Histone Acetylation Changes in Plant Response to Drought Stress
Abstract
:1. Drought Response Physiology and Strategies
2. Molecular Response to Drought: The ABA Drought Response Pathways
3. Regulation of Histone Acetylation in Drought Response
4. HATs and HDACs in Plants
5. Histone Acetylation Level in Drought Responses
5.1. HATs
5.2. HDACs
6. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Conflicts of Interest
References
- Barber, V.A.; Juday, G.P.; Finney, B.P. Reduced growth of Alaskan white spruce in the twentieth century from temperature-induced drought stress. Nat. Cell Biol. 2000, 405, 668–673. [Google Scholar] [CrossRef] [PubMed]
- Choat, B.; Jansen, S.; Brodribb, T.J.; Cochard, H.; Delzon, S.; Bhaskar, R.; Bucci, S.J.; Feild, T.S.; Gleason, S.M.; Hacke, U.G.; et al. Global convergence in the vulnerability of forests to drought. Nature 2012, 491, 752–755. [Google Scholar] [CrossRef] [Green Version]
- Gupta, A.; Rico-Medina, A.; Caño-Delgado, A.I. The physiology of plant responses to drought. Science 2020, 368, 266–269. [Google Scholar] [CrossRef]
- Fang, Y.; Xiong, L. General mechanisms of drought response and their application in drought resistance improvement in plants. Cell. Mol. Life Sci. 2015, 72, 673–689. [Google Scholar] [CrossRef]
- Tardieu, F.; Simonneau, T.; Muller, B. The Physiological Basis of Drought Tolerance in Crop Plants: A Scenario-Dependent Probabilistic Approach. Annu. Rev. Plant Biol. 2018, 69, 733–759. [Google Scholar] [CrossRef] [Green Version]
- Rellán-Álvarez, R.; Lobet, G.; Dinneny, J.R. Environmental Control of Root System Biology. Annu. Rev. Plant Biol. 2016, 67, 619–642. [Google Scholar] [CrossRef] [Green Version]
- Dinneny, J.R. Developmental Responses to Water and Salinity in Root Systems. Annu. Rev. Cell Dev. Biol. 2019, 35, 239–257. [Google Scholar] [CrossRef] [PubMed]
- Bailey-Serres, J.; Parker, J.E.; Ainsworth, E.A.; Oldroyd, G.E.D.; Schroeder, J.I. Genetic strategies for improving crop yields. Nature 2019, 575, 109–118. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Pierik, R.; Testerink, C. The Art of Being Flexible: How to Escape from Shade, Salt, and Drought. Plant Physiol. 2014, 166, 5–22. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Tyree, M.T.; Sperry, J.S. Vulnerability of xylem to cavitation and embolism. Annu. Rev. Plant Physiol. Plant 1989, 1, 19–36. [Google Scholar] [CrossRef]
- Tyree, M.T.; Kolb, K.J.; Rood, S.B.; Patiño, S. Vulnerability to drought-induced cavitation of riparian cottonwoods in Alberta: A possible factor in the decline of the ecosystem? Tree Physiol. 1994, 14, 455–466. [Google Scholar] [CrossRef]
- Rodriguez-Zaccaro, F.D.; Groover, A. Wood and water: How trees modify wood development to cope with drought. Plants People Planet 2019, 1, 346–355. [Google Scholar] [CrossRef]
- Li, S.; Lin, Y.-C.J.; Wang, P.; Zhang, B.; Li, M.; Chen, S.; Shi, R.; Tunlaya-Anukit, S.; Liu, X.; Wang, Z.; et al. The AREB1 Transcription Factor Influences Histone Acetylation to Regulate Drought Responses and Tolerance in Populus trichocarpa. Plant Cell 2019, 31, 663–686. [Google Scholar] [CrossRef] [Green Version]
- Fujita, Y.; Fujita, M.; Shinozaki, K.; Yamaguchi-Shinozaki, K. ABA-mediated transcriptional regulation in response to osmotic stress in plants. J. Plant Res. 2011, 124, 509–525. [Google Scholar] [CrossRef]
