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Article

Key Taxa of the Gut Microbiome Associated with the Relationship Between Environmental Sensitivity and Inflammation-Related Biomarkers

1
R&D Division, Meiji Co., Ltd., 1-29-1 Nanakuni, Hachioji 192-0919, Japan
2
Faculty of Education, Soka University; 1-236 Tangi-machi, Hachioji 192-8577, Japan
3
Wellness Science Labs, Meiji Holdings Co., Ltd., 1-29-1 Nanakuni, Hachioji 192-0919, Japan
*
Author to whom correspondence should be addressed.
Microorganisms 2025, 13(1), 185; https://doi.org/10.3390/microorganisms13010185
Submission received: 12 December 2024 / Revised: 10 January 2025 / Accepted: 15 January 2025 / Published: 16 January 2025

Abstract

:
Individual differences in environmental sensitivity are linked to stress-related psychiatric symptoms. In previous research, we found that high environmental sensitivity can be a risk factor for increased inflammation and gut permeability, particularly when gut microbiome diversity is low. However, the specific gut bacterial taxa involved in this interaction remain unclear. As a preliminary study, this research aimed to identify the key gut microbiome taxa associated with this relationship. Environmental sensitivity, gut microbiome composition, gut permeability (lipopolysaccharide-binding protein, LBP), and inflammation (C-reactive protein, CRP) biomarkers were evaluated in 88 participants. The interaction between environmental sensitivity and the relative abundance of the family Marinifilaceae (genus Butyricimonas) was a predictor of CRP levels. Similarly, the interaction between environmental sensitivity and relative abundance of the family Barnesiellaceae (genus Coprobacter), the family Akkermansiaceae (genus Akkermansia), the genus Family XIII AD3011 group, the genus GCA-900066225, or the genus Ruminiclostridium 1 predicted LBP levels. Individuals with high environmental sensitivity exhibited elevated CRP or LBP levels when the relative abundance of these taxa was low. Conversely, highly sensitive individuals had lower CRP or LBP levels when the relative abundance of these taxa was high. This study suggests that specific taxa serve as one of the protective factors against inflammation and gut permeability in individuals with high environmental sensitivity. Further in-depth studies are needed to confirm these associations and understand the underlying mechanisms.

1. Introduction

Environmental sensitivity, also known as sensory processing sensitivity (SPS), is a genetic, biological, and psychological trait that accounts for individual differences in how people perceive and process both negative and positive environments [1]. Some individuals are more sensitive to environmental influences due to their genetic or temperamental predispositions. As a result, they are more negatively affected by stressful environments and more positively impacted by supportive ones. This suggests that individuals with high environmental sensitivity are more likely to be influenced “for better and for worse” by both positive and negative environments [2,3,4].
Examining the darker aspects of this concept, it has been reported that high environmental sensitivity is linked to both physical and psychiatric symptoms. In a previous study involving a large sample size, we demonstrated that individuals with higher environmental sensitivity were more likely to self-report gastrointestinal symptoms, even after adjusting for sociodemographic characteristics [5]. Additionally, several studies have found positive associations between environmental sensitivity and physical symptoms [6,7], such as back pain, diarrhea, heartburn, and sore throat [8], as well as cardiovascular, respiratory, and gastrointestinal issues [9]. Conversely, one study indicated that there was no clear correlation between SPS and somatic symptoms [10]. Consequently, it remains a topic of debate whether environmental sensitivity is associated with physical health.
Accumulating evidence indicates that individuals with high environmental sensitivity are not only more vulnerable to worsening psychopathology in stressful environments than those with low sensitivity, but they are also less likely to experience worsening psychopathology if they can enhance protective factors (i.e., vantage sensitivity) [11,12,13]. Thus, the relationship between environmental sensitivity and physical/mental health is influenced by the quality of internal or external environmental factors.
In a previous study, we explored the correlations among individual differences in environmental sensitivity, inflammation-related biomarkers (C-reactive protein, CRP, and lipopolysaccharide-binding protein, LBP), and gut microbiome diversity as one of the internal environmental factors. CRP is recognized as a risk factor associated with various psychological and physical symptoms, including cognitive function [14,15], depression [16], cardiovascular disease [17,18,19,20,21,22], and irritable bowel syndrome (IBS) [23]. Our study revealed that the relationship between environmental sensitivity and these inflammation-related biomarkers (CRP and LBP) was not merely a simple cause-and-effect relationship; rather, the levels of both biomarkers can vary, depending on the interaction between environmental sensitivity and gut microbiome diversity [24]. Specifically, individuals with higher environmental sensitivity and lower gut microbiome diversity exhibited elevated levels of both biomarkers. In contrast, higher gut microbiome diversity did not elevate the levels of either biomarker, even among highly susceptible individuals. These findings suggest that individual differences in environmental sensitivity may play a role in the brain–gut–microbiome interaction, with gut microbiome diversity serving a protective function against inflammatory responses in individuals with high environmental sensitivity.
However, the role of specific gut bacterial taxa in moderating the link between environmental sensitivity and inflammatory reactions is not yet fully understood. Addressing this gap will enhance our understanding of why individuals with high environmental sensitivity and low gut microbiota diversity exhibit heightened inflammatory responses. Therefore, as a preliminary study, this research aims to identify for the first time key taxa in the gut microbiome that are associated with the relationship between environmental sensitivity and inflammation biomarkers.

2. Materials and Methods

2.1. Study Procedure

This study was a follow-up analysis of a previous report [24]. Initially, we recruited 110 adults who had previously participated in another study measuring fecal and/or blood biomarkers. Informed consent to participate in this study and a complete additional questionnaire was obtained from 90 of these individuals. The participants underwent a physical examination, blood tests, and fecal microbiome analysis. Two years later, they completed a web-based questionnaire. Fecal samples were unavailable from two participants, so data from 88 participants were included in the analysis. This study was preregistered with the University Hospital Medical Information Network (https://www.umin.ac.jp/english/, accessed on 10 October 2024) (Identifier: UMIN000047571) and was approved by the Ethics Committee of Meiji Co., Ltd. (Tokyo, Japan) Institutional Review Board (No. 2021-012) on 24 February 2022, in accordance with the guidelines of the Declaration of Helsinki. All participants signed the informed consent form digitally.

2.2. Environmental Sensitivity

To measure the personality traits associated with environmental sensitivity, we utilized the 10-item Japanese version of the Highly Sensitive Person Scale (HSP-J10) [25]. This scale evaluates susceptibility to both negative and positive environmental influences and includes the following items: “Do changes in your life shake you up?”, “Are you easily overwhelmed by strong sensory input?”, “Do other people’s moods affect you?”, “Do you get rattled when you have a lot to do in a short amount of time?”, “When you must compete or be observed while performing a task, do you become so nervous or shaky that you do much worse than you would otherwise?”, “Are you bothered by intense stimuli, like loud noises or chaotic scenes?”, “Are you made uncomfortable by loud noises?”, “Are you easily overwhelmed by things like bright lights, strong smells, coarse fabrics, or sirens close by?”, “Do you notice and enjoy delicate or fine scents, tastes, sounds, works of art?”, and “Are you deeply moved by the arts or music?”. Each item was rated on a 7-point Likert-type scale, ranging from 1 (strongly disagree) to 7 (strongly agree). Cronbach’s alpha, a measure of the scale’s internal consistency, was adequate at 0.85 (McDonald’s omega total = 0.86). The mean scores of the 10 items were used for the analyses. Personality traits, including environmental sensitivity [26], are psychological factors that tend to remain stable within individuals over time [27].

