Convolutional Support Vector Models: Prediction of Coronavirus Disease Using Chest X-rays
Abstract
:1. Introduction
2. Convolutional Networks
2.1. Multi-Layer Perceptron Neural Networks
2.2. Convolution Neural Networks
3. Support Vector Machines
3.1. Support Vector Classifier
3.2. Kernel Transformation
3.3. Convolution Procedures and SVM
4. Simulation Study
Experimental Setup
- Accuracy (ACC): is the rate between correct predictions and total of predictions. It is sensitive to classes unbalancing.
- Sensitivity (SEN): known as recall, it is the rate of true positive predictions and all positive predictions.
- Specificity (SPC): it is the rate of true negative predictions and all negative predictions.
- Matthew’s correlation coefficient (MCC): this metric measures the correlation between true and predicted values. It may vary from −1 to 1 and the closer to 1 the correlation value is, the better is the predictions.
- F1 Score (F1): this metric is the harmonic mean of precision and recall. Precision indicates how many positive predictions are positive.
5. Real Data Study
5.1. Data and X-ray Image Acquisition
5.2. Predictive Models
6. Final Considerations
Author Contributions
Funding
Conflicts of Interest
References
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Kernel Type | Parameters | |
---|---|---|
Linear | ||
Polynomial | ||
Gaussian |
Class 1 | Class 2 | |||
---|---|---|---|---|
Difference | Channel | |||
R | 128 | 128 | 25 | |
1SD | G | 119 | 137 | 18 |
B | 128 | 128 | 30 | |
R | 128 | 128 | 25 | |
3SD | G | 101 | 155 | 18 |
B | 128 | 128 | 30 |
Samples | Method | ACC | SEN | SPC | MCC | F1 | Time |
---|---|---|---|---|---|---|---|
CSVM | 0.46 | 0.40 | 0.51 | −0.10 | 0.45 | 0.09 | |
CSVM | 0.45 | 0.41 | 0.49 | −0.10 | 0.44 | 0.09 | |
100 | CSVM | 0.45 | 0.41 | 0.49 | −0.10 | 0.45 | 0.09 |
CNN | 0.49 | 0.23 | 0.75 | −0.04 | 0.50 | 0.12 | |
CNN | 0.49 | 0.11 | 0.88 | −0.08 | 0.47 | 0.24 | |
CSVM | 0.52 | 0.50 | 0.54 | 0.05 | 0.50 | 0.10 | |
CSVM | 0.54 | 0.54 | 0.54 | 0.08 | 0.53 | 0.10 | |
300 | CSVM | 0.54 | 0.55 | 0.53 | 0.08 | 0.54 | 0.10 |
CNN | 0.51 | 0.48 | 0.55 | 0.03 | 0.49 | 0.20 | |
CNN | 0.50 | 0.08 | 0.91 | −0.07 | 0.40 | 0.53 | |
CSVM | 0.88 | 0.88 | 0.88 | 0.77 | 0.88 | 0.13 | |
CSVM | 0.88 | 0.87 | 0.88 | 0.76 | 0.88 | 0.12 | |
500 | CSVM | 0.87 | 0.86 | 0.88 | 0.74 | 0.87 | 0.12 |
CNN | 0.87 | 0.85 | 0.88 | 0.74 | 0.86 | 0.27 | |
CNN | 0.50 | 0.01 | 0.99 | 0.29 | 0.70 | 0.87 | |
CSVM | 0.98 | 0.98 | 0.98 | 0.97 | 0.98 | 0.24 | |
CSVM | 0.98 | 0.98 | 0.99 | 0.97 | 0.98 | 0.20 | |
1000 | CSVM | 0.98 | 0.98 | 0.98 | 0.97 | 0.98 | 0.22 |
CNN | 0.99 | 0.99 | 0.99 | 0.98 | 0.99 | 0.50 | |
CNN | 0.77 | 0.55 | 0.98 | 0.93 | 0.97 | 2.46 |
Samples | Method | ACC | SEN | SPC | MCC | F1 | Time |
