Next Article in Journal
The Mechanism of Damage to the Midgut by Low Concentration of Bacillus thuringiensis in the Silkworm, Bombyx mori
Previous Article in Journal
Toxicity of Eight Insecticides on Drosophila suzukii and Its Pupal Parasitoid Trichopria drosophilae
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Article

Blue Vane and Pan Traps Are More Effective for Profiling Multiple Facets of Bee Diversity in Subtropical Forests

1
College of Life Sciences, Anhui Normal University, 1 Beijing East Road, Jinghu District, Wuhu 241000, China
2
Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China
3
Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, 4 Renmin South Road, Wuhou District, Chengdu 610041, China
4
Key Laboratory of Ecological Restoration Biodiversity Conservation of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, 4 Renmin South Road, Wuhou District, Chengdu 610041, China
5
State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
6
Characteristic Laboratory of Forensic Science in Universities of Shandong Province, Shandong University of Political Science and Law, Jinan 250014, China
7
Institute of Agro-Products Processing, Xueyun Road, Kunming 650221, China
8
College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
9
Zhejiang Qianjiangyuan Forest Biodiversity National Observation and Research Station, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
10
China National Botanical Garden, Beijing 100093, China
11
International College, University of Chinese Academy of Sciences, Yuquan Road, Shijingshan District, Beijing 100049, China
*
Authors to whom correspondence should be addressed.
Insects 2024, 15(11), 909; https://doi.org/10.3390/insects15110909
Submission received: 29 September 2024 / Revised: 14 November 2024 / Accepted: 19 November 2024 / Published: 20 November 2024
(This article belongs to the Section Insect Ecology, Diversity and Conservation)

Simple Summary

Little attention has been paid to the efficiency of trap types in capturing bees across taxonomic and functional groups, nor their suitability under varying environmental conditions. Our study evaluated the efficiency, bias, and complementarity of four trap types: yellow, white, and blue pan traps, and blue vane traps for pollinator monitoring in monoculture and mixed forests. We found that bias in trap types was not only detected in taxonomic but also in functional groups. Differences in bee taxonomic, phylogenetic, and functional diversity were also observed, with blue pan traps yielding the highest species richness and phylogenetic diversity, while blue vane traps captured the highest functional richness. When considering the complementarity of different traps, the combination of blue pan and vane traps outperformed the other two-method combinations. Notably, the bias in trap types was most pronounced in mixed forests.

Abstract

The choice of trap in entomological surveys affects the composition of captured insects, though previous comparative studies have been limited in the types of composition measured, and the effects of environmental context. We assessed the sampling bias of several traps commonly used in pollinator monitoring: blue, yellow, and white pan traps, and blue vane traps, towards different taxonomic and functional groups and their efficiency in measuring taxonomic, phylogenetic, and functional diversity. Analyses were performed in monoculture and mixed forests to understand the environmental context of trap efficiency. We found that blue pan traps generally outperformed other types in bee capture and exhibited a preference for Halictidae bees. Blue pan traps yielded the highest species richness and phylogenetic diversity, while blue vane traps captured the highest functional richness. Bias differences were frequently detected in mixed forests compared with monoculture forests. We also found the combination of blue vane and pan traps consistently correlated highest with a complete survey among two-method combinations. Based on our findings, we recommend a combination of blue vane and pan traps to obtain a more comprehensive bee collection in an efficient manner. Additionally, it is crucial to consider habitat type when designing bee trapping protocols to ensure an accurate representation of bee communities.

Graphical Abstract

1. Introduction

Bees, particularly wild bees, are one of the most important pollinators of plants [1,2,3], contributing more to pollination efficiency than other flower-visiting animals [1,4,5]. However, bees are highly sensitive to environmental changes [6,7,8] and have experienced significant declines in the past decades due to habitat loss and fragmentation, land use intensification, climate change, pathogens, and pesticides [9,10,11,12]. Understanding how bees respond to various stressors is essential for developing effective conservation policies and for management, to ensure the long-term stability of ecosystems [13,14,15]. To achieve accurate and reliable results and reduce the incidence of bias, it is crucial to employ sampling methods that are accurate, practical, and repeatable [16,17,18]. Accurate assessments of bee diversity are an important foundation for effective conservation and management.
Bee sampling methods can be classified as active and passive [17,18]. Active methods are mostly ‘seek and collect’ by observers, and take place in a given area and period [19]. In contrast, passive traps are left in a target area for a given period and accumulate captured insects over time (e.g., Malaise, pan and vane traps) [20]. There are strengths and weaknesses of passive and active collection methods [17,18]. The efficiency of activate methods, particularly sweep netting, depends on the experience and professionalism of collectors [21]. For instance, O’Connor et al. (2019) found that sweep-netters with greater taxonomic expertise could produce equivalent species accumulation data as those obtained from pan traps [21]. The efficiency of collection by sweep netting is also affected by topography, which is frequently heterogeneous and complex in forests [22]. Passive methods, including vane traps, colored pan traps, and Malaise traps, have been widely used for collecting flying insects in various habitats, including wild bees [14,23,24]. Vane and pan traps attract bees by imitating the color and shape of flowers, and they are relatively inexpensive and labor-efficient compared to active methods. Malaise traps are flight interceptors and more suited to long-term monitoring, though they come at a considerable price, their establishment is laborious and the proportion of bees amongst flying insects captured is lower than other trap options [25,26]. Passive traps can be more versatile, as they can be applied in various environments and avoid collector bias. However, passive traps nonetheless have a preference for certain taxa [27]. For example, stronger-flying bees are known to escape from pan traps [28], while vane traps capture a higher proportion of larger-bodied bees [29].
Comparisons of insect trapping methods have primarily focused on single measurements of diversity, usually species richness and composition [30,31,32,33]. However, this may ignore the preferential attraction of the sampling method to different taxonomic and functional groups [27,34,35]. Such biases can be significant, given that traits, including body size, diet breadth, and proboscis length, play important roles in biodiversity maintenance and ecosystem functions [36,37], and mediate various behaviors. Any sampling bias in these types of traits might obscure environmental effects on bee community composition. Furthermore, it remains unclear whether capture bias is reflected in commonly used diversity indices. Most comparisons of trap types consider only species richness [38,39], frequently also used to elucidate community diversity in response to environmental changes [40,41]. However, phylogenetic diversity has gained importance in biodiversity conservation [42] because it captures the uniqueness of lineages and reveals various ecological pressures via a more nuanced description of community structure [43,44,45]. Moreover, functional diversity has been shown to be more sensitive to environmental changes than species richness. For example, the decrease in functionality was greater than what would be expected based solely on the reduction in species richness due to the preferential loss of functionally distinct species [46]. Therefore, incorporating these three dimensions of diversity—taxonomic diversity, phylogenetic diversity, and functional diversity—can provide a more comprehensive understanding of observed patterns in diversity.
The methodology used in comparing sampling methods has often overlooked scale and context [33,47], as it has been shown that traps do not perform consistently across habitats [48,49]. For example, a comparison of several trap types found efficiency varied across habitats, with blue pan traps being more effective in natural sites than in orchards, while an opposing trend was observed for yellow pan traps [50]. Similarly, bees caught in pan traps have been found to decrease with increasing competition in floral resources [30], whereas blue vane traps proved effective even with intense competition for floral resources [51]. However, only limited attention has been given to sampling methods for bees in forests, a critically important hotspot of biodiversity [52]. Furthermore, no comparative analyses have been carried out across forest diversity gradients, a variable that accounts for considerable variance in primary productivity and maintenance of forest-associated biodiversity [53,54,55].
Here, we addressed these gaps by comparing the attractiveness of various trap types to bees with respect to taxonomic and functional groups and across different forest diversity levels. Additionally, we compared three dimensions of diversity (taxonomic, phylogenetic, and functional diversity) yielded by different trap types. We hypothesized that (i) different trap types differed in their bias in specific taxonomic and functional groups, (ii) such bias is revealed by diversity variation, and (iii) the sampling bias across trap types changes in different forest habitats.

