Impact of Molecular Symmetry/Asymmetry on Insulin-Sensitizing Treatments for Type 2 Diabetes
Abstract
:1. Introduction
2. Use of Symmetrical Compounds
2.1. Advantages of Molecular Symmetry
2.1.1. Low Toxicity and Good Antioxidant Activity
2.1.2. Affinity of Ligands for Their Receptors
2.2. Disadvantages of Molecular Symmetry
2.3. Symmetry: An Advantage or Disadvantage for Ligand-Receptor Interactions?
3. Use of Asymmetrical Molecules: Analogs and Derivatives
3.1. Advantages of Molecular Asymmetry
3.2. Disadvantages of Molecular Asymmetry
4. Theoretical Studies (In Silico) of Symmetrical and Asymmetrical Insulin Sensitizers
4.1. Design and Synthesis of Symmetrical and Asymmetrical Molecules
4.2. Structure-Related Physicochemical Properties and Pharmacokinetics
4.3. Prediction of Drug Targets
5. In Vitro Studies of Symmetrical and Asymmetrical Molecules
5.1. Activity of Thiazolidinediones on Different Cells
5.2. Effect of Biguanides on Different Cells
6. In Vivo Studies of Symmetrical and Asymmetrical Molecules
6.1. Symmetrical Compounds
6.2. Asymmetrical Compounds
6.3. Toxicity
6.4. Ex Vivo Studies of Symmetrical and Asymmetrical Molecules
7. Other Uses of Symmetrical and Asymmetrical Molecules
8. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Molecule Name | Solubility (mg/mL) | Reference | |||||
---|---|---|---|---|---|---|---|
DMSO | Ethanol | dH2O | Methanol | Acetone | Ethyl Acetate | ||
Symmetrical compound | |||||||
1G | 18.0 | 3.6 | 2.7 | NR | NR | NR | [1] |
Asymmetrical compound | |||||||
C40 | Good | NR | NR | Good | Good | Good | [26] |
Molecule | Receptors Involved in Docking | Docking Program/Hydrogen Bonds | Physico- Chemical Properties | Target Predictions | Toxico- Logical Predictions | Pharmaco- Kinetic Predictions | Reference |
---|---|---|---|---|---|---|---|
Symmetrical compound | |||||||
1G | PPARγ (2PRG) | AutoDock 4.2/5 H-bonds | Molinspiration and Osiris Property Explorer | SwissTarget- Prediction | ACD/Tox Suite and Osiris Property Explorer | NR | [1] |
Asymmetrical compounds | |||||||
1 | PPARα (1I7G) and PPARγ (1I7I) | AutoDock 4.2/3 H-bonds for PPARα and 4 for PPARγ | NR | NR | ACD/Tox Suite | NR | [31] |
5 | PPARγ (2PRG) | Molecular Operating Environment (MOE)/3 H-bonds | MOE and ADME-T | NR | ADME-T | ADME-T | [27] |
ChEMBL:259883, 1563849, 1599789, 1523092, 259883, 405972, and 1599789 | PPARγ (3K8S) and ALR2 (3RX3) | Glide Maestro 9.0 Schrödinger Suite and GOLD/5 H- bonds for PPARγ and 3 for ALR2 | QikProp 3.2 | TarFisDock, DRAR-CPI, and Pharm- Mapper, BindingDB, ChEMBL, and Specs | DEREK | QikProp 3.2 | [17] |
Lobeglitazone | PPARγ (1PRG) | AutoDock 4.0/ 4 H-bonds | NR | NR | NR | NR | [18] |
24 and 26 | PPARγ (4A4W and 2XKW) | GOLD 5.2/5 H-bonds for 24 and 26 | NR | SEA, PASS, and Pharm- Mapper | NR | NR | [28] |
13 and 16 | PTP1B (2NT7) | Glide 5.8 Schrödinger 2012/6 H- bonds for 13 and 16 | QikProp 3.5 | PASS | NR | QikProp 3.5 | [37] |
C40 | PPARγ (2PRG) | AutoDock 4.0/ 5 H-bonds | Molinspiration and Osiris Property Explorer | NR | Osiris Property Explorer | NR | [26] |
46 | PTP1B (2NT7) | Glide 5.8, Schrödinger 2012/5 H- bonds | QikProp 3.5 | NR | NR | QikProp 3.5 | [43] |
4b | PPARγ (P37231) | VLife MDS 4.3/2 H-bonds | NR | NR | NR | NR | [45] |
1 | PTP1B (1c83) | AutoDock 4.2/4 H-bonds | admetSAR | NR | admetSAR | admetSAR | [38] |
Tz21, Tz7, and Tz10 | PPARγ (1FM9) and α- glucosidase (2QMJ) | Maestro 9.0 Schrödinger suite /Regarding PPARγ, 4 H-bonds for Tz21 and 3 for Tz17 and Tz10 | Molins- piration | NR | NR | NR | [42] |
