The CM SAF R Toolbox—A Tool for the Easy Usage of Satellite-Based Climate Data in NetCDF Format
Abstract
:1. Introduction
2. The CM SAF R Toolbox
- Data preparation
- Analysis of climate data
- Visualization of data and results.
2.1. Data Preparation
2.2. Data Analysis
The cmsaf R-Package
2.3. Data Visualization
2.4. CM SAF R Toolbox Interface
3. Example Application for Sunshine Duration
3.1. CM SAF Sunshine Duration Data
3.2. SDU Data Preparation
3.3. Sunshine Duration Analysis for Europe 2018
3.4. Summary of SDU Analysis
4. Conclusions and Outlook
Author Contributions
Acknowledgments
Conflicts of Interest
References
- Bojinski, S.; Verstraete, M.; Peterson, T.C.; Richter, C.; Simmons, A.; Zemp, M. The Concept of Essential Climate Variables in Support of Climate Research, Applications, and Policy. Bull. Am. Meteorol. Soc. 2014, 95, 1431–1443. [Google Scholar] [CrossRef] [Green Version]
- NOAA CDR Program. Available online: https://www.ncdc.noaa.gov/cdr (accessed on 14 February 2019).
- Program for Climate Model Diagnosis & Intercomparison. Available online: https://pcmdi.llnl.gov/index.html (accessed on 14 February 2019).
- ESA Climate Change Initiative. Available online: http://cci.esa.int/ (accessed on 14 February 2019).
- Rew, R.K.; Davis, G.P.; Emmerson, S.; Davies, H. NetCDF User’s Guide for C, An Interface for Data Access, Version 4. 2011. Available online: https://www.unidata.ucar.edu/software/netcdf//old_docs/docs_4_1_2/ (accessed on 31 January 2019).
- Climate Data Operators. Available online: https://code.mpimet.mpg.de/projects/cdo (accessed on 31 January 2019).
- NetCDF Operators. Available online: http://nco.sourceforge.net (accessed on 31 January 2019).
- Panoply. Available online: https://www.giss.nasa.gov/tools/panoply/ (accessed on 31 January 2019).
- Ncview: A netCDF Visual Browser. Available online: http://meteora.ucsd.edu/~pierce/ncview_home_page.html (accessed on 31 January 2019).
- Hornik, K. The R FAQ. 2018. Available online: https://CRAN.R-project.org/doc/FAQ/R-FAQ.html (accessed on 31 January 2019).
- CRAN Packages. Available online: https://cran.r-project.org/web/packages/ (accessed on 31 January 2019).
- CM SAF Tools. Available online: https://www.cmsaf.eu/tools (accessed on 31 January 2019).
- The R Project for Statistical Computing. Available online: https://www.r-project.org/ (accessed on 31 January 2019).
- RStudio. Available online: https://www.rstudio.com/ (accessed on 31 January 2019).
- The cmsaf R-Package. Available online: https://CRAN.R-project.org/package=cmsaf (accessed on 31 January 2019).
- Wickham, H. R Packages: Organize, Test, Document, and Share Your Code; O’Reilly Media: Sebastopol, CA, USA, 2015; ISBN 978-1491910597. [Google Scholar]
- CF Conventions and Metadata. Available online: http://cfconventions.org/ (accessed on 31 January 2019).
- Shiny. Available online: https://shiny.rstudio.com/ (accessed on 31 January 2019).
- WMO. July Sees Extreme Weather with High Impacts. 2018. Available online: https://public.wmo.int/en/media/news/july-sees-extreme-weather-high-impacts (accessed on 31 January 2019).
- Pfeifroth, U.; Kothe, S.; Müller, R.; Trentmann, J.; Hollmann, R.; Fuchs, P.; Werscheck, M. Surface Radiation Data Set—Heliosat (SARAH)—Edition 2; Satellite Application Facility on Climate Monitoring: Offenbach, Germany, 2017. [Google Scholar] [CrossRef]
- Kothe, S.; Pfeifroth, U.; Cremer, R.; Trentmann, J.; Hollmann, R. A Satellite-Based Sunshine Duration Climate Data Record for Europe and Africa. Remote Sens. 2017, 9, 429. [Google Scholar] [CrossRef]
- Yang, W.; John, V.O.; Zhao, X.; Lu, H.; Knapp, K.R. Satellite Climate Data Records: Development, Applications, and Societal Benefits. Remote Sens. 2016, 8, 331. [Google Scholar] [CrossRef]
- Pfeifroth, U.; Trentmann, J.; Hollmann, R.; Selbach, N.; Werscheck, M.; Meirink, J.F. ICDR SEVIRI Radiation-Based on SARAH-2 Methods; Satellite Application Facility on Climate Monitoring: Offenbach, Germany, 2018; Available online: https://wui.cmsaf.eu/safira/action/viewICDRDetails?acronym=SARAH_V002_ICDR (accessed on 31 January 2019).