2.3. Blood Biomarkers

Fasting venous blood was collected, and serum was obtained through centrifugation and stored at −80 °C until analysis. Serum high-sensitivity CRP, an inflammation biomarker, was measured using the V-PLEX Vascular Injury Panel 2 Human Kit (Meso Scale Diagnostics, Rockville, MD, USA). Serum LBP, a gut permeability biomarker [28,29], was measured using an LBP Human ELISA Kit (Hycult Biotech, Uden, The Netherlands). Both biomarker data were log-transformed prior to analysis, as previously reported [30,31], due to the data not being normally distributed.

2.4. Gut Microbiome

Fecal samples were collected and prepared as previously described [24]. Briefly, participants collected feces on any day during this study. The fecal samples were homogenized using a FastPrep-24 5G (MP Biomedicals, Irvine, CA, USA) with 0.1 mm zirconia beads (EZ-Extract for DNA/RNA, AMR, Tokyo, Japan). DNA was then extracted from the fecal samples using the QIAamp DNA Stool Mini Kit (QIAGEN, Hilden, Germany) following “Protocol Q” [32], with minor modifications. The V3–V4 region of the 16S ribosomal RNA gene was amplified by PCR using universal bacterial primer sets (5′-TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCCTACGGGNGGCWGCAG-3′ and 5′-GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGACTACHVGGGTATCTAATCC-3′) and sequenced using the MiSeq Reagent kit v3 (600 cycle) (Illumina Inc., San Diego, CA, USA). The sequence data were processed using QIIME2 (version 2020.2), which included quality filtering and the identification of amplicon sequence variants (ASVs) using the DADA2 algorithm. For downstream analysis, 32,000 reads were randomly selected from each sample. Taxonomic classification was performed by conducting BLAST searches of representative ASV sequences against the SILVA 132 database. The ratios of each family and genus, as well as the alpha diversity indices, were calculated using QIIME2. Alpha diversity was evaluated for richness using observed operational taxonomic units (OTUs; observed species) and for biodiversity using Faith’s phylogenetic diversity (PD) [33]. The relative abundance of the gut microbiome at the family and genus levels was calculated. Taxa with very low prevalence at the family or genus level (<5%) were excluded from further analyses.

2.5. Data Analyses

The statistical significance level for the series of analyses was set at α = 0.05. All statistical analyses were conducted using R version 4.4.1 [34] and its interface, RStudio version 2024.04.2 [35]. Prior to the main analysis, gender differences in the taxa of the gut microbiome were also tested.
In the previous study, we found that the interactions between environmental sensitivity and alpha diversity indices (OTUs and PD) of the gut microbiome accounted for the levels of CRP and LBP. Therefore, we initially conducted a Pearson correlation analysis to examine the relationship between alpha diversity indices and gut microbiome taxa at the family and genus levels to investigate the key taxa of the gut microbiome associated with the interaction between environmental sensitivity and these biomarkers.
Second, a series of hierarchical multiple regression analyses were conducted to identify the interaction effect between environmental sensitivity and specific gut microbiome taxa. The interaction effect analysis was conducted solely for the gut microbiome taxa at the family level, where significant moderate (|r| > 0.30) or high (|r| > 0.50) correlations were observed. Following this, interaction effect analysis was performed at the genus level for both those bacterial taxa that exhibited significant interactions at the family level or significant moderate (|r| > 0.30) or high (|r| > 0.50) correlations at the genus level. The interaction effects of environmental sensitivity and gut microbiome taxa, at both the family and genus levels, on CRP and LBP were examined using hierarchical multiple regression analysis [36]. As previously reported [24], in Step 1, sex, age, BMI, environmental sensitivity, and the relative abundance of gut microbiome taxa at the family or genus level were entered as independent variables, while the two biomarkers (CRP and LBP) were entered as dependent variables. In Step 2, an interaction term representing the relationship between environmental sensitivity and the relative abundance of gut microbiome taxa was added to the independent variables entered in Step 1.
Finally, if the interaction term was significant in Step 2, a simple slope test was conducted to assess the moderating effect of the relative abundance of the gut microbiome on the relationship between environmental sensitivity and the biomarkers. Regression coefficients were estimated by substituting M − 1SD, mean, and M + 1SD for the gut microbiome taxa at either the family or genus level in the model, respectively [36].

3. Results

3.1. Clinical and Biochemical Characteristics of the Subjects

The clinical and biochemical characteristics of the 88 subjects from whom fecal samples were collected are presented in Table 1.

3.2. Relative Abundance and Prevalence of Gut Microbiome Taxa, Along with the Correlations Between Alpha Diversity Indices and Bacterial Taxa

The relative abundance and prevalence of gut microbiome taxa at the family and genus levels are presented in Table 2 and Table 3, respectively, both of which exclude taxa with a prevalence of less than 5%.
Females showed significantly higher means of relative abundance in Eggerthellaceae, Coriobacteriales unclassified family, Marinifilaceae, Porphyromonadaceae, Rikenellaceae, Christensenellaceae, Clostridiales vadin BB60 group, Defluviitaleaceae, Eubacteriaceae, Clostridiales Family XIII, and Ruminococcaceae and Akkermansiaceae at the family level, as well as in Varibaculum, Gordonibacter, Coriobacteriales unclassified family unclassified genus, Butyricimonas, Porphyromonas, Alistipes, Christensenellaceae R-7 group, Christensenellaceae uncultured bacterium, Christensenellaceae unclassified genus, Clostridiales vadin BB60 group uncultured bacterium, Defluviitaleaceae UCG-011, Anaerofustis, Eubacterium, Anaerococcus, Family XIII AD3011 group, [Eubacterium] brachy group, Eisenbergiella, GCA900066575, Lachnospiraceae NK4A136 group, Shuttleworthia, Peptococcaceae uncultured bacterium, Anaerofilum, Anaerotruncus, DTU089, Oscillibacter, Ruminiclostridium, Ruminococcaceae UCG-005, Subdoligranulum, UBA1819, Ruminococcaceae uncultured bacterium, and Akkermansia at the genus level than males. Males showed significantly higher means of relative abundance in Veillonellaceae at the family level, as well as in Actinomyces, Dorea, Lachnoclostridium, Lachnospiraceae UCG-004, Lachnospiraceae UCG-010, Butyricicoccus, and Megasphaera at the genus level than females.
We identified significant moderate to high correlations between alpha diversity indices (OTUs and/or PD) and gut microbiome taxa at the family level in the following 17 taxa: Methanobacteriaceae, Coriobacteriales Incertae Sedis, Coriobacteriales unclassified family, Barnesiellaceae, Marinifilaceae, Rikenellaceae, Christensenellaceae, Clostridiales vadinBB60 group, Defluviitaleaceae, Family XIII (Clostridiales), Lachnospiraceae, Ruminococcaceae, Clostridiales unclassified family, DTU014 uncultured bacterium, Synergistaceae, Mollicutes RF39 uncultured bacterium, and Akkermansiaceae. Furthermore, we identified significant moderate to high correlations between alpha diversity indices (OTUs and/or PD) and gut microbiome taxa at the genus level in the following 63 taxa: Methanobrevibacter, Varibaculum, Enterorhabdus, Senegalimassilia, Coriobacteriales unclassified family unclassified genus, Barnesiella, Butyricimonas, Odoribacter, Alistipes, Christensenellaceae R-7 group, Christensenellaceae uncultured bacterium, Christensenellaceae unclassified genus, Clostridiales vadinBB60 group uncultured bacterium, Defluviitaleaceae UCG-011, Family XIII AD3011 group, Family XIII UCG-001, Coprococcus 1, Coprococcus 2, Eisenbergiella, GCA900066575, Lachnoclostridium, Lachnospiraceae FCS020 group, Lachnospiraceae NK4A136 group, Marvinbryantia, Sellimonas, Shuttleworthia, [Ruminococcus] gnavus group, Peptococcaceae uncultured bacterium, Romboutsia, Anaerofilum, Anaerotruncus, Butyricicoccus, DTU089, GCA-900066225, Hydrogenoanaerobacterium, Negativibacillus, Papillibacter, Ruminiclostridium, Ruminiclostridium 1, Ruminococcaceae NK4A214 group, Ruminococcaceae UCG-002, Ruminococcaceae UCG-005, Ruminococcaceae UCG-007, Ruminococcaceae UCG-009, Ruminococcaceae UCG-010, Ruminococcaceae UCG-014, Ruminococcus 1, Ruminococcus 2, UBA1819, [Eubacterium] coprostanoligenes group, Ruminococcaceae unclassified genus, Clostridiales unclassified family unclassified genus, DTU014 uncultured bacterium uncultured bacterium, Holdemania, Erysipelotrichaceae unclassified genus, Veillonella, Coriobacteriales Incertae Sedis uncultured bacterium, Desulfovibrio, Desulfovibrionaceae uncultured bacterium, Burkholderiaceae unclassified genus, Cloacibacillus, Mollicutes RF39 uncultured bacterium uncultured bacterium, and Akkermansia.

