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International Journal of Plant Biology is published by MDPI from Volume 13 Issue 1 (2022). Previous articles were published by another publisher in Open Access under a CC-BY (or CC-BY-NC-ND) licence, and they are hosted by MDPI on mdpi.com as a courtesy and upon agreement with PAGEPress.

Int. J. Plant Biol., Volume 3, Issue 1 (March 2012) – 9 articles

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696 KiB  
Article
GGE Biplot as a Novel Tool for the Investigation of Marigold (Tagetes erecta L.) Seedling Growth on Composted Corn Stalk as a Substrate
by Jianwei Hou, Guochen Yang, Lifei Chen and Chunli Zhao
Int. J. Plant Biol. 2012, 3(1), e8; https://doi.org/10.4081/pb.2012.e8 - 10 Dec 2012
Abstract
This project investigated the feasibility of using ground corn stalks as the substrate to cultivate marigold (Tagetes erecta L.). Five treatments including peat moss, composted corn stalks and freshly ground corn stalks were tested for their effects on marigold seedling growth. Seedling [...] Read more.
This project investigated the feasibility of using ground corn stalks as the substrate to cultivate marigold (Tagetes erecta L.). Five treatments including peat moss, composted corn stalks and freshly ground corn stalks were tested for their effects on marigold seedling growth. Seedling quality was described by several morphological and physiological parameters. Data were analyzed using analysis of variance and GGE biplot analysis. There were significant differences among the treatments for several growth parameters, such as seedling biomass, root biomass, stem diameter, leaf area, seedling vigor, chlorophyll content, photosynthetic rate, root activity, stomatal conductance, and intercellular CO2 concentration. Treatment T3, which contained composted ground corn stalks, had the best effect on marigold seedling growth. The results showed that corn stalk was a good substrate for marigold seedlings. GGE biplot demonstrated the substrate effects on marigold seedling quality, and graphically displayed the interrelationships among morphological and physiological parameters. T3 treatment was the best because four morphological parameters, including seedling biomass, roots biomass, stem diameter and seedling vigor, along with six physiological parameters fall into this sector. These results were consistent with the results analyzed by Statistical Analysis Software. For morphological parameters, the correlations are complicated. For physiological parameters, they were all positively correlated between each of two parameters. Full article
961 KiB  
Article
Optimization of Total RNA Isolation Method from the Aromatic Medicinal Plant Artemisia annua L.
by Suganthi Appalasamy, Ning Shu Ping, Arvind Bhatt, Ahmad Sofiman Othman, Nad-Ali Babaeian Jelodar and Chan Lai Keng
Int. J. Plant Biol. 2012, 3(1), e7; https://doi.org/10.4081/pb.2012.e7 - 10 Dec 2012
Cited by 1
Abstract
This paper is the first report on the development of a protocol that allows rapid and simplified extraction of total RNA from Artemisia annua L., an aromatic medicinal plant. This innovative protocol ensures a consistently high quantity and good quality of total RNA [...] Read more.
This paper is the first report on the development of a protocol that allows rapid and simplified extraction of total RNA from Artemisia annua L., an aromatic medicinal plant. This innovative protocol ensures a consistently high quantity and good quality of total RNA without any contamination of polyphenols, polysaccharides and proteins. The total RNA obtained is also free of fungal RNA even when extracted from fungal infested plants. The extraction buffer used in the proposed modified protocol was made up of non-hazardous chemicals. High concentrations of polyphenols of A. annua L. could be successfully eliminated and the prepared total RNA could be used for downstream reactions. Full article
793 KiB  
Article
In Vitro Cloning of Bambusa pallida Munro through Axillary Shoot Proliferation and Evaluation of Genetic Fidelity by Random Amplified Polymorphic DNA Markers
by Beena D.B. and Rathore T.S.
Int. J. Plant Biol. 2012, 3(1), e6; https://doi.org/10.4081/pb.2012.e6 - 10 Dec 2012
Cited by 6
Abstract
Multiple shoots emerged from the nodal shoot segments of the field-grown candidate plus clump explants of Bambusa pallida Munro when cultured on Murashige and Skoog (MS) liquid medium with additives (ascorbic acid 50 mg/L + citric acid 25 mg/L + cysteine 25 mg/L) [...] Read more.