2. Materials and Methods

2.1. Study Area, Bee Collection, and Processing

The study was conducted at the Biodiversity-Ecosystem Functioning (BEF) experiment located in Jiangxi Province, southeast China (29°080–29°110 N, 117°900–117°930 E, Figure S1) [56]. This experiment comprises two sites that were established in 2009 and 2010. The climate is subtropical with a mean annual temperature of 16.7 °C and mean annual precipitation of 1821 mm [57]. Our study included a total of 58 plots from sites A and B, including 28 monoculture plots with one tree species per plot and 30 plots with two or more tree species per plot.
The traps (colored blue, yellow, and white) were selected for bee collection in our study because they have been proven to be efficient in collecting a wide variety of bees in other ecosystems [27,38,58]. In each plot, we established two sets of blue vane traps and three-colored (yellow, blue, and white) pan traps, arranged diagonally (Figure S2). This configuration resulted in a total of eight traps per plot. Across all 58 plots, we placed 464 traps for each sampling day. To minimize biases resulting from trap placement within each plot, we adopted a systematic approach rather than random selection. The placement of each trap inside the plot was in a fixed arrangement with blue vane traps placed in the northwest and southeast direction, and pan traps placed in the northeast and southwest direction. Additionally, the plots were randomly located in the forests, which helped to ensure that any bias associated with fixed trap placement within a plot would be mitigated by the variable environmental conditions and microhabitats encountered across forest plots. The traps were uniformly positioned in the understory with blue vane traps suspended at a height of 1 m, and the pan traps positioned at a height of 0.5 m (Figure S2), taking into consideration the dense vegetation in the understory of some plots. Bees were collected during three periods widely known for bee activity and flowering: June (summer) and September (early autumn) of 2022, and April (spring) of 2023 to minimize the differences in bee activity that might be caused by seasonal variation. Sampling was conducted every 24 h, three times per sampling event, resulting in 9 sampling days in total. All the samples were stored in 99.9% ethanol in the field. In the lab, bees were sorted and then the specimens were pinned. The pinned bees were subsequently morphologically examined. At a minimum, 5 specimens from each morphospecies were randomly selected, and their mid-right legs were carefully extracted for molecular work [59].
COI barcodes were obtained following the pipeline described by Liu et al. (2017), including four main steps: DNA extraction, PCR amplification, molecular delimitation, and taxonomic assignments [59]. The DNA was extracted by TIANGEN Guide Smart DNA extraction kits (TIANGEN BIOTECH Beijing Co., Ltd., Beijing, China) and sequencing was conducted at Beijing Tianyi Huiyuan Biotechnology Co., Ltd. (Beijing, China). Haplotypes were inferred using Mothur v1.40.3 [60] and then molecular species level delimitation conducted with five tools: Mothur v1.40.3 [60], CD-Hit v4.8.1 [61], bPTP v0.51 [62], the Vsearch v2.13.3 ‘cluster_fast’ function [63], and Blastclust v2.2.12. Molecular Operational Taxonomic Units (MOTUs) were assigned taxonomic names with the software SAP v1.9.9 [64], using reference DNA barcodes downloaded from the BOLD system at https://www.boldsystems.org/ (accessed on 8 April 2022) [65]; Taxonomic assignment was conducted using the command ‘--assignment ConstrainedNJ’ with the minimum identity set as 0.92 (‘--minidentity 0.92’). Specimen taxonomic identities were also confirmed via morphological inspection with the help of taxonomists, ensuring identification at least to the genus level. Species names were finalized considering both the molecular assignment and morphological identification. Frequently, a single species exhibited multiple COI sequences due to genetic variation. To streamline our analytical approach, we used the most prevalent sequences for each species to proceed with subsequent analyses. This selection included the construction of a phylogeny and the calculation of phylogenetic diversity indices, ensuring that our findings were based on the most robust and representative genetic data.

2.2. Bee Functional Traits

We selected three life-history traits (parasitism, sociality, and nesting location; for further details on trait categories, see Table S1), and four morphological traits (inter-tegular distance, head width, forewing length, and body length), which are thought to be related to capabilities of obtaining pollen and sensitivity to environmental changes [14,66,67,68,69,70,71,72,73]. The life-history traits were obtained using the pipeline described in [74]. The pipeline was used to predict states for the set of 63 queries, using a phylogeny-based model of 2391 reference species and 3812 trait records. The reference phylogeny used in trait modeling was taken from the Insect Phylogeny synthesis hub at https://insectphylo.org/, accessed on 6 November 2023 [75]. The morphological traits were measured using a Zeiss Discovery V20 stereomicroscope (ZEISS AG, Oberkochen, Germany).

