Identification Mycobacterium spp. in the Natural Water of Two Austrian Rivers
Abstract
:1. Introduction
2. Materials and Methods
2.1. Origin of the Water Samples
2.2. PCR Assay for the 16S rRNA and hsp65 Genes
3. Results
4. Discussion
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
Abbreviations
NTM | Nontuberculous mycobacteria |
eDNA | Environmental DNA |
IMS-PCR | Immunomagnetic separation polymerase chain reaction |
nPCR | Nested PCR |
BLAST | Basic Local Alignment Sequence Tool |
HEYM | Herrold’s egg yolk medium |
IMS-PCR | Immunomagnetic separation polymerase chain reaction |
PPE proteins | Proline-Proline-Glutamic Acid proteins |
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River Sites | Sampling | Number of Positive/Prevalence Rate of Mycobacterium sp. | |
---|---|---|---|
Date | Number | ||
Kamp | June 2018 | 25 | 25/25 (100%) |
January 2019 | 20 | 20/20 (100%) | |
Wulka | July 2018 | 10 | 10/10 (100%) |
January 2019 | 15 | 11/15 (73.33%) | |
Totals | Total for 2018 | 35 | 35/35 (100%) |
Total for 2019 | 35 | 31/35 (88.57%) | |
Both years | 70 | 66/70 (94.28%) |
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Delghandi, M.R.; Waldner, K.; El-Matbouli, M.; Menanteau-Ledouble, S. Identification Mycobacterium spp. in the Natural Water of Two Austrian Rivers. Microorganisms 2020, 8, 1305. https://doi.org/10.3390/microorganisms8091305
Delghandi MR, Waldner K, El-Matbouli M, Menanteau-Ledouble S. Identification Mycobacterium spp. in the Natural Water of Two Austrian Rivers. Microorganisms. 2020; 8(9):1305. https://doi.org/10.3390/microorganisms8091305
Chicago/Turabian StyleDelghandi, Mohammad Reza, Karoline Waldner, Mansour El-Matbouli, and Simon Menanteau-Ledouble. 2020. "Identification Mycobacterium spp. in the Natural Water of Two Austrian Rivers" Microorganisms 8, no. 9: 1305. https://doi.org/10.3390/microorganisms8091305
APA StyleDelghandi, M. R., Waldner, K., El-Matbouli, M., & Menanteau-Ledouble, S. (2020). Identification Mycobacterium spp. in the Natural Water of Two Austrian Rivers. Microorganisms, 8(9), 1305. https://doi.org/10.3390/microorganisms8091305