.1300 |
dMMR *** | 0.6582 | <0.001 | 0.5569 | 0.7779 |
N-category—false positive rate | ||||
Age | 1.0025 | 0.492 | 0.9953 | 1.0098 |
Sex | 0.8387 | 0.015 | 0.7276 | 0.9668 |
BMI | 0.9955 | 0.554 | 0.9809 | 1.0104 |
Comorbidity (+/−) | 0.7960 | 0.002 | 0.6902 | 0.9182 |
Comorbidity (cont) | 0.9164 | <0.001 | 0.8730 | 0.9618 |
MDT meeting | 0.8546 | 0.068 | 0.7218 | 1.0120 |
Side (left vs. right) | 0.5776 | <0.001 | 0.4971 | 0.6711 |
Histopathology | ||||
-Adenocarcinoma NOS | 1 (reference) | |||
-Low differentiated | 1.8784 | <0.001 | 1.3637 | 2.5875 |
-Mucinous | 1.4181 | 0.002 | 1.1377 | 1.7676 |
-Other | 2.1560 | 0.006 | 1.2510 | 3.7158 |
dMMR *** | 1.7209 | <0.001 | 1.4689 | 2.0161 |
N-category—false negative rate | ||||
Age | 0.9942 | 0.194 | 0.9855 | 1.0030 |
Sex | 1.0800 | 0.408 | 0.8998 | 1.2963 |
BMI | 1.0069 | 0.459 | 0.9887 | 1.0254 |
Comorbidity (+/−) | 1.1980 | 0.053 | 0.9973 | 1.4390 |
Comorbidity (cont) | 1.0727 | 0.021 | 1.0106 | 1.1388 |
MDT meeting | 1.2431 | 0.066 | 0.9856 | 1.5679 |
Side (left vs. right) | 2.1859 | <0.001 | 1.8088 | 2.6416 |
Histopathology | ||||
-Adenocarcinoma NOS | 1 (reference) | |||
-Low differentiated | 0.4651 | <0.001 | 0.3316 | 0.6523 |
-Mucinous | 0.6493 | 0.005 | 0.4806 | 0.8773 |
-Other | 0.7473 | 0.349 | 0.4061 | 1.3750 |
dMMR *** | 0.5954 | <0.001 | 0.4646 | 0.7630 |
Category | Diagnostic Test vs. Gold Standard | Rate of Faulty Preoperative Staging | ||
---|---|---|---|---|
T3–4 vs. T0–2 | ||||
False positive rate (=1-specificity) | False discovery rate (=1-PPV) | |||
(Percent, with 95% CI in parentheses) | (Percent, with 95% CI in parentheses) | |||
Tumor location | pMMR * | dMMR ** | pMMR | dMMR |
Left-sided | 21% (18–25%) | 11% (3–27%) | 12% (10–14%) | 8% (2–19%) |
(n = 559) | (n = 35) | (n = 987) | (n = 52) | |
Right-sided | 22% (18–26%) | 25% (20–31%) | 10% (8–12%) | 9% (7–12%) |
(n = 441) | (n = 255) | (n = 1021) | (n = 695) | |
False negative rate (=1-sensitivity) | False omission rate (=1-NPV) | |||
(Percent, with 95% CI in parentheses) | (Percent, with 95% CI in parentheses) | |||
Tumor location | pMMR | dMMR | pMMR | dMMR |
Left-sided | 33% (30–35%) | 23% (13–35%) | 49% (46–52%) | 31% (18–47%) |
(n = 1295) | (n = 62) | (n = 867) | (n = 45) | |
Right-sided | 36% (33–38%) | 26% (23–29%) | 60% (56–63%) | 54% (49–59%) |
(n = 1434) | (n = 853) | (n = 854) | (n = 413) | |
N+ vs. N0 | ||||
False positive rate (=1-specificity) | False discovery rate (=1-PPV) | |||
(Percent, with 95% CI in parentheses) | (Percent, with 95% CI in parentheses) | |||
Tumor location | pMMR | dMMR | pMMR | dMMR |
Left-sided | 27% (24–29%) | 36% (26–47%) | 52% (48–56%) | 77% (61–89%) |
(n = 1216) | (n = 84) | (n = 627) | (n = 39) | |
Right-sided | 35% (32–38%) | 44% (41–48%) | 46% (43–49%) | 64% (60–68%) |
(n = 1142) | (n = 801) | (n = 871) | (n = 558) | |
False negative rate (=1-sensitivity) | False omission rate (=1-NPV) | |||
(Percent, with 95% CI in parentheses) | (Percent, with 95% CI in parentheses) | |||
Tumor location | pMMR | dMMR | pMMR | dMMR |
Left-sided | 57% (53–61%) | 53% (29–76%) | 31% (28–33%) | 16% (8–27%) |
(n = 698) | (n = 19) | (n = 1287) | (n = 64) | |
Right-sided | 39% (36–43%) | 34% (29–40%) | 29% (27–32%) | 19% (16–22%) |
(n = 778) | (n = 306) | (n = 1049) | (n = 549) |
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Pedersen, M.R.V.; Rafaelsen, S.R.; Lindebjerg, J.; Hansen, T.F.; Rahr, H.B. The Impact of Patient Characteristics and Tumor Biology on the Accuracy of Preoperative Staging of Colon Cancer in Denmark. A Nationwide Cohort Study. Cancers 2021, 13, 4384. https://doi.org/10.3390/cancers13174384
Pedersen MRV, Rafaelsen SR, Lindebjerg J, Hansen TF, Rahr HB. The Impact of Patient Characteristics and Tumor Biology on the Accuracy of Preoperative Staging of Colon Cancer in Denmark. A Nationwide Cohort Study. Cancers. 2021; 13(17):4384. https://doi.org/10.3390/cancers13174384
Chicago/Turabian StylePedersen, Malene Roland V., Søren Rafael Rafaelsen, Jan Lindebjerg, Torben Frøstrup Hansen, and Hans Bjarke Rahr. 2021. "The Impact of Patient Characteristics and Tumor Biology on the Accuracy of Preoperative Staging of Colon Cancer in Denmark. A Nationwide Cohort Study" Cancers 13, no. 17: 4384. https://doi.org/10.3390/cancers13174384
APA StylePedersen, M. R. V., Rafaelsen, S. R., Lindebjerg, J., Hansen, T. F., & Rahr, H. B. (2021). The Impact of Patient Characteristics and Tumor Biology on the Accuracy of Preoperative Staging of Colon Cancer in Denmark. A Nationwide Cohort Study. Cancers, 13(17), 4384. https://doi.org/10.3390/cancers13174384