Investigating the Spread of Antimicrobial Drug-Resistant Microorganisms in Dairy Sheep Farms: A Follow-Up Study
Abstract
:1. Introduction
2. Materials and Methods
3. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
- Food and Agriculture Organization. Drivers, Dynamics and Epidemiology of Antimicrobial Resistance in Animal Production. 2016. Available online: http://www.fao.org/3/i6209e/i6209e.pdf (accessed on 23 March 2023).
- Tzimotoudis, N.; Mataragka, A.; Mavrommatis, A.; Malesios, C.; Anastasiadi, V.; Galanis, D.; Timofte, D.; Zendri, F.; de Carvalho Ferreira, H.C.; Wauters, E.; et al. Antimicrobial Drug Resistance in Sheep Farms in Greece: Assessment of the Current Situation and Investigation Towards Improving Surveillance and Control. Acta Sci. Vet. Sci. 2022, 4, 173–186. [Google Scholar] [CrossRef]
- Ma, F.; Xu, S.; Tang, Z.; Li, Z.; Zhang, L. Use of antimicrobials in food animals and impact of transmission of antimicrobial resistance on humans. Biosaf. Health 2021, 3, 32–38. [Google Scholar] [CrossRef]
- The European Committee on Antimicrobial Susceptibility Testing. Breakpoint Tables for Interpretation of MICs and Zone Diameters. Version 13.0. 2023. Available online: http://www.eucast.org (accessed on 10 May 2023).
- Magiorakos, A.P.; Srinivasan, A.; Carey, R.B.; Carmeli, Y.; Falagas, M.E.; Giske, C.G.; Harbarth, S.; Hindler, J.F.; Kahlmeter, G.; Olsson-Liljequist, B.; et al. Multidrug resistant, extensively drug-resistant and pandrug-resistant bacteria: An international expert proposal for interim standard definitions for acquired resistance. Clin. Microbiol. Infect. 2012, 18, 268–281. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Bremer, P.J.; Fillery, S.; McQuillan, A.J. Laboratory scale Clean-In-Place (CIP) studies on the effectiveness of different caustic and acid wash steps on the removal of dairy biofilms. Int. J. Food Microbiol. 2006, 106, 254–262. [Google Scholar] [CrossRef] [PubMed]
- Jahid, I.K.; Ha, S.D. The Paradox of Mixed-Species Biofilms in the Context of Food Safety. Compr. Rev. Food Sci. Food Saf. 2014, 13, 990–1011. [Google Scholar] [CrossRef]
- Weber, M.; Liedtke, J.; Plattes, S.; Lipski, A. Bacterial community composition of biofilms in milking machines of two dairy farms assessed by a combination of culture-dependent and -independent methods. PLoS ONE 2019, 14, e0222238. [Google Scholar] [CrossRef] [PubMed]
- CLSI. Performance Standards for Antimicrobial Susceptibility Testing, 30th ed.; CLSI Supplement M100; Clinical and Laboratory Standards Institute: Wayne, PA, USA, 2020. [Google Scholar]
- Naccache, S.N.; Callan, K.; Burnham, C.A.; Wallace, M.A.; Westblade, L.F.; Dien Bard, J. Evaluation of Oxacillin and Cefoxitin Disk Diffusion and Microbroth Dilution Methods for Detecting mecA-Mediated β-Lactam Resistance in Contemporary Staphylococcus epidermidis Isolates. J. Clin. Microbiol. 2019, 57, e00961-19. [Google Scholar] [CrossRef] [PubMed] [Green Version]