2.3. Statistical Analyses

To investigate the potential biases and visualize the distribution of bee species across trap types, taxonomic trees were plotted using the ‘metacoder’ package in R v4.3.3 [76]. Furthermore, to understand how sampling methods were biased with respect to functional traits, we compared the attractiveness to different functional traits. Specifically, we employed Chi-square tests to evaluate the associations between trap types and categorical traits (life-history traits: sociality, parasitism, and nesting location) and plotted results in R package ‘ggstatsplot’ with function ‘ggbarstats’ [77]. Additionally, we used one-tailed Wilcoxon tests with Benjamini–Hochberg (BH) adjustment [78] to compare the attractiveness of different trap types with continuous traits [79].
To test whether the bias was consistent with variation in diversity, we conducted a one-tailed pairwise Wilcoxon test with BH adjustment [79], comparing bee alpha diversity across the four trap types. Indices for three dimensions of diversity (species richness: taxonomic diversity, TD; Faith’s phylogenetic diversity: phylogenetic diversity, PD; and functional richness: functional diversity, FD) were calculated by using R package ‘vegan’ [80], ‘picante’ [81], and ‘FD’ [82], respectively. TD evaluates the count of unique species within the community [83], PD quantifies diversity by summing the length of branches between members on a phylogenetic tree [42], and FD measures the functional space (e.g., the range between the maximum and minimum value in the case of a single trait [84,85]) occupied by the community [86]. FD was evaluated based on four morphological and three life-history traits. The dimensionality of four newly measured traits was reduced through principal coordinate analysis (PCoA), using the first principal components to represent bee body size in the R function ‘pcoa’ from the R ‘ape’ package [87]. Due to the life-history traits used being categorical, a distance matrix that contained the functional distance for each pair of species was calculated according to ‘gower’ distance [88] in R package ‘FD’ with function ‘gowdis’ [82]. These diversity indices were calculated for each plot per month, treating different sampling events in different months as replicates. Due to inconsistency in success in attracting bees, not all traps within a given plot contained observations. As a result, the number of plots with the presence of bees differed across trap types. To maintain consistency in the level of sampling and ensure paired comparisons, the number of plots was kept equal to that of the more efficient trap types and we only omitted from analysis those plots where no bees were captured by any of the four traps.
To estimate completeness across sampling units, we performed a sample-size-based rarefaction and extrapolation sampling curve. The Hill diversity metric (q = 0) was computed to examine differences in three dimensions of diversity (TD, PD, and FD) in the R package ‘iNEXT.3D’ [89]. Given the preliminary analysis indicating limitations when using individual traps, we further investigated combinations of trap types to determine which are more likely to yield bee communities similar to those collected in a comprehensive survey. To evaluate dissimilarities between trap types and the complete survey, we employed the Mantel statistics for matrix correlations in the R package ‘vegan’ [80]. The Mantel test was performed by matrix rank correlations based on Spearman’s correlation coefficient with 999 permutations. In order to investigate whether different habitats would affect the sampling efficiency of trap types in the forests, all the analyses were conducted separately based on data obtained from monoculture or mixed plots (note, the mixed forests included plots with two or more tree species). In addition, we tested the overall sampling efficiency across all levels of tree diversity (named all forests hereafter).

3. Results

A total of 3993 bee specimens were collected and 1237 barcodes were obtained after sorting plot samples into morphospecies. The clustering tool CD-Hit v4.8.1 showed the most consistent results and thus the MOTUs resulting from this were used in further analyses. After morphological assessment, we found bees belonging to 5 families, 12 genera, and 63 species, with the most abundant family being Halictidae (Table S2). In monoculture forests, 2230 specimens were obtained (4 families, 11 genera, and 57 species), while in mixed forests, 1763 specimens were collected (5 families, 12 genera, and 52 species).
The four trap types exhibited no significant differences in capturing bees from Colletidae, Andrenidae, and Megachilidae. However, blue pan traps exhibited a higher attraction for Halictidae bees compared to blue vane traps, while the latter showed a greater attractiveness to Apidae bees than three-colored pan traps (Figure 1a and Figure S3a). The bee preferences of different trap types were not consistent across forest diversity levels. For example, in mixed forests, blue vane traps captured more Apidae bees than blue pan traps, while there was no significant difference in monoculture forests (Figure 1b,c and Figure S3b,c).
The bees captured by blue vane traps were significantly larger in size compared to those trapped by three-colored pan traps (p < 0.01), with no significant difference in ITD observed among three-colored pan traps (p > 0.05, Figure 2). Approximately 6% were cleptoparasitic bees, 31% were above-ground nesters, and 12% were eusocial bees. The probability of collecting parasitic bees was found to be independent of trap types (Figure S4), while all traps were more effective in capturing bees that nested underground than aboveground (Figure S5). There was a correlation between trap type and sociality, but such a correlation was not observed in monoculture forests (Figure S6).
Blue pan traps yielded the highest species richness and phylogenetic diversity (p < 0.01), followed by blue vane traps (p < 0.05), while blue vane traps captured the highest functional richness (p < 0.01), with blue pan traps a close second (p < 0.01; Table 1). However, the efficiency varied in monoculture and mixed forests. In monoculture forests, the advantage of blue vane traps in terms of functional richness vanished compared with blue pan traps (p > 0.05; Table S6; Figure S7h). Similarly, the superiority of blue vane traps over yellow pan traps was not detected in the monoculture forests if considering species richness (p > 0.05; Table S6; Figure S7b).
The sampling coverage completeness for all three facets of bee diversity was consistently greater than 0.95 for each trap type (Figure S8). Blue pan traps achieved the highest degree of completeness (sample coverage index = 0.98), while the white pan traps yielded the lowest (sample coverage index = 0.95). The sampling coverage index varied between monoculture and mixed forests.
Each trap showed specific unique biases towards taxonomic or functional groups, and also displayed distinct diversity profiles. This raised the question of whether the traps can complement each other in capturing a more comprehensive spectrum of bee diversity. To test this, we computed the Mantel statistical analysis, which indicated that different combinations of trap types could yield a concordance ranging from 0.84 to 0.99, relative to the complete survey. In general, combinations of three trap types performed better in matching the complete survey than combinations of two trap types, with one exception (three-colored pan traps, as shown in Figure S9). In terms of combinations of two trap types, the combination of the blue vane and pan traps demonstrated a very high concordance with the complete data set (rM > 0.93, p < 0.05). Among three-method combinations, the combination of blue vane, blue pan, and yellow pan traps yielded nearly perfect concordance against the complete survey with a correlation coefficient exceeding 0.98 (Figure S9). The results of the correlation analyses differed for some combinations in different forests. For instance, the correlation calculated by yellow and white pan traps differed a lot in different forest diversity levels (monoculture forests: rM = 0.88 and mixed forests: rM = 0.78; p < 0.05).

4. Discussion

We used four passive traps to capture wild bees and compared their taxonomic and functional bias, as well as their efficiency in three facets of diversity across different forest types. Our results indicated bias both in terms of taxonomy and function across four trap types. Blue pan traps yielded the highest taxonomic (quantified by species richness) and phylogenetic diversity (assessed via Faith’s phylogenetic diversity index), while functional diversity (measured by functional richness) captured by blue vane traps was the highest. We also examined the complementarity among different trap types and discovered that the combinations of blue vane, blue pan, and yellow pan traps yielded the most comprehensive community against complete sampling. Notably, the performance of each trap depended on the forest type.

4.1. Effectiveness of Different Trap Types

In our assessments of bias and diversity capture, blue pan traps were found to be more efficient in evaluating bee diversity, with blue vane traps a close second in most cases. This is consistent with some previous comparisons. The color blue, which has a relatively short wavelength, has long been known to be discernable by various Hymenoptera [33,90,91,92]. However, blue pan traps captured more bees than blue vane traps, in contrast with the finding of previous findings [18,47]. In our study, three-colored pan traps were simultaneously set up and positioned a distance from blue vane traps, in each plot. Therefore, the overall attractiveness of three-colored pan traps might contribute to drawing more bees into the area [93], potentially enhancing the efficiency of the blue pan traps. In addition, there were variations in elevation between the pan and vane trap types, which could have inadvertently introduced bias into the composition of bee species captured, although our traps were consistently positioned at the suitable height for bee capture in the understory providing a consistent basis for comparison. Consequently, we suggest that future research take into account the height at which traps are set.