- Dowell, M.; Lecomte, P.; Husband, R.; Schulz, J.; Mohr, T.; Tahara, Y.; Eckman, R.; Lindstrom, E.; Wooldridge, C.; Hilding, S.; et al. Strategy Towards an Architecture for Climate Monitoring from Space. WMO, 2013. Available online: http://www.wmo.int/pages/prog/sat/documents/ARCH_strategy-climate-architecture-space.pdf (accessed on 31 January 2019).
- Fink, A.H.; Brücher, T.; Krüger, A.; Leckebusch, G.C.; Pinto, J.G.; Ulbrich, U. The 2003 European summer heatwaves and drought–synoptic diagnosis and impacts. Weather 2004, 59, 209–216. [Google Scholar] [CrossRef]
Operator | Description | Operator | Description |
---|---|---|---|
cmsaf.add | Add fields of two files. | seasmean | Seasonal means. |
cmsaf.addc | Add constant to data. | seassum | Seasonal sums. |
cmsaf.div | Divide fields of two files. | timmax | All-time maxima. |
cmsaf.divc | Divide data by constant. | timmean | Mean of time series. |
cmsaf.mul | Multiply fields of two files. | timmin | All-time minima. |
cmsaf.mulc | Multiply data with constant. | timpctl | Percentile over all time steps. |
cmsaf.sub | Subtract fields of two files. | timsd | All-time standard deviations. |
cmsaf.subc | Subtract constant from data. | timsum | Sum of time series. |
dayrange | Diurnal range. | trend | Linear trends. |
divdpm | Divide by days per month. | wfldmean | Weighted spatial mean. |
fldmax | Field maximum. | ydaymean | Multi-year daily means. |
fldmean | Field mean. | year.anomaly | Annual anomalies. |
fldmin | Field minimum. | yearmean | Annual means |
mon.anomaly | Monthly anomalies. | yearsum | Annual sums. |
monmax | Monthly maxima. | ymonmax | Multi-year monthly maxima. |
monmean | Monthly means. | ymonmean | Multi-year monthly means. |
monmin | Monthly minima. | ymonmin | Multi-year monthly minima. |
monsd | Monthly standard deviation. | ymonsd | Multi-year monthly standard deviations. |
monsum | Monthly sums. | ymonsum | Multi-year monthly sums. |
muldpm | Multiply by days per month. | yseasmax | Multi-year seasonal maxima. |
multimonmean | Multi-monthly means. | yseasmean | Multi-year seasonal means. |
multimonsum | Multi-monthly sums. | yseasmin | Multi-year seasonal minima. |
seas.anomaly | Seasonal anomalies. | yseassd | Multi-year seasonal standard deviations. |
Operator | Description | Operator | Description |
---|---|---|---|
box_mergetime | Combine files and simultaneously cut a region. | remapbil | Bilinear grid interpolation. |
change_att | Change attributes of variable. | sellonlatbox | Select region by longitude/latitude. |
extract.level | Extract levels from four-dimensional variables. | selmon | Extract list of months. |
extract.period | Remove time period. | selperiod | Extract list of dates. |
get_time | Convert time steps to POSIXct. | selpoint | Extract data at given point. |
levbox_mergetime | Combine files and simultaneously cut a region and level. | selpoint.multi | Extract data at multiple points. |
ncinfo | Get information about file content. | seltime | Extract specific time step. |
read_ncvar | Read variable. | selyear | Extract list of years. |
© 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
Share and Cite
Kothe, S.; Hollmann, R.; Pfeifroth, U.; Träger-Chatterjee, C.; Trentmann, J. The CM SAF R Toolbox—A Tool for the Easy Usage of Satellite-Based Climate Data in NetCDF Format. ISPRS Int. J. Geo-Inf. 2019, 8, 109. https://doi.org/10.3390/ijgi8030109
Kothe S, Hollmann R, Pfeifroth U, Träger-Chatterjee C, Trentmann J. The CM SAF R Toolbox—A Tool for the Easy Usage of Satellite-Based Climate Data in NetCDF Format. ISPRS International Journal of Geo-Information. 2019; 8(3):109. https://doi.org/10.3390/ijgi8030109
Chicago/Turabian StyleKothe, Steffen, Rainer Hollmann, Uwe Pfeifroth, Christine Träger-Chatterjee, and Jörg Trentmann. 2019. "The CM SAF R Toolbox—A Tool for the Easy Usage of Satellite-Based Climate Data in NetCDF Format" ISPRS International Journal of Geo-Information 8, no. 3: 109. https://doi.org/10.3390/ijgi8030109
APA StyleKothe, S., Hollmann, R., Pfeifroth, U., Träger-Chatterjee, C., & Trentmann, J. (2019). The CM SAF R Toolbox—A Tool for the Easy Usage of Satellite-Based Climate Data in NetCDF Format. ISPRS International Journal of Geo-Information, 8(3), 109. https://doi.org/10.3390/ijgi8030109