3.3. Interaction Between Environmental Sensitivity and Gut Microbiome Taxa at the Family Level

  • Effect on CRP
We examined the interaction effects using hierarchical multiple regression analysis exclusively for the gut microbiome taxa that exhibited significant moderate (|r| > 0.30) or high (|r| > 0.50) correlations. Among the 17 taxa, the interaction term between environmental sensitivity and the family Marinifilaceae was identified as a significant predictor for CRP (β = −0.183, p < 0.05) (Table 4). The coefficient of determination, R2, increased from that observed in Step 1 when the interaction term between environmental sensitivity and the family Marinifilaceae was incorporated in Step 2 (ΔR2 = 0.033, p < 0.05). The coefficient of determination for the final regression model in Step 2 was R2 = 0.375 (p < 0.01). The interaction between environmental sensitivity and the other bacterial taxa did not show a significant association with CRP.
  • Effect on LBP
Among the 17 taxa, the interaction term between environmental sensitivity and the family Barnesiellaceae emerged as a significant predictor of LBP (β = −0.200, p < 0.05) (Table 5). The coefficient of determination, R2, increased from that observed in Step 1 when the interaction term between environmental sensitivity and family Barnesiellaceae was included in Step 2 (ΔR2 = 0.036, p < 0.05). The final regression model in Step 2 yielded a coefficient of determination of R2 = 0.340 (p < 0.01). Similar results were observed for the family AkkermansiaceaeR2 = 0.035, p < 0.05) (Table 6), family MarinifilaceaeR2 = 0.030, p = 0.062) (Table 7), family DefluviitaleaceaeR2 = 0.027, p < 0.05) (Table 8), and family XIIIR2 = 0.023, p = 0.099) (Table 9). The p-values for the interaction between environmental sensitivity and the other bacterial taxa were >0.1 in relation to LBP.

3.4. Interaction Between Environmental Sensitivity and Gut Microbiome Taxa at the Genus Level

  • Effect on CRP
We examined the interaction effects using hierarchical multiple regression analysis for the gut microbiome taxa (genus) within the family where a significant interaction effect was observed (family Marinifilaceae) or for the taxa that exhibited significant moderate (|r| > 0.30) or high (|r| > 0.50) correlations at the genus level. The interaction term between environmental sensitivity and genus Butyricimonas emerged as a significant predictor for CRP (β = −0.218, p < 0.05) (Table 10). The coefficient of determination, R2, increased from that in Step 1 when the interaction term between environmental sensitivity and genus Butyricimonas was added in Step 2 (ΔR2 = 0.044, p < 0.05). The final regression model in Step 2 yielded a coefficient of determination of R2 = 0.385 (p < 0.01). In contrast, the interaction between environmental sensitivity and the other bacterial taxa did not show a significant association with CRP.
  • Effect on LBP
We conducted hierarchical multiple regression analysis on the gut microbiome taxa (genus) associated with families where a significant interaction effect was observed (family Barnesiellaceae and family Akkermansiaceae) or for the taxa that exhibited significant moderate (|r| > 0.30) or high (|r| > 0.50) correlations at the genus level. The interaction between environmental sensitivity and genus Coprobacter was found to be a significant predictor for LBP (β = −0.233, p < 0.05) (Table 11). The coefficient of determination, R2, increased from that in Step 1 when the interaction term between environmental sensitivity and genus Coprobacter was added in Step 2 (ΔR2 = 0.042, p < 0.05). The coefficient of determination for the final regression model, Step 2, was R2 = 0.331 (p < 0.01). Similar findings were observed for genus BarnesiellaR2 = 0.027, p = 0.077) (Table 12), genus AkkermansiaR2 = 0.035, p < 0.05) (Table 13), genus Family XIII AD3011 groupR2 = 0.053, p < 0.05) (Table 14), genus GCA-900066225R2 = 0.043, p < 0.05) (Table 15), and genus Ruminiclostridium 1R2 = 0.035, p < 0.05) (Table 16).

3.5. Simple Slope Analysis

We conducted simple slope tests on the gut microbiome taxa that showed an interaction effect with CRP (Figure 1) and LBP (Figure 2). These taxa include family Marinifilaceae and genus Butyricimonas (associated with CRP), and family Barnesiellaceae, family Akkermansiaceae, genus Coprobacter, genus Akkermansia, genus Family XIII AD3011 group, genus GCA-900066225, and genus Ruminiclostridium 1 (associated with LBP).
For individuals with high environmental sensitivity, there was no significant association with CRP when family Marinifilaceae abundance was high (M + 1SD; β = −0.110, p = 0.496). However, CRP levels were significantly elevated when the abundance of family Marinifilaceae was low (M − 1SD; β = 0.434, p = 0.008) (Figure 1A). Similar results were observed for other taxa. When genus Butyricimonas abundance was high (M + 1SD; β = −0.020, p = 0.855), no significant association with CRP was found, but when its abundance was low (M − 1SD; β = 0.392, p = 0.003), CRP levels were significantly higher (Figure 1B).
For LBP, individuals with high environmental sensitivity showed no association when family Barnesiellaceae was abundant (M + 1SD; β = −0.127, p = 0.419), but LBP levels were significantly elevated when the abundance of family Barnesiellaceae was low (M − 1SD; β = 0.371, p = 0.011) (Figure 2A). Similarly, in individuals with high environmental sensitivity, no association with LBP was found when family Akkermansiaceae abundance was high (M + 1SD; β = −0.143, p = 0.386), but LBP levels were elevated when its abundance was low (M − 1SD; β = 0.362, p = 0.015) (Figure 2B). Individuals with high environmental sensitivity showed no association with LBP when genus Coprobacter abundance was high (M + 1SD; β = −0.077, p = 0.560), but LBP levels were significantly higher when its abundance was low (M − 1SD; β = 0.402, p = 0.009) (Figure 2C). Similarly, individuals with high environmental sensitivity showed no association with LBP when genus Akkermansia abundance was high (M + 1SD; β = −0.143, p = 0.386), but LBP was elevated when genus Akkermansia abundance was low (M − 1SD; β = 0.362, p = 0.015) (Figure 2D). Individuals with high environmental sensitivity showed no association with LBP when genus Family XIII AD3011 group abundance was high (M + 1SD; β = −0.126, p = 0.376), but LBP was elevated when genus Family XIII AD3011 group abundance was low (M − 1SD; β = 0.393, p = 0.004) (Figure 2E). Similarly, individuals with high environmental sensitivity showed no association with LBP when genus GCA-900066225 abundance was high (M + 1SD; β = −0.238, p = 0.218), but LBP was elevated when genus GCA-900066225 abundance was low (M − 1SD; β = 0.420, p = 0.006) (Figure 2F). Individuals with high environmental sensitivity showed no association with LBP when genus Ruminiclostridium 1 abundance was high (M + 1SD; β = −0.140, p = 0.396), but LBP was elevated when genus Ruminiclostridium 1 abundance was low (M − 1SD; β = 0.370, p = 0.015) (Figure 2G).