Multiple shoots emerged from the nodal shoot segments of the field-grown candidate plus clump explants of Bambusa pallida Munro when cultured on Murashige and Skoog (MS) liquid medium with additives (ascorbic acid 50 mg/L + citric acid 25 mg/L + cysteine 25 mg/L) and combined use of α-naphthalene acetic acid (NAA) 1.34 μM + thiodiozuron 1.125 μM in a 2-week period. Further shoot multiplication was achieved in MS liquid medium with additives + NAA 1.34 μM + 6-benzylaminopurine 4.4 μM at 25 ± 2 °C and 33.78 μmol photons m−2 s−1 light illumination for a 12-h photoperiod. These shoots were rooted within four weeks in MS/2 basal salt medium with additives +2% sucrose +1% glucose, and 0.6% agar by pulse treatment of shoots with indole 3 butyric acid 0.5 mg/mL for 30 min prior to inoculation. Rooted plants were successfully hardened in the mist chamber. Survival rate during hardening was more than 95%. Micropropagated plants achieved a height of 25–30 cm with 3–4 tillers (shoots) with miniature rhizome in a 4-month period. Genetic stability was observed in the micropropagated plants. Full article
661 KiB  
Article
Distribution Pattern of Orchids in Uttarakhand, Western Himalayas, India
by Jeewan Singh Jalal
Int. J. Plant Biol. 2012, 3(1), e5; https://doi.org/10.4081/pb.2012.e5 - 6 Dec 2012
Cited by 4
Abstract
Orchids are widely distributed in tropics, subtropics and temperate regions. Within the tropics, orchids form an important feature of the vegetation, chiefly as epiphytes. India’s epiphytic orchid is to be found primarily in the Eastern Himalayas and Western Ghats, while the terrestrial species [...] Read more.
Orchids are widely distributed in tropics, subtropics and temperate regions. Within the tropics, orchids form an important feature of the vegetation, chiefly as epiphytes. India’s epiphytic orchid is to be found primarily in the Eastern Himalayas and Western Ghats, while the terrestrial species flourishes in the Western Himalayas. In the state of Uttarakhand, India, orchid distribution is not homogeneous. Orchids are typically concentrated along the riverine areas and in pockets of moist forests where there is suitable habitat for their growth, development and regeneration. The purpose of this study was to provide a general review of the distribution of orchid species (epiphytic and terrestrial) in Uttarakhand. A total of 240 species (of which 10 are endemic) belonging to 73 genera were recorded. The largest number of orchid species (terrestrial and epiphytic) were encountered in the sub-tropical zone (<1500 m). Terrestrial orchids were distributed throughout the altitudinal gradient, but the largest number of species occurred in two ecotones between high and low altitude forests (1500–2000 m and 3000–3500 m). Twenty-one species were restricted to a particular habitat. Full article
575 KiB  
Article
Rapid Separation of Seed Glucosinolates from Camelina sativa by Thin Layer Chromatography
by Roberto Russo and Remo Reggiani
Int. J. Plant Biol. 2012, 3(1), e4; https://doi.org/10.4081/pb.2012.e4 - 16 Oct 2012
Cited by 4
Abstract
A thin layer chromatography (TLC) method has been developed for the quantitative analysis of glucosinolates extracted from Camelina sativa. This procedure resolves the same long-chain glucosinolates as high-performance liquid chromatography but increases simultaneous sample size to 18. The TLC method saves time [...] Read more.
A thin layer chromatography (TLC) method has been developed for the quantitative analysis of glucosinolates extracted from Camelina sativa. This procedure resolves the same long-chain glucosinolates as high-performance liquid chromatography but increases simultaneous sample size to 18. The TLC method saves time and solvent, and can be applied to screening of Camelina. Full article
630 KiB  
Brief Report
Sample Preparation for Laser-Microdissection of Soybean Shoot Apical Meristem
by Chui E. Wong, Mohan B. Singh and Prem L. Bhalla
Int. J. Plant Biol. 2012, 3(1), e3; https://doi.org/10.4081/pb.2012.e3 - 16 Oct 2012
Cited by 1
Abstract
The shoot apical meristem houses stem cells responsible for the continuous formation of aerial plant organs including leaves and stems throughout the life of plants. Laser-microdissection in combination with high-throughput technology such as next generation sequencing permits an in-depth analysis of molecular events [...] Read more.
The shoot apical meristem houses stem cells responsible for the continuous formation of aerial plant organs including leaves and stems throughout the life of plants. Laser-microdissection in combination with high-throughput technology such as next generation sequencing permits an in-depth analysis of molecular events associated with specific cell type of interest. Sample preparation is the most critical step in ensuring good quality RNA to be extracted from samples following laser-microdissection. Here, we optimized the sample preparation for a major legume crop, soybean. We used Farmer’s solution as a fixative and paraffin as the embedding medium for soybean shoot apical meristem tissue without the use of any specialized equipment. Shorter time for tissue fixation (two days) was found to be critical for the preservation of RNA in soybean shoot apical meristem. We further demonstrated the utility of this method for different tissues derived from soybean and rice. The method outlined here shall facilitate studies on crop plants involving laser-microdissection. Full article
493 KiB  
Editorial
Field Guide to Trees of Southern Africa
by Braam Van Wyk, Keith Coates Palgrav and Piet Van Wyk
Int. J. Plant Biol. 2012, 3(1), br1; https://doi.org/10.4081/pb.2012.br1 - 4 Sep 2012
Cited by 41
Abstract
The mainland region of Africa is Southern Africa because it is considered to be robust with an estimate of around 1700 tree species that are native and a couple 100 more that are alien, but have become accustomed to the natural environment; invading, [...] Read more.