- Yoshida, T.; Mogami, J.; Yamaguchi-Shinozaki, K. ABA-dependent and ABA-independent signaling in response to osmotic stress in plants. Curr. Opin. Plant Biol. 2014, 21, 133–139. [Google Scholar] [CrossRef]
- Singh, D.; Laxmi, A. Transcriptional regulation of drought response: A tortuous network of transcriptional factors. Front. Plant Sci. 2015, 6, 895. [Google Scholar] [CrossRef] [Green Version]
- Sah, S.K.; Reddy, K.R.; Li, J. Abscisic Acid and Abiotic Stress Tolerance in Crop Plants. Front. Plant Sci. 2016, 7, 571. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Kuromori, T.; Seo, M.; Shinozaki, K. ABA Transport and Plant Water Stress Responses. Trends Plant Sci. 2018, 23, 513–522. [Google Scholar] [CrossRef]
- Kim, J.-M.; To, T.K.; Matsui, A.; Tanoi, K.; Kobayashi, N.I.; Matsuda, F.; Habu, Y.; Ogawa, D.; Sakamoto, T.; Matsunaga, S.; et al. Acetate-mediated novel survival strategy against drought in plants. Nat. Plants 2017, 3, 17097. [Google Scholar] [CrossRef] [PubMed]
- Sakuma, Y.; Maruyama, K.; Qin, F.; Osakabe, Y.; Shinozaki, K.; Yamaguchi-Shinozaki, K. Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression. Proc. Natl. Acad. Sci. USA 2006, 103, 18822–18827. [Google Scholar] [CrossRef] [Green Version]
- Sakuma, Y.; Maruyama, K.; Osakabe, Y.; Qin, F.; Seki, M.; Shinozaki, K.; Yamaguchi-Shinozaki, K. Functional Analysis of an Arabidopsis Transcription Factor, DREB2A, Involved in Drought-Responsive Gene Expression. Plant Cell 2006, 18, 1292–1309. [Google Scholar] [CrossRef] [Green Version]
- Tran, L.-S.; Nakashima, K.; Sakuma, Y.; Simpson, S.D.; Fujita, Y.; Maruyama, K.; Fujita, M.; Seki, M.; Shinozaki, K.; Yamaguchi-Shinozaki, K. Isolation and Functional Analysis of Arabidopsis Stress-Inducible NAC Transcription Factors That Bind to a Drought-Responsive cis-Element in the early responsive to dehydration stress 1 Promoter. Plant Cell 2004, 16, 2481–2498. [Google Scholar] [CrossRef] [Green Version]
- Fujita, Y.; Fujita, M.; Satoh, R.; Maruyama, K.; Parvez, M.M.; Seki, M.; Hiratsu, K.; Ohme-Takagi, M.; Shinozaki, K.; Yamaguchi-Shinozaki, K. AREB1 Is a Transcription Activator of Novel ABRE-Dependent ABA Signaling That Enhances Drought Stress Tolerance in Arabidopsis. Plant Cell 2005, 17, 3470–3488. [Google Scholar] [CrossRef] [Green Version]
- Nakashima, K.; Yamaguchi-Shinozaki, K.; Shinozaki, K. The transcriptional regulatory network in the drought response and its crosstalk in abiotic stress responses including drought, cold, and heat. Front. Plant Sci. 2014, 5, 170. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Ueda, M.; Seki, M. Histone Modifications Form Epigenetic Regulatory Networks to Regulate Abiotic Stress Response. Plant Physiol. 2020, 182, 15–26. [Google Scholar] [CrossRef] [Green Version]
- Chang, Y.; Zhu, C.; Jiang, J.; Zhang, H.; Zhu, J.; Duan, C. Epigenetic regulation in plant abiotic stress responses. J. Integr. Plant Biol. 2020, 62, 563–580. [Google Scholar] [CrossRef]
- Kumar, A.S.S. Epigenetic Regulation of Abiotic Stress Tolerance in Plants. Adv. Plants Agric. Res. 2016, 5, 1–6. [Google Scholar] [CrossRef]
