LINC00665: An Emerging Biomarker for Cancer Diagnostics and Therapeutics
Abstract
:1. Introduction
2. Aberrant Expression of LINC00665 in Human Tumors
3. Association of LINC00665 with Clinicopathological Characteristics
4. The Prognostic and Diagnostic Value of LINC00665
5. Signaling Pathways Associated with LINC00665 in Cancer
5.1. Wnt/β-Catenin Signaling Pathway
5.2. TGF-β Signaling Pathway
5.3. NF-κB Signaling Pathway
5.4. PI3K/AKT Signaling Pathway
5.5. MAPK Signaling Pathway
6. The ceRNA Network Centered on LINC00665
7. The Encoded Micro-Peptide of LINC00665 and the Protein-Coding Genes It Directly Targets
8. The Relationship between LINC00665 and the Efficacy of Anticancer Drugs
9. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Tumor Type | Assessed Cell Lines | Animals | Expression | Detection and Statistical Methods | Regulatory Mechanism | Effect In Vitro | Effect In Vivo | Ref. |
---|---|---|---|---|---|---|---|---|
Breast cancer | BC (MCF-7, MDA-MB-231, BT474, BT549, MDA-MB-468, and T47D); Normal (MCF-10A) | 10 SCID mice (5-week-old, female) | Upregulation | qRT-PCR; Student’s t-test | LINC00665/miR-379-5p/LIN28B | proliferation↑ migration↑ invasion↑ EMT↑ | tumor growth↑ | [10] |
BC (MCF-7, MDA-MB-231, ZR-75-30, and MDA-MB-415); Normal (MCF-10A) | - | Upregulation | TCGA RNA-seq and qRT-PCR; Independent sample t-test | - | proliferation↑ migration↑ invasion↑ EMT↑ | - | [11] | |
BC (MCF-7 and MDA-MB-231); Normal (MCF-10A) | - | Upregulation | qRT-PCR and GEPIA; Student’s t-test and ANOVA | LINC00665/miR-3619-5p/CTNNB1 | proliferation↑ migration↑ invasion↑ cell cycle↑ apoptosis↓ | - | [12] | |
- | - | Upregulation | TCGA RNA-seq and qRT-PCR; Student’s t-test and Chi-square test | - | cell cycle↑ DNA repair↑ | - | [9] | |
BC (MCF-7, MDA-MB-231, and HCC-1937); Normal (MCF-10A) | 12 BALB/c nude mice (4-week-old, female) | Upregulation | TCGA RNA-seq and qRT-PCR; Student’s t-test, ANOVA, and Tukey post hoc tests | LINC00665/miR-551b-5p | proliferation↑ apoptosis↓ | tumor growth↑ | [13] | |
Triple negative breast cancer | TNBC (BT549, Hs578T, and MDA-MB-231); Normal (MCF-10A and HEK293T) | 50 Nude mice (6–8-week-old, female) | Downregulation | qRT-PCR; two-tailed Student’s t-test | LINC00665/ CIP2A-BP/CIP2A | migration↓ invasion↓ | tumor growth↓ | [5] |
Prostate cancer | PC (LNCaP, PC-3, DU-145, and 22RV1); Normal (RWPE-1) | 10 BALB/c nude mice (4-week-old, female) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-1224-5p/SND1 | proliferation↑ migration↑ invasion↑ | tumor growth↑ | [14] |
PC (PC-3, DU-145, 22RV1, and LNCaP) | 10 Nude mice (8-week-old, male) | Upregulation | qRT-PCR; Student’s t-test | LINC00665/ EZH2, LSD1/KLF2 | proliferation↑ migration↑ | tumor growth↑ | [15] | |
PC (PC3) | - | Upregulation | TCGA RNA-seq and qRT-PCR; two-tailed Student’s t-test | - | DNA repair↑ radiosensitivity↓ | - | [16] | |
Ovarian cancer | OC (A2780, OVCAR3, CAOV3, and SKOV3); Normal (IOSE80) | - | Upregulation | qRT-PCR; Student’s t-test and Pearson correlation test | LINC00665/miR-34a-5p/E2F3 | proliferation↑ migration↑ invasion↑ | - | [17] |