The mainland region of Africa is Southern Africa because it is considered to be robust with an estimate of around 1700 tree species that are native and a couple 100 more that are alien, but have become accustomed to the natural environment; invading, penetrating and replacing vegetation [...] Full article
548 KiB  
Article
Heat and Cold Stresses Phenotypes of Arabidopsis thaliana Calmodulin Mutants: Regulation of Gamma-Aminobutyric Acid Shunt Pathway under Temperature Stress
by Nisreen A. AL-Quraan, Robert D. Locy and Narendra K. Singh
Int. J. Plant Biol. 2012, 3(1), e2; https://doi.org/10.4081/pb.2012.e2 - 27 Apr 2012
Cited by 13
Abstract
Plants have evolved mechanisms to cope with changes in surrounding temperatures. T-DNA insertions in seven calmodulin genes of Arabidopsis thaliana were used to investigate the role of specific calmodulin isoforms in tolerance of plants to low and high temperature for seed germination, susceptibility [...] Read more.
Plants have evolved mechanisms to cope with changes in surrounding temperatures. T-DNA insertions in seven calmodulin genes of Arabidopsis thaliana were used to investigate the role of specific calmodulin isoforms in tolerance of plants to low and high temperature for seed germination, susceptibility to low and high temperature induced oxidative damage, and changes in the levels of gammaaminobutyric acid (GABA) shunt metabolites in response to temperature stress. Exposure of wild type (WT) and cam mutant seeds at 4 °C showed reduction in germination of cam5-4 and cam6-1 seeds. Exposure of cam seedlings to 42 °C for 2 h showed reduction in seed germination and survival of seedlings in cam5-4 and cam6-1 mutants compared to WT and other cam mutants. Oxidative damage by heat and cold stress measured as the level of malonaldehyde (MDA) was detected increased in root and shoot tissues of cam5-4 and cam6-1. Oxidative damage by heat measured as the level of MDA was detected in root and shoot of most cam mutants with highest levels in cam5-4 and cam6-1. Level of GABA shunt metabolites in seedlings were gradually increased after 1 h and 3 h with maximum level after 6 h and 12 h treatments at 4 °C. GABA shunt metabolites in both root and shoot were generally elevated after 30 min and 1 h treatment at 42 °C, and increased substantially after 2 h at 42 °C comparing to the control (no treatment). GABA and glutamate levels were increased significantly more than alanine in root and shoot tissues of all cam mutants and wild type compared to the control. Alanine levels showed significant decreases in all cam mutants and in WT for 30 and 60 min of heat stress. Sensitivity of cam5-4 and cam6-1 to low temperatures suggests a role of the CAM5 and CAM6 genes in seed germination and protection against cold induced oxidative damage. Increases in the level of GABA shunt metabolites in response to cold treatment after initial reduction in some cam mutants suggests a role for calmodulin protein (cam) in the activation of glutamate decarboxylase (GAD) after exposure to cold, while increased metabolite levels may indicate involvement of other factors like reduction in cytoplasmic pH in cold regulation. Initial general elevation in GABA shunt metabolites after 30 min heat treatment in cam mutants suggests regulation of GABA level by cam. These data suggest that regulation by factors other than cam is likely, and that this factor may relate to the regulation of GAD by intracellular pH and/or metabolite partitioning under heat stress. Full article
609 KiB  
Article
Frost-Acclimation of Photosynthesis in Overwintering Mediterranean Holm Oak, Grown in Central Europe
by Ellen Pflug and Wolfgang Brüggemann
Int. J. Plant Biol. 2012, 3(1), e1; https://doi.org/10.4081/pb.2012.e1 - 7 Mar 2012
Cited by 9
Abstract
As a consequence of global change, forestry in Central Europe has to expect and be prepared for an increase of hot and dry summers in the near future. In two model plantations of the Mediterranean holm oak (Quercus ilex L.) in Central [...] Read more.
As a consequence of global change, forestry in Central Europe has to expect and be prepared for an increase of hot and dry summers in the near future. In two model plantations of the Mediterranean holm oak (Quercus ilex L.) in Central Europe (Rhine-Main basin) we tested its potential as a future forestry tree for drought-threatened stands by studying its overwintering strategy under harsh winter conditions. During prolonged frost periods, chronic photoinhibition was developed, which lasted until the end of the frost period. Nearly all plants survived minimum temperatures of −16 to −18 °C and their photosynthetic apparatus recovered completely during late winter. A detailed study of the temperature dependence of chlorophyll (chl) fluorescence parameters of the OJIP test revealed statistically significant correlations between minimum temperature and maximum quantum yield of primary photochemistry (Fv/Fm), absorption rate/reaction centre (ABS/RC), dissipation rate/reaction centre (DI0/RC) and electron transport rate/reaction centre (ET0/RC) as well as with the deepoxidation state (DES) of the xanthophyll pigments. The DES correlated with Fv/Fm, ABS/RC, DI0/RC and ET0/RC. It is concluded, that from the point of view of the winter hardiness of the photosynthetic apparatus, Q. ilex should be further investigated as a potential future forestry tree also for very dry and warm stands in Central Europe under the scenarios of climate change. Full article
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