Hibernation and Radioprotection: Gene Expression in the Liver and Testicle of Rats Irradiated under Synthetic Torpor

Abstract

Hibernation has been proposed as a tool for human space travel. In recent years, a procedure to induce a metabolic state known as “synthetic torpor” in non-hibernating mammals was successfully developed. Synthetic torpor may not only be an efficient method to spare resources and reduce psychological problems in long-term exploratory-class missions, but may also represent a countermeasure against cosmic rays. Here we show the preliminary results from an experiment in rats exposed to ionizing radiation in normothermic conditions or synthetic torpor. Animals were irradiated with 3 Gy X-rays and organs were collected 4 h after exposure. Histological analysis of liver and testicle showed a reduced toxicity in animals irradiated in torpor compared to controls irradiated at normal temperature and metabolic activity. The expression of ataxia telangiectasia mutated (ATM) in the liver was significantly downregulated in the group of animal in synthetic torpor. In the testicle, more genes involved in the DNA damage signaling were downregulated during synthetic torpor. These data show for the first time that synthetic torpor is a radioprotector in non-hibernators, similarly to natural torpor in hibernating animals. Synthetic torpor can be an effective strategy to protect humans during long term space exploration of the solar system.

1. Introduction

Torpor is a peculiar state characterized by a drastic reduction in metabolic rate that leads to a decrease in body temperature proportional to the temperature gradient between the body and the environment [1]. Torpor is used by mammals as an energy saving strategy and can last from the few hours of an episode of daily torpor to many months during hibernation [2]. In terms of evolution, it is highly likely that torpor was a trait of the proto-mammal; therefore the gene set required to survive such state should reasonably be common among mammals [3,4].

Mimicking torpor in non-hibernators has always been an ambitious goal [5,6]. Indeed, such possibility would open interesting opportunity and could be very valuable in many clinical settings [7] but could also lead to applications in the field of space exploration [8]. To this last end, it is noteworthy that the European Space Agency (ESA) has a research group specifically focused on hibernation research for space exploration [9,10,11]. Besides the reduced need of energetic supply, torpor can in fact be extremely valuable for space exploration in virtue of the increased radioprotection that provides [12].

Biological damage from radiation is probably the most serious challenge that limits the ability for humans to engage in long term mission, because of the exposure to galactic cosmic radiation [13]. At the moment, shielding is not too effective against these kind of radiation, since mass constraints limits its use [14]. The Mars Science Laboratory measurements showed that the average dose-rate in deep space is about 1.8 mSv/day [15]. Therefore, a mission to Mars would exceed the career dose limit of 1 Sv of ESA astronauts and the gender- and age-specific limits for National Aeronautics and Space Administration (NASA) astronauts.

Hibernation would therefore be an effective solution for long term mission and was proposed to this end many years ago [16,17]. In fact, it was shown that hibernators are able to survive higher doses of radiation during torpor compared to the euthermic period [18]. This finding was confirmed for squirrels [19], hamsters [20] and mice [21]. The mechanism that mediates such enhanced radioprotection is not known; whereas earlier works were pointing out at the halt of cell replication, recent data suggest that the mechanism may lay in a different dynamics of the DNA damage and repair pathway [21,22].

Recently, a phenotype very much resembling torpor was induced in non-hibernators such as the rat by inhibiting the neurons within the region of the Raphe Pallidus (RPa) [23], a key brainstem region in the control of body temperature and energy expenditure in mammals [24]. It was proposed to call this peculiar state with the term “Synthetic Torpor” [7]. While the induction of synthetic torpor in humans has yet to be proven viable, such state was suggested as an effective way to transport animals in space both for scientific reason (i.e., experiments on the International Space Station or yet to come further permanent space stations) and for support a human colony [25]. However, so far, there is no evidence for the torpor-induced radioprotection to be active also during synthetic torpor induced in non-hibernators.

In this paper, we present preliminary data analysing gene expression in the liver and in the testis of rats which were irradiated during synthetic torpor compared with normothermic controls, showing that radioprotection is also induced during synthetic torpor and supporting the idea of using this state to preserve the health of humans and animals during long term space travels.

2. Results

Rats induced into synthetic torpor showed a regular decrease in brain temperature (Tbr), which reached a nadir just before the irradiation (Figure 1) (Hypothermia, Tbr: 22.2 ± 1.1; Control, Tbr: 37.54 ± 0.24). Of the 12 genes analysed (Table S1), three genes were significantly downregulated in the Hypothermic group compared with the Control group: ATM (Fold regulation: −2.90; p = 0.02), Pfkb (Fold regulation: −2.73; p = 0.02) and Pdfe1α (Fold regulation: −2.80; p = 0.01) (Figure 2). ATM is of particular interest, since it is involved in repairing DNA double strand breaks. The lower expression of ATM in the group induced into synthetic torpor suggest that less damage was induced by radiation in the cell of the animals induced into synthetic torpor or that, for other reason, other DNA repair pathways become activated in such conditions.

