1. Introduction
Bacterial endotoxins are the most common and dangerous contaminants found in the finished pharmaceutical preparations and medical devices, which is why Pharmacopoeias strictly regulate its content limits.
The outer membrane of Gram-negative bacteria contains a series of bacterial endotoxins known as Lipopolysaccharides (LPS); each cell can contain over two million copies [
1]. Their function is to screen off damaging compounds, while letting nutrients pass. Their release into the surrounding medium mainly happens during cell growth and division as well as during cell death.
These large molecules consist of a hydrophobic domain (lipid A), oligosaccharide core, and a polysaccharide domain known as O-antigen that is responsible for their toxic effect due to the strong immune responses induced in humans and animals. Endotoxins may be introduced into the bloodstream through contaminated intravenous devices or medications. The release of such pyrogenic compounds may lead to a rapid inflammation reaction resulting in fever, inflammation, endotoxemia, and septic shock followed in some cases by organ failure and eventual death [
2]. Actually, different bacterial species produce different types of LPS being able to evoke stronger or weaker human blood responses [
3]. The amount of LPS present depends on the amount and identity of the bacteria or on the treatment the bacteria have undergone during production. For E. coli, an amount between 2 and 50 femtograms of LPS has been experimentally determined [
4].
As they are resistant to conventional sterilization procedures, the endotoxins test constitutes one of the main tests in the quality control for the production of drugs, in the production process of sterile products, medical devices, and pharmaceutical products that have to be injected or implanted into the body. A lethal dose of intravenously injected LPS can be as low as 1 to 2 micrograms [
5].
According to the European Pharmacopoeia [
6], the limit of endotoxins being tolerated in parenterally administered substances is 5 endotoxin units (EU) per kg body mass (1 EU ≈ 100 pM) [
7]. This specification leads to a maximum tolerable endotoxin amount of 350 EU per individual (based on a body mass of 70 kg) or a tolerance of 350 EU/mL for a parenteral product where a single dose would comprise 1 mL.
There are two main methods for endotoxin detection: the in vitro pyrogen test (IPT) and the test Limulus amebocyte lysate (LAL) [
2]. The first method, the in vitro pyrogen test (IPT), as described in European Pharmacopoeia and United States Pharmacopeia (USP) [
8], is based on the incubation of blood leukocytes with LPS that is a very potent inducer of endogenous pyrogen production. Then, after intravenous injection of the incubation supernatant, the induced fever curve in rabbits is monitored. Although still approved, it is now rarely used, owing to costs, being time consuming, and the absence of quantitative results, having been largely replaced by the LAL test. This second method is based on the endotoxin-stimulated coagulation of the amebocyte lysate obtained from horseshoe crabs [
9]. Due to high sensitivity, it is today the standard method selected by the US, European, and Japanese Pharmacopoeias for endotoxin testing for parenteral drugs and medical devices (detection limit reported around 10
−9 g/mL [
10]). Despite their high sensitivity, they involve animals and are laborious, time consuming, and expensive. Yet, in LAL, as with most enzymatic tests, results are susceptible to changes in temperature and pH and to the presence of protease and/or impurities when applied to actual cell lysates. Moreover, although they have a high sensitivity in the pharmacy industry, there are limitations in demonstrating circulating LPS [
11].
This present scenario demands novel techniques with new approaches for endotoxin detection. Demand for developing faster, accurate, and portable quality test platforms that do not require complicated and expensive assay steps is significantly challenging [
12,
13,
14,
15,
16,
17]. Such detection strategies can be combined with different bioreceptors, ranging from antibodies or transmembrane receptors [
18] to aptamers [
7,
19] and peptides [
12], from enzymes that have a high affinity for LPS to molecularly imprinted polymers [
17,
20]. Optical biosensors, uniquely when integrated with nanotechnology, can offer a qualified response for addressing these analytical needs, owing to the possibility of real-time analysis, label-free detection, and the small sample volume required. Among optical biosensors, localized surface plasmon resonance (LSPR)-based technologies are a powerful tool for high-sensitivity and label-free detection in a compact device setting. These optical transducers can easily be integrated inside miniaturized lab-on-chip (LOC) devices with a range of fluidic systems for analyte delivery, making them prominent routes for the realization of a portable sensor for an on-site diagnostic test or point-of-care devices [
21].