- Hewezi, T. Editorial: Epigenetic regulation of plant development and stress responses. Plant Cell Rep. 2017, 37, 1–2. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Duarte-Aké, F.; Us-Camas, R.; Cancino-García, V.J.; De-La-Peña, C. Epigenetic changes and photosynthetic plasticity in response to environment. Environ. Exp. Bot. 2018, 159, 108–120. [Google Scholar] [CrossRef]
- Song, L.; Huang, S.-S.C.; Wise, A.; Castanon, R.; Nery, J.R.; Chen, H.; Watanabe, M.; Thomas, J.; Bar-Joseph, Z.; Ecker, J.R. A transcription factor hierarchy defines an environmental stress response network. Science 2016, 354, aag1550. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Kouzarides, T. Chromatin Modifications and Their Function. Cell 2007, 128, 693–705. [Google Scholar] [CrossRef] [Green Version]
- Roy, D.; Paul, A.; Roy, A.; Ghosh, R.; Ganguly, P.; Chaudhuri, S. Differential Acetylation of Histone H3 at the Regulatory Region of OsDREB1b Promoter Facilitates Chromatin Remodelling and Transcription Activation during Cold Stress. PLoS ONE 2014, 9, e100343. [Google Scholar] [CrossRef] [Green Version]
- Kumar, V.; Thakur, J.K.; Prasad, M. Histone acetylation dynamics regulating plant development and stress responses. Cell. Mol. Life Sci. 2021, 78, 4467–4486. [Google Scholar] [CrossRef]
- Bendandi, A.; Patelli, A.S.; Diaspro, A.; Rocchia, W. The role of histone tails in nucleosome stability: An electrostatic perspective. Comput. Struct. Biotechnol. J. 2020, 18, 2799–2809. [Google Scholar] [CrossRef] [PubMed]
- Garske, A.L.; Oliver, S.S.; Wagner, E.K.; Musselman, C.; LeRoy, G.; Garcia, B.A.; Kutateladze, T.; Denu, J.M. Combinatorial profiling of chromatin binding modules reveals multisite discrimination. Nat. Chem. Biol. 2010, 6, 283–290. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Lusser, A.; Kölle, D.; Loidl, P. Histone acetylation: Lessons from the plant kingdom. Trends Plant Sci. 2001, 6, 59–65. [Google Scholar] [CrossRef]
- Jiang, J.; Ding, A.B.; Liu, F.; Zhong, X. Linking signaling pathways to histone acetylation dynamics in plants. J. Exp. Bot. 2020, 71, 5179–5190. [Google Scholar] [CrossRef] [PubMed]
- Hu, Y.; Lu, Y.; Zhao, Y.; Zhou, D.-X. Histone Acetylation Dynamics Integrates Metabolic Activity to Regulate Plant Response to Stress. Front. Plant Sci. 2019, 10, 1236. [Google Scholar] [CrossRef] [PubMed]
- Boycheva, I.; Vassileva, V.; Iantcheva, A. Histone Acetyltransferases in Plant Development and Plasticity. Curr. Genom. 2014, 15, 28–37. [Google Scholar] [CrossRef] [Green Version]
- Chen, X.; Ding, A.B.; Zhong, X. Functions and mechanisms of plant histone deacetylases. Sci. China Life Sci. 2019, 63, 206–216. [Google Scholar] [CrossRef] [Green Version]
- Luo, C.; Lam, E. Quantitatively profiling genome-wide patterns of histone modifications in Arabidopsis thaliana using ChIP-seq. Methods Mol. Biol. 2014, 1112, 177–193. [Google Scholar]
- Liu, Y.; Liu, K.; Yin, L.; Yu, Y.; Qi, J.; Shen, W.-H.; Zhu, J.; Zhang, Y.; Dong, A. H3K4me2 functions as a repressive epigenetic mark in plants. Epigenet. Chromatin 2019, 12, 1–14. [Google Scholar] [CrossRef] [PubMed]
- Hu, Y.; Zhang, L.; He, S.; Huang, M.; Tan, J.; Zhao, L.; Yan, S.; Li, H.; Zhou, K.; Liang, Y.; et al. Cold stress selectively unsilences tandem repeats in heterochromatin associated with accumulation of H3K9ac. Plant Cell Environ. 2012, 35, 2130–2142. [Google Scholar] [CrossRef]