Qualitative analysis following the histological observation shows that hepatic tissues of normothermic rats were affected by the irradiation, whereas the hypometabolic-hypothermic state of synthetic torpor provide in the liver a protection to radiation damage. Normothermic rats showed altered morphology of the hepatocytes. At the light microscope level, their cytoplasm was low dense and markedly vacuolated, as well the nuclei appeared shrunken with irregular shape and chromatin condensation (Figure 3A,B, arrows). Such effects were not present in the hepatic tissue of the rats induced into synthetic torpor, hepatocytes possessed a dense cytoplasm and regular and round nucleus in which dispersed chromatin and nucleoli were detectable (Figure 3C,D). An abundance of red blood cells is also observable in the synthetic torpor group (Figure 3C,D, arrows).

A more extensive analysis of gene expression was performed on the testicles. Rats induced into synthetic torpor showed a downregulation of many of the genes involved in the DNA Damage Signaling. Of the 84 genes analyzed (Table S2), 7 genes were significantly downregulated in the Hypothermic group: Bbc3 (fold regulation: −5.49; p = 0.01), Fancg (fold regulation: −1.58; p = 0.04), Mbd4 (fold regulation: −1.79; p = 0.04), Mgmt (fold regulation: −1.84; p = 0.04), Pcna (fold regulation: −1.74; p = 0.02), Ppm1d (fold regulation: −1.67; p = 0.003), Rad18 (fold regulation: −1.66; p = 0.03) (Figure 4) (p values and fold regulation for all the genes analyzed are reported in Table S3).

Histological analysis performed on cross sections of seminiferous tubules of testis shows alteration on the differentiation and cells stratification in the testis of normothermic rats (Figure 5A,B), in particular disorganization of the germinal cells and on their junctions were detected. These effects were not found in the testis tissue of the rats induced into synthetic torpor, in which the structures could be almost comparable to the normal organization (Figure 5C,D)

3. Discussion

The main finding reported in this paper is the significant protection to ionizing radiation damage induced by synthetic torpor in non-hibernating analysis. Histological analysis of liver and rats exposed to 3 Gy X-rays (see Figure 3 and Figure 5) show a reduced toxicity compared in animals artificially in torpor compared to controls irradiated at normal temperature and metabolic activity. This protection is consistent with old data in hibernating animals (reviewed in Reference [8]).

We have then investigated the molecular mechanisms underlying the increased radioresistance and found downregulation of ATM and several other genes involved in the DNA damage signalling. ATM expression was reported to be affected by deep hypothermia (0.8 °C) in cell culture [26,27] and we show here that synthetic torpor leads to similar effect in vivo.

ATM is a key gene in activating the repair process of DNA double strand breaks. The reduced expression of such gene suggest that the hepatocytes of the hypothermic group received less damage form the irradiation compared with the control group or that their DNA damage response is reduced.

Several papers suggested that the enhanced radioprotection that is observed during hypothermia both in vivo [21] or in vitro [22], may be caused by some change in the activation of the DNA repair pathways. In particular, data from Gosh and co-workers [21] show that the radioprotective effect can be induced by hypothermia within three hours after the irradiation. Such results apparently rules out other hypothesis that torpor-induced radioprotection could be caused by stopping cell proliferation or by reducing the oxygenation of tissues, even if these factors may certainly still play a role.

ATM and the DNA damage signaling genes are less activated either because cells in the hypothermic tissue received less DNA double strand breaks or because the reduced signaling cascade is part of the protective effect. It is however unlikely that the effect can simply be explained by hypothermia. In fact, the observed protection in genetic damage at low temperature has been associated to enhanced ATM activation [27], while we found a downregulation. On the other hand, ATM is the first post-irradiation protein to activate programmed cell death pathway [28]. In fact, pharmacological inhibition of ATM significantly reduces the radiosensitivity of unstimulated human lymphocytes [29]. The effect of synthetic torpor seems to be more similar to the pharmacological inhibition of ATM than to the simple hypothermia.

Histologically, liver cell of hypothermic rats appear normal, unlike the ones of the normothermic ones, suggesting that the radiation dosage was high enough to induce damage visible after a short time (4 h). Liver cells are extensively vacuolised, a sign that was reported to be a response to a stress agent [30,31]. Testicles also appear to be damaged by the irradiation in the normothermic group. In the present experiments only early normal tissue toxicity was evaluated. It is likely that late toxicity will also be strongly modified. ATM is involved in cell cycle progression post-irradiation [32] and the impact of irradiation during synthetic torpor on replication and late toxicity remain to be evaluated.

