BoLA-DRB3 Polymorphism is Associated with Differential Susceptibility to Bovine Leukemia Virus-Induced Lymphoma and Proviral Load
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Collection and Diagnosis
2.2. BLV Proviral Load Determination
2.3. BoLA-DRB3 Genotyping
2.4. Detection of Anti-BLV gp51 Antibody by Enzyme-Linked Immunosorbent Assay (ELISA)
2.5. Association Study and Statistical Analysis
3. Results
3.1. PVL Is Not Fully Correlated with Lymphoma Development
3.2. Association Study of BoLA-DRB3 with Lymphoma
3.3. Association Study of BoLA-DRB3 with PVL
3.4. Differential Susceptibility of BoLA-DRB3 Polymorphisms to Lymphoma and PVL
3.5. BoLA-DRB3 Polymorphisms Are Associated with anti-BLV Antibody Production Levels
4. Discussion
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Status | Asymptomatic (n = 250) | Lymphoma (n = 221) |
---|---|---|
Low proviral load 1 | 188 | 37 |
High proviral load 2 | 62 | 184 |
BoLA-DRB3 Allele | Asymptomatic (250 Cattle) | Lymphoma (221 Cattle) | OR | p-Value | p-Value Rank (I) | BH Value (I/Allele Number)*0.05 | Susceptibility |
---|---|---|---|---|---|---|---|
*001:01 | 70 | 70 | 1.156 | 0.463 | - | ||
*002:01 | 13 | 13 | 1.135 | 1.000 | - | ||
*006:01 | 3 | 3 | 1.132 | 1.000 | - | ||
*007:01 | 13 | 3 | 0.256 | 0.024 | 6 | 0.009 | - |
*009:02 | 19 | 4 | 0.231 | 0.005 | 5 | 0.008 | R |
*010:01 | 64 | 29 | 0.478 | 0.001 | 2 | 0.003 | R |
*011:01 | 111 | 61 | 0.561 | 0.001 | 2 | 0.003 | R |
*012:01 | 22 | 49 | 2.709 | 0.000 | 1 | 0.002 | S |
*014:01:01 | 44 | 23 | 0.569 | 0.042 | - | ||
*015:01 | 82 | 109 | 1.669 | 0.002 | 4 | 0.006 | S |
*016:01 | 14 | 17 | 1.389 | 0.578 | - | ||
*018:01 | 3 | 8 | 3.054 | 0.127 | - | ||
*027:03 | 31 | 31 | 1.141 | 0.693 | - |
BoLA-DRB3 Allele | Univariate | Multivariate | ||||||
---|---|---|---|---|---|---|---|---|
p-Value | OR | L95 | U95 | p-Value | OR | L95 1 | U95 2 | |
*009:02 | 0.002 | 0.10 | 0.02 | 0.43 | 4.27 × 10−4 | 0.07 | 0.01 | 0.30 |
*010:01 | 0.008 | 0.52 | 0.32 | 0.84 | 7.38 × 10−4 | 0.43 | 0.026 | 0.70 |
*011:01 | 9.91 × 10−4 | 0.53 | 0.36 | 0.77 | 5.77 × 10−6 | 0.40 | 0.27 | 0.59 |
*014:01:01 | 0.026 | 0.53 | 0.30 | 0.93 | 7.82 × 10−4 | 0.36 | 0.20 | 0.66 |
BoLA-DRB3 Genotype | Asymptomatic (212 Cattle) | Lymphoma (221 Cattle) | OR | p-Value | p-Value Rank (I) | BH Value (I/Genotype Number)*0.05 | Susceptibility |
---|---|---|---|---|---|---|---|
*001:01/*001:01 | 3 | 14 | 5.568 | 0.005 | - | ||
*001:01/*007:01 | 4 | 2 | 0.562 | 0.689 | - | ||
*001:01/*010:01 | 8 | 4 | 0.558 | 0.393 | - | ||
*001:01/*011:01 | 24 | 6 | 0.263 | 0.002 | 1 | 0.0005 | - |
*001:01/*012:01 | 3 | 5 | 1.906 | 0.483 | - | ||
*001:01/*014:01:01 | 7 | 1 | 0.158 | 0.393 | - | ||
*001:01/*015:01 | 9 | 10 | 1.269 | 0.645 | - | ||
*001:01/* 016:01 | 3 | 2 | 0.752 | 1.000 | - | ||
*001:01/*018:01 | 1 | 2 | 2.274 | 0.603 | - | ||
*001:01/*027:03 | 4 | 7 | 2.012 | 0.362 | - | ||