4.2. Effectiveness in Different Forest Diversity Levels

Our study revealed that the effectiveness of trap types varied across forest diversity levels, with the most pronounced differences observed in mixed forests. These differences were evident not only in the biases towards specific taxonomic and functional groups but also in the overall diversity captured. The rarefaction curve results also confirmed the differential sampling completeness achieved by the traps in different forests. Previous findings showed that tree diversity was positively associated with a diversity of understory herbs [40], indicating that mixed forests may accommodate a more complex understory structure and microclimate condition [94,95]. The complex structure in mixed forests might amplify the bias of trap types, thereby influencing effectiveness. However, the mechanism of how complex environmental conditions influence the sampling efficiency of trap types is unclear. We suggest that further research is needed to elucidate the underlying mechanisms governing the differences in trap bias and efficiency across various habitats, such as the level of tree species diversity.

4.3. Bias and Complementarity Among Trap Types

Previous studies have focused only on the comparisons between trap types, while ignoring bias and complementarity [21,26,27]. The rarefaction curve analysis indicated that our sampling efforts were sufficient and adequate to reflect total species diversity. Despite this, we observed significant biases in taxonomic and functional group composition among most trap types, and such bias could result in different community compositions. For instance, Lasioglossum species were predominantly captured in pan traps, as noted in previous studies [39,96]. Similarly, Ceratina species were attracted by blue vane traps, in agreement with the results of Campbell et al. (2023) [47]. These preferences indicate that trap types will inherently attract specific bee species, a phenomenon also observed in studies of other arthropods, particularly ants and spiders [32,49]. Our findings, consistent with those of O’Connor et al. (2019) [21] and Chamorro et al. (2022) [30], indicate that reliance on a single trapping method might lead to biases towards specific taxonomic and functional groups, thereby failing to provide a comprehensive representation of the bee community. Importantly, our findings also found that all trap types used were capable of capturing species that remained undetected by alternative traps, highlighting the value of employing multiple trap types to mitigate biases and gain a more accurate assessment of community composition. However, it should be noted that due to their high efficiency and complementarity, passive traps must be used carefully to prevent localized extirpation [97].
Given the incomplete capture of bee communities by any single trap type, we further investigated the efficiency of various combinations of trap types to explore complementarity effects. Surprisingly, the combinations of blue vane and pan traps consistently outperformed other two-method and one three-method combinations, in terms of community composition. The most effective two-method combination included the two most efficient trap types identified in our study. This means that these two traps often captured different bees from different phylogenetic clades and with different traits, and thus, would complement each other. We also examined the effectiveness of three-method combinations. The concordance to complete the survey was generally improved with the addition of trap types, except when the three-colored pan traps were used in combination.
Contrary to the widely held belief that three-colored pan traps are complementary for collecting and monitoring arthropod diversity, particularly bees [58], our study found that the most effective combination for capturing bee communities was the use of blue vane, blue pan, and yellow pan traps. This combination achieved the highest correlation with a complete survey. Giles and Ascher (2006) found that species richness of fast and highflying species such as Megachile, Colletes, and Melissodes, produced by ground-level pan traps was generally low [98]. One possible explanation for this was that larger-bodied bees with strong flying abilities were able to escape from the shallow trapping matrix of the pan traps [99]. Our study supported this observation, as blue vane traps, which were effective at capturing larger bees and exhibited higher functional diversity compared to other trap types. The incorporation of blue vane traps helped to compensate for the shortfall in capturing specific species of pan traps, thereby enriching the functional diversity of the bee community captured in the forests. Another possibility might be the complexity of forest structures that the abundant flowers there might lead to potential competition with traps. For instance, the efficiency of pan traps decreased with the increased floral resources due to the competition between florals and traps [21,30].

4.4. Taxonomic, Phylogenetic, and Functional Diversity

The comprehensive capture of bee communities is crucial for the foundation of effective management and conservation programs. In this study, we evaluated not only taxonomic, but also phylogenetic and functional diversity among four trap types to compare the effectiveness of each trap type. It has been shown that sampling methods are biased in terms of functional traits for some arthropods, which was also detected here [27,31]. However, it is important to recognize that the functional traits we focused on might only reveal select ecological functions, potentially overlooking other traits with other ecological functions. For this reason, it is important to incorporate phylogeny into analyses, as phylogenetic diversity has long been invaluable in deciphering ecological forces acting on communities, due to its capability to capture aspects of niche use [43,44,45].
The comparisons among different trap types differed across three dimensions of diversity indices, which emphasizes the importance of involving various dimensions of diversity to accurately assess the effectiveness of various trap types. Interestingly, our results showed that greater taxonomic and phylogenetic diversity was not always correlated with higher functional diversity. For instance, while blue pan traps showed the highest levels of taxonomic and phylogenetic diversity, it was the blue vane traps that yielded the highest functional diversity. This could be explained by the dominant genus captured in blue pan traps, Lasioglossum, which tended to be morphologically similar and explore similar resources with each other taxon belonging to this genus. These bees observed in our study were characterized by small body size, nesting below ground, and solitary behavior, consistent with our findings that pan traps exhibited a preference for specific functional groups. Despite the high taxonomic diversity, the prevalence of such similar traits resulted in a lower level of functional diversity.

