An Efficient Framework for Accurate Liver Segmentation in Abdominal CT Images with Low Knowledge Requirement
Abstract
:1. Introduction
2. Materials and Methods
2.1. Data
2.2. Methods
2.2.1. Preprocessing
2.2.2. Liver CT Image Segmentation
- Liver reconstruction algorithm
- 2.
- An edge refinement method
2.2.3. Morphological Post-Processing
3. Results
3.1. Evaluation Metrics
- (1)
- Volumetric overlap error (VOE)
- (2)
- Relative volume error (RVD)
- (3)
- Average symmetric surface distance (ASD)
- (4)
- Root-mean-square symmetric surface distance (RMSD)
- (5)
- Maximum symmetric surface distance (MSD)
- (6)
- Dice coefficient
3.2. Experiments and Results
4. Discussion
Comparison Experiments and Results
5. Conclusions
- Our method reduces manual operations and the prior knowledge that doctors need. In liver reconstruction methods, the cluster method based on spatial fuzzy c-means clustering is highly sensitive to the changes of gray and noise, and can alleviate the problem of weak boundary. After clustering, the seed points of region growth can be selected without too much prior knowledge. The seed points inside the liver area of the picture can be selected arbitrarily, which greatly avoids the problem that tumors and other lesions are wrongly selected as the seed points by the traditional methods, and reduces a lot of manual operations as well.
- Our method reduces the influence of external tissues and muscles and avoids undersegmentation or oversegmentation. Compared with directly thresholding the original image before reconstruction, thresholding after clustering can minimize the impact of external tissues and muscles on regional growth results and avoid the common undersegmentation or oversegmentation of reconstruction.
- Our method reduces time complexity and increases leak resistance and noise resistance. After clustering, the reconstruction results are closer to the liver boundary, which reduces the number of iterations of the level set and the time complexity of the algorithm. The result of liver reconstruction in this method is used as the initial segmentation region of edge refinement method, which reduces the risk that the reconstruction result is far away from the liver boundary region, avoids the situation that the segmentation result is not ideal due to the need to use too much balloon force, and makes use of the leak resistance and noise resistance of RD level set to make the result more accurate.
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
CT | Computed tomography |
SSC | Sparse shape composition |
SFCM | Spatial fuzzy c-means |
RD level set | Level set method combined with reaction diffusion equation |
CT | Computed tomography |
CAD | Computer-aided diagnosis |
CRO | Chemical reaction optimization |
VOE | Volumetric overlap error |
RVD | Relative volume error |
ASD | Average symmetric surface distance |
RMSD | Root-mean-square symmetric surface distance |
MSD | Maximum symmetric surface distance |
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Datasets | Pixel Spacing [mm] | Slice Thickness [mm] | Pixel Number |
---|---|---|---|
Sliver07 | 0.57, 0.81 | 0.7, 5.0 | 512 × 512 |
3Dircadb | 0.56, 0.81 | 1.0, 4.0 | 512 × 512 |
Local datasets | 0.60, 0.70 | —— | 512 × 512 |
Database | Methods | VOE [%] | RVD [%] | ASD [mm] | RMSD [mm] | MSD [mm] |
---|---|---|---|---|---|---|
3Dircadb | Ahmad et al. [25] | 13.0 ± 5.0 | −5.7 ± 5.6 | 2.2 ± 1.1 | - | 25.7 ± 8.9 |
Lu et al. [26] | 9.4 ± 3.3 | 1.0 ± 3.3 | 1.9 ± 1.1 | 4.2 ± 3.2 | 33.1 ± 16.4 | |
Li et al. [23] | 9.1 ± 1.4 | −0.1 ± 3.6 | 1.6 ± 0.4 | 3.2 ± 1.0 | 28.2 ± 8.3 | |
Ours | 8.1 ± 3.0 | −0.2 ± 4.5 | 1.5 ± 0.8 | 2.4 ± 0.8 | 20.8 ± 8.4 | |
Sliver07 | Lu et al. [24] | 7.4 ± 1.9 | 4.6 ± 2.8 | 1.2 ± 0.4 | 2.8 ± 1.3 | 38.5 ± 18.0 |
Yang et al. [10] | 8.9 ± 2.2 | 2.3 ± 2.0 | 1.4 ± 0.3 | 2.4 ± 1.2 | 24.3 ± 9.6 | |
Sakboonyara et al. [27] | 5.1 ± 0.9 | 0.2 ± 1.3 | 1.1 ± 0.4 | 3.3 ± 1.6 | 49.4 ± 26.9 | |
Li et al. [17] | 5.1 ± 1.6 | 0.1 ± 2.9 | 0.9 ± 0.3 | 1.8 ± 0.6 | 19.4 ± 6.7 | |
Ours | 5.1 ± 1.5 | −0.1 ± 1.6 | 1.0 ± 0.4 | 2.0 ± 0.4 | 18.2 ± 13.4 |
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Yu, S.-Q.; Zhou, T.; Wen, Y.-H.; Li, C. An Efficient Framework for Accurate Liver Segmentation in Abdominal CT Images with Low Knowledge Requirement. Electronics 2022, 11, 4182. https://doi.org/10.3390/electronics11244182
Yu S-Q, Zhou T, Wen Y-H, Li C. An Efficient Framework for Accurate Liver Segmentation in Abdominal CT Images with Low Knowledge Requirement. Electronics. 2022; 11(24):4182. https://doi.org/10.3390/electronics11244182
Chicago/Turabian StyleYu, Shao-Qian, Tao Zhou, Yan-Hua Wen, and Chuang Li. 2022. "An Efficient Framework for Accurate Liver Segmentation in Abdominal CT Images with Low Knowledge Requirement" Electronics 11, no. 24: 4182. https://doi.org/10.3390/electronics11244182
APA StyleYu, S. -Q., Zhou, T., Wen, Y. -H., & Li, C. (2022). An Efficient Framework for Accurate Liver Segmentation in Abdominal CT Images with Low Knowledge Requirement. Electronics, 11(24), 4182. https://doi.org/10.3390/electronics11244182