Type of Sample | Farm A | Farm B | Farm C | Farm D | Farm E | Total | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T | St | Ec | B | T | St | Ec | B | T | St | Ec | B | T | St | Ec | B | T | St | Ec | B | T | St | Ec | B | Sum Positive | |
Milk tank | 1 | 1 | - | - | 1 | 1 * | - | - | 1 | 1 * | - | - | 1 | 1 * | - | - | 1 | 1 | - | - | 5 | 2 + 3 * | - | - | 5 |
Outer shell 1 | 8 | 7 | 1 | 1 | - | - | - | - | 8 | 5 | - | - | 8 | 2 + 4 * | 1 | 1 | 8 | 5 | - | - | 32 | 19 + 4 * | 2 | 2 | 25 |
Inner shell 1 | 4 | 4 | 1 | 1 | - | - | - | - | 4 | 3 * | - | - | 4 | 2 + 1 * | - | - | 4 | 1 | - | - | 16 | 7 + 4 * | 1 | 1 | 12 |
Concentrated feed | 1 | - | - | - | 1 | - | - | - | 2 | - | 2 | - | 1 | - | 1 | - | 1 | - | 1 | - | 6 | - | 4 | - | 4 |
Maize | 1 | - | - | - | 1 | - | - | - | 1 | - | - | - | 1 | - | 1 | - | 1 | - | 1 | - | 5 | - | 2 | - | 2 |
Rapeseed | 1 | 1 | - | - | - | - | - | - | 1 | - | - | - | - | - | - | - | 1 | - | - | - | 3 | 1 | - | - | 1 |
Soybean meal | 1 | - | - | - | - | - | - | - | 1 | - | 1 | - | - | - | - | - | 1 | - | - | - | 3 | - | 1 | - | 1 |
Sunflower seed cake | - | - | - | - | - | - | - | - | 1 | - | - | - | - | - | - | - | - | - | - | - | 1 | - | - | - | - |
Cottonseed cake | - | - | - | - | - | - | - | - | 1 | - | 1 | - | - | - | - | - | - | - | - | - | 1 | - | 1 | - | 1 |
Wheat bran | - | - | - | - | - | - | - | - | 1 | - | 1 | - | - | - | - | - | 1 | - | - | - | 2 | - | 1 | - | 1 |
Alfalfa hay pellet | - | - | - | - | - | - | - | - | - | - | - | - | 2 | - | 2 | - | - | - | - | - | 2 | - | 2 | - | 2 |
Total | 17 | 13 76.5% | 2 11.8% | 2 11.8% | 3 | 1 33.3% | 0 | 0 | 21 | 9 42.8% | 5 23.8% | 0 | 17 | 10 58.3% | 5 29.5% | 1 5.9% | 18 | 7 38.3% | 2 11.1% | 0 | 76 | 29 + 11 * 52.6% | 14 18.4% | 3 3.9% | 54 71.1% |
Farm | Positive Samples per Type | Antibiotic 2 | MDR | |||||||
---|---|---|---|---|---|---|---|---|---|---|
P | FOX | ERY | DA | SXT | NOR | CN | TE | |||
A | Milk tank | |||||||||
Outer shell 1 1 | ||||||||||
Outer shell 2 | ||||||||||
Outer shell 3 | + | + | + | + | ||||||
Outer shell 4 | ||||||||||
Outer shell 5 | ||||||||||
Outer shell 7 | ||||||||||
Outer shell 8 | ||||||||||
Inner 1 shell 1 | ||||||||||
Inner shell 2 | ||||||||||
Inner shell 3 | ||||||||||
Inner shell 4 | ||||||||||
Rapeseed | ||||||||||
Total Farm A | 0 of 13 | 1 of 13 | 0 of 13 | 0 of 13 | 0 of 13 | 0 of 13 | 1 of 13 | 1 of 13 | 1 of 13 | |
B | Milk tank * | |||||||||
Total Farm B | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | 0 of 1 | |
C | Milk tank * | + | ||||||||
Outer shell 1 | + | |||||||||
Outer shell 2 | + | |||||||||
Outer shell 5 | ||||||||||
Outer shell 6 | ||||||||||
Outer shell 8 | ||||||||||
Inner shell 1 * | ||||||||||
Inner shell 2 * | ||||||||||
Inner shell 3 * | + | + | + | + | ||||||
Total Farm C | 2 of 9 | 0 of 9 | 1 of 9 | 1 of 9 | 0 of 9 | 0 of 9 | 0 of 9 | 2 of 9 | 1 of 9 | |
D | Milk tank * | |||||||||
Outer shell 1 | + | + | + | + | ||||||
Outer shell 2 * | + | |||||||||
Outer shell 3 * | ||||||||||
Outer shell 4 * | ||||||||||
Outer shell 5 | + | + | + | + | ||||||
Outer shell 7 * | ||||||||||
Inner shell 1 | + | + | + | + | ||||||