In this work, we propose a sensitive biosensing approach exploiting optical and physicochemical properties of plasmonic nanostructures: their ability to concentrate light energy in nanoscale volumes, and subsequently, the increased near field intensity by several orders of magnitude with respect to incident light makes them a valuable transducing platform for endotoxin detection. In such nanostructures, a pivotal role in the sensing functionalities performance is played by electromagnetic field enhancement at the nanoscale, allowing probing interaction of biomolecules at the sensor surface. This is why they are ideal transducers for probing localized changes in a medium that allows a label-free method for detecting molecular interaction.
Developing techniques for tailoring the size and shape of the metal nanoparticles (NPs) and patterning them on a planar substrate in controlled spacing assemblies is a widely explored research ambit producing exciting results. Sensing functionalities are strictly related to the intensity and distribution of the probe electromagnetic fields; a proper choice of the sensing transducer geometry is a crucial point in the achievement of performant biosensor assay.
Different nanolithographies using colloidal particles as masks for etching or templates for the metal deposition are emerging as unconventional methods for the nano-fabrication of plasmonic structures on planar substrates. Varying the sizes and the arrangement of the colloids can systematically tune the dimensions, periodicity, and interspacing of the metal nanostructures and their corresponding plasmon resonances. The advantages of these techniques are mainly the versatility, low cost, and compatibility with wafer-scale processes as well as their potential to manufacture a broad selection of nanostructured materials.
Pioneering work by Van Duyne and co-workers reported the realization of a close-packed array (CPA) of polystyrene (PS) nanospheres self-assembled on a surface and characterized by a two-dimensional crystal-like structure with hexagonal geometry [
22]. Planar distributions of long-range ordered array metal nano-prisms with tailored optical functionalities can be realized by depositing thin metals layers through the small apertures of the CPA.
An even easier method allows the self-assembly of electrostatically-driven charged colloids onto planar substrates, thus producing, with the same principle, short-range ordered arrays of metal nano-disks characterized by a more symmetric shape and tunable average interparticle distance but at the expense of array periodicity [
23].
Upon interaction with visible light, electromagnetic field distribution is not uniform on different arrays, depending on the plasmonic nano-structure size, shape, spacing, and planar arrangement. Local intense areas of electromagnetic fields (EM) are expected to occur at sharp edges, nanoparticle gaps, and crevices, or other geometries with a sharp roughness. The different EM field distribution means a different ability in optically transducing biomolecular events at their surfaces.
In this work, we aim to compare sensing functionalities of long-range ordered Au nano-prisms and short-range ordered Au nano-disks arrays as transducing platforms for the sensitive detection of LPS in a liquid environment. The realized plasmonic transducers are integrated with a proper microfluidic platform in order to realize the prototype of a low-cost LOC biosensing platform intended for the detection of bacterial endotoxin to be used on a drug manufacturer site. Thus, a novel concept of the quality test is proposed, trying to exploit the advantages of the proposed techniques: reducing sample volume and data management and easy integration with information processing will be of great help for faster production and drug distribution.