*002:01/*015:01 | 1 | 4 | 4.590 | 0.191 | - | ||
*005:03/*016:01 | 0 | 2 | - | 0.220 | - | ||
*007:01/*011:01 | 6 | 0 | 0 | 0.057 | - | ||
*009:02/*010:01 | 8 | 0 | - | 0.008 | - | ||
*010:01/*010:01 | 7 | 2 | 0.317 | 0.183 | - | ||
*010:01/*011:01 | 14 | 7 | 0.551 | 0.264 | - | ||
*010:01/*012:01 | 4 | 2 | 0.562 | 0.689 | - | ||
*010:01/*014:01:01 | 5 | 3 | 0.674 | 0.728 | - | ||
*010:01/*015:01 | 8 | 3 | 0.416 | 0.231 | - | ||
*011:01/*011:01 | 9 | 7 | 0.876 | 1.000 | - | ||
*011:01/*012:01 | 4 | 5 | 1.424 | 0.740 | - | ||
*011:01/*014:01:01 | 12 | 3 | 0.273 | 0.037 | - | ||
*011:01/*015:01 | 30 | 14 | 0.496 | 0.039 | - | ||
*011:01/*027:03 | 12 | 5 | 0.459 | 0.215 | - | ||
*012:01/*012:01 | 0 | 8 | - | 0.002 | 1 | 0.0005 | - |
*012:01/*014:01:01 | 3 | 2 | 0.752 | 1.000 | - | ||
*012:01/*015:01 | 5 | 15 | 3.568 | 0.011 | - | ||
*014:01:01/*015:01 | 4 | 1 | 0.280 | 0.377 | - | ||
*015:01/*015:01 | 7 | 18 | 3.078 | 0.013 | - | ||
*015:01/*016:01 | 2 | 3 | 1.706 | 0.669 | - | ||
*015:01/*027:03 | 2 | 10 | 5.877 | 0.016 | - |
BoLA-DRB3 Allele | Low PVL (317 Cattle) | High PVL (294 Cattle) | OR | p-Value | p-Value Rank (I) | BH Value (I/Genotype Number)*0.05 | Susceptibility |
---|---|---|---|---|---|---|---|
*001:01 | 100 | 99 | 1.8681 | 0.6046 | - | ||
*002:01 | 29 | 3 | 0.1458 | < 0.0001 | 1 | 0.0019 | R |
*007:01 | 11 | 12 | 1.5744 | 0.8322 | - | ||
*009:02 | 41 | 2 | 0.0685 | < 0.0001 | 1 | 0.0019 | R |
*010:01 | 62 | 66 | 1.7989 | 0.4262 | - | ||
*011:01 | 133 | 139 | 2.2967 | 0.1933 | - | ||
*012:01 | 28 | 64 | 3.8383 | < 0.0001 | 1 | 0.0019 | S |
*014:01:01 | 59 | 24 | 0.6068 | 0.0004 | 4 | 0.0077 | R |
*015:01 | 102 | 125 | 2.5463 | 0.0224 | 5 | 0.0096 | - |
*016:01 | 12 | 10 | 1.1962 | 0.8314 | - | ||
*018:01 | 1 | 7 | 9.968 | 0.0319 | - | ||
*027:03 | 39 | 29 | 1.1249 | 0.369 | - |
BoLA-DRB3 Allele | Univariate | Multivariate | ||||||
---|---|---|---|---|---|---|---|---|
p-Value | OR | L95 | U95 | p-Value | OR | L95 | U95 | |
*002:01 | 6.28 × 10−4 | 0.13 | 0.04 | 0.41 | 5.19 × 10−4 | 0.12 | 0.04 | 0.40 |
*009:02 | 3.29 × 10−5 | 0.05 | 0.01 | 0.20 | 1.42 × 10−5 | 0.04 | 0.01 | 0.17 |
*012:01 | 4.00 × 10−5 | 2.65 | 1.66 | 4.22 | 3.20 × 10−4 | 2.51 | 1.52 | 4.15 |
*014:01:01 | 2.40 × 10−4 | 0.39 | 0.23 | 0.64 | 2.10 × 10−5 | 0.31 | 0.18 | 0.53 |
BoLA-DRB3 Genotype | Low PVL (317 Cattle) | High PVL (294 Cattle) | OR | p-Value | p-Value Rank (I) | BH Value (I/Genotype Number)*0.05 | Susceptibility |
---|---|---|---|---|---|---|---|
*001:01/*001:01 | 4 | 13 | 3.6201 | 0.0245 | - | ||
*001:01/*002:01 | 10 | 0 | 0.0000 | 0.0019 | 3 | 0.0016 | - |
*001:01/*009:02 | 5 | 0 | 0.0000 | 0.0624 | - | ||
*001:01/*010:01 | 7 | 8 | 1.2388 | 0.7958 | - | ||
*001:01/*011:01 | 27 | 20 | 0.7840 | 0.4511 | - | ||
*001:01/*012:01 | 5 | 9 | 1.9705 | 0.2824 | - | ||
*001:01/*014:01:01 | 8 | 3 | 0.3982 | 0.2260 | - | ||