The reduction in metabolism in the synthetic torpor group did not suppress gene expression in general. In the liver, the gene Nfil3, for instance, results upregulated in this group. Such upregulation could be related to the involvement of Nfil3 in the negative feedback to the expression of the clock gene Per2, possibly adapting the clock to the reduced metabolism.

4. Methods

All the experiments were performed in accordance with the DL 26/2014 and the European Union Directive 2010/63/EU under the supervision of the Central Veterinary Service of the University of Bologna, under the approval of the Italian National Health Authority (decree 779/2017-PR, 16 October 2017).

4.1. Animal Housing

Experiments were conducted on 10 male Sprague-Dawley rats (Charles River), weighing 250–300 g. After their arrival, animals were housed for one week at standard laboratory conditions: light-dark (LD) cycle 12 h:12 h (L 09:00 h–21:00 h) with ad libitum access to food (4RF21 diet, Mucedola) and water, at an ambient temperature (Ta) of 24.0 ± 1.0 °C. During the adaptation, animals were housed in pairs in Plexiglas cages (Techniplast) containing dust-free wood shavings and the bedding was changed every two days.

4.2. Surgery

After one week of adaptation, rats underwent surgery under general anaesthesia (Ketamine-HCl, Imalgene 1000, Merial, 100 mg/Kg, intraperitoneally). After assessing the adequacy of the surgical plane of anaesthesia, animals were implanted with a thermistor probe in the right anterior hypothalamus to record deep brain temperature and with a microinjection guide cannula (C315G-SPC; Plastics One; internal cannula extension below guide: +3.5 mm) stereotactically implanted within the brainstem region of the Raphe Pallidus (RPa) (coordinates (mm) −3.4 posterior from the interaural, 0.0 Lateral, −9.5 from the brain surface, following the stereotactic map in reference [33]. To assess the correct positioning of the guide cannula, a functional intraoperative test was carried out: the GABA-A agonist muscimol (1 mM) was dissolved in artificial cerebrospinal fluid (ACSF) and injected (100nL) within the RPa and tail temperature was monitored through a temperature probe positioned on the tail. Previous reports showed that the inhibition of Raphe Pallidus neurons causes vasodilation [34]. The position of the cannula was then assumed correct if a consistent increase in tail surface temperature was observed within 5 min from muscimol injection. Lastly, four stainless steel screws were implanted, to ensure all the inserted probes in place; everything was then secured with dental resin (ResPal, Salmoiraghi Produzione Dentaria), covering the whole surgical field, incorporating the cannula, the thermistor and the screws. Rats were then administered with antibiotic (benzathine benzylpenicillin, 12.500.000 U.I., dihydrostreptomycin sulphate 5 g/100 mL, Rubrocillina Veterinaria, Intervet—1 mL/kg), analgesics (Carprofen—Rimadyl, Pfizer—5 mg/kg) and rehydrated with 5 mL saline solution. Animals were constantly monitored until regaining of consciousness and then left to recover for 1 week under standard laboratory conditions. The animal’s pain, distress or suffering symptoms were constantly evaluated using the Humane End Point (HEP) criteria. After at least one week of recovery from surgery, rats were moved to the experimental cages. The cage containing the animal was placed inside a thermoregulated, sound-attenuated box, equipped with a ventilation system. The cage was instrumented with a rotating swivel, connected to the external amplifiers. Forty-eight hours prior to the experiment, the animals’ thermistors were wired to the swivels, in order to acquire baseline deep brain temperature (Tbr) and animals were exposed to Ta 15 °C and constant darkness. Tbr) was amplified (mod. Grass 7P511L, Astronova, West Warwick, RI, USA) and filtered at 0.5 Hz (high-pass), analogue to digital converted to 12 bit (CED Micro MK 1401 II), acquired (50Hz sample rate) and stored on a digital hard disk.

4.3. Experimental Protocol

Animals were divided in two groups:

(1)

Hypothermia (n = 5): After a 7-day recovery from surgery, animals were injected with the GABA-A agonist muscimol (1 mmoL) within the Raphe Pallidus (RPa). Each animal received, starting from 07:00 h, one injection/hour (100 nL). All animals entered synthetic torpor shortly after the first injection and maintained such condition until the end of the experiment.

(2)

Control (n = 5): After a 7-day recovery from surgery, animals were injected with artificial cerebrospinal fluid (ACSF) within the RPa. Each animal received, starting from 07:00 h, one injection/hour (100 nL).

