3.1. The Effect of Surface Preconditioning on the Physico-Chemical Characteristics of the SPE Surface
The electrochemically active surface areas of pristine and preconditioned electrodes were assessed from cyclic voltammograms of K
3[Fe(CN)
6]/K
4[Fe(CN)
6] (
Figure S1) based on Randles–Ševčík equation:
where the constant k = 2.69 × 10
5; n is the number of moles of electrons electrochemically transferred per mole of electroactive species;
A is the area of the electrode in cm
2; D is the diffusion coefficient in cm
2 s
−1;
cb is the bulk solution concentration in mol L
−1; and
υ is the potential scan rate in V s
−1.
The DRP-C110 SPEs from Metrohm Dropsens have working electrodes with a diameter of 4 mm; therefore, their geometric surface area (not accounting for surface roughness) is 12.57 mm
2. The electroactive surfaces were determined to be 8.38 ± 0.57 mm
2 for pristine electrodes, 6.45 ± 0.04 mm
2 for H
2O
2-treated electrodes, 6.67 ± 0.58 mm
2 for H
2SO
4-treated electrodes, 7.47 ± 0.07 mm
2 for positive-plasma-treated electrodes, and 7.05 ± 0.53 mm
2 for negative-plasma-treated electrodes (average ± SD,
n = 3). The discrepancy between geometric and electroactive surface area is due to the conductive paste containing a dielectric binder that hinders the electron transfer across the working electrode. In addition, when the net surface charge becomes more negative after preconditioning, the electrode surface repels the negatively charged [Fe(CN)
6]
3−/[Fe(CN)
6]
2− ions to a greater extent, and the electroactive surface area apparently becomes somewhat smaller. The effect of preconditioning on the electrode surface characteristics seems complex, so the observed changes in the electroactive surface area are likely caused by an interplay of different factors. Most importantly, the electrochemical response becomes stable after preconditioning together with significantly enhanced electrode-to-electrode reproducibility; moreover, the positive and negative discharge exhibited the most favorable effect on the stability and reproducibility of the SPE surface, whereas the preconditioning with H
2SO
4 and particularly with H
2O
2 exhibited somewhat lower effects; these results are summarized in
Figures S2–S5.
Electrochemical impedance spectroscopy measurements are shown in
Figure 1 (Nyquist spectra on the left, Bode modulus impedance spectra in the middle, and Bode phase spectra on the right). Three replicate measurements were performed for each electrode, resulting in a high degree of repeatability (
Figure 1). The shape of the Bode modulus impedance spectra and Bode phase spectra in the middle-frequency range indicate the capacitive behavior of the double layer and the charge transfer resistance. In the low-frequency range, the deviation from the
x-axis (Z
real) in the Nyquist spectra and the phase angle approaching 45° in the Bode phase spectra indicate a diffusion-controlled process for each electrode. The equivalent electrical circuit of such a system can be characterized by R
s(C
dl(R
ctW)), where R
s, C
dl, R
ct, and W stand for solution resistance, double layer capacitance, charge transfer resistance, and Warburg diffusion, respectively. Based on this, it can be concluded that the electrochemical process is both kinetically and diffusion controlled for all five electrodes.
3.2. The Effect of Surface Preconditioning on the Amount of Adsorbed Proteins
The effect of the surface preconditioning strategy on protein adsorption efficiency and kinetics was assessed with a commonly employed depletion approach [
2]. This technique requires a highly accurate and precise quantification procedure because the amount of adsorbed proteins per surface area is usually low. To this end, we employed one of the most sensitive protein assays currently available on the market, i.e., the FluoroRed 600 fluorescence-based protein quantification assay [
16]. As per the supplier’s information, the linear concentration range of this assay is 0.05–5.00 μg mL
−1, which is up to 500 times more sensitive than the classic bicinchoninic acid assay, the latter exhibiting a linear range of 25–2000 µg mL
−1 [
17]. The amount of adsorbed proteins was calculated by subtracting the mass of aspirated proteins determined with the assay from the mass of proteins added to the electrodes before incubation.