*001:01/*015:01 | 15 | 20 | 1.4696 | 0.2990 | - | ||
*001:01/*027:03 | 9 | 6 | 0.7130 | 0.6067 | - | ||
*002:01/*011:01 | 4 | 1 | 0.2671 | 0.3747 | - | ||
*007:01/*011:01 | 3 | 5 | 1.8108 | 0.4908 | - | ||
*007:01/*012:01 | 1 | 3 | 3.2577 | 0.3559 | - | ||
*009:02/*010:01 | 7 | 0 | 0.0000 | 0.0156 | - | ||
*009:02/*012:01 | 5 | 0 | 0.0000 | 0.0624 | - | ||
*009:02/*015:01 | 13 | 0 | 0.0000 | 0.0002 | 1 | 0.0005 | R |
*010:01/*010:01 | 7 | 5 | 0.7662 | 0.7741 | - | ||
*010:01/*011:01 | 9 | 24 | 3.0420 | 0.0039 | - | ||
*010:01/*012:01 | 3 | 4 | 1.4437 | 0.7160 | - | ||
*010:01/*014:01:01 | 4 | 1 | 0.2671 | 0.3747 | - | ||
*010:01/*015:01 | 8 | 10 | 1.3600 | 0.6341 | - | ||
*010:01/*016:01 | 3 | 2 | 0.7169 | 1.0000 | - | ||
*010:01/*027:03 | 3 | 3 | 1.0790 | 1.0000 | - | ||
*011:01/*011:01 | 17 | 11 | 0.6859 | 0.4393 | - | ||
*011:01/*012:01 | 3 | 18 | 6.8261 | 0.0005 | 2 | 0.0011 | S |
*011:01/*014:01:01 | 14 | 7 | 0.5279 | 0.1883 | - | ||
*011:01/*015:01 | 19 | 32 | 1.9156 | 0.0396 | - | ||
*011:01/*027:03 | 12 | 6 | 0.5295 | 0.2370 | - | ||
*012:01/*012:01 | 0 | 4 | - | 0.0530 | - | ||
*012:01/*014:01:01 | 6 | 2 | 0.3550 | 0.2886 | - | ||
*012:01/*015:01 | 2 | 12 | 6.7021 | 0.0053 | - | ||
*012:01/*027:03 | 2 | 4 | 2.1724 | 0.4351 | - | ||
*014:01:01/*015:01 | 18 | 6 | 0.3461 | 0.0223 | - | ||
*014:01:01/*027:03 | 3 | 2 | 0.7169 | 1.0000 | - | ||
*015:01/*015:01 | 6 | 19 | 3.5812 | 0.0067 | - | ||
*015:01/*016:01 | 3 | 2 | 0.7169 | 1.0000 | - | ||
*015:01/*027:03 | 3 | 4 | 1.4437 | 0.7160 | - |
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Lo, C.-W.; Borjigin, L.; Saito, S.; Fukunaga, K.; Saitou, E.; Okazaki, K.; Mizutani, T.; Wada, S.; Takeshima, S.-n.; Aida, Y. BoLA-DRB3 Polymorphism is Associated with Differential Susceptibility to Bovine Leukemia Virus-Induced Lymphoma and Proviral Load. Viruses 2020, 12, 352. https://doi.org/10.3390/v12030352
Lo C-W, Borjigin L, Saito S, Fukunaga K, Saitou E, Okazaki K, Mizutani T, Wada S, Takeshima S-n, Aida Y. BoLA-DRB3 Polymorphism is Associated with Differential Susceptibility to Bovine Leukemia Virus-Induced Lymphoma and Proviral Load. Viruses. 2020; 12(3):352. https://doi.org/10.3390/v12030352
Chicago/Turabian StyleLo, Chieh-Wen, Liushiqi Borjigin, Susumu Saito, Koya Fukunaga, Etsuko Saitou, Katsunori Okazaki, Tetsuya Mizutani, Satoshi Wada, Shin-nosuke Takeshima, and Yoko Aida. 2020. "BoLA-DRB3 Polymorphism is Associated with Differential Susceptibility to Bovine Leukemia Virus-Induced Lymphoma and Proviral Load" Viruses 12, no. 3: 352. https://doi.org/10.3390/v12030352
APA StyleLo, C. -W., Borjigin, L., Saito, S., Fukunaga, K., Saitou, E., Okazaki, K., Mizutani, T., Wada, S., Takeshima, S. -n., & Aida, Y. (2020). BoLA-DRB3 Polymorphism is Associated with Differential Susceptibility to Bovine Leukemia Virus-Induced Lymphoma and Proviral Load. Viruses, 12(3), 352. https://doi.org/10.3390/v12030352