5. Conclusions

Overall, our results highlighted the importance of conducting surveys with diverse trap types to characterize bee fauna. For our sub-tropical forest type, we found that blue vane and pan traps were an efficient combination for bee sampling. Unexpectedly, the combination of three trap types—blue vane, blue pan, and yellow pan traps—yielded a more comprehensive fauna than any of the two-method or three-method combinations. Our findings also emphasized that it was important to include multiple dimensions of diversity, such as taxonomic, phylogenetic, and functional aspects. The comprehensive diversity indices provided a more nuanced picture of community structure and a deeper understanding of composition shifts. The bias to different groups was mostly amplified in mixed forests and the efficiency of trap types varied with tree diversity, indicating the importance of considering habitat types when selecting trapping strategies for bee diversity surveys. Unfortunately, the exact mechanisms of how forest diversity levels affected the sampling bias and effectiveness remained unclear. It also remains unclear whether the efficiency across different traps varied throughout the day, and if so, which potential environmental factors might influence the performance of traps. Furthermore, it would be informative to investigate how seasonal changes in bee activity affect the efficiency of traps. In conclusion, our findings are invaluable for performing an effective and long-term monitoring of bee diversity in the forest. This, in turn, is the basis for a more effective management of bees.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/insects15110909/s1, Figure S1: The location of BEF-China experiment; Figure S2: (a) Blue vane traps were hung from wooden sticks at a height of approximately 1 m, and (b) three-colored pan traps were positioned by metal bracket at a height of 0.5 m; Figure S3: Pairwise comparisons of bee abundance and composition among (a) all forests (monoculture and mixed plots), (b) monoculture forests and, (c) mixed forests; Figure S4: Parasitism distribution of bees captured by four trap types in (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests; Figure S5: Nesting location distribution of bees captured by four trap types in (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests; Figure S6: Sociality of bees captured by four trap types in (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests; Figure S7: Comparisons of three facets of bee diversity across four trap types in all forests (monoculture and mixed plots, 1st column), monoculture forests (2nd column), and mixed forests (3rd column). Diversity was estimated for (ac) TD; (df) PD, and (gi) FD; Figure S8: Coverage-based rarefaction (solid lines) and extrapolation (dotted lines) of bees captured by four trap types, with 95% unconditional confidence intervals (shading) in all forests (monoculture and mixed plots, 1st column), monoculture forests (2nd column), and mixed forests (3rd column); Figure S9: Mantel correlation coefficients (rM) between the faunal similarity matrix based on different combinations and the complete survey; Table S1: Life-history trait descriptions; Table S2: Taxonomic information for specimen collected different forest types (tree diversity level); Table S3: Results of Shapiro-Wilk test of normality and Bartlett test of homogeneity of variances for comparisons of inter-tegular distance (ITD); Table S4: Results of Shapiro-Wilk test of normality and Bartlett test of homogeneity of variances for comparisons of taxonomic, phylogenetic and functional diversity; Table S5: Comparisons of inter-tegular distance (ITD) across different forest types (tree diversity level) obtained from one-tailed pairwise Wilcoxon test; Table S6: Comparisons of three facets of bee diversity in monoculture forests obtained from one-tailed pairwise Wilcoxon test; Table S7: Comparisons of three facets of bee diversity in mixed forests obtained from one-tailed pairwise Wilcoxon test.

Author Contributions

Conceptualization, D.C.; formal analysis, T.-T.X.; funding acquisition, J.-S.H. and D.C.; investigation, T.-T.X. and D.Z.; methodology, T.-T.X., M.-Q.W. and Y.L.; project administration, C.-D.Z.; resources, Z.-Q.N., F.Y., X.-W.L. and K.-P.M.; supervision, J.-S.H. and D.C.; writing—original draft, T.-T.X.; writing—review and editing, M.-Q.W., Y.L., C.-Y.S., Q.-S.Z. and D.C. All authors have read and agreed to the published version of the manuscript.

Funding

This work was supported by grants (No. 32250610207) from the National Science Foundation of China and (No. 2020FSB0001) from CAS President’s International Fellowship Initiative (PIFI) to D.C.; a grant (No. 41972029) from National Science Foundation of China to J.S.H; and Sino BON Insect Diversity Monitoring Network (Sino BON-Insect).

Data Availability Statement

The data presented in this study are available on request from the corresponding author due to we are using some information from this database for other publications.