2. Materials and Methods
2.1. Materials
Glass substrates (25 × 25 mm2) were obtained from EOT Electro-Optical Technologies. Polystyrene (PS) spheres with a diameter of 80 nm, suitable for short-range order organizations, were purchased from Invitrogen and Polyscience Inc. Poly(diallyl dimethyl-ammonium chloride) (PDDA, MW 200,000–350,000, Sigma-Aldrich, Darmstadt, Germany), Poly(sodium 4-styrene sulfonate) (PSS, MW 70,000, Sigma-Aldrich, Darmstadt, Germany) and Poly(allylamine hydrochloride) (PAH, MW 50,000, Sigma-Aldrich, Darmstadt, Germany) were purchased from Sigma-Aldrich. On the contrary, polystyrene nanospheres with a 500 nm diameter were purchased from Sigma-Aldrich in aqueous suspensions with a concentration of 10 wt%; the coefficient of variation (CV) was specified to be 2.4%, while the density of the PS particles is 1.05 g/cm3.
Protein A, N-hydroxysuccinimide (NHS), N-(3-dimethylamino- propyl)-N0-ethylcarbodiimide hydrochloride (EDAC), and ethanolammine and 11-mercaptoundecanoicacid (11-MUA) were purchased from Sigma-Aldrich (Darmstadt, Germany). Anti- E. Coli Lipopolysaccharides (LPS) Antibody (Ig2b.k–Clone N.15j140), and Lipopolysaccharide from E. coli 0157:H7 were purchased from Abcam (Cambridge, United Kindom). Hybridization measurements were performed using a saline phosphate buffer (PBS, pH 7.4, Sigma-Aldrich, Darmstadt, Germany). Deionized water was used for the preparation of all solutions.
All experiments were carried out at a constant temperature of 24 °C, at humidity and temperature laboratory-controlled conditions.
2.2. Transducers Nanofabrication and Surface Functionalization
Plasmonic transducers nano-fabrication exploited the advantages of low-cost template-mediated techniques. Exploiting the advantages offered by top–down and bottom–up approaches, these methods provide an exciting alternative to sequential and costly fabrication techniques. The self-assembly of colloidal polystyrene nanoparticles by capillary and electrostatic interactions with planar substrates is the starting point of the procedure; we have tested both nano-fabrication routes.
In the first case, Nanosphere Lithography (NSL) enabled the fabrication of long-range order assemblies of Au nano-prisms on a glass substrate by depositing the metal through the apertures of an extremely cheap lithographic mask composed by a single and homogenous layer of polystyrene (PS) nanospheres. The PS nanospheres are self-assembled at the air/water interface in a homemade apparatus schematically described in [
23].
The fabrication setup enables dispensing the particle suspension on a tilted glass slide with a controllable rate of release. A high-quality colloidal mask can only be obtained with substrates presenting a homogeneous hydrophilic surface. To achieve this condition, a pre-cleaning treatment was performed by ultrasonication with acetone, ethanol, and deionized water. Then, a well-established hydrophilization process based on oxygen plasma treatment (Diener Atto, 1 mbar O
2, 100 W, 5 min) has to be applied immediately before the deposition procedure. Furthermore, a 1:1 mixture of alcohol and polystyrene water solution was prepared to facilitate the trapping of polystyrene nanospheres at the air–liquid interface. A motorized syringe pump allows slowly dispensing a controlled volume of the colloidal solution onto the glass slide, enabling the CPA formation at the air/water interface. A two-step water removal realizes the transfer from the air–water interface to a solid substrate. This procedure allows avoiding possible monolayer damages by using a peristaltic pump and a self-vaporization step. After realizing the CPA, this approach allows the fabrication of nanostructured materials on the desired substrate by depositing metals through the small openings of a low-cost lithographic mask; further details can be found in Colombelli et al. [
23]. In this work, the assembled monolayers have been exploited to realize the highly ordered array of a gold nano-prism characterized by a triangular shape. A physical deposition technique based on Electron Beam Evaporation (EBE) was adopted for the nano-structures fabrication. In particular, an ordered array of Au nano-prisms characterized by a triangular shape has been fabricated by depositing on the mask a layer of gold with a thickness of 40 nm. To improve the adhesion of Au structures on the glass substrate, a 2 nm thick Titanium layer was prepared. After the metal deposition, a mechanical lift-off process was performed to remove the colloidal mask revealing the fabricated nano-structures. A different fabrication strategy was developed for the realization of a short-range ordered array of colloidal nanospheres. The substrate is washed with acetone and isopropanol and then functionalized with polyelectrolytes layers by the layer-by-layer technique. In this way, negatively charged PS particles interact with the positively charged surface in order to facilitate particle absorption by electrostatic interactions as reported in our previous work [
24]: the substrates were coated with of 0.1 wt% PDDA, followed by 0.1 wt% PSS and 0.1 wt% PDDA again by alternately dipping into the respective solutions for 5 min. Then, the polystyrene spheres were assembled by immersing the functionalized substrates into the 0.2% nanospheres suspension in 2 mM solution of NaCl. After the optimized deposition of the PS particles, the samples were rinsed in boiling milli-Q water for 60 s to eliminate the excess of particles, rinsed again with milli-Q water at room temperature, and carefully dried in a nitrogen flow.