Table 1 shows that the percentages of adsorbed BSA at the lower applied concentration (i.e., 10 μg mL
−1) were similar for all preconditioning strategies, except for the H
2O
2-treated electrodes, and ranged from 81% to 87%. For the H
2O
2-treated electrodes, the percentage of adsorbed BSA was slightly higher, namely 92%. These values were comparable with those for protein A (including the H
2O
2-treated electrodes with over 98% adsorption) at the same applied concentration, except for positive-plasma-treated electrodes, which adsorbed only 61% of the incubated protein A. However, at the higher applied concentration (i.e., 20 μg mL
−1), the difference between BSA and protein A became more significant. While the percentages of adsorbed BSA remained in roughly the same range as at the lower applied concentration (i.e., resulting in ca. doubled masses of adsorbed protein at the SPE), the percentages of adsorbed protein A markedly decreased, reaching as low as 33% for the H
2SO
4-treated electrodes. This means that the mass of adsorbed protein A started plateauing between ca. 80 ng and 130 ng (
Table 1—for both examined concentrations), depending on the preconditioning strategy, except for the H
2SO
4-treated electrodes (at 20 μg mL
−1 of protein A) and for positive-plasma-treated electrodes (at 20 μg mL
−1 of protein A); namely, a positive glow discharge was the only preconditioning strategy where the mass of adsorbed protein A doubled from the lower to the higher applied concentration (i.e., adsorption of 61% and 63% protein A at 10 μg mL
−1 and 20 μg mL
−1 applied protein A, respectively). This implies slower adsorption kinetics in the case of positive-plasma-treated electrodes, which is visible also in the electrochemical adsorption kinetic study (
Section 3.3). Moreover, the electrochemical study also revealed an unusual pattern of BSA adsorption kinetics at positive-plasma-treated electrodes.
These results are in line with some previous observations [
2]. The amount of adsorbed proteins depends on their size, charge, structural stability (“hard” or “soft”), amino acid composition, and steric conformation. BSA is known to have low internal stability and belongs to the so-called “soft” proteins, along with, e.g., immunoglobulins, casein, hemoglobin, and catalase. These proteins adsorb practically on all surfaces regardless of electrostatic interactions and may greatly change their conformation upon adsorption. For BSA, the adsorption has generally been shown to be irreversible [
2]. Both the BSA’s structural malleability and tendency towards irreversible adsorption may explain the observed relatively high adsorption degrees that were practically independent of the electrode preconditioning protocol.
Protein A is also known to be structurally flexible, owing to six- to nine-amino-acid long bendable linkers between each of its globular IgG-binding domains [
18]. However, our results nevertheless show that its adsorption depended highly on the electrode surface modification. In this regard, protein A interacted with the surface of SPEs more like a “hard” protein, except in the case of positive-plasma-treated electrodes, which follow the concentration dependence similarly as in the case of BSA adsorption.
Notably, an interesting insight can be gained by calculating the mass of proteins adsorbed per electrochemically active area of the working electrode (
Table 2). Here, the differences between the two proteins and the behavior described previously become even more apparent. The masses of adsorbed BSA per electrochemically active area at a concentration of 20 μg mL
−1 are nearly double the masses adsorbed at a concentration of 10 μg mL
−1 and reach up to 26 ng mm
−2 for the H
2SO
4-treated electrode, whereas the masses of adsorbed protein A per electrochemically active area show a tendency towards plateauing and do not exceed 20 ng mm
−2. This behavior has implications for the construction of biosensors and for the interpretation of electrochemical readings. From
Table 2 and protein molecular weights, we can calculate the number of molecules adsorbed per electrochemically active area, and from protein sizes, we can thus calculate the net surface of adsorbed proteins. For example, BSA (66 kDa) is known to be a prolate ellipsoid with a size of 140 Å (14 nm) at its major axis and 40 Å (4 nm) at its minor axis [
19]. If we thus (somewhat simplistically) presume that its side-on orientation takes up 44 nm
2, we can calculate that in the case of 85% adsorbed BSA (e.g., for a negative-plasma-treated electrode at 20 µg mL
−1), its surface corresponds to ca. 68 mm
2, which is about five times larger than the geometric area of the working electrode. This implies that the proteins are not packed horizontally at the electrode surface but form a more complex 3D structure. A high protein surface coverage is also consistent with the electrochemical study carried out in the next section, which shows relatively strong signal attenuations after protein adsorption. This means that to retain suitable sensitivity after the complete sensing architecture is created, one should start with a more sparsely adsorbed base layer. Accordingly, this leaves a higher degree of surface unoccupied and free for non-specific binding of other molecules, especially in real samples, an issue that has been recently addressed in detail by Frutiger et al. [
20].