---|---|---|---|---|---|---|---|
CSVM | 0.45 | 0.41 | 0.49 | −0.10 | 0.45 | 0.09 | |
CSVM | 0.44 | 0.43 | 0.45 | −0.13 | 0.45 | 0.10 | |
100 | CSVM | 0.44 | 0.42 | 0.46 | −0.12 | 0.45 | 0.10 |
CNN | 0.48 | 0.22 | 0.74 | −0.13 | 0.50 | 0.13 | |
CNN | 0.50 | 0.16 | 0.84 | −0.12 | 0.56 | 0.24 | |
CSVM | 0.51 | 0.54 | 0.47 | 0.02 | 0.52 | 0.10 | |
CSVM | 0.51 | 0.51 | 0.50 | 0.19 | 0.51 | 0.10 | |
300 | CSVM | 0.51 | 0.52 | 0.51 | 0.03 | 0.51 | 0.10 |
CNN | 0.51 | 0.48 | 0.53 | 0.02 | 0.48 | 0.21 | |
CNN | 0.49 | 0.17 | 0.82 | −0.02 | 0.38 | 0.54 | |
CSVM | 0.88 | 0.88 | 0.88 | 0.78 | 0.88 | 0.12 | |
CSVM | 0.89 | 0.89 | 0.89 | 0.79 | 0.89 | 0.11 | |
500 | CSVM | 0.90 | 0.89 | 0.90 | 0.80 | 0.90 | 0.11 |
CNN | 0.89 | 0.89 | 0.89 | 0.79 | 0.89 | 0.28 | |
CNN | 0.88 | 0.87 | 0.90 | 0.80 | 0.89 | 0.95 | |
CSVM | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.18 | |
CSVM | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.16 | |
1000 | CSVM | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.16 |
CNN | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.48 | |
CNN | 0.99 | 0.99 | 1.00 | 1.00 | 1.00 | 2.65 |
COVID-19 | Other Diseases | Healthy | Total | |
---|---|---|---|---|
Quantity | 217 | 108 | 112 | 437 |
Method | ACC | F1 | MCC | Time |
---|---|---|---|---|
MLP | 95.54 | 95.46 | 91.57 | 0.0422 |
MLP | 96.59 | 96.56 | 93.48 | 0.0370 |
CNN | 96.67 | 96.63 | 93.48 | 0.7792 |
CNN | 96.73 | 96.67 | 93.74 | 0.7585 |
SVM | 80.79 | 80.21 | 61.98 | 0.0074 |
SVM | 77.90 | 77.24 | 56.30 | 0.0076 |
SVM | 83.45 | 83.86 | 67.39 | 0.0067 |
CSVM | 98.00 | 97.97 | 96.11 | 0.0146 |
CSVM | 96.57 | 98.13 | 96.36 | 0.0143 |
CSVM | 98.14 | 96.59 | 93.34 | 0.0151 |
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Maia, M.; Pimentel, J.S.; Pereira, I.S.; Gondim, J.; Barreto, M.E.; Ara, A. Convolutional Support Vector Models: Prediction of Coronavirus Disease Using Chest X-rays. Information 2020, 11, 548. https://doi.org/10.3390/info11120548
Maia M, Pimentel JS, Pereira IS, Gondim J, Barreto ME, Ara A. Convolutional Support Vector Models: Prediction of Coronavirus Disease Using Chest X-rays. Information. 2020; 11(12):548. https://doi.org/10.3390/info11120548
Chicago/Turabian StyleMaia, Mateus, Jonatha S. Pimentel, Ivalbert S. Pereira, João Gondim, Marcos E. Barreto, and Anderson Ara. 2020. "Convolutional Support Vector Models: Prediction of Coronavirus Disease Using Chest X-rays" Information 11, no. 12: 548. https://doi.org/10.3390/info11120548
APA StyleMaia, M., Pimentel, J. S., Pereira, I. S., Gondim, J., Barreto, M. E., & Ara, A. (2020). Convolutional Support Vector Models: Prediction of Coronavirus Disease Using Chest X-rays. Information, 11(12), 548. https://doi.org/10.3390/info11120548