Dolch, L.-J. and Maréchal, E. Inventory of Fatty Acid Desaturases in the Pennate Diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339
Name | Gene ID | Subcellular Localization | Main Substrate | Main Product | ||||
---|---|---|---|---|---|---|---|---|
Acyl Linked to: | Carbon Number | Presence of Double Bonds | Position and Configuration of the Introduced Double Bond | Overall Structure | Overall Structure | |||
PAD/SAD | Phatraft_9316 | Chloroplast stroma | ACP | 16 and 18 | 0 | Δ9/cis | 16:0-ACP | 16:1Δ9-ACP |
ADS | Phatr_28797 | Endomembrane system | CoA | 18? | 0 | Δ9/cis? | 18:0-CoA? | 18:1Δ9-CoA? |
FAD2 (*) | Phatr_25769 | ER | Phospholipid/ Betaine lipid? | 18 | 1 | Δ12 (or ω6)/cis | 18:1Δ9-PL (-BL?) | 18:2Δ9,12-PL (-BL?) |
ERΔ6FAD (*) | Phatr_2948 | ER | Phospholipid/ Betaine lipid? | 18 | 2 | Δ6/cis | 18:2Δ9,12-PL (-BL?) | 18:3Δ6,12,15-PL (-BL?) |
ERω3FAD (?) | ? | ER | Phospholipid/ Betaine lipid? | 18 | 3 | Δ15 (or ω3)/cis | 18:3Δ6,9,12-PL (-BL?) | 18:4Δ6,9,12,15-PL (-BL?) |
ERΔ5FAD.1 (*) ERΔ5FAD.2 (?) | Phatr_46830 Phatr_22459 | ER | Phospholipid/ Betaine lipid? | 20 | 4 | Δ5/cis | 20:4Δ5,8,11,14,17-PL (-BL?) | 20:5Δ5,8,11,14,17-PL (-BL?) |
ERΔ4FAD | Phatr_22510? | ER | Phospholipid/ Betaine lipid? | 22 | 5 | Δ5/cis | 22:5Δ7,10,13,16,19-PL (-BL?) | 22:6Δ4,7,10,13,16,19-PL (-BL?) |
FAD6 (*) | Phatr_48423 | Chloroplast membranes | sn1/sn2-MGDG/DGDG + SQDG | 16 | 1 | Δ12/cis | 16:1Δ9-sn2-MGDG/DGDG/SQDG | 16:2Δ9,12-sn1/sn2-MGDG/DGDG/SQDG |
PlastidΔ6FAD (?) | Phatr_50443 | Chloroplast membranes | sn2-MGDG | 16 | 2 | Δ6/cis | 16:2Δ9,12-sn2-MGDG | 16:3Δ6,9,12-sn2-MGDG |
Plastidω3FAD/FAD7 (?) | Phatr_41570 | Chloroplast membranes | sn2-MGDG? | 16 | 3 | ω3/cis | 16:3Δ6,9,12-sn2-MGDG | 16:4Δ6,9,12,15-sn2-MGDG |
FAD4 | Phatr_41301 | Chloroplast membranes | sn2-PG | 16 | 0 | Δ3/trans | 16:0-sn2-PG | 16:1Δ3trans-sn2-PG |
Name | Gene ID | Subcellular Localization | Main Substrate | Main Product | ||||
---|---|---|---|---|---|---|---|---|
Acyl Linked to: | Carbon Number | Presence of Double Bonds | Position and Configuration of the Introduced Double Bond | Overall Structure | Overall Structure | |||
PAD/SAD | Phatraft_9316 | Chloroplast stroma | ACP | 16 and 18 | 0 | Δ9/cis | 16:0-ACP | 16:1Δ9-ACP |
ADS | Phatr_28797 | Endomembrane system | CoA | 18? | 0 | Δ9/cis? | 18:0-CoA? | 18:1Δ9-CoA? |
FAD2 (*) | Phatr_25769 | ER | Phospholipid/ Betaine lipid? | 18 | 1 | Δ12 (or ω6)/cis | 18:1Δ9-PL (-BL?) | 18:2Δ9,12-PL (-BL?) |
ERΔ6FAD (*) | Phatr_2948 | ER | Phospholipid/ Betaine lipid? | 18 | 2 | Δ6/cis | 18:2Δ9,12-PL (-BL?) | 18:3Δ6,9,12-PL (-BL?) |
ERω3FAD (?) | ? | ER | Phospholipid/ Betaine lipid? | 18 | 3 | Δ15 (or ω3)/cis | 18:3Δ6,9,12-PL (-BL?) | 18:4Δ6,9,12,15-PL (-BL?) |
ERΔ5FAD.1 (*) ERΔ5FAD.2 (?) | Phatr_46830 Phatr_22459 | ER | Phospholipid/ Betaine lipid? | 20 | 4 | Δ5/cis | 20:4Δ8,11,14,17-PL (-BL?) | 20:5Δ5,8,11,14,17-PL (-BL?) |
ERΔ4FAD | Phatr_22510? | ER | Phospholipid/ Betaine lipid? | 22 | 5 | Δ4/cis | 22:5Δ7,10,13,16,19-PL (-BL?) | 22:6Δ4,7,10,13,16,19-PL (-BL?) |
FAD6 (*) | Phatr_48423 | Chloroplast membranes | sn1/sn2-MGDG/DGDG + SQDG | 16 | 1 | Δ12/cis | 16:1Δ9-sn2-MGDG/DGDG/SQDG | 16:2Δ9,12-sn1/sn2-MGDG/DGDG/SQDG |
PlastidΔ6FAD (?) | Phatr_50443 | Chloroplast membranes | sn2-MGDG | 16 | 2 | Δ6/cis | 16:2Δ9,12-sn2-MGDG | 16:3Δ6,9,12-sn2-MGDG |
Plastidω3FAD/FAD7 (?) | Phatr_41570 | Chloroplast membranes | sn2-MGDG? | 16 | 3 | ω3/cis | 16:3Δ6,9,12-sn2-MGDG | 16:4Δ6,9,12,15-sn2-MGDG |
FAD4 | Phatr_41301 | Chloroplast membranes | sn2-PG | 16 | 0 | Δ3/trans | 16:0-sn2-PG | 16:1Δ3trans-sn2-PG |
Reference
- Dolch, L.J.; Maréchal, E. Inventory of fatty acid desaturases in the pennate diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339. [Google Scholar] [CrossRef] [PubMed]
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Dolch, L.-J.; Maréchal, E. Dolch, L.-J. and Maréchal, E. Inventory of Fatty Acid Desaturases in the Pennate Diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339. Mar. Drugs 2015, 13, 5732-5735. https://doi.org/10.3390/md13095732
Dolch L-J, Maréchal E. Dolch, L.-J. and Maréchal, E. Inventory of Fatty Acid Desaturases in the Pennate Diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339. Marine Drugs. 2015; 13(9):5732-5735. https://doi.org/10.3390/md13095732
Chicago/Turabian StyleDolch, Lina-Juana, and Eric Maréchal. 2015. "Dolch, L.-J. and Maréchal, E. Inventory of Fatty Acid Desaturases in the Pennate Diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339" Marine Drugs 13, no. 9: 5732-5735. https://doi.org/10.3390/md13095732
APA StyleDolch, L. -J., & Maréchal, E. (2015). Dolch, L.-J. and Maréchal, E. Inventory of Fatty Acid Desaturases in the Pennate Diatom Phaeodactylum tricornutum. Mar. Drugs 2015, 13, 1317–1339. Marine Drugs, 13(9), 5732-5735. https://doi.org/10.3390/md13095732