Successively, the realization of the gold nano-disk lattices is realized by Argon Reactive Ion Etching for 6 min to selectively remove the portion of the gold film not protected by the nanospheres. Finally, an oxygen plasma treatment was applied for 60 s in order to remove any nanosphere residues, thus revealing on the substrate the fabricated nano-structures.
Before the functionalization step, metal transducers were washed in a boiling solution of H2O2 (30%), NH3 (30%), and milliQ water in a 1:1:5 ratio for 10 min and then rinsed with milliQ water. First, they were cleaned by O2 plasma for 3 min and then immersed in an ethanol solution in order to remove eventual organic residues. A self-assembled 11-mercaptoundecanoic acid (11-MUA) layer on the Au nanostructures surface was prepared by submerging the transducers into a glycerol/ethanol (1:1, v/v) solution containing 150 mM 11-MUA for at least 12 h. For chemical binding between the 11-MUA adsorbed on Au and free amine of protein A, the carboxylic group of 11-MUA was activated by submerging the Au substrate modified with 11-MUA into a solution of 50 mM NHS for 10 min followed by 30 mM EDAC solution. Then NHS/EDAC solution was sent into the test chamber in a recirculation for 30 min in water/ethanol (10/1, v/v). The self-assembled protein A layer was fabricated by the incubation of the activated Au substrate in a solution of 10 mg/L protein A in 10 mM in ultra pure water. Before the immobilization of antibody, the self-assembled protein A layer on the Au substrate was blocked by inactivating the residual carboxyl group of 11-MUA with 1 M ethanolamine.
Once protein A molecules were properly immobilized onto the Au substrate, a solution containing 6 mg/mL of LPS antibodies in PBS buffer was dropped onto the transducers surface. After 1 h of incubation, the surface was washed with PBS buffer and incubated for 20 min with PBS containing 0.1% Tween20, in order to provide antigen access to the binding site of antibody by the separation of clustered antibody molecules. PBS buffer washing was performed prior to dropping the LPS solution prepared in PBS at an increasing concentration. A final step of washing stopped the experiment at each probed analyte concentration.
2.3. Numerical Methods
Different numerical models based on Finite Element Method (FEM) have been developed to theoretically explore the optical response of the fabricated nano-structures. In particular, a hexagonal array of gold nano-prisms and planar distributions of gold nano-disks on glass substrates have been considered. Several vital parameters have been modified to obtain a deeper understanding of their optical and electrical properties when the LSPR conditions are satisfied.
Owing to the hexagonal symmetry of the Long-Range (LR) periodic array and the perpendicular excitation using a linearly polarized light, a 3D simulation characterized by the geometry reported in
Figure 1 can be developed to reduce the computational cost of the problem significantly. The geometries adopted in this model are characterized by specific dimensions derived by considering a close-packed array of hexagonal distributed nanospheres with a diameter of 500 nm. Starting from the bottom of the computational domain reported in
Figure 1, the first domain represents the glass substrate, on which the gold nano-prisms have been fabricated. As reported in
Figure 1, a truncated pyramid characterized by a triangular shape and a thickness of 40 nm was chosen to simulate the nano-structures. The last domain at the top represents the external environment. With appropriate boundary conditions, the built geometry represents the unit cell of the analyzed system.