- | - | Upregulation | TCGA RNA-seq and GTEx RNA-seq | LINC00665/ EDEM1, CAPNS1, SQSTM1, SERPINA1 | - | - | [18] | |
- | - | Upregulation | GEO RNA-seq | LINC00665/miR-146a-5p/CXCR4 | - | - | [44] | |
High-grade serous ovarian cancer | - | - | Upregulation | TCGA RNA-seq and GTEx RNA-seq | LINC00665/miR-449b-5p/RRAGD | - | - | [19] |
Cervical cancer | CA (HeLa) | 10 BALB/c immuno-deficient mice (female) | Upregulation | RNA-seq and qRT-PCR; ANOVA | LINC00665/ CTNNB1/(Wnt/β-catenin signaling pathway) | proliferation↑ migration↑ invasion↑ EMT↑ | tumor growth↑ | [20] |
Uterine corpus endometrial cancer | UCEC (RL-95-2, Ishikawa, HEC-1B, KLE, and HHUA) | 12 Mice (8-week-old, female) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/ HMGA1 | proliferation↑ migration↑ invasion↑ apoptosis↓ | tumor growth↑ | [21] |
Gastric cancer | GC (MKN28, BGC-823, SGC-7901, AGS, and HGC-27); Normal (GES-1) | 12 Nude mice (6-week-old, male) | Upregulation | qRT-PCR; two-tailed Student’s t-test and ANOVA | LINC00665/(Wnt/β-catenin signaling pathway) | proliferation↑ migration↑ invasion↑ apoptosis↓ | tumor growth↑ | [22] |
GC (AGS, SGC-7901, HGC27, MGC-803, MKN-45, and BGC-823); Normal (GES-1) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-149-3p/RNF2 | proliferation↑ migration↑ invasion↑ | - | [23] | |
GC (AGS, MKN45, HGC27, MKN28, and SGC7901); Normal (GES) | BALB/c nude mice (6-week-old) | Upregulation | TCGA RNA-seq and qRT-PCR; Unpaired Student’s t-test and ANOVA | LINC00665/ TGF-β/Smad-2, α-SMA | EMT↑ migration↑ invasion↑ cell cycle↑ apoptosis↓ | tumor growth↑ | [24] | |
GC (SGC-7901, AGS, and HST2); Normal (GES) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-379-5p/GRP78 | proliferation↑ apoptosis↓ | - | [25] | |
Hepatocellular carcinoma | HCC (Huh-7 and HepG2) | - | Upregulation | TCGA RNA-seq; Student’s t-test, ANOVA, Dunnett’s multiple comparisons test, Wilcoxon tests, and nonparametric Mann–Whitney U-test | NF-κB/ LINC00665/ PKR/NF-κB loop | proliferation↑ | tumor growth↑ | [26] |
- | - | Upregulation | TCGA RNA-seq, GEO RNA-seq and qRT-PCR; Independent sample t-tests | - | - | - | [3] | |
HCC (Huh-7, HepG2, HCCLM6, MHCC-97H, and Hep3B); Normal (HL-7702) | 24 BALB/c nude mice (4–6-week-old, female) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-186-5p/MAP4K3 | proliferation↑ apoptosis↓ autophagy↓ | tumor growth↑ | [27] | |
Colorectal cancer | CRC (DLD-1, SW480, KM12, SW116, and SW620); Normal (NCM460) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-9-5p/ATF1 | proliferation↑ migration↑ invasion↑ apoptosis↓ | - | [28] |
CRC (SW620, LOVO, HCT-116, and SW480); Normal (NCM460) | Nude mice (Female) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-214-3p, U2AF2/ CTNNB1/(Wnt/β-catenin signaling pathway) | proliferation↑ migration↑ invasion↑ apoptosis↓ | tumor growth↑ | [29] | |
CRC (DLD1, RKO, HCT116, LOVO, SW480, and NCM460) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-126-5p/PAK2, FZD3 | proliferation↑ invasion↑ apoptosis↓ | - | [30] | |