4. Discussion

This study aimed to investigate the key taxa of the gut microbiome associated with the interaction between environmental sensitivity and inflammation biomarkers. We identified an interaction between environmental sensitivity and the family Marinifilaceae (genus Butyricimonas), which was associated with CRP, an inflammation biomarker. Additionally, we found interactions between environmental sensitivity and the family Barnesiellaceae (genus Coprobacter), the family Akkermansiaceae (genus Akkermansia), the genus Family XIII AD3011 group, the genus GCA-900066225, and the genus Ruminiclostridium 1, all of which are associated with LBP (a gut permeability biomarker). Simple slope tests on these taxa indicated that individuals with high environmental sensitivity did not exhibit significant associations with CRP or LBP when the abundance of these taxa was high. Conversely, elevated levels of these biomarkers were observed when the abundance of the taxa was low. These findings suggest that these taxa play a protective role in moderating inflammation and gut permeability, acting as key components of the gut microbiome that are associated with the interaction between environmental sensitivity and biomarkers of inflammation or gut permeability. Given existing reports linking higher levels of CRP or LBP to increased stress-related psychiatric symptoms, such as depression and anxiety [37,38,39], as well as physical symptoms, including IBS [23], these taxa may play a crucial role in the development or worsening of these symptoms among individuals with high environmental sensitivity.
This study indicated that individual differences in environmental sensitivity may result in different levels of inflammation and gut permeability, depending on the gut microbiome. The serotonin transporter gene polymorphism (5-HTTLPR), one of the genes related to environmental sensitivity, is associated with cortisol responsiveness to acute psychosocial stress [40,41], which suggests that hypothalamic–pituitary–adrenal (HPA) axis responsiveness to the internal and/or external environmental stimuli is involved in individual differences in environmental sensitivity. Several animal and human studies indicate that overactivation of HPA axis in response to chronic stressful stimuli increases gut permeability [42,43,44] and that the gut microbiome can affect the HPA axis [45,46,47,48,49,50,51,52,53], which suggests that the gut microbiome can affect gut permeability through the HPA axis. In contrast, the gut microbiome can also affect gut permeability independently of the HPA axis [54]. With high gut permeability, a lipopolysaccharide (endotoxin) derived from bacteria enters the bloodstream through the intestinal tract and induces inflammation [55]. Therefore, the plausible mechanisms of the interaction between environmental sensitivity and the gut microbiome are as follows. First, the gut microbiome may influence gut permeability and inflammation through the HPA axis as an internal environmental factor; second, the gut microbiome may act as a moderating factor and influence the gut permeability and inflammation caused by HPA axis activation in response to other stressful stimuli.
The genus Butyricimonas is a well-known butyrate-producing bacterium in the intestinal tract [56]. Butyrate has been shown to have beneficial effects on both psychological and physical health. In animal models of depression induced by chronic mild stress or maternal deprivation, butyrate exhibited antidepressant effects [57,58]. In vitro and in vivo studies suggest that butyrate may play a significant role in regulating neuromediator gene expression within the enteric nervous system and in gastrointestinal functions, such as motility [59]. Furthermore, butyrate possesses anti-inflammatory properties [60], which operate through several mechanisms [42,55,61,62,63,64,65,66], including the maintenance of the intestinal barrier [55,66] and the attenuation of the HPA axis [42]. Indeed, the present study demonstrated a tendency for interaction between environmental sensitivity and the genus Butyricimonas, which is associated with the gut permeability biomarker LBP (Supplementary Table S1, Supplementary Figure S1). Therefore, the various functions of butyrate may help explain how the family Marinifilaceae (genus Butyricimonas) plays a protective role in inflammation among individuals with high environmental sensitivity.
The genus Akkermansia is recognized for its ability to enhance intestinal barrier integrity by stimulating mucin production in both human and animal models [54,67]. Okuma et al. [68] reported that several taxa, including the genera Coprobacter and Butyricimonas, were found to be less abundant in the male depression group compared to the male control group. The genus Coprobacter produces propionic and acetic acids [69]. Both propionic [70] and acetic acids [71] also exhibit protective effects on the intestinal barrier. There are limited reports on the genus Family XIII AD3011 group, genus GCA-900066225, and genus Ruminiclostridium 1. However, Shang et al. [72] reported that the gut microflora, including some taxa, such as Family XIII AD3011 group, was conducive to improving disease resistance in pigs. Mao et al. [73] reported that the relative abundance of GCA-900066225 was positively associated with the cecal short-chain fatty acid levels and colonic gut integrity-related marker in mice. Cao et al. [74] reported that Ruminiclostridium 1 was negatively correlated with inflammation markers and positively correlated with acetic acid and propionic acid in the ileum of mice. Consequently, these taxa might contribute to gut integrity through these mechanisms in individuals with high environmental sensitivity.

5. Possible Limitations and Future Directions

This study has several possible limitations. First, environmental sensitivity was assessed using a questionnaire. Although HSP-J10 is a well-validated scale using a large sample size and experimental manipulation [25], the integration of alternative measurement methods, such as polygenic scores derived from genome-wide analysis [75] or evaluations of neurophysiological reactivity during stressful tasks [76], could provide comprehensive insights and strengthen our findings. Second, this study utilized a cross-sectional design. Generally, cross-sectional study designs are often used to evaluate the associations between variables in microbiome research [77,78,79], as it is technically difficult to reproduce a specific gut microbiome through interventions in humans. Future longitudinal studies would allow for a better exploration of the causal relationships. Third, several factors, such as diet, might affect the results as confounding factors. In particular, higher intakes of fruit and vegetables were reported to be associated with lower CRP levels [80], a lower risk of IBD [81], and gut bacterial composition and diversity [82]. In contrast, in the interaction effect analysis, even when frequencies of fruit and vegetable intakes were added as independent variables, similar interaction effects between environmental sensitivity and the specific taxa in the gut microbiome were observed (see Supplementary Tables S2–S10 for details). Finally, we could not explore the precise mechanism involved due to the nature of this cross-sectional study. However, based on our results, we speculated that short-chain fatty acids (such as butyric, propionic, and acetic acids) produced by the gut microbiome and/or the factors involved in the HPA axis, such as cortisol, might be involved in the interaction. Future studies could strengthen our findings by measuring levels of short-chain fatty acids (such as butyric, propionic, and acetic acids) in fecal samples and/or cortisol levels in samples, such as hair.