3.3. The Effect of Surface Preconditioning on the Adsorption Kinetics of BSA and Protein A—Electrochemical Experiments
The electrochemical study (
Figure 2) demonstrates that the amount of adsorbed proteins at the SPEs noted in
Table 1 does not always straightforwardly translate into the degree of electrochemical signal attenuation, as observed with SWV. Whereas the adsorption kinetics of protein A differs from that of BSA, as also expected from their adsorbed masses, the signal attenuation patterns of electrochemical responses alter much more among different electrode preconditioning strategies than the mass of adsorbed proteins. In addition, the SWV signal attenuation is more pronounced in the case of protein A, particularly in the first 5 min of adsorption, suggesting that the attenuation patterns of SWV signals also involve differences in protein conformation or orientation on the electrode surface and not only their mass. What is more, the adsorption kinetics also cannot be simply ascribed to electrostatic interactions between the proteins and electrode surface, as both proteins are negatively charged at pH 7.5 (at which the experiments were conducted). However, it is clear that all preconditioning strategies improve electrode-to-electrode reproducibility in comparison to pristine electrodes (
Figure 1b and
Figure 2A, see also error bars), which means preconditioning is an important (if not mandatory) step in the biosensor construction despite the complexity of the factors governing the interactions between proteins and electrode surface.
The first pattern that can be almost universally observed between differently preconditioned electrodes is that the SWV signal attenuation is rapid, reaching the plateau in the first 5 to 15 min of incubation (taking into consideration all three examined concentrations). This is particularly well-pronounced, for example, for the negative-plasma-treated electrodes after the incubation with protein A (
Figure 2I). On the other hand, the adsorption of protein A to pristine electrodes was slower and leveled off after approximately 30 min (
Figure 2A). Moreover, BSA also showed the fastest, most uniform, and consistent adsorption at the negative-plasma-treated electrodes (
Figure 2J).
The next nearly universal observation is the difference in SWV signal attenuation between the electrodes incubated with 5 μg mL
−1 of either protein on the one hand and the higher two concentrations on the other. The quantification of the adsorbed proteins applied at a concentration of 5 μg mL
−1 was not possible because the mass of aspired (i.e., non-adsorbed) proteins would fall below the limit of detection of the FluoroRed 600 assay. However, based on
Table 1, we can easily speculate that the majority of proteins at this concentration became adsorbed. The signal attenuation patterns at the concentration of 5 μg mL
−1 generally show fast and stable adsorption, except for pristine electrodes, where the adsorption of protein A followed a parabolic curve (
Figure 2A) and the adsorption of BSA was uneven (
Figure 2B), again implying the importance of surface preconditioning. The degree of final signal attenuation was generally lower than at the higher two concentrations, ranging from as low as 25% in the case of BSA adsorbed to the positive-plasma-treated electrodes (
Figure 2H) to as high as 75% in the case of protein A adsorbed to the H
2SO
4-treated electrodes after 60 min incubation (
Figure 2C). Evidently, the adsorption of protein A at the concentration of 5 μg mL
−1 was relatively less affected by different preconditioning approaches than in the case of BSA, which exhibited the highest and the most stable adsorption in the case of negative-plasma-treated electrodes.