Cholangiocarcinoma | CCA (SNU-1196, SNU-1079, SNU-308, SNU-245, SNU-478, and SNU-869) | 18 Nude mice | Upregulation | qRT-PCR and lncRNA microarray analysis; two-tailed Student’s t-test and ANOVA | LINC00665/miR-424-5p/BCL9L/(Wnt/β-catenin signaling pathway) | proliferation↑ drug resistance↑ EMT↑ stemness↑ apoptosis↓ | Drug resistance↑ | [8] |
Non-small cell lung cancer | NSCLC (A549, H520, H1299, SPC-A1, and SK-MES-1) | 24 BALB/c nude mice | Upregulation | qRT-PCR and lncRNA microarray analysis; two-tailed Student’s t-test and ANOVA | LINC00665/miR-138-5p/E2F3 | proliferation↑ invasion↑ | tumor growth↑ | [31] |
LUAD (PC9) | 24 Athymic BALB/c nude mice (5-week-old, male) | Upregulation | qRT-PCR; Student’s t-test | LINC00665/ EGFR/(PI3K/AKT signaling pathway) | proliferation↑ drug resistance↑ migration↑ cell cycle↑ apoptosis↓ | tumor growth↑ Drug resistance↑ | [6] | |
NSCLC (PC9, SPC-A1, H1975, H1299, and A549); Normal (16HBE) | 24 BALB/c nude mice (4–5-week-old, male) | Upregulation | qRT-PCR; Student’s t-test, Wilcoxon test, and Chi-square test | LINC00665/ EZH2/ CDKN1C | proliferation↑ migration↑ cell cycle↑ drug resistance↑ apoptosis↓ | tumor growth↑ Drug resistance↑ | [7] | |
Lung adenocarcinoma | NSCLC (A549, H1299, 16HBE, and D551) | 30 BALB/c athymic nude mice (4-week-old, female) | Upregulation | qRT-PCR; Student’s t-test, multiple Student’s t-test, and nonparametric Mann–Whitney U-test | LINC00665/ YB-1/ANGPT4, ANGPTL3, VEGFA | proliferation↑ angiogenesis↑ | angiogenesis↑ | [32] |
NSCLC (A549, H1299, H1650, H520, SPC-A1, and SK-MES-1); Normal (16HBE) | 20 BALB/c athymic nude mice (4-week-old, female) | Upregulation | qRT-PCR; Student’s t-test and nonparametric Mann–Whitney U-test | SP1/ LINC00665/miR-98-5p/AKR1B10/(ERK signaling pathway) | proliferation↑ migration↑ invasion↑ EMT↑ | tumor growth↑ | [1] | |
LUAD (SK-LU-1 and Calu-3) | 15 BALB/c nude mice (6–8-week-old, male) | Upregulation | qRT-PCR and GEPIA; two-tailed Student’s t-test, ANOVA and Tukey’s tests | LINC00665/miR-181c-5p/ZIC2 | proliferation↑ invasion↑ | tumor growth↑ | [33] | |
LUAD (HBE, A549, H1299, H1975, PC9, and SPC-A1) | 10 BALB/c nude mice (male) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-195-5p/MYCBP | proliferation↑ invasion↑ cell cycle↑ apoptosis↓ | tumor growth↑ metastasis↑ | [34] | |
- | - | Upregulation | GEO RNA-seq | LINC00665/miR-let-7b/CCNA2 | - | - | [35] | |
Glioma | Glioma (U251 and U87); Normal (NHA) | BALB/c athymic nude mice(4-week-old) | Downregulation | qRT-PCR; Student’s t-test and ANOVA | TAF15/ LINC00665/ MTF1, YY2/ GTSE1 | proliferation↓ migration↓ invasion↓ apoptosis↑ | tumor growth↓ | [43] |
Glioma (U87 MG, LN229, A172, U373, and U251); Normal (NHA) | 6 Specific pathogen-free mice (4-week-old) | Upregulation | TCGA RNA-seq and qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-34a-5p/AGTR1 | proliferation↑ migration↑ invasion↑ | tumor growth↑ | [36] | |
Thymic epithelial tumors | - | - | Upregulation | TCGA RNA-seq | LINC00665/miR-140/MYO10 & LINC00665/miR-3199/WASF3 | - | - | [37] |