11n, 11o, and 22a | α-glucosidase (homology modeling) | MOE 2016.0208/ 2 H-bonds for 11o and 4 for 22a | NR | NR | NR | NR | [41] |
7m | IKK-β (3QA8) | Glide Maestro Schrödinger suite/ 3 H-bonds | NR | NR | NR | NR | [39] |
17 | PTP1B (2QB5) | AutoDock 4.2/ 6 H-bonds | pkCSM | NR | ProTox | pkCSM | [44] |
5 and 9 | PPARγ (2PRG) and α-amy-lase (2QV4) | MOE 2019/ Regarding PPARγ, 1 H-bond for 5 and 9; Regarding α- amylase, 1 H-bond for 5 and 4 for 9 | admetSAR | NR | admetSAR ADME-Tox | admetSAR ADME-Tox | [40] |
4 and 5 | PPARγ (2PRG) and α-amylase (2QV4) | MOE 2019/ Regarding α- amylase, 1 H-bond for 4 and 2 for 5 | NR | NR | NR | NR | [46] |
Structure | Number of Reactions | Total Synthesis Time | Yield (%) | Reference |
---|---|---|---|---|
Symmetrical compound | ||||
1 | 3 h | 83.0 | [1] | |
Asymmetrical compounds | ||||
2 | 3–4 h | 80.0 | [31] | |
5 | 6 h | 70.0 | [27] | |
3 | 48.2 h | 58.4 for 13 and 68.4 for 16 | [37] | |
1 | 2 h | 90.6 | [26] | |
4 | 15.45 h | 67.6 | [45] | |
5 | 104.15 h | 56.0 | [38] | |
5 | 58.5 h | 69.0 for Tz21 and Tz7, and 67.0 for Tz10 | [42] | |
4 | 24 h | 59.9 | [41] | |
7 | 50.5 | 52.0 | [39] | |
3 | 25 h | 45.0 | [44] | |
5 | 8 h | 71.0 for 6 and 73.0 for 11 | [40] | |
| 5 | 9 h | 74.0 for 4, 65.0 for 5, 61.0 for 6, and 58.0 for 7 | [46] |
Compound | Duration of Treatment | Cells or Assays | Control Treatment | Aim | Effectiveness | Reference |
---|---|---|---|---|---|---|
1 | 24 h | 3T3-L1 fibroblasts | Cells without treatment | Relative expression of mRNA | mRNA of PPARγ (5-fold), PPARα (6-fold), and LUT-4 (3-fold) | [31] |
Lobeglitazone | Assay | Kinase assay | ROSI | Comparison of blocking phosphorylation | Better inhibition of phosphorylation. | [18] |
1 | Assay | Inhibition assay | NR | Inhibition of PTP1B | 85% inhibition at 20 µM | [38] |
Tz21 | Assay | Inhibition assay | Acarbose | Inhibition of α-glucosidase | 0.21 µM | [42] |
5 | Assay | DPPH assay | Ascorbic acid | Antioxidant activity | ∼10% decrease | [27] |
13 and 16 | Assay | Inhibition assay | Suramin at 9.76 µM | Inhibition of PTP1B | 7.31 and 8.13 µM | [37] |
Molecule Name/Dosage | Duration of Treatment | Model/Dosage | Control Treatment/ Dosage | Higher Effectiveness? | Reference |
---|---|---|---|---|---|
Symmetrical compound | |||||
1G at 35.7 mg/kg/day | 2 w | STZ rat model at 45 mg/kg | PIO (Agopar®) at 30 mg/kg/day | Yes | [1] |
Asymmetrical compounds | |||||
1 at 50 mg/kg/ single dose | - | STZ (at 65 mg/kg) and NIC (at 110 mg/kg) rat model | Glibenclamide at 5 mg/kg | Yes | [31] |
Tz21 at 36 mg/kg | 4 h | STZ (60 mg/kg) rat model | PIO at 36 mg/kg | Yes | [42] |
C40 and C81 at 18 and 21 mg/kg/day, respectively | 3 w | STZ (at 45 mg/kg) rat model | PIO (Agopar®) at 30 mg/kg/day | Yes | [2] |
5 at 50 mg/kg | 4 d | Alloxan (100 mg/kg) rat model | Metformin at 500 mg/kg | Yes | [27] |
4b (NR) | 8 d | Alloxan (120 mg/kg) rat model | PIO at 40 mg/kg | Similar | [45] |
16 (NR) | 1 w | Alloxan (185 mg/kg) albino mouse model | PIO (NR) | Similar | [37] |
Study | Molecule Name/Control Treatment | Effectiveness | Reference |
---|---|---|---|
Symmetrical compound | |||
Blood glucose and triacylglyceride levels | 1G/PIO (Agopar®) | Similar effect | [1] |
Asymmetrical compounds | |||
Blood glucose level | 1/glibenclamide | Similar effect | [31] |
Blood glucose level | 5/metformin | Lesser effect | [27] |
Serum glucose, cholesterol, TAG, LDL level | 4b/PIO | Similar effects (only a minor effect for TAG) | [45] |