The adsorption kinetics of both proteins at concentrations of 10 and 20 μg mL
−1 generally resulted in a similar degree of SWV signal attenuation (60–80%), with the exception of BSA adsorbed to the positive-plasma-treated electrodes, where the highest concentration caused almost twice as intense (and stable with time) attenuation as the lower two BSA concentrations exhibiting also less stable signals (
Figure 2H). Although the observations are somewhat more consistent with the mass of adsorbed proteins in the case of protein A (
Table 1), they are more difficult to explain in the case of BSA, where the masses of adsorbed BSA consistently increased with their higher concentration in the modification solution. These phenomena imply a stronger effect of protein A upon the electrochemical response along with the importance of surface preconditioning.
The adsorption kinetics of both proteins at a concentration of 20 μg mL
−1 in some instances (particularly in
Figure 2C–F) show an interesting course that is described in the literature as “overshooting kinetics”. Overshooting kinetics is a consequence of either the change of the protein’s conformation in contact with the surface or its rearrangement from end-on to side-on position with time [
21]. Regardless of its origin, the occurrence of overshooting kinetics demonstrates that the protein layer adsorbed to the tested SPEs was, in some cases, unstable for at least 45 min. Therefore, at least 60 min are needed for the basal protein layer to establish itself before another protein layer should be added. Protein rearrangements on the surface are more pronounced at their higher solution concentrations [
2]; thus, where non-specific binding is not a concern [
20], lower protein concentrations may suffice for the construction of the basal layer as they may help both limit the occurrence of overshooting kinetics, reduce material consumption, and provide a higher electroanalytical signal of a specific redox probe used.
3.4. The Effect of Surface Preconditioning on the Protein–Surface Interaction
Table 3 shows the atomic surface concentrations of the differently preconditioned electrodes; the analyses were performed on the surfaces of the SPE working electrodes. The surfaces consisted of C-, O-, Si-, and Cl-containing species. C and O originate mainly from the SPE working electrode. The contribution to the C and O signals, and consequently the increased surface concentrations of these elements, may also come from the adventitious carbonaceous species (non-oxidized and oxidized) that adsorbed on the surface after sample preparation and during sample transfer to the spectrometer. Cl- and Si-containing species originated from the SPE binder. The most significant difference between the activation methods used is in the O concentration, which was higher for both plasma-treated surfaces (
Table 3). When the plasma sources were used, the surface modification resulted mainly in the formation of a higher surface concentration of carboxyl groups and a lower surface concentration of C=O/C-O groups, as shown in
Figure 3a.
The XPS technique was also used to study the adsorption of protein A and BSA on the differently activated SPE electrodes. A drop of the PBS solution containing protein A and BSA at a concentration of 10 μg mL
−1 was pipetted onto each of the five SPEs electrodes. The drop was left on the electrodes for 1 h. After that, the electrodes were rinsed with ultrapure water and wiped with sensitive cleaning wipes (Kimtech Science, Kimberly Clark Worldwide, Irving, TX, USA) without touching the active area of the working electrode. Then the electrodes were placed in the XPS spectrometer.
Figure 3b–e show that N 1s and S 2p signals were present for all five electrodes, confirming protein A and BSA adsorption on the working electrodes. The N 1s and S 2p spectra for five electrodes with adsorbed protein A had a similar shape and position, indicating a similar N and S atoms environment when adsorbed on the surface. On the other hand, when adsorbed on the negative-plasma-treated surface, the environment of N and S atoms for BSA is different from the other four electrodes. The N 1s peak is shifted to a more negative
EB for the negative-plasma-treated electrode compared to the other four electrodes. In addition, the S 2p spectra in
Figure 3e contain features corresponding to oxidized S atoms (at more positive
EB) and non-oxidized S atoms (at more negative
EB), both indicated by a dotted vertical line. The feature corresponding to oxidized S atoms was not developed in the negative-plasma-treated electrode, whereas the feature for non-oxidized S was present. For the other four electrodes, the feature for oxidized S appeared with the most intense peak for the pristine electrode, followed by the H
2SO
4-treated, the H
2O
2-treated, and the positive-plasma-treated electrode. The latter indicates that BSA adsorption at the negative-plasma-treated electrode occurs via different binding centers compared to BSA adsorption for the other four electrodes.