- Brownell, J.E.; Zhou, J.; Ranalli, T.; Kobayashi, R.; Edmondson, D.G.; Roth, S.Y.; Allis, C.D. Tetrahymena histone acetyltransferase A: A homolog to yeast Gcn5p linking histone acetylation to gene activation. Cell 1996, 84, 843–851. [Google Scholar] [CrossRef] [Green Version]
- Luo, M.; Cheng, K.; Xu, Y.; Yang, S.; Wu, K. Plant Responses to Abiotic Stress Regulated by Histone Deacetylases. Front. Plant Sci. 2017, 8, 2147. [Google Scholar] [CrossRef] [Green Version]
- Pandey, R.; MuÈller, A.; Napoli, C.A.; Selinger, D.A.; Pikaard, C.S.; Richards, E.J.; Bender, J.; Mount, D.W.; Jorgensen, R.A. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res. 2002, 30, 5036–5055. [Google Scholar] [CrossRef] [Green Version]
- Tan, S.; Gao, L.; Li, T.; Chen, L. Phylogenetic and expression analysis of histone acetyltransferases in Brachypodium distachyon. Genom. 2019, 111, 1966–1976. [Google Scholar] [CrossRef]
- Eom, S.H.; Hyun, T.K. Histone Acetyltransferases (HATs) in Chinese Cabbage: Insights from Histone H3 Acetylation and Expression Profiling of HATs in Response to Abiotic Stresses. J. Am. Soc. Hortic. Sci. 2018, 143, 296–303. [Google Scholar] [CrossRef] [Green Version]
- Eom, S.; Hyun, T. Comprehensive Analysis of the Histone Deacetylase Gene Family in Chinese Cabbage (Brassica rapa): From Evolution and Expression Pattern to Functional Analysis of BraHDA3. Agriculture 2021, 11, 244. [Google Scholar] [CrossRef]
- Imran, M.; Shafiq, S.; Farooq, M.A.; Naeem, M.K.; Widemann, E.; Bakhsh, A.; Jensen, K.B.; Wang, R.R.-C. Comparative Genome-wide Analysis and Expression Profiling of Histone Acetyltransferase (HAT) Gene Family in Response to Hormonal Applications, Metal and Abiotic Stresses in Cotton. Int. J. Mol. Sci. 2019, 20, 5311. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Kumar, V.; Singh, B.; Singh, S.K.; Rai, K.M.; Singh, S.P.; Sable, A.; Pant, P.; Saxena, G.; Sawant, S.V. Role of Gh HDA 5 in H3K9 deacetylation and fiber initiation in Gossypium hirsutum. Plant J. 2018, 95, 1069–1083. [Google Scholar] [CrossRef] [Green Version]
- Zhang, M.; Da Silva, J.A.T.; Yu, Z.; Wang, H.; Si, C.; Zhao, C.; He, C.; Duan, J. Identification of histone deacetylase genes in Dendrobium officinale and their expression profiles under phytohormone and abiotic stress treatments. PeerJ 2020, 8, e10482. [Google Scholar] [CrossRef] [PubMed]
- Aquea, F.; Timmermann, T.; Arce-Johnson, P. Analysis of histone acetyltransferase and deacetylase families of Vitis vinifera. Plant Physiol. Biochem. 2010, 48, 194–199. [Google Scholar] [CrossRef] [PubMed]
- Peng, M.; Ying, P.; Liu, X.; Li, C.; Xia, R.; Li, J.; Zhao, M. Genome-Wide Identification of Histone Modifiers and Their Expression Patterns during Fruit Abscission in Litchi. Front. Plant Sci. 2017, 8, 639. [Google Scholar] [CrossRef] [PubMed]
- Zhang, K.; Yu, L.; Pang, X.; Cao, H.; Si, H.; Zang, J.; Xing, J.; Dong, J. In silico analysis of maize HDACs with an emphasis on their response to biotic and abiotic stresses. PeerJ 2020, 8, e8539. [Google Scholar] [CrossRef] [Green Version]