Inner shell 2 | + | + | + | + | ||||||
Inner shell 4 * | + | |||||||||
Total Farm D | 0 of 10 | 0 of 10 | 3 of 10 | 4 of 10 | 0 of 10 | 0 of 10 | 1 of 10 | 6 of 10 | 4 of 10 | |
E | Milk tank | |||||||||
Outer shell 1 | ||||||||||
Outer shell 3 | ||||||||||
Outer shell 5 | + | |||||||||
Outer shell 6 | ||||||||||
Outer shell 7 | ||||||||||
Inner shell 4 | ||||||||||
Total Farm E | 0 of 7 | 0 of 7 | 1 of 7 | 0 of 7 | 0 of 7 | 0 of 7 | 0 of 7 | 0 of 7 | 0 of 7 | |
Total | 2 of 40 5% | 1 of 40 2.5% | 5 of 40 12.5% | 5 of 40 12.5% | 0 of 40 0% | 0 of 40 0% | 2 of 40 5% | 9 of 40 22.5% | 6 of 40 15% |
Farm | Positive Samples per Type | Antibiotic 2 | MDR | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
SXT | CN | CIP | AM | AMC | FOX | CAZ | MEM | CTX | |||
A | Outer shell 1 3 | + | |||||||||
Inner shell 1 | + | ||||||||||
Total Farm A | 0 of 2 | 1 of 2 | 0 of 2 | 0 of 2 | 1 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | |
C | Concentrated Feed 1 | ||||||||||
Concentrated Feed 2 | |||||||||||
Cottonseed cake | |||||||||||
Soybean meal | |||||||||||
Wheat bran | |||||||||||
Total Farm C | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | |
D | Outer shell 3 | ||||||||||
Concentrated Feed | |||||||||||
Maize | |||||||||||
Alfalfa hay pellet 1 | |||||||||||
Alfalfa hay pellet 2 | |||||||||||
Total Farm D | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | 0 of 5 | |
E | Concentrated Feed | + | |||||||||
Maize | |||||||||||
Total Farm E | 1 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | 0 of 2 | |
Total | 1 of 14 7.1% | 1 of 14 7.1% | 0 of 14 0% | 0 of 14 0% | 1 of 14 7.1% | 0 of 14 0% | 0 of 14 0% | 0 of 14 0% | 0 of 14 0% | 0 of 14 0% |
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Mataragka, A.; Tzimotoudis, N.; Mavrommatis, A.; Tsiplakou, E.; Symeonidou, A.; Kotsikori, M.; Zervas, G.; Ikonomopoulos, J. Investigating the Spread of Antimicrobial Drug-Resistant Microorganisms in Dairy Sheep Farms: A Follow-Up Study. Appl. Sci. 2023, 13, 8165. https://doi.org/10.3390/app13148165
Mataragka A, Tzimotoudis N, Mavrommatis A, Tsiplakou E, Symeonidou A, Kotsikori M, Zervas G, Ikonomopoulos J. Investigating the Spread of Antimicrobial Drug-Resistant Microorganisms in Dairy Sheep Farms: A Follow-Up Study. Applied Sciences. 2023; 13(14):8165. https://doi.org/10.3390/app13148165
Chicago/Turabian StyleMataragka, Antonia, Nikolaos Tzimotoudis, Alexandros Mavrommatis, Eleni Tsiplakou, Andrianna Symeonidou, Maria Kotsikori, George Zervas, and John Ikonomopoulos. 2023. "Investigating the Spread of Antimicrobial Drug-Resistant Microorganisms in Dairy Sheep Farms: A Follow-Up Study" Applied Sciences 13, no. 14: 8165. https://doi.org/10.3390/app13148165
APA StyleMataragka, A., Tzimotoudis, N., Mavrommatis, A., Tsiplakou, E., Symeonidou, A., Kotsikori, M., Zervas, G., & Ikonomopoulos, J. (2023). Investigating the Spread of Antimicrobial Drug-Resistant Microorganisms in Dairy Sheep Farms: A Follow-Up Study. Applied Sciences, 13(14), 8165. https://doi.org/10.3390/app13148165