On the contrary, the short-range (SR) ordered nano-disks have been simulated by considering the average inter-particles distance. Therefore, a homogeneous distribution of gold nano-disks can be approximated to a square periodic array of interacting particles. A 3D simulation characterized by the geometry reported in
Figure 1 can be developed in this case, with a physical domain distribution similar to the one developed for LR ordered nano-structures. A cylinder characterized by a diameter of 80 nm and a thickness of 20 nm was chosen to simulate the metal structures.
A wavelength modulation technique was implemented in the model to investigate the optical response of these nanostructures. In particular, the LSPR generation was induced by simulating a polychromatic light beam coming from the top of the simulation domain. To calculate the reflection and transmission coefficients of the system, port boundary conditions were set for both the upper and lower faces of the simulation domain. Different boundary conditions were used on the unit cell’s sides to simulate an infinite array of LR and SR ordered interacting plasmonic nano-structures characterized by hexagonal and square periodicity, respectively. The optical absorbance of single and periodic distributions of metal nano-structures characterized by different geometries can be predicted with the developed models, providing theoretical support to our experimental findings. In addition, the electric field distribution and the E/E0 field amplification were calculated to investigate the local field enhancement that arises near the particle surface when the resonance conditions are satisfied.
2.4. Optical Characterization
The optical characterization was conducted by performing absorption measurements in the UV-Visible (UV-VIS) spectral range by using a Cary500 UV-visible spectrophotometer (Varian Varian, Palo Alto, CA, USA). On the other hand, the plasmonic transducer characterization in transmission configuration and liquid phase was performed by using a compact optical fiber system equipped with a tungsten halogen light source (LS-1, wavelength range 360–2000 nm, Ocean Optics, Oxford, United Kindom), a portable spectrophotometer (USB2000 UV–Vis, wavelength ranging between 250 and 1100 nm, Ocean Optics, Oxford, United Kindom), and a couple of optical fiber probes (R-400-7 UV-VIS, Ocean Optics, Oxford, United Kindom). Polychromatic radiation emerging from the optical fiber was vertically focused onto the sample surface. Coupled with the detection fiber probe, the transmitted light was analyzed in a desired spectral range at room temperature using a portable UV-VIS spectrophotometer. The sensing response of the plasmonic transducers was investigated by following the spectral shift of the typical LSPR absorption peak in the presence of liquid characterized by increasing refractive indices. Absorption measurements were performed in air (n = 1.00), water (n = 1.33), and different water/glycerol solutions. The presence of increasing glycerol concentrations enables exploring the transducers response in a selected range of refractive indices that goes from 1.33 (pure water) to 1.47 (pure glycerol).
2.5. Morphological Characterization
A Scanning electron microscope (Carl Zeiss SEM system) with an accelerating voltage of 5 kV was used to analyze the morphology and size of the realized nano-structures. SEM images have been acquired in top view configuration through an in-lens detector for secondary electrons. Image processing and analysis of particle distributions was performed by using ImageJ 1.42R (National Institutes of Health USA).
2.6. Integration of Plasmonic Biosensor into a Portable Lab-on-Chip Device
To develop a cost-effective, portable, and easy-to-use biosensing device, the fabricated nano-structures have been integrated on a miniaturized and straightforward lab-on-chip (LOC) platform. As a proof-of-concept, the LSPR platform operating in transmission configuration was developed, integrating the fabricated nano-structures into a suitable 2.5 × 2.5 cm2 polydimethylsiloxane (PDMS) home-made microfluidic chip, which enables low-sample consumption and provide sensitivity and real-time response, raising the innovation in the design of biosensors as complete LOC device.