6. Conclusions

As a preliminary study, the present research suggests that the family Marinifilaceae (genus Butyricimonas), family Barnesiellaceae (genus Coprobacter), family Akkermansiaceae (genus Akkermansia), genus Family XIII AD3011 group, genus GCA-900066225, and genus Ruminiclostridium 1 are key taxa in the gut microbiome associated with the relationship between environmental sensitivity and biomarkers of inflammation or gut permeability. Specifically, for individuals with high environmental sensitivity, these taxa might serve as one of the protective factors against inflammation and intestinal permeability. Further in-depth studies are required to confirm these associations and elucidate the underlying mechanisms.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/microorganisms13010185/s1, Figure S1: Moderating effects of the genus Butyricimonas on the relationship between environmental sensitivity and lipopolysaccharide-binding protein (LBP) (n = 88); Table S1: Interaction effects between environmental sensitivity and the genus Butyricimonas predicting LBP (n = 88); Table S2: Interaction effects between environmental sensitivity and family Marinifilaceae predicting CRP (n = 88); Table S3: Interaction effects between environmental sensitivity and genus Butyricimonas predicting CRP (n = 88); Table S4: Interaction effects between environmental sensitivity and family Barnesiellaceae predicting LBP (n = 88); Table S5: Interaction effects between environmental sensitivity and family Akkermansiaceae predicting LBP (n = 88); Table S6: Interaction effects between environmental sensitivity and genus Coprobacter predicting LBP (n = 88); Table S7: Interaction effects between environmental sensitivity and genus Akkermansia predicting LBP (n = 88); Table S8: Interaction effects between environmental sensitivity and genus Family XIII AD3011 group predicting LBP (n = 88); Table S9: Interaction effects between environmental sensitivity and genus GCA-900066225 predicting LBP (n = 88); Table S10: Interaction effects between environmental sensitivity and genus Ruminiclostridium 1 predicting LBP (n = 88).

Author Contributions

Conceptualization, S.T. and S.I.; formal analysis, S.T., S.I., M.Y. and Y.S.; data curation, S.T., S.I., M.Y. and Y.S.; writing—original draft preparation, S.T. and S.I.; writing—review and editing, S.T, S.I. and M.M.; visualization, S.I.; supervision, S.T. and M.M. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Institutional Review Board Statement

This study was approved by the Ethics Committee of Meiji Co., Ltd. (Tokyo, Japan) Institutional Review Board (No. 2021-012) on 24 February 2022, in accordance with the guidelines of the Declaration of Helsinki.

Informed Consent Statement

Informed consent was obtained from all subjects involved in the study.

Data Availability Statement

The original contributions presented in this study are included in the article/Supplementary Material. Further inquiries can be directed to the corresponding author.

Conflicts of Interest

S. Takasugi is a full-time employee of Meiji Co., Ltd. M. Yasuda, Y. Saito, and M. Morifuji are full-time employees of Meiji Holdings Co., Ltd.