Levels of blood glucose, TAG, cholesterol, and antioxidant molecules (SOD and GSH) | C40/PIO (Agopar®) | Greater effect | [2] |
Application | Findings | Model | Reference |
---|---|---|---|
Thiazolidinediones | |||
Insulin sensitizer | A dose of <45 mg per day lowered the level of edema as well as the rate of weight gain and heart failure. However, it was not possible to reduce the risk of fractures. | Insulin resistance intervention after a stroke (IRIS) trial in humans | [93] |
Cardioprotective agent PIO | The cardioprotective activity of PIO may owe itself to the depleted level of collagenase III in plasma. | Clinical trials | [94] |
Anticancer, antiaging | PIO and ROSI presented good affinity for NAF-1 and could be linked to anticancer and anti-aging activity. Additionally, ROSI moderately inhibit complex I of the mitochondrial chain. | Human hepatocellular carcinoma (HepG2) cells overexpressing NAF-1 and complex I. | [20] |
Antihyperglycemic, α-amylase inhibitors, antioxidants, and antihyperlipidemic agents | Some TZD derivatives were able to inhibit α-amylase more effectively than acarbose. They showed a great capacity for scavenging free radicals (better than vitamin C), leading to a decrease in blood glucose and an antihyperlipidemic effect. | Alloxan-induced diabetes in male Wistar rats. The inhibition of α-amylase was measured in vitro. The DPPH assay revealed antioxidant capacity. | [40] |
Anti-inflammatory agents, anticonvulsants and antidepressants | TZDs reduced the expression of microglial and inflammatory cytokines and chemokines in the brain. Likewise, they lowered the level of proinflammatory transcription factors in the CNS. TZDs were capable of inhibiting COX-2, an essential enzyme in the inflammatory cascade. They also activated PPARγ, causing a decline in the amount of TNFα and iNOS. This diminished inflammatory damage and improved the cognitive abilities of patients with Alzheimer’s. The antidepressant and anticonvulsant effects were better than the standard drug. | Parkinson’s produced by 1-methyl-4-phenyl-1,2,3,6 tetrahydropyridine (MPTP) in mice, in other animal models, and in cells. | [95] |
Antimalarial | TZDs displayed moderate activity against the growth of P. falciparum and weakly inhibited FP-2. Although addition of halogen or electron-withdrawing groups significantly increased the inhibition of the FP-2 enzyme, there was no decrease in whole-cell activity. Hence, the compounds were evaluated with liver microsomes, resulting in rapid degradation, which suggests their metabolic instability. | In vitro inhibition of cysteine protease falcipain-2 (FP-2), whole cells of Plasmodium falciparum and hepatic microsomes from human, rat, and mouse liver. | [96] |
Anticancer | In some cell lines, TZDs induced apoptosis by inter-nucleosomal DNA fragmentation. Similarly, they inhibited the growth of some adenocarcinomas. TZDs also lowered the level of endotrophin, a vital substance in cancer cells. Additionally, cytotoxic and cytostatic effects have been detected, perhaps due to the repression of human telomerase reverse transcriptase (hTERT). | HL-60 and U937 human myeloid leukemia cells; human alveolar basal epithelial adenocarcinoma A549; human chronic myelogenous leukemia K562; MCF-7 human breast adenocarcinoma; human acute lymphoblastic leukemia MOLT-4; and H1299 cells. | [97] |
Antioxidant and antigout | TZDs inhibited xanthine oxidase, a metallo-flavoprotein overexpressed in gout, and produced greater levels of reactive oxygen species. | For in vitro tests, the enzyme xanthine oxidase was obtained from rat liver. The antioxidant capacity was measured by the DPPH radical assay. | [98] |