Osteosarcoma | Osteosarcoma (143B, U2OS, MG-63, and Saos-2); Normal (hFOB1.19) | - | Upregulation | qRT-PCR; Student’s t-test, ANOVA, and Dunnett’s test | LINC00665/miR-3619 | proliferation↑ migration↑ invasion↑ | - | [38] |
Osteosarcoma (MG-63, U2OS, 143B, and Saos-2); Normal (hFOB) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-708-5p, miR-142-5p/RAP1B | proliferation↑ migration↑ invasion↑ | - | [2] | |
Acute myelocytic leukemia | MM (MM.1S, U266, RPMI-8226, KM3, and H929); Normal (nPCs) | - | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-214-3p/PSMD10, ASF1B | proliferation↑ apoptosis↓ | - | [39] |
Melanoma | Melanoma (A375, M21, A2058, and A-875) | BALB/c nude mice (6-week-old, male) | Upregulation | qRT-PCR; Student’s t-test and ANOVA | LINC00665/miR-224-5p/VMA21 | proliferation↑ migration↑ | - | [40] |
Acute myelocytic leukemia | AML (KG1, U937, NB4, and HL60); Normal (HS-5) | - | Upregulation | qRT-PCR and GEPIA; Student’s t-test, ANOVA, and Dunnett’s test | LINC00665/miR-4458-5p/DOCK1/Rac1 | proliferation↑ migration↑ adhesion↑ apoptosis↓ | - | [41] |
T cell acute lymphoblastic leukemia | T-ALL (MOLT-4 and CCRF-CEM); Normal (PBMC) | - | Upregulation | qRT-PCR and GEPIA; Student’s t-test, ANOVA, and Bonferroni post hoc test | LINC00665/miR-101 | viability↑ migration↑ adhesion↑ | - | [42] |
System | Tumor Type | Sample Size | Expression | Prognostic/Diagnostic Value | Ref. |
---|---|---|---|---|---|
Reproductive system | Breast cancer | 60 patients | Upregulation | Positively associated with lymph node metastasis and TNM stage; prognostic factor of OS (p = 0.0209) and DFS (p = 0.0492) | [11] |
106 patients | Upregulation | Positively associated with tumor size, lymph node metastasis and TNM stage | [12] | ||
102 patients | Upregulation | Positively associated with lymph node metastasis; AUC = 0.785 | [9] | ||
36 patients | Upregulation | Positively associated with lymph node metastasis and TNM stage; prognostic factor of OS (p = 0.016) | [13] | ||
Triple negative breast cancer | 217 patients | Downregulation | Prognostic factor of OS (MST: 29 versus 43 months, p = 0.02, HR = 2.64) | [5] | |
Prostate cancer | 50 patients | Upregulation | Positively associated with lymph node metastasis and TNM stage; prognostic factor of OS (p < 0.05) | [15] | |
- | Upregulation | Prognostic factor of OS (p = 0.022) | [16] | ||
Ovarian cancer | 56 patients | Upregulation | Positively associated with tumor size, lymph node metastasis and FIGO stage; prognostic factor of OS (p = 0.0037, HR = 1.37) | [17] | |
- | Upregulation | Prognostic factor of OS (p = 5.006 × 10−3) | [18] | ||
- | Upregulation | Prognostic factor of OS (p = 0.00051, HR = 1.43) | [44] | ||
High-grade serous ovarian cancer | - | Upregulation | Negatively associated with the infiltration level of macrophages and dendritic cells | [19] | |
Digestive system | Gastric cancer | 49 patients | Upregulation | Positively associated with poor differentiation and TNM stage | [23] |