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Figure 1. Moderating effects of gut microbiome taxa on the relationship between environmental sensitivity and C-reactive protein (CRP) (n = 88). (A) Family Marinifilaceae, (B) genus Butyricimonas.
Figure 1. Moderating effects of gut microbiome taxa on the relationship between environmental sensitivity and C-reactive protein (CRP) (n = 88). (A) Family Marinifilaceae, (B) genus Butyricimonas.
Microorganisms 13 00185 g001
Figure 2. Moderating effects of gut microbiome taxa on the relationship between environmental sensitivity and lipopolysaccharide-binding protein (LBP) (n = 88). (A) Family Barnesiellaceae, (B) family Akkermansiaceae, (C) genus Coprobacter, (D) genus Akkermansia, (E) genus Family XIII AD3011 group, (F) genus GCA-900066225, (G) genus Ruminiclostridium 1.
Figure 2. Moderating effects of gut microbiome taxa on the relationship between environmental sensitivity and lipopolysaccharide-binding protein (LBP) (n = 88). (A) Family Barnesiellaceae, (B) family Akkermansiaceae, (C) genus Coprobacter, (D) genus Akkermansia, (E) genus Family XIII AD3011 group, (F) genus GCA-900066225, (G) genus Ruminiclostridium 1.
Microorganisms 13 00185 g002aMicroorganisms 13 00185 g002bMicroorganisms 13 00185 g002c
Table 1. Clinical and biochemical characteristics of the subjects.
Table 1. Clinical and biochemical characteristics of the subjects.
Mean ± SD95% CI
Age (years)42 ± 1040–44
Sex (female/male)44/44 (50%/50%)
Body weight (kg)62.6 ± 12.760.0–65.3
Height (m)1.65 ± 0.081.63–1.67
BMI (kg/m2)22.8 ± 3.422.1–23.5
Environmental sensitivity4.4 ± 1.04.2–4.6
CRP (ng/mL)7994 ± 310401509–14480
LBP (µg/mL)13.6 ± 4.012.8–14.5
Log-normalized CRP7.33 ± 1.457.03–7.64
Log-normalized LBP2.58 ± 0.262.52–2.63
Note. SD: standard deviation; CI: confidence interval; BMI: body mass index; CRP: C-reactive protein, LBP: lipopolysaccharide-binding protein.
Table 2. Relative abundance of the gut microbiome at the family level and Pearson correlation coefficients between alpha diversity indices and gut microbiome taxa.
Table 2. Relative abundance of the gut microbiome at the family level and Pearson correlation coefficients between alpha diversity indices and gut microbiome taxa.
Prevalence
(%)
Relative Abundance
(%)
Correlation Coefficients
OTUs PD
Mean SDrr
Family
Methanobacteriaceae8.00.035±0.1820.380**0.399**
Actinomycetaceae93.20.050±0.037−0.193−0.138
Bifidobacteriaceae98.915.542±10.569−0.197−0.199
Corynebacteriaceae15.90.003±0.015−0.020 −0.039
Micrococcaceae28.40.005±0.014−0.164 −0.159
Atopobiaceae39.80.086±0.2200.105 0.081
Coriobacteriaceae89.86.444±4.7690.004 −0.047
Coriobacteriales Incertae Sedis38.60.052±0.1150.405**0.341**
Eggerthellaceae98.90.728±0.5700.271*0.203
Coriobacteriales unclassified family20.50.036±0.1210.320**0.265*
Bacteroidaceae100.011.113±6.507−0.217*−0.115
Barnesiellaceae64.80.420±0.6030.323**0.361**
Marinifilaceae81.80.161±0.2180.510**0.485**
Muribaculaceae18.20.085±0.2970.120 0.075
Porphyromonadaceae8.00.002±0.0090.134 0.136
Prevotellaceae60.21.561±3.280−0.059 −0.143
Rikenellaceae87.50.923±0.8900.613**0.586**
Tannerellaceae90.91.444±2.328−0.122 −0.164
Bacteroidia unclassified order unclassified family6.80.004±0.0200.277**0.288**
Campylobacteraceae5.70.004±0.0250.000 0.083
Bacillaceae47.70.278±0.8380.058 0.055
Bacillales Family XI53.40.011±0.019−0.199−0.160
Aerococcaceae5.70.001±0.002−0.097 −0.127
Carnobacteriaceae48.90.010±0.013−0.280**−0.256*
Enterococcaceae27.30.021±0.059−0.261*−0.274**
Lactobacillaceae50.00.100±0.298−0.148 −0.156
Leuconostocaceae9.10.009±0.0480.281**0.210*
Streptococcaceae98.91.837±2.553−0.248*−0.229*
Christensenellaceae65.90.532±1.0690.669**0.609**
Clostridiaceae 161.40.259±0.8480.298**0.221*
Clostridiales vadin BB60 group26.10.013±0.0380.519**0.509**
Defluviitaleaceae37.50.011±0.0190.710**0.653**
Eubacteriaceae61.40.053±0.1290.044 0.096
Clostridiales Family XI33.00.011±0.0380.162 0.224*
Clostridiales Family XIII90.90.246±0.2690.603**0.570**
Lachnospiraceae100.026.567±9.196−0.359**−0.369**
Peptococcaceae36.40.029±0.1200.276**0.258*
Peptostreptococcaceae97.71.497±1.8640.283**0.225*
Ruminococcaceae100.018.208±8.0740.691**0.639**
Clostridiales unclassified family13.60.003±0.0120.434**0.405**
DTU014 uncultured bacterium11.40.002±0.0070.477**0.491**
Erysipelotrichaceae100.02.792±2.8010.1850.200
Acidaminococcaceae80.71.184±1.222−0.196−0.103
Veillonellaceae90.94.426±6.978−0.286**−0.255*
Fusobacteriaceae43.20.168±0.479−0.170 −0.117
Saccharimonadaceae22.70.003±0.007−0.097 −0.106
Saccharimonadales uncultured bacterium5.70.001±0.0030.151 0.158
Rhodospirillales uncultured bacterium14.80.028±0.1510.1820.178
Desulfovibrionaceae81.80.129±0.1680.236*0.274**
Succinivibrionaceae5.70.002±0.011−0.101 −0.090
Burkholderiaceae86.40.232±0.362−0.215*−0.077
Enterobacteriaceae81.80.349±0.691−0.118 −0.017
Pasteurellaceae33.00.035±0.163−0.092 −0.123
Synergistaceae18.20.020±0.1190.370**0.351**
Izimaplasmatales unclassified family6.80.003±0.0170.151 0.266*
Mollicutes RF39 uncultured bacterium9.10.006±0.0280.425**0.400**
Akkermansiaceae56.82.211±4.2470.279**0.333**
Note. SD: standard deviation; OTUs: observed operational taxonomic units; PD: Faith’s phylogenetic diversity, ** p < 0.01; * p < 0.05; † p < 0.10.
Table 3. Relative abundance of the gut microbiome at the genus level and Pearson correlation coefficients between alpha diversity indices and gut microbiome taxa.
Table 3. Relative abundance of the gut microbiome at the genus level and Pearson correlation coefficients between alpha diversity indices and gut microbiome taxa.
Prevalence (%)Relative Abundance
(%)
Correlation Coefficients
OTUs PD
Mean SDrr
Genus
Methanobrevibacter8.00.035±0.1820.380**0.399**
Actinomyces93.20.048±0.036−0.270*−0.201
F03325.70.001±0.0020.018 0.009
Varibaculum6.80.002±0.0070.302**0.235*
Bifidobacterium98.915.539±10.570−0.197−0.199
Corynebacterium11.40.003±0.015−0.047 −0.062
Rothia28.40.005±0.014−0.164 −0.159
Atopobium11.40.001±0.004−0.164 −0.154
Olsenella27.30.075±0.2100.091 0.066
Collinsella89.86.410±4.777−0.005 −0.054
Coriobacteriaceae unclassified genus8.00.033±0.2060.2040.152
Raoultibacter22.70.005±0.0110.262*0.238*
Coriobacteriales Incertae Sedis uncultured bacterium28.40.047±0.1120.386**0.324**
Adlercreutzia51.10.077±0.1570.291**0.195
Eggerthella88.60.337±0.375−0.140 −0.099
Enterorhabdus23.90.036±0.0900.312**0.291**
Gordonibacter56.80.034±0.0580.271*0.288**
Senegalimassilia15.90.073±0.1940.351**0.307**
Slackia28.40.108±0.3370.020 −0.031
Eggerthellaceae uncultured bacterium12.50.049±0.1580.234*0.162
Eggerthellaceae unclassified genus39.80.015±0.0340.168 0.133
Coriobacteriales unclassified family unclassified genus20.50.036±0.1210.320**0.265*
Bacteroides100.011.113±6.507−0.217*−0.115
Barnesiella51.10.355±0.5610.302**0.344**
Coprobacter43.20.058±0.1410.138 0.142
Barnesiellaceae uncultured bacterium18.20.006±0.0200.271*0.224*
Butyricimonas55.70.056±0.0890.355**0.402**
Odoribacter78.40.106±0.1680.473**0.417**
Muribaculaceae uncultured bacterium18.20.085±0.2970.120 0.073
Porphyromonas8.00.002±0.0090.134 0.136
Alloprevotella9.10.193±1.244−0.160 −0.158
Paraprevotella20.50.203±0.566−0.060 −0.078
Prevotella15.90.006±0.0280.175 0.180
Prevotella 218.20.245±1.096−0.114 −0.146
Prevotella 923.90.808±2.2280.054 −0.047
Alistipes86.40.914±0.8950.613**0.586**
Parabacteroides90.91.444±2.328−0.122 −0.164
Bacteroidia unclassified order unclassified family unclassified genus6.80.004±0.0200.277**0.288**
Campylobacter5.70.004±0.0250.000 0.083
Bacillus47.70.278±0.8380.058 0.055
Gemella53.40.011±0.019−0.199−0.160
Abiotrophia5.70.001±0.002−0.097 −0.127