Antimicrobial | TZDs with methoxy, fluoro, chloro, and bromo groups helped improve antimicrobial activity by increasing specificity, evidenced by the lack of cytotoxicity for cell lines. | The minimum inhibitory concentration was quantified in vitro with gram-positive bacteria (Staphylococcus aureus, Bacillus cereus, Bacillus subtilis, Listeria monocytogenes, and Micrococcus luteus) and Gram-negative bacteria (Pseudomonas fluorescens, aeruginosa, Escherichia coli, Salmonella typhi, and Flavobacterium devorans). Cytotoxicity was assessed in HeLa and MCF-7 cells. | [99,100] |
Biguanides | |||
Several types of cancer treatment | Activation of LKB1 and AMPK and inhibition of mTOR activity, inhibition of protein synthesis, cell cycle arrest, triggering of apoptosis and autophagy by p53 and p21, respectively, lowering of blood insulin levels, inhibition of UPR, activation of the immune system, destruction of cancer stem cells, prevention of angiogenesis, and decreased hyperlipidemia. | Clinical trials in non-diabetic patients | [90,101] |
Neurodegenerative diseases | AMPK activation via metformin was neuroprotective against Aβ. According to other in vitro studies, metformin reduced phosphorylation through signaling by mTOR/PP2A (protein phosphates 2A) and produced a lesser degree of molecular pathologies associated with Alzheimer’s disease. In rodent Parkinson’s disease models, dietary metformin diminished oxidative phosphorylation by inhibiting complex I in mitochondria and by inhibiting gluconeogenesis, which further aided neurons to decrease their oxidative burden by minimizing the utilization of NADH. The mTOR pathway links several biological pathways underlying neurodegenerative diseases, and metformin inhibited this signaling cascade. | In vitro studies, mouse models, and clinical trials with diabetic and non-diabetic patients | [21] |
Acute kidney diseases | Metformin protected renal tubular cells from inflammation, apoptosis, ROS, endoplasmic reticulum stress, and epithelial mesenchymal transition via AMPK activation. Additionally, it inhibited cystic fibrosis transmembrane conductance regulator (CFTR)-mediated fluid secretion and the mTOR-induced cyst formation negatively regulated by AMPK in autosomal dominant polycystic kidney disease. For diabetic patients with kidney diseases, however, clinical investigations have shown an insignificant, even detrimental, effect of metformin. | In vitro studies, animal models, and clinical trials | [102] |
Obesity-induced inflammation | Short-term metformin treatment led to greater cytokine levels in hepatocytes, including IL-1 , TNF-α, IL-6, MCP-1, and IFN-α, as well as a higher concentration of IL-1 and IL-6 in a hepatocyte culture medium. Metformin decreased the phosphorylation of c-JNK-1 and the level of fat deposition. In hepatocytes, it diminished the level of pro-inflammatory cytokines, increased AMPK phosphorylation, and reduced fat deposition after long-term treatment. | Obese mice | [6] |
Non-alcoholic fatty liver disease (NAFLD) | Metformin lowered hepatocyte triglyceride accumulation triggered by hyperglycemia and hyperinsulinemia. It reduced ApoA5 expression. Metformin-induced down-regulation of ApoA5 was associated with enhanced phosphorylation of cellular AMPK, a metabolite-sensing protein kinase, and LXR. Metformin also decreased the expression of stearyl-coenzyme A desaturase 1 (SCD1), which participates in lipid de novo synthesis and catalyzes saturated fatty acids to form monounsaturated fatty acids. Animal and in vitro models were used. | HepG2 cell line and hepatocytes from obese mice | [6] |