Acknowledgments

We sincerely thank Huijie Qiao, Michael Staab, and Andreas Schuldt for statistical advice. Also, we appreciate text suggestions by Helge Bruelheide. We thank local assistants for their help in the field sampling.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Ollerton, J.; Winfree, R.; Tarrant, S. How many flowering plants are pollinated by animals? Oikos 2011, 120, 321–326. [Google Scholar] [CrossRef]
  2. Kevan, P.G.; Baker, H.G. Insects as flower visitors and pollinators. Annu. Rev. Entomol. 1983, 28, 407–453. [Google Scholar] [CrossRef]
  3. Cardinal, S.; Danforth, B.N. Bees diversified in the age of eudicots. Proc. R. Soc. B Biol. Sci. 2013, 280, 20122686. [Google Scholar] [CrossRef]
  4. Klein, A.-M.; Vaissière, B.E.; Cane, J.H.; Steffan-Dewenter, I.; Cunningham, S.A.; Kremen, C.; Tscharntke, T. Importance of pollinators in changing landscapes for world crops. Proc. R. Soc. B Biol. Sci. 2007, 274, 303–313. [Google Scholar] [CrossRef] [PubMed]
  5. James, L.H.; Michael, D.U.; Scott, H. Conserving pollinators in north American forests: A review. Nat. Areas J. 2016, 36, 427–439. [Google Scholar] [CrossRef]
  6. Tscharntke, T.; Sekercioglu, C.H.; Dietsch, T.V.; Sodhi, N.S.; Hoehn, P.; Tylianakis, J.M. Landscape constraints on functional diversity of birds and insects in tropical agroecosystems. Ecology 2008, 89, 944–951. [Google Scholar] [CrossRef]
  7. Bartomeus, I.; Ascher, J.S.; Gibbs, J.; Danforth, B.N.; Wagner, D.L.; Hedtke, S.M.; Winfree, R. Historical changes in northeastern US bee pollinators related to shared ecological traits. Proc. Natl. Acad. Sci. USA 2013, 110, 4656–4660. [Google Scholar] [CrossRef] [PubMed]
  8. Burkle, L.A.; Marlin, J.C.; Knight, T.M. Plant-pollinator interactions over 120 years: Loss of species, co-occurrence, and function. Science 2013, 339, 1611–1615. [Google Scholar] [CrossRef]
  9. Winfree, R.; Aguilar, R.; Vázquez, D.P.; LeBuhn, G.; Aizen, M.A. A meta-analysis of bees’ responses to anthropogenic disturbance. Ecology 2009, 90, 2068–2076. [Google Scholar] [CrossRef]
  10. Williams, N.M.; Hemberger, J. Climate, pesticides, and landcover drive declines of the western bumble bee. Proc. Natl. Acad. Sci. USA 2023, 120, e2221692120. [Google Scholar] [CrossRef]
  11. Ulyshen, M.; Horn, S. Declines of bees and butterflies over 15 years in a forested landscape. Curr. Biol. 2023, 33, 1346–1350.e3. [Google Scholar] [CrossRef] [PubMed]
  12. Potts, S.G.; Biesmeijer, J.C.; Kremen, C.; Neumann, P.; Schweiger, O.; Kunin, W.E. Global pollinator declines: Trends, impacts and drivers. Trends Ecol. Evol. 2010, 25, 345–353. [Google Scholar] [CrossRef] [PubMed]
  13. Biesmeijer, J.C.; Roberts, S.P.M.; Reemer, M.; Ohlemüller, R.; Edwards, M.; Peeters, T.; Schaffers, A.P.; Potts, S.G.; Kleukers, R.; Thomas, C.D.; et al. Parallel declines in pollinators and insect-pollinated plants in Britain and the Netherlands. Science 2006, 313, 351–354. [Google Scholar] [CrossRef] [PubMed]
  14. Hall, M.; Nimmo, D.; Cunningham, S.; Walker, K.; Bennett, A. The response of wild bees to tree cover and rural land use is mediated by species’ traits. Biol. Conserv. 2019, 231, 1–12. [Google Scholar] [CrossRef]
  15. Guerra, C.A.; Bardgett, R.D.; Caon, L.; Crowther, T.W.; Delgado-Baquerizo, M.; Montanarella, L.; Navarro, L.M.; Orgiazzi, A.; Singh, B.K.; Tedersoo, L.; et al. Tracking, targeting, and conserving soil biodiversity. Science 2021, 371, 239–241. [Google Scholar] [CrossRef]
  16. Lindenmayer, D.B.; Likens, G.E. The science and application of ecological monitoring. Biol. Conserv. 2010, 143, 1317–1328. [Google Scholar] [CrossRef]
  17. Prado, S.G.; Ngo, H.T.; Florez, J.A.; Collazo, J.A. Sampling bees in tropical forests and agroecosystems: A review. J. Insect Conserv. 2017, 21, 753–770. [Google Scholar] [CrossRef]
  18. Prendergast, K.S.; Menz, M.H.M.; Dixon, K.W.; Bateman, P.W. The relative performance of sampling methods for native bees: An empirical test and review of the literature. Ecosphere 2020, 11, e03076. [Google Scholar] [CrossRef]
  19. James, H.C.; Linda, J.K.; Robert, M. Sensitivity of systematic net sampling for detecting shifting patterns of incidence and abundance in a floral guild of bees at Larrea tridentata. J. Kans. Entomol. Soc. 2013, 86, 171–180. [Google Scholar] [CrossRef]
  20. Wilson, J.S.; Jahner, J.P.; Starley, L.; Calvin, C.L.; Ikerd, H.; Griswold, T. Sampling bee communities using pan traps: Alternative methods increase sample size. J. Insect Conserv. 2016, 20, 919–922. [Google Scholar] [CrossRef]
  21. O’Connor, R.S.; Kunin, W.E.; Garratt, M.P.D.; Potts, S.G.; Roy, H.E.; Andrews, C.; Jones, C.M.; Peyton, J.M.; Savage, J.; Harvey, M.C.; et al. Monitoring insect pollinators and flower visitation: The effectiveness and feasibility of different survey methods. Methods Ecol. Evol. 2019, 10, 2129–2140. [Google Scholar] [CrossRef]
  22. Doane, T.H.; Edmonds, D.; Yanites, B.J.; Lewis, Q. Topographic roughness on forested hillslopes: A theoretical approach for quantifying hillslope sediment flux from tree throw. Geophys. Res. Lett. 2021, 48, e2021GL094987. [Google Scholar] [CrossRef]
  23. Romey, W.L.; Ascher, J.S.; Powell, D.A.; Yanek, M. Impacts of logging on midsummer diversity of native bees (Apoidea) in a northern hardwood forest. J. Kans. Entomol. Soc. 2007, 80, 327–338. [Google Scholar] [CrossRef]
  24. Nelson, C.J.; Frost, C.M.; Nielsen, S.E. Narrow anthropogenic linear corridors increase the abundance, diversity, and movement of bees in boreal forests. For. Ecol. Manag. 2021, 489, 119044. [Google Scholar] [CrossRef]
  25. Thomas, M.; Sheikh, A. Malaise trap and insect sampling: Mini review. Biol. Bull. 2016, 2, 35–40. [Google Scholar]
  26. Campbell, J.W.; Hanula, J.L. Efficiency of Malaise traps and colored pan traps for collecting flower visiting insects from three forested ecosystems. J. Insect Conserv. 2007, 11, 399–408. [Google Scholar] [CrossRef]
  27. Pei, C.K.; Hovick, T.J.; Duquette, C.A.; Limb, R.F.; Harmon, J.P.; Geaumont, B.A. Two common bee-sampling methods reflect different assemblages of the bee (Hymenoptera: Apoidea) community in mixed-grass prairie systems and are dependent on surrounding floral resource availability. J. Insect Conserv. 2021, 26, 69–83. [Google Scholar] [CrossRef]
  28. Portman, Z.M.; Bruninga-Socolar, B.; Cariveau, D.P.; Morrison, W. The state of bee monitoring in the United States: A call to refocus away from bowl traps and towards more effective methods. Ann. Entomol. Soc. Am. 2020, 113, 337–342. [Google Scholar] [CrossRef]