- Chu, J.; Chen, Z. Molecular identification of histone acetyltransferases and deacetylases in lower plant Marchantia polymorpha. Plant Physiol. Biochem. 2018, 132, 612–622. [Google Scholar] [CrossRef] [PubMed]
- Liu, X.; Luo, M.; Zhang, W.; Zhao, J.; Zhang, J.; Wu, K.; Tian, L.; Duan, J. Histone acetyltransferases in rice (Oryza sativa L.): Phylogenetic analysis, subcellular localization and expression. BMC Plant Biol. 2012, 12, 145. [Google Scholar] [CrossRef] [Green Version]
- Fu, W.; Wu, K.; Duan, J. Sequence and expression analysis of histone deacetylases in rice. Biochem. Biophys. Res. Commun. 2007, 356, 843–850. [Google Scholar] [CrossRef]
- Hou, J.; Ren, R.; Xiao, H.; Chen, Z.; Yu, J.; Zhang, H.; Shi, Q.; Hou, H.; He, S.; Li, L. Characteristic and evolution of HAT and HDAC genes in Gramineae genomes and their expression analysis under diverse stress in Oryza sativa. Planta 2021, 253, 1–22. [Google Scholar] [CrossRef]
- Yang, C.; Shen, W.; Chen, H.; Chu, L.; Xu, Y.; Zhou, X.; Liu, C.; Chen, C.; Zeng, J.; Liu, J.; et al. Characterization and subcellular localization of histone deacetylases and their roles in response to abiotic stresses in soybean. BMC Plant Biol. 2018, 18, 1–13. [Google Scholar] [CrossRef]
- Xu, J.; Xu, H.; Liu, Y.; Wang, X.; Xu, Q.; Deng, X. Genome-wide identification of sweet orange (Citrus sinensis) histone modification gene families and their expression analysis during the fruit development and fruit-blue mold infection process. Front. Plant Sci. 2015, 6, 607. [Google Scholar] [CrossRef] [Green Version]
- Yuan, L.; Dai, H.; Zheng, S.; Huang, R.; Tong, H. Genome-wide identification of the HDAC family proteins and functional characterization of CsHD2C, a HD2-type histone deacetylase gene in tea plant (Camellia sinensis L. O. Kuntze). Plant Physiol. Biochem. 2020, 155, 898–913. [Google Scholar] [CrossRef]
- Cigliano, R.A.; Sanseverino, W.; Cremona, G.; Ercolano, M.R.; Conicella, C.; Consiglio, F.M. Genome-wide analysis of histone modifiers in tomato: Gaining an insight into their developmental roles. BMC Genom. 2013, 14, 57. [Google Scholar] [CrossRef] [Green Version]
- Li, H.; Liu, H.; Pei, X.; Chen, H.; Li, X.; Wang, J.; Wang, C. Comparative Genome-Wide Analysis and Expression Profiling of Histone Acetyltransferases and Histone Deacetylases Involved in the Response to Drought in Wheat. J. Plant Growth Regul. 2021, 1–14. [Google Scholar] [CrossRef]
- Gao, S.; Li, L.; Han, X.; Liu, T.; Jin, P.; Cai, L.; Xu, M.; Zhang, T.; Zhang, F.; Chen, J.; et al. Genome-wide identification of the histone acetyltransferase gene family in Triticum aestivum. BMC Genom. 2021, 22, 1–17. [Google Scholar] [CrossRef]
- Jin, P.; Gao, S.; He, L.; Xu, M.; Zhang, T.; Zhang, F.; Jiang, Y.; Liu, T.; Yang, J.; Yang, J.; et al. Genome-Wide Identification and Expression Analysis of the Histone Deacetylase Gene Family in Wheat (Triticum aestivum L.). Plants 2020, 10, 19. [Google Scholar] [CrossRef]
- Kim, J.-M.; To, T.K.; Ishida, J.; Morosawa, T.; Kawashima, M.; Matsui, A.; Toyoda, T.; Kimura, H.; Shinozaki, K.; Seki, M. Alterations of Lysine Modifications on the Histone H3 N-Tail under Drought Stress Conditions in Arabidopsis thaliana. Plant Cell Physiol. 2008, 49, 1580–1588. [Google Scholar] [CrossRef] [Green Version]