Polycystic ovary syndrome (PCOS) | Metformin elicited ovulation. It diminished hyperandrogenism through its effect on both the ovary and adrenal gland by suppressing androgen production. This in turn lowered the level of the pituitary luteinizing hormone and increased the generation of sex hormones and their binding with globulin in the liver. There was a decline in ovarian cytochrome P450c17-α activity. | Non-diabetic and diabetic patients, both obese and lean | [103,104] |
Dyslipidemia | Metformin decreased the mRNA expression of sterol regulatory element-binding protein 1, ACC1, and ApoA-IV (involved in the secretion of chylomicrons). | Diabetic patients | [6] |
Modulation of gut microbiota | A 30-day treatment with metformin significantly modified the expression of 46 gut microbes. After the diversity of the gut microbiota was significantly reduced in mice with diet-induced obesity, and Akkermansia spp. was introduced into their gut, glucose homeostasis improved. | Healthy and obese mice | [6] |
Antihypertensive effects | Metformin inhibited angiotensin II-induced ER stress by means of AMPK activation. | Diabetic patients | [6] |
Cardiovascular Protective Effects | Metformin protected against cardiac ischemia reperfusion injury by activating AMPK, which promoted glycolysis and protected myocyte viability through the closure of the mitochondrial permeability transition pore (PTP), preventing it from opening and rupturing. This effect was mediated by greater phosphorylation of eNOS, resulting in nitric oxide production. Metformin has also been observed to reduce post-ischemia myocardial injury by restoring depleted PGC-1 levels and enhancing in mitochondrial biogenesis. | Clinical trials | [6] |
Anti-aging | Metformin is involved in the activation of AMPK and the inhibition of signaling through the mTOR pathway. Signaling via mTOR is associated with accelerated aging. AMPK is a key regulator of many cellular pathways linked to both health and lifespan, including the beneficial effects of calorie restriction. | In vitro studies, animal models, and clinical trials | [105] |
Molecule | Structure | Application | Findings | Reference |
---|---|---|---|---|
Proguanil | Prophylactic antimalarial drug | Both drugs inhibit dihydrofolate reductase, an enzyme involved in the reproduction of the malaria parasites Plasmodium falciparum and Plasmodium vivax in red blood cells. | [108] | |
Chlorpro- guanil | Clinical trials for the treatment of malaria |
Molecule | Structure | Origin | Findings | Reference |
---|---|---|---|---|
Dendrimers (Polypropylene amine, PAMAM, pseudorotaxane, ethylene diamine, etc.) | | Synthetic | Analogous to proteins, enzymes and viruses. Delivers anticancer drugs. Delivers genes. Forms part of contrast agents in magnetic resonance imaging. Serves as a sensor. Enhances solubility. Participates in photodynamic therapy. Dendrimers and other molecules can either be attached to the periphery or encapsulated in their interior voids. Modern medicine uses a variety of these molecules as artificial blood substitutes (e.g., PAMAM dendrimers). Drug–dendrimer conjugates show high solubility, reduced systemic toxicity, and selective accumulation in solid tumors. | [109] |