116 patients | Upregulation | Positively associated with tumor depth, lymph node metastasis and TNM stage; prognostic factor of OS (p < 0.05, HR = 2.703); AUC = 0.828 | [24] | ||
Hepatocellular carcinoma | 122 patients | Upregulation | Positively associated with lymph node metastasis and TNM stage; prognostic factor of OS (p < 0.05) | [26] | |
39 patients | Upregulation | Positively associated with poor differentiation, TNM stage and vascular invasion; prognostic factor of OS (MST: 46 versus 70 months, p = 0.027, HR = 1.477); AUC = 0.614, sensitivity = 0.55, specificity = 0.53 | [3] | ||
76 patients | Upregulation | Positively associated with tumor size and poor differentiation; prognostic factor of OS (p < 0.05) | [27] | ||
Colorectal cancer | 46 patients | Upregulation | Positively associated with lymph node metastasis and poor differentiation | [28] | |
Cholangiocarcinoma | 100 patients | Upregulation | Positively associated with lymph node metastasis and TNM stage; prognostic factor of OS (p = 0.0375, HR = 1.835) and RFS (p < 0.001, HR = 2.554) | [8] | |
Respiratory system | Non-small cell lung cancer | 60 patients | Upregulation | Positively associated with tumor size, lymph node metastasis and TNM stage; prognostic factor of OS (p = 0.005) and PFS (p = 0.002) | [7] |
Lung adenocarcinoma | 60 patients | Upregulation | Positively associated with tumor size, lymph node metastasis and TNM stage | [32] | |
80 patients | Upregulation | Positively associated with tumor size, lymph node metastasis and TNM stage; prognostic factor of OS (p = 0.0115) and RFS (p < 0.001) | [1] | ||
84 patients | Upregulation | Prognostic factor of OS (p = 0.035, HR = 1.44) | [33] | ||
- | Upregulation | Prognostic factor of OS (p < 0.05) | [35] | ||
Nervous system | Glioma | - | Downregulation | Negatively associated with pathological grade | [43] |
48 patients | Upregulation | Prognostic factor of OS (p = 0.0241) | [36] | ||
Endocrine system | Thymic epithelial tumors | - | Upregulation | Prognostic factor of OS (p = 0.047) | [37] |
Endocrine system | Osteosarcoma | 33 patients | Upregulation | Prognostic factor of OS (p < 0.05) | [38] |
42 patients | Upregulation | Prognostic factor of OS (p = 0.011) | [2] |
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Zhong, C.; Xie, Z.; Shen, J.; Jia, Y.; Duan, S. LINC00665: An Emerging Biomarker for Cancer Diagnostics and Therapeutics. Cells 2022, 11, 1540. https://doi.org/10.3390/cells11091540
Zhong C, Xie Z, Shen J, Jia Y, Duan S. LINC00665: An Emerging Biomarker for Cancer Diagnostics and Therapeutics. Cells. 2022; 11(9):1540. https://doi.org/10.3390/cells11091540
Chicago/Turabian StyleZhong, Chenming, Zijun Xie, Jinze Shen, Yunhua Jia, and Shiwei Duan. 2022. "LINC00665: An Emerging Biomarker for Cancer Diagnostics and Therapeutics" Cells 11, no. 9: 1540. https://doi.org/10.3390/cells11091540
APA StyleZhong, C., Xie, Z., Shen, J., Jia, Y., & Duan, S. (2022). LINC00665: An Emerging Biomarker for Cancer Diagnostics and Therapeutics. Cells, 11(9), 1540. https://doi.org/10.3390/cells11091540