Granulicatella48.90.010±0.013−0.280**−0.256*
Enterococcus27.30.021±0.059−0.261*−0.274**
Lactobacillus50.00.091±0.235−0.134 −0.150
Leuconostoc8.00.006±0.0380.274**0.212*
Lactococcus25.00.036±0.2600.236*0.188
Streptococcus98.91.801±2.555−0.272*−0.247*
Christensenellaceae R-7 group59.10.492±1.0260.657**0.597**
Christensenellaceae uncultured bacterium50.00.030±0.0650.558**0.512**
Christensenellaceae unclassified genus44.30.010±0.0160.394**0.376**
Clostridium sensu stricto 161.40.259±0.8480.298**0.221*
Clostridiales vadin BB60 group uncultured bacterium26.10.013±0.0340.521**0.511**
Defluviitaleaceae UCG-01137.50.011±0.0190.710**0.653**
Anaerofustis30.70.005±0.0090.266*0.295**
Eubacterium37.50.048±0.1270.027 0.079
Anaerococcus8.00.001±0.0030.257*0.251*
Ezakiella10.20.002±0.0090.132 0.145
Finegoldia5.70.001±0.002−0.021 −0.038
Parvimonas15.90.005±0.0250.113 0.184
Peptoniphilus11.40.002±0.0090.172 0.230*
Family XIII AD3011 group75.00.156±0.2070.606**0.549**
Family XIII UCG-00156.80.029±0.0390.464**0.459**
[Eubacterium] brachy group70.50.042±0.0610.244*0.246*
[Eubacterium] nodatum group40.90.017±0.0570.086 0.127
Anaerostipes100.01.914±1.880−0.181−0.198
Blautia100.06.486±4.263−0.253*−0.158
CAG-5621.60.047±0.1330.1960.157
Coprococcus 135.20.104±0.1850.327**0.242*
Coprococcus 210.20.115±0.5000.313**0.218*
Coprococcus 342.00.346±0.6000.086 0.012
Dorea79.51.331±1.363−0.137 −0.163
Eisenbergiella50.00.052±0.1190.212*0.323**
Fusicatenibacter85.22.052±2.045−0.195−0.290**
GCA90006657546.60.016±0.0220.479**0.410**
Howardella5.70.006±0.0310.147 0.159
Hungatella39.80.019±0.034−0.165 −0.043
Lachnoclostridium100.01.356±1.096−0.406**−0.286**
Lachnospira69.30.458±0.761−0.230*−0.295**
Lachnospiraceae FCS020 group64.80.094±0.1320.316**0.278**
Lachnospiraceae ND3007 group73.90.283±0.3360.064 −0.036
Lachnospiraceae NK4A136 group77.30.391±0.7370.302**0.271*
Lachnospiraceae UCG-00119.30.050±0.1660.129 0.073
Lachnospiraceae UCG-00453.40.078±0.168−0.179−0.192
Lachnospiraceae UCG-00814.80.004±0.0120.148 0.077
Lachnospiraceae UCG-01036.40.008±0.016−0.110 −0.143
Lactonifactor44.30.009±0.0140.100 0.065
Marvinbryantia43.20.072±0.1500.429**0.389**
Roseburia89.80.790±1.062−0.106 −0.198
Sellimonas65.90.266±0.432−0.332**−0.267*
Shuttleworthia44.30.030±0.0550.313**0.330**
Tyzzerella40.90.058±0.1220.122 0.176
Tyzzerella 327.30.107±0.274−0.030 −0.073
Tyzzerella 429.50.205±0.527−0.262*−0.124
[Eubacterium] eligens group33.00.114±0.3030.077 0.032
[Eubacterium] fissicatena group50.00.012±0.0170.066 0.203
[Eubacterium] hallii group88.61.587±1.3550.020 −0.042
[Eubacterium] ruminantium group12.50.163±0.5630.240*0.159
[Eubacterium] ventriosum group78.40.333±0.3890.222*0.093
[Eubacterium] xylanophilum group14.80.014±0.0560.162 0.218*
[Ruminococcus] gauvreauii group60.20.413±0.7890.065 −0.002
[Ruminococcus] gnavus group86.41.248±2.124−0.537**−0.387**
[Ruminococcus] torques group96.61.620±1.6640.086 0.076
Lachnospiraceae uncultured bacterium96.60.622±0.592−0.076 −0.100
Lachnospiraceae unclassified genus100.03.695±2.897−0.094 −0.155
Peptococcus11.40.019±0.1160.162 0.146
Peptococcaceae uncultured bacterium31.80.011±0.0250.566**0.559**
Intestinibacter75.00.347±0.593−0.026 −0.019
Peptostreptococcus9.10.001±0.004−0.145 0.008
Romboutsia92.01.062±1.5400.369**0.301**
Terrisporobacter18.20.036±0.1490.097 0.055
Anaerofilum17.00.002±0.0050.378**0.300**
Anaerotruncus51.10.015±0.0210.413**0.461**
Butyricicoccus98.90.624±0.575−0.346**−0.347**
Candidatus Soleaferrea12.50.003±0.010−0.029 0.123
DTU08975.00.034±0.0360.352**0.333**
Faecalibacterium96.64.966±3.755−0.127 −0.148
Flavonifractor92.00.224±0.268−0.247*−0.094
Fournierella20.50.011±0.044−0.001 0.090
GCA-90006622553.40.017±0.0310.426**0.422**
Hydrogenoanaerobacterium6.80.002±0.0110.337**0.325**
Negativibacillus68.20.093±0.1540.415**0.491**
Oscillibacter92.00.279±0.3320.233*0.290**
Oscillospira10.20.011±0.0610.093 0.061
Papillibacter8.00.001±0.0040.314**0.290**
Ruminiclostridium47.70.011±0.0210.452**0.379**
Ruminiclostridium 19.10.001±0.0050.368**0.299**
Ruminiclostridium 598.90.852±1.2560.284**0.217*
Ruminiclostridium 613.60.173±1.0060.127 0.180
Ruminiclostridium 983.00.213±0.2150.156 0.251*
Ruminococcaceae NK4A214 group53.40.292±0.6920.462**0.414**
Ruminococcaceae UCG-00259.10.704±1.1700.550**0.544**
Ruminococcaceae UCG-00331.80.034±0.0910.216*0.245*
Ruminococcaceae UCG-00425.00.130±0.2390.124 0.207
Ruminococcaceae UCG-00563.60.323±0.5310.647**0.587**
Ruminococcaceae UCG-0078.00.001±0.0040.426**0.416**
Ruminococcaceae UCG-00943.20.017±0.0290.388**0.329**
Ruminococcaceae UCG-01031.80.040±0.1090.606**0.533**
Ruminococcaceae UCG-01388.60.479±0.5080.059 0.023
Ruminococcaceae UCG-01428.40.590±1.7810.433**0.404**
Ruminococcus 148.90.719±1.1130.390**0.318**
Ruminococcus 254.51.820±2.6360.335**0.349**
Subdoligranulum95.53.194±2.7710.150 0.084
UBA181983.00.116±0.1910.352**0.356**
[Eubacterium] coprostanoligenes group76.11.308±1.7010.623**0.558**
Ruminococcaceae uncultured bacterium95.50.795±1.9910.214*0.251*
Ruminococcaceae unclassified genus81.80.098±0.1760.400**0.344**
Clostridiales unclassified family unclassified genus13.60.003±0.0120.434**0.405**
DTU014 uncultured bacterium uncultured bacterium11.40.002±0.0070.477**0.491**
Catenibacterium11.40.515±1.7060.173 0.140
Catenisphaera12.50.059±0.3150.1930.144
Dielma13.60.002±0.0070.106 0.107
Erysipelatoclostridium88.60.398±0.606−0.127 −0.024
Erysipelotrichaceae UCG-00336.40.511±1.0200.047 0.024
Faecalitalea35.20.109±0.297−0.127 −0.070
Holdemanella21.60.820±2.0320.054 0.079
Holdemania63.60.023±0.0280.345**0.349**
Solobacterium23.90.014±0.105−0.054 0.031
Turicibacter70.50.163±0.3090.260*0.189
[Clostridium] innocuum group81.80.055±0.072−0.281**−0.139
Erysipelotrichaceae unclassified genus77.30.100±0.1580.345**0.414**
Acidaminococcus35.20.309±0.820−0.207−0.221*
Phascolarctobacterium72.70.872±1.024−0.068 0.054
Allisonella26.10.029±0.077−0.152 −0.173
Dialister44.30.899±1.8700.047 0.014
Megamonas26.11.667±6.081−0.130 −0.093
Megasphaera35.20.946±2.058−0.213*−0.199
Mitsuokella12.50.321±1.466−0.098 −0.104
Veillonella46.60.533±1.594−0.413**−0.394**
Fusobacterium43.20.168±0.479−0.170 −0.117
Saccharimonadaceae uncultured bacterium22.70.003±0.006−0.185−0.180
Saccharimonadales uncultured bacterium uncultured bacterium5.70.001±0.0030.151 0.158
Rhodospirillales uncultured bacterium uncultured bacterium14.80.028±0.1510.1820.178
Bilophila78.40.083±0.1170.024 0.074
Desulfovibrio26.10.040±0.1050.302**0.295**
Desulfovibrionaceae uncultured bacterium13.60.005±0.0190.261*0.307**
Parasutterella48.90.124±0.347−0.171 −0.002
Sutterella67.00.104±0.178−0.135 −0.181
Burkholderiaceae unclassified genus5.70.003±0.0150.313**0.282**
Citrobacter9.10.009±0.0590.269*0.242*
Enterobacter10.20.031±0.163−0.021 −0.078
Escherichia-Shigella71.60.267±0.584−0.143 0.021
Raoultella5.70.006±0.048−0.069 −0.094
Haemophilus33.00.035±0.163−0.092 −0.123
Cloacibacillus17.00.019±0.1190.369**0.350**
Izimaplasmatales unclassified family unclassified genus6.80.003±0.0170.151 0.266*
Mollicutes RF39 uncultured bacterium uncultured bacterium9.10.006±0.0280.425**0.400**
Akkermansia56.82.211±4.2470.279**0.333**
Note. SD: standard deviation; OTUs: observed operational taxonomic units; PD: Faith’s phylogenetic diversity, ** p < 0.01; * p < 0.05; † p < 0.10.
Table 4. Interaction effects between environmental sensitivity and family Marinifilaceae predicting CRP (n = 88).
Table 4. Interaction effects between environmental sensitivity and family Marinifilaceae predicting CRP (n = 88).
Log-Normalized CRP
Step1 Step2
Predictorsβpβp
Age−0.151 −0.162
Sex−0.090 −0.109
BMI0.542**0.537**