Polyamines synthesized as potential small molecule CXCR4 antagonists | Fragment-¡-Linker-¡- Fragment Fragment = Linker | Synthetic | Antagonist that blocks the entry of human immunodeficiency virus type 1 (HIV-1). | [110] |
Thioureas | Synthetic | Antioxidant activity that scavenges ABTS, and antibacterial activity against Agrobacterium tumefaction. | [12] | |
Proteins | Synthetic | The redesign of existing proteins may result in enhanced functions. Energy minimization is achieved by symmetrical assemblies. | [111] | |
Steroid dimers | Synthetic | Improvement of biological potential leads to antiproliferative activity in human cell lines of cervical cancer (HeLa), breast cancers (MDA-MB-453 and MDA-MB-361), and leukemia (K562), with values ranging from 14.9 to 27.1 μM (values for cisplatin ranged from 2.1 to 17.1 μM). Dimeric compounds exhibited antifungal activity against Saccharomyces cerevisiae. | [112] | |
Sceptrin | Natural product | Antibacterial, antiviral, antihistaminic, and antimuscarinic agent, and possibly beneficial in treating coronavirus disease (COVID). | [8,113,114] | |
Complanadine A | Natural product | Treatment for Alzheimer’s disease or spinal cord injury. | [8,115] | |
G3F | Synthetic | Antifungal and antidiabetic activity. Docking results show that the lowest energy value is for α-amylase and α-glucosidase. In vitro studies with these two enzymes yielded IC50 values of 22.8 and 21 µg/mL, respectively. | [11] | |
5g | Synthetic | α-Glucosidase and α-amylase inhibitors. Electron attracting substituents on the aromatic ring favor inhibition. | [19] | |
Dendro fullerenes | Synthetic | Antiviral. Fullerene is able to fit inside the hydrophobic cavity of HIV proteases, inhibiting the access of substrates to the catalytic site of the enzyme. If exposed to light, fullerene produces singlet oxygen with high quantum yields. This activity, together with direct electron transfer from the excited state of fullerene and DNA bases, can be used to cleave DNA. | [30] |
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Filisola-Villaseñor, J.G.; Aranda-Barradas, M.E.; Miranda-Castro, S.P.; Mendieta-Wejebe, J.E.; Valdez Guerrero, A.S.; Guillen Castro, S.A.; Martínez Castillo, M.; Tamay-Cach, F.; Álvarez-Almazán, S. Impact of Molecular Symmetry/Asymmetry on Insulin-Sensitizing Treatments for Type 2 Diabetes. Symmetry 2022, 14, 1240. https://doi.org/10.3390/sym14061240
Filisola-Villaseñor JG, Aranda-Barradas ME, Miranda-Castro SP, Mendieta-Wejebe JE, Valdez Guerrero AS, Guillen Castro SA, Martínez Castillo M, Tamay-Cach F, Álvarez-Almazán S. Impact of Molecular Symmetry/Asymmetry on Insulin-Sensitizing Treatments for Type 2 Diabetes. Symmetry. 2022; 14(6):1240. https://doi.org/10.3390/sym14061240
Chicago/Turabian StyleFilisola-Villaseñor, Jessica Georgina, María E. Aranda-Barradas, Susana Patricia Miranda-Castro, Jessica Elena Mendieta-Wejebe, Amaranta Sarai Valdez Guerrero, Selene Amasis Guillen Castro, Macario Martínez Castillo, Feliciano Tamay-Cach, and Samuel Álvarez-Almazán. 2022. "Impact of Molecular Symmetry/Asymmetry on Insulin-Sensitizing Treatments for Type 2 Diabetes" Symmetry 14, no. 6: 1240. https://doi.org/10.3390/sym14061240
APA StyleFilisola-Villaseñor, J. G., Aranda-Barradas, M. E., Miranda-Castro, S. P., Mendieta-Wejebe, J. E., Valdez Guerrero, A. S., Guillen Castro, S. A., Martínez Castillo, M., Tamay-Cach, F., & Álvarez-Almazán, S. (2022). Impact of Molecular Symmetry/Asymmetry on Insulin-Sensitizing Treatments for Type 2 Diabetes. Symmetry, 14(6), 1240. https://doi.org/10.3390/sym14061240