- Kim, J.-M.; To, T.K.; Ishida, J.; Matsui, A.; Kimura, H.; Seki, M. Transition of Chromatin Status during the Process of Recovery from Drought Stress in Arabidopsis thaliana. Plant Cell Physiol. 2012, 53, 847–856. [Google Scholar] [CrossRef] [PubMed]
- Charron, J.-B.F.; He, H.; Elling, A.A.; Deng, X.W. Dynamic Landscapes of Four Histone Modifications during Deetiolation in Arabidopsis. Plant Cell 2010, 21, 3732–3748. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Zhou, J.; Wang, X.; He, K.; Charron, J.-B.F.; Elling, A.A.; Deng, X.W. Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression. Plant Mol. Biol. 2010, 72, 585–595. [Google Scholar] [CrossRef] [PubMed]
- Shahbazian, M.D.; Grunstein, M. Functions of Site-Specific Histone Acetylation and Deacetylation. Annu. Rev. Biochem. 2007, 76, 75–100. [Google Scholar] [CrossRef]
- Zentner, G.; Henikoff, S. Regulation of nucleosome dynamics by histone modifications. Nat. Struct. Mol. Biol. 2013, 20, 259–266. [Google Scholar] [CrossRef]
- Gan, L.; Wei, Z.; Yang, Z.; Li, F.; Wang, Z. Updated Mechanisms of GCN5—The Monkey King of the Plant Kingdom in Plant Development and Resistance to Abiotic Stresses. Cells 2021, 10, 979. [Google Scholar] [CrossRef]
- Wei, F.; Tang, D.; Li, Z.; Kashif, M.H.; Khan, A.; Lu, H.; Jia, R.; Chen, P. Molecular cloning and subcellular localization of six HDACs and their roles in response to salt and drought stress in kenaf (Hibiscus cannabinus L.). Biol. Res. 2019, 52, 1–11. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Yu, X.; Gao, Q.; Chen, G.; Guo, J.-E.; Guo, X.; Tang, B.; Hu, Z. SlHDA5, a Tomato Histone Deacetylase Gene, Is Involved in Responding to Salt, Drought, and ABA. Plant Mol. Biol. Rep. 2017, 36, 36–44. [Google Scholar] [CrossRef]
- Ueda, M.; Matsui, A.; Nakamura, T.; Abe, T.; Sunaoshi, Y.; Shimada, H.; Seki, M. Versatility of HDA19-deficiency in increasing the tolerance of Arabidopsis to different environmental stresses. Plant Signal. Behav. 2018, 13, 1–4. [Google Scholar] [CrossRef] [PubMed]
- Han, Z.; Yu, H.; Zhao, Z.; Hunter, D.; Luo, X.; Duan, J.; Tian, L. AtHD2D Gene Plays a Role in Plant Growth, Development, and Response to Abiotic Stresses in Arabidopsis thaliana. Front. Plant Sci. 2016, 7, 310. [Google Scholar] [CrossRef] [Green Version]
- Ma, X.; Zhang, B.; Liu, C.; Tong, B.; Guan, T.; Xia, D. Expression of a populus histone deacetylase gene 84KHDA903 in tobacco enhances drought tolerance. Plant Sci. 2017, 265, 1–11. [Google Scholar] [CrossRef] [PubMed]
- Song, J.; Henry, H.A.; Tian, L. Brachypodium histone deacetylase BdHD1 positively regulates ABA and drought stress responses. Plant Sci. 2019, 283, 355–365. [Google Scholar] [CrossRef]
- Rasheed, S.; Bashir, K.; Kim, J.-M.; Ando, M.; Tanaka, M.; Seki, M. The modulation of acetic acid pathway genes in Arabidopsis improves survival under drought stress. Sci. Rep. 2018, 8, 7831. [Google Scholar] [CrossRef] [PubMed]
- Zheng, Y.; Ding, Y.; Sun, X.; Xie, S.; Wang, D.; Liu, X.; Su, L.; Wei, W.; Pan, L.; Zhou, D.-X. Histone deacetylase HDA9 negatively regulates salt and drought stress responsiveness in Arabidopsis. J. Exp. Bot. 2016, 67, 1703–1713. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Khan, I.U.; Ali, A.; Khan, H.A.; Baek, D.; Park, J.; Lim, C.J.; Zareen, S.; Jan, M.; Lee, S.Y.; Pardo, J.M.; et al. PWR/HDA9/ABI4 Complex Epigenetically Regulates ABA Dependent Drought Stress Tolerance in Arabidopsis. Front. Plant Sci. 2020, 11, 623. [Google Scholar] [CrossRef] [PubMed]