  29. Geroff, R.K.; Gibbs, J.; McCravy, K.W. Assessing bee (Hymenoptera: Apoidea) diversity of an Illinois restored tallgrass prairie: Methodology and conservation considerations. J. Insect Conserv. 2014, 18, 951–964. [Google Scholar] [CrossRef]
  30. Chamorro, F.J.; Faria, C.M.A.; Araújo, F.S.; Freitas, B.M. Elevated pan traps optimise the sampling of bees, including when the availability of floral resources is high. Insect Conserv. Divers. 2022, 16, 16–32. [Google Scholar] [CrossRef]
  31. Salata, S.; Kalarus, K.; Borowiec, L.; Trichas, A.; Kujawa, K. How estimated ant diversity is biased by the sampling method? A case study of Crete: A Mediterranean biodiversity hotspot. Biodivers. Conserv. 2020, 29, 3031–3050. [Google Scholar] [CrossRef]
  32. Zhang, C.-J.; Cheng, Y.-T.; Luo, X.-S.; Chen, Y.; He, Y.-C.; Li, Y.-P.; Huang, Z.-P.; Scott, M.B.; Xiao, W. Quantifying ant diversity and community in a subalpine forest mosaic: A comparison of two methods. J. Insect Conserv. 2023, 27, 813–824. [Google Scholar] [CrossRef]
  33. Acharya, R.S.; Burke, J.M.; Leslie, T.; Loftin, K.; Joshi, N.K. Wild bees respond differently to sampling traps with vanes of different colors and light reflectivity in a livestock pasture ecosystem. Sci. Rep. 2022, 12, 9783. [Google Scholar] [CrossRef] [PubMed]
  34. Cane, J.H.; Minckley, R.L.; Kervin, L.J. Sampling bees (Hymenoptera: Apiformes) for pollinator community studies: Pitfalls of pan-trapping. J. Kans. Entomol. Soc. 2000, 73, 225–231. [Google Scholar]
  35. Leong, J.M.; Thorp, R.W. Colour-coded sampling: The pan trap colour preferences of oligolectic and nonoligolectic bees associated with a vernal pool plant. Ecol. Entomol. 1999, 24, 329–335. [Google Scholar] [CrossRef]
  36. Chase, M.H.; Fraterrigo, J.M.; Harmon-Threatt, A. Bee functional traits and their relationship to pollination services depend on many factors: A meta-regression analysis. Insect Conserv. Divers. 2023, 16, 313–323. [Google Scholar] [CrossRef]
  37. Shimizu, A.; Dohzono, I.; Nakaji, M.; Roff, D.A.; Miller, D.G., III; Osato, S.; Yajima, T.; Niitsu, S.; Utsugi, N.; Sugawara, T.; et al. Fine-tuned bee-flower coevolutionary state hidden within multiple pollination interactions. Sci. Rep. 2014, 4, 3988. [Google Scholar] [CrossRef]
  38. Joshi, N.K.; Leslie, T.; Rajotte, E.G.; Kammerer, M.A.; Otieno, M.; Biddinger, D.J. Comparative trapping efficiency to characterize bee abundance, diversity, and community composition in apple orchards. Ann. Entomol. Soc. Am. 2015, 108, 785–799. [Google Scholar] [CrossRef]
  39. Droege, S.A.M.; Tepedino, V.J.; Lebuhn, G.; Link, W.; Minckley, R.L.; Chen, Q.; Conrad, C. Spatial patterns of bee captures in North American bowl trapping surveys. Insect Conserv. Divers. 2010, 3, 15–23. [Google Scholar] [CrossRef]
  40. Cheng, J.-H.; Shi, X.-J.; Fan, P.-R.; Zhou, X.-B.; Sheng, J.-D.; Zhang, Y.-M. Relationship of species diversity between overstory trees and understory herbs along the environmental gradients in the Tianshan Wild Fruit Forests, Northwest China. J. Arid Land 2020, 12, 618–629. [Google Scholar] [CrossRef]
  41. Bukovinszky, T.; Verheijen, J.; Zwerver, S.; Klop, E.; Biesmeijer, J.C.; Wäckers, F.L.; Prins, H.H.T.; Kleijn, D. Exploring the relationships between landscape complexity, wild bee species richness and reproduction, and pollination services along a complexity gradient in the Netherlands. Biol. Conserv. 2017, 214, 312–319. [Google Scholar] [CrossRef]
  42. Faith, D.P. Conservation evaluation and phylogenetic diversity. Biol. Conserv. 1992, 61, 1–10. [Google Scholar] [CrossRef]
  43. Ives, A.R.; Helmus, M.R. Generalized linear mixed models for phylogenetic analyses of community structure. Ecol. Monogr. 2011, 81, 511–525. [Google Scholar] [CrossRef]
  44. Harmon-Threatt, A.N.; Ackerly, D.D. Filtering across spatial scales: Phylogeny, biogeography and community structure in bumble bees. PLoS ONE 2013, 8, e60446. [Google Scholar] [CrossRef] [PubMed]
  45. Hendrix, S.D.; Forbes, A.A.; MacDougall, C.E.D. Variation in the phylogenetic diversity of wild bees at produce farms and prairies. Agric. Ecosyst. Environ. 2018, 259, 168–173. [Google Scholar] [CrossRef]
  46. Flynn, D.F.B.; Gogol-Prokurat, M.; Nogeire, T.; Molinari, N.; Richers, B.T.; Lin, B.B.; Simpson, N.; Mayfield, M.M.; DeClerck, F. Loss of functional diversity under land use intensification across multiple taxa. Ecol. Lett. 2009, 12, 22–33. [Google Scholar] [CrossRef]
  47. Campbell, J.W.; Abbate, A.; West, N.M.; Straub, L.; Williams, G.R. Comparing three collection methods for pollinating insects within electric transmission rights-of-ways. J. Ins. Conserv. 2023, 27, 377–387. [Google Scholar] [CrossRef]
  48. Missa, O.; Basset, Y.; Alonso, A.; Miller, S.E.; Curletti, G.; De Meyer, M.; Eardley, C.; Mansell, M.W.; Wagner, T. Monitoring arthropods in a tropical landscape: Relative effects of sampling methods and habitat types on trap catches. J. Insect Conserv. 2008, 13, 103–118. [Google Scholar] [CrossRef]
  49. Ernst, C.M.; Loboda, S.; Buddle, C.M.; Dytham, C.; Bolger, T. Capturing northern biodiversity: Diversity of arctic, subarctic and north boreal beetles and spiders are affected by trap type and habitat. Insect Conserv. Divers. 2015, 9, 63–73. [Google Scholar] [CrossRef]
  50. Saunders, M.E.; Luck, G.W. Pan trap catches of pollinator insects vary with habitat. Aust. J. Entomol. 2012, 52, 106–113. [Google Scholar] [CrossRef]
  51. Stephen, W.P.; Rao, S. Sampling native bees in proximity to a highly competitive food resource (Hymenoptera: Apiformes). J. Kans. Entomol. Soc. 2007, 80, 369–376. [Google Scholar] [CrossRef]
  52. Basset, Y.; Cizek, L.; Cuénoud, P.; Didham Raphael, K.; Guilhaumon, F.; Missa, O.; Novotny, V.; Ødegaard, F.; Roslin, T.; Schmidl, J.; et al. Arthropod diversity in a tropical forest. Science 2012, 338, 1481–1484. [Google Scholar] [CrossRef]
  53. Barbier, S.; Gosselin, F.; Balandier, P. Influence of tree species on understory vegetation diversity and mechanisms involved—A critical review for temperate and boreal forests. For. Ecol. Manag. 2008, 254, 1–15. [Google Scholar] [CrossRef]
  54. Ampoorter, E.; Barbaro, L.; Jactel, H.; Baeten, L.; Boberg, J.; Carnol, M.; Castagneyrol, B.; Charbonnier, Y.; Dawud, S.M.; Deconchat, M.; et al. Tree diversity is key for promoting the diversity and abundance of forest-associated taxa in Europe. Oikos 2020, 129, 133–146. [Google Scholar] [CrossRef]
  55. Li, Y.; Schmid, B.; Schuldt, A.; Li, S.; Wang, M.-Q.; Fornoff, F.; Staab, M.; Guo, P.-F.; Anttonen, P.; Chesters, D.; et al. Multitrophic arthropod diversity mediates tree diversity effects on primary productivity. Nat. Ecol. Evol. 2023, 7, 832–840. [Google Scholar] [CrossRef] [PubMed]