To minimize any environmental difference, animals underwent experiment in couples: each animal from the Hypothermia group underwent the procedure on the same experimental day as its corresponding Control. At 11:00 h, animals were moved to a portable thermoregulated and sound attenuated radiotransparent custom-made box, at Ta 15 °C. When inside the box, animals were transported to the Department of Nuclear Medicine, S.Orsola Hospital, to be X-rays irradiated. After receiving the radiation dose, animals were returned to the experimental cage. Four hours after the irradiation, animals were given a lethal dose of anaesthetic and several organs were extracted for histological and molecular assays (Figure 6).

4.4. Radiation Data

Exposure to radiation was accomplished by irradiating the thermoregulated transportable box from above, using an X-ray tube operating at 180 kV, producing a uniform radiation field in the whole region where the animal resides. Animals were irradiated with a dose of 3 Gy total body, at a dose rate of 23 cGy/min (Figure 7).

4.5. Gene Expression and Analysis

4.5.1. Liver

Gene expression was assessed by a Custom RT2 Profiler PCR Arrays from Qiagen. In this analysis, 13 genes were profiled on 1 array in a biological triplicate. Each array also contains a panel of controls to monitor genomic DNA contamination (GDC) as well as controls for the first strand synthesis (RTC) and the real-time PCR efficiency (PPC). As a preliminary analysis, we analysed the expression of several genes involved in different pathways, from cell metabolism, to regulation of clock genes to the DNA damage pathway in order to have an overview of the cell functions (Table S1).

4.5.2. Testicle

Gene expression was assessed by a DNA Damage Signaling RT2 Profiler PCR Arrays from Qiagen. In this analysis, 89 genes were profiled (Figure S2) on 3 array in a biological triplicate. The array contains also a panel of controls to monitor genomic DNA contamination (GDC) as well as controls for the first strand synthesis (RTC) and the real-time PCR efficiency (PPC).

The protocol used was the following:

The mature RNA was isolated from tissue (liver and testicles) using an RNA extraction kit (Qiagen RNeasy Plus Micro Kit, Hilden, Germany) according to the manufacturer’s instructions, and its quality was determined using a nanodrop (NanoDrop™ 2000 Spectrophotometers, Thermofisher). 1000 ng of RNA was used for the reverse transcription. It was reverse transcribed using a cDNA conversion kit (Qiagen QuantiTect Reverse Transcription Kit, Hilden, Germany). For the liver analysis, the cDNA in combination with RT2 SYBR^® Green qPCR Mastermix was used on a Custom RT2 Profiler PCR Array, while for the Rat testicles the gene expression was assessed using a real-time RT2 Profiler PCR Array (QIAGEN, Cat. no. PARN-029Z) in combination with RT2 SYBR^® Green qPCR Mastermix (Cat. no. 330529).

A CFX96 Biorad machine was used with the following cycles: Cycle 1; 10 min duration, 95 °C temperature; Cycle 40; 15 s duration and 95 °C temperature; 1 min duration, 60 °C temperature. CT values were exported to an Excel file to create a table of CT values. This table was then uploaded to the data analysis web portal at http://www.qiagen.com/geneglobe. Samples extracted from rats irradiated and not-hibernated, were assigned to the control group, whereas samples extracted from rats irradiated and hibernated were assigned to the test group. CT values were normalized based on a manual selection of reference genes.

The data analysis web portal calculated the fold change using the delta-delta CT method, in which the delta CT is calculated between gene of interest (GOI) and an average of housekeeping genes (HKG), followed by delta-delta CT calculations (delta CT (experiment)—delta CT (control)). The fold change is then calculated using the 2^{(delta-delta CT)} formula.

The p values were calculated based on a Student’s t-test of the replicate 2^{(-Delta CT)} values for each gene in the control group and treatment groups.

Gene expression data are presented with a Volcano Plot scheme. The volcano plot helps quickly identify significant gene expression changes. The volcano plot displays statistical significance versus fold-change on the y- and x-axes, respectively. The volcano plot combines a p-value statistical test with the fold regulation change enabling identification of genes with both large and small expression changes that are statistically significant.

4.5.3. Histology

Liver and testicle samples were processed for histological investigations. Briefly, tissue samples were fixed in 4% PFA at 4 °C overnight, dehydrated in an ascending graded ethanol series, cleared with xylene for 30 min and embedded in paraffin at 58 °C. Sections (7 μm thick) were stained with haematoxylin–eosin to show general morphology.

5. Conclusions

This is the first experimental measurement of toxicity and gene expression in animals exposed to ionizing radiation under synthetic torpor. We have demonstrated that synthetic torpor increases radioresistance in non-hibernating animals (rats). The results indicate that synthetic torpor is a potential tool to enhance radioprotection in living organism during long term space mission.