- Baek, D.; Shin, G.; Kim, M.C.; Shen, M.; Lee, S.Y.; Yun, D.-J. Histone Deacetylase HDA9 With ABI4 Contributes to Abscisic Acid Homeostasis in Drought Stress Response. Front. Plant Sci. 2020, 11, 143. [Google Scholar] [CrossRef] [PubMed]
- Gil Lee, H.; Seo, P.J. MYB96 recruits the HDA15 protein to suppress negative regulators of ABA signaling in Arabidopsis. Nat. Commun. 2019, 10, 1–14. [Google Scholar] [CrossRef] [Green Version]
- Seo, P.J.; Xiang, F.; Qiao, M.; Park, J.-Y.; Na Lee, Y.; Kim, S.-G.; Lee, Y.-H.; Park, W.J.; Park, C.-M. The MYB96 Transcription Factor Mediates Abscisic Acid Signaling during Drought Stress Response in Arabidopsis. Plant Physiol. 2009, 151, 275–289. [Google Scholar] [CrossRef] [Green Version]
- Seo, P.J.; Park, C. MYB96-mediated abscisic acid signals induce pathogen resistance response by promoting salicylic acid biosynthesis in Arabidopsis. New Phytol. 2010, 186, 471–483. [Google Scholar] [CrossRef]
- Seo, P.J.; Lee, S.B.; Suh, M.C.; Park, M.-J.; Go, Y.S.; Park, C.-M. The MYB96 Transcription Factor Regulates Cuticular Wax Biosynthesis under Drought Conditions in Arabidopsis. Plant Cell 2011, 23, 1138–1152. [Google Scholar] [CrossRef] [PubMed] [Green Version]
Plant | HATs | HDACs | ||
---|---|---|---|---|
Number | Reference | Number | Reference | |
Arabidopsis thaliana | 12 | [46] | 18 | [46] |
Brachypodium distachyon | 8 | [47] | - | - |
Chinese Cabbage (Brassica rapa) | 15 | [48] | 20 | [49] |
Cotton (Gossypium raimondi and Gossypium arboretum) | 9 | [50] | - | - |
Cotton (Gossypium hirsutum) | 18 | [50] | 30 | [51] |
Dendrobium officinale | - | - | 14 | [52] |
Grape (Vitis vinifera) | 7 | [53] | 13 | [53] |
Litchi (Litchi chinensis Sonn. cv. Feizixiao) | 6 | [54] | 11 | [54] |
Maize (Zea mays) | - | - | 18 | [55] |
Marchantia polymorpha | 7 | [56] | 12 | [56] |
Rice (Oryza sativa) | 8 | [57] | 18 | [58] |
7 Gramineae genomes (Oryza sativa) | 37 | [59] | 110 | [59] |
Soybean (Glycine max) | - | - | 28 | [60] |
Sweet orange (Citrus sinensis) | 50 | [61] | 16 | [61] |
Tea (Camellia sinensis L. O. Kuntze) | - | - | 18 | [62] |
Tomato (Solanum lycopersicum) | 32 | [63] | 15 | [63] |
Wheat (Triticum aestivum) | 30 | [64] | 53 | [64] |
Wheat (Triticum aestivum) | 31 | [65] | 49 | [66] |
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Li, S.; He, X.; Gao, Y.; Zhou, C.; Chiang, V.L.; Li, W. Histone Acetylation Changes in Plant Response to Drought Stress. Genes 2021, 12, 1409. https://doi.org/10.3390/genes12091409
Li S, He X, Gao Y, Zhou C, Chiang VL, Li W. Histone Acetylation Changes in Plant Response to Drought Stress. Genes. 2021; 12(9):1409. https://doi.org/10.3390/genes12091409
Chicago/Turabian StyleLi, Shuang, Xu He, Yuan Gao, Chenguang Zhou, Vincent L. Chiang, and Wei Li. 2021. "Histone Acetylation Changes in Plant Response to Drought Stress" Genes 12, no. 9: 1409. https://doi.org/10.3390/genes12091409
APA StyleLi, S., He, X., Gao, Y., Zhou, C., Chiang, V. L., & Li, W. (2021). Histone Acetylation Changes in Plant Response to Drought Stress. Genes, 12(9), 1409. https://doi.org/10.3390/genes12091409