HSP-J100.1660.162
Family Marinifilaceae0.015 0.032
HSP-J10 × Family Marinifilaceae −0.183*
R20.342**0.375**
ΔR2 0.033*
Note. ** p < 0.01; * p < 0.05; † p < 0.10. CRP: C-reactive protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 5. Interaction effects between environmental sensitivity and family Barnesiellaceae predicting LBP (n = 88).
Table 5. Interaction effects between environmental sensitivity and family Barnesiellaceae predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.041 0.059
Sex−0.035 −0.041
BMI0.507**0.443**
HSP-J100.140 0.122
Family Barnesiellaceae0.126 0.136
HSP-J10 × Family Barnesiellaceae −0.200*
R20.304**0.340**
ΔR2 0.036*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 6. Interaction effects between environmental sensitivity and family Akkermansiaceae predicting LBP (n = 88).
Table 6. Interaction effects between environmental sensitivity and family Akkermansiaceae predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.042 0.033
Sex−0.021 −0.031
BMI0.506**0.526**
HSP-J100.134 0.109
Family Akkermansiaceae0.028 0.058
HSP-J10 × Family Akkermansiaceae −0.192*
R20.290**0.325**
ΔR2 0.035*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 7. Interaction effects between environmental sensitivity and family Marinifilaceae predicting LBP (n = 88).
Table 7. Interaction effects between environmental sensitivity and family Marinifilaceae predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.034 0.023
Sex−0.001 −0.019
BMI0.504**0.499**
HSP-J100.129 0.126
Family Marinifilaceae−0.050 −0.034
HSP-J10 × Family Marinifilaceae −0.175
R20.291**0.321**
ΔR2 0.030
Note. ** p < 0.01; † p < 0.10. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 8. Interaction effects between environmental sensitivity and family Defluviitaleaceae predicting LBP (n = 88).
Table 8. Interaction effects between environmental sensitivity and family Defluviitaleaceae predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.041 0.038
Sex−0.035 −0.046
BMI0.533**0.538**
HSP-J100.143 0.119
Family Defluviitaleaceae0.101 0.095
HSP-J10 × Family Defluviitaleaceae −0.166
R20.298**0.324**
ΔR2 0.027
Note. ** p < 0.01; † p < 0.10. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 9. Interaction effects between environmental sensitivity and family Family XIII predicting LBP (n = 88).
Table 9. Interaction effects between environmental sensitivity and family Family XIII predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.043 0.015
Sex0.027 0.022
BMI0.501**0.516**
HSP-J100.142 0.127
Family Family XIII−0.114 −0.043
HSP-J10 × Family Family XIII −0.169
R20.300**0.323**
ΔR2 0.023
Note. ** p < 0.01; † p < 0.10. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 10. Interaction effects between environmental sensitivity and genus Butyricimonas predicting CRP (n = 88).
Table 10. Interaction effects between environmental sensitivity and genus Butyricimonas predicting CRP (n = 88).
Log-Normalized CRP
Step1 Step2
Predictorsβpβp
Age−0.152 −0.141
Sex−0.089 −0.106
BMI0.541**0.516**
HSP-J100.1650.206*
Genus Butyricimonas0.005 −0.035
HSP-J10 × Genus Butyricimonas −0.218*
R20.342**0.385**
ΔR2 0.044*
Note. ** p < 0.01; * p < 0.05; † p < 0.10. CRP: C-reactive protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 11. Interaction effects between environmental sensitivity and genus Coprobacter predicting LBP (n = 88).
Table 11. Interaction effects between environmental sensitivity and genus Coprobacter predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
VariablesβpΒp
Age0.041 −0.005
Sex−0.014 −0.018
BMI0.507**0.484**
HSP-J100.134 0.163
Genus Coprobacter0.019 −0.077
HSP-J10 × Genus Coprobacter −0.233*
R20.289**0.331**
ΔR2 0.042*
Note. ** p < 0.01; * p < 0.05; † p < 0.10. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 12. Interaction effects between environmental sensitivity and genus Barnesiella predicting LBP (n = 88).
Table 12. Interaction effects between environmental sensitivity and genus Barnesiella predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.037 0.063
Sex−0.030 −0.030
BMI0.511**0.456**
HSP-J100.138 0.112
Genus Barnesiella0.130 0.147
HSP-J10 × Genus Barnesiella −0.175
R20.305**0.332**
ΔR2 0.027
Note. ** p < 0.01; † p < 0.10. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 13. Interaction effects between environmental sensitivity and genus Akkermansia predicting LBP (n = 88).
Table 13. Interaction effects between environmental sensitivity and genus Akkermansia predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.042 0.033
Sex−0.021 −0.031
BMI0.506**0.526**
HSP-J100.134 0.109
Genus Akkermansia0.028 0.058
HSP-J10 × Genus Akkermansia −0.192*
R20.290**0.325**
ΔR2 0.035*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 14. Interaction effects between environmental sensitivity and genus Family XIII AD3011 group predicting LBP (n = 88).
Table 14. Interaction effects between environmental sensitivity and genus Family XIII AD3011 group predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.045 −0.014
Sex0.015 0.020
BMI0.493**0.556**
HSP-J100.148 0.134
Genus Family XIII AD3011 group−0.102 0.065
HSP-J10 × Genus Family XIII AD3011 group −0.284*
R20.298**0.351**
ΔR2 0.053*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 15. Interaction effects between environmental sensitivity and genus GCA-900066225 predicting LBP (n = 88).
Table 15. Interaction effects between environmental sensitivity and genus GCA-900066225 predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.031 0.001
Sex0.004 −0.025
BMI0.500**0.521**
HSP-J100.148 0.091
Genus GCA-900066225−0.121 −0.050
HSP-J10 × Genus GCA-900066225 −0.228*
R20.303**0.346**
ΔR2 0.043*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
Table 16. Interaction effects between environmental sensitivity and genus Ruminiclostridium 1 predicting LBP (n = 88).
Table 16. Interaction effects between environmental sensitivity and genus Ruminiclostridium 1 predicting LBP (n = 88).
Log-Normalized LBP
Step1 Step2
Predictorsβpβp
Age0.039 0.047
Sex−0.012 −0.037
BMI0.511**0.508**
HSP-J100.134 0.115
Genus Ruminiclostridium 10.016 −0.068
HSP-J10 × Genus Ruminiclostridium 1 −0.208*
R20.289**0.324**
ΔR2 0.035*
Note. ** p < 0.01; * p < 0.05. LBP: lipopolysaccharide-binding protein; BMI: body mass index; HSP-J10: environmental sensitivity.
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Takasugi, S.; Iimura, S.; Yasuda, M.; Saito, Y.; Morifuji, M. Key Taxa of the Gut Microbiome Associated with the Relationship Between Environmental Sensitivity and Inflammation-Related Biomarkers. Microorganisms 2025, 13, 185. https://doi.org/10.3390/microorganisms13010185

AMA Style

Takasugi S, Iimura S, Yasuda M, Saito Y, Morifuji M. Key Taxa of the Gut Microbiome Associated with the Relationship Between Environmental Sensitivity and Inflammation-Related Biomarkers. Microorganisms. 2025; 13(1):185. https://doi.org/10.3390/microorganisms13010185

Chicago/Turabian Style

Takasugi, Satoshi, Shuhei Iimura, Miyabi Yasuda, Yoshie Saito, and Masashi Morifuji. 2025. "Key Taxa of the Gut Microbiome Associated with the Relationship Between Environmental Sensitivity and Inflammation-Related Biomarkers" Microorganisms 13, no. 1: 185. https://doi.org/10.3390/microorganisms13010185

APA Style

Takasugi, S., Iimura, S., Yasuda, M., Saito, Y., & Morifuji, M. (2025). Key Taxa of the Gut Microbiome Associated with the Relationship Between Environmental Sensitivity and Inflammation-Related Biomarkers. Microorganisms, 13(1), 185. https://doi.org/10.3390/microorganisms13010185

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