  56. Bruelheide, H.; Nadrowski, K.; Assmann, T.; Bauhus, J.; Both, S.; Buscot, F.; Chen, X.Y.; Ding, B.; Durka, W.; Erfmeier, A.; et al. Designing forest biodiversity experiments: General considerations illustrated by a new large experiment in subtropical China. Methods Ecol. Evol. 2014, 5, 74–89. [Google Scholar] [CrossRef]
  57. Yang, X.-F.; Bauhus, J.; Both, S.; Fang, T.; Härdtle, W.; Kröber, W.; Ma, K.-P.; Nadrowski, K.; Pei, K.-Q.; Scherer-Lorenzen, M.; et al. Establishment success in a forest biodiversity and ecosystem functioning experiment in subtropical China (BEF-China). Eur. J. For. Res. 2013, 132, 593–606. [Google Scholar] [CrossRef]
  58. McCravy, K.W. A review of sampling and monitoring methods for beneficial arthropods in agroecosystems. Insects 2018, 9, 170. [Google Scholar] [CrossRef] [PubMed]
  59. Liu, X.-W.; Chesters, D.; Dai, Q.-Y.; Niu, Z.-Q.; Beckschäfer, P.; Martin, K.; Zhu, C.-D. Integrative profiling of bee communities from habitats of tropical southern Yunnan (China). Sci. Rep. 2017, 7, 5336. [Google Scholar] [CrossRef]
  60. Schloss, P.D.; Westcott, S.L.; Ryabin, T.; Hall, J.R.; Hartmann, M.; Hollister, E.B.; Lesniewski, R.A.; Oakley, B.B.; Parks, D.H.; Robinson, C.J.; et al. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 2009, 75, 7537–7541. [Google Scholar] [CrossRef]
  61. Li, W.Z.; Godzik, A. Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 2006, 22, 1658–1659. [Google Scholar] [CrossRef] [PubMed]
  62. Zhang, J.; Kapli, P.; Pavlidis, P.; Stamatakis, A. A general species delimitation method with applications to phylogenetic placements. Bioinformatics 2013, 29, 2869–2876. [Google Scholar] [CrossRef] [PubMed]
  63. Rognes, T.; Flouri, T.; Nichols, B.; Quince, C.; Mahé, F. VSEARCH: A versatile open source tool for metagenomics. PeerJ 2016, 4, e2584. [Google Scholar] [CrossRef] [PubMed]
  64. Munch, K.; Boomsma, W.; Huelsenbeck, J.P.; Willerslev, E.; Nielsen, R. Statistical assignment of DNA sequences using Bayesian phylogenetics. Syst. Biol. 2008, 57, 750–757. [Google Scholar] [CrossRef]
  65. Ratnasingham, S.; Hebert, P.D.N. BOLD: The Barcode of Life Data System. Mol. Ecol. Notes 2007, 7, 355–364. [Google Scholar] [CrossRef] [PubMed]
  66. Lazarina, M.; Sgardelis, S.P.; Tscheulin, T.; Kallimanis, A.S.; Devalez, J.; Petanidou, T. Bee response to fire regimes in Mediterranean pine forests: The role of nesting preference, trophic specialization, and body size. Basic Appl. Ecol. 2016, 17, 308–320. [Google Scholar] [CrossRef]
  67. Potts, S.G.; Vulliamy, B.; Roberts, S.; O’Toole, C.; Dafni, A.; Ne’eman, G.; Willmer, P. Role of nesting resources in organising diverse bee communities in a Mediterranean landscape. Ecol. Entomol. 2005, 30, 78–85. [Google Scholar] [CrossRef]
  68. Greenleaf, S.S.; Williams, N.M.; Rachael, W.; Claire, K. Bee foraging ranges and their relationship to body size. Oecologia 2007, 153, 589–596. [Google Scholar] [CrossRef]
  69. Mostajeran, M.; Edriss, M.A.; Basiri, M.R. Analysis of colony and morphological characters in honey bees (Apis mellifera meda). Pak. J. Bio. Sci. 2006, 9, 2685–2688. [Google Scholar] [CrossRef]
  70. Holloway, B.A. Pollen-feeding in hover-flies (Diptera: Syrphidae). N. Z. J. Zoo. 1976, 3, 339–350. [Google Scholar] [CrossRef]
  71. Thorp, R.W. The collection of pollen by bees. Plant Syst. Evol. 2000, 222, 211–223. [Google Scholar] [CrossRef]
  72. Williams, N.M.; Crone, E.E.; T’ai, H.R.; Minckley, R.L.; Packer, L.; Potts, S.G. Ecological and life-history traits predict bee species responses to environmental disturbances. Biol. Conserv. 2010, 143, 2280–2291. [Google Scholar] [CrossRef]
  73. Munyuli, T. Influence of functional traits on foraging behaviour and pollination efficiency of wild social and solitary bees visiting coffee (Coffea canephora) flowers in Uganda. Grana 2014, 53, 69–89. [Google Scholar] [CrossRef]
  74. Xie, T.-T.; Orr, M.C.; Zhang, D.; Ferrari, R.R.; Li, Y.; Liu, X.-W.; Niu, Z.-Q.; Wang, M.-Q.; Zhou, Q.-S.; Hao, J.-S.; et al. Phylogeny-based assignment of functional traits to DNA barcodes outperforms distance-based, in a comparison of approaches. Mol. Ecol. Resour. 2023, 23, 1526–1539. [Google Scholar] [CrossRef]
  75. Chesters, D.; Ferrari, R.R.; Lin, X.-L.; Orr, M.C.; Staab, M.; Zhu, C.-D. Launching insectphylo.org; a new hub facilitating construction and use of synthesis molecular phylogenies of insects. Mol. Ecol. Resour. 2023, 23, 1556–1573. [Google Scholar] [CrossRef]
  76. Foster, Z.S.; Sharpton, T.J.; Grunwald, N.J. Metacoder: An R package for visualization and manipulation of community taxonomic diversity data. PLoS Comput. Biol. 2017, 13, e1005404. [Google Scholar] [CrossRef] [PubMed]
  77. Patil, I. Visualizations with statistical details: The ‘ggstatsplot’ approach. J. Open Source Softw. 2021, 6, 3167. [Google Scholar] [CrossRef]
  78. Benjamini, Y.; Hochberg, Y. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. Ser. B (Methodol.) 1995, 57, 289–300. [Google Scholar] [CrossRef]
  79. Bauer, D.F. Constructing confidence sets using rank statistics. J. Am. Stat. Assoc. 1972, 67, 687–690. [Google Scholar] [CrossRef]
  80. Dixon, P. VEGAN, a package of R functions for community ecology. J. Veg. Sci. 2003, 14, 927–930. [Google Scholar] [CrossRef]
  81. Kembel, S.W.; Cowan, P.D.; Helmus, M.R.; Cornwell, W.K.; Morlon, H.; Ackerly, D.D.; Blomberg, S.P.; Webb, C.O. Picante: R tools for integrating phylogenies and ecology. Bioinformatics 2010, 26, 1463–1464. [Google Scholar] [CrossRef]
  82. Laliberté, E.; Legendre, P. A distance-based framework for measuring functional diversity from multiple traits. Ecology 2010, 91, 299–305. [Google Scholar] [CrossRef]
  83. Riosmena-Rodriguez, R.; Andrade-Sorcia, G.; Robinson, N.M. Species Richness. In Encyclopedia of Estuaries; Kennish, M.J., Ed.; Springer: Dordrecht, The Netherlands, 2016; pp. 612–613. [Google Scholar]
  84. Cornwell, W.K.; Schwilk, D.W.; Ackerly, D.D. A trait-based test for habitat filtering: Convex hull volume. Ecology 2006, 87, 1465–1471. [Google Scholar] [CrossRef]
  85. Mason, N.W.H.; Mouillot, D.; Lee, W.G.; Wilson, J.B. Functional richness, functional evenness and functional divergence: The primary components of functional diversity. Oikos 2005, 111, 112–118. [Google Scholar] [CrossRef]
  86. Villeger, S.; Mason, N.W.; Mouillot, D. New multidimensional functional diversity indices for a multifaceted framework in functional ecology. Ecology 2008, 89, 2290–2301. [Google Scholar] [CrossRef]
  87. Paradis, E.; Schliep, K. ape 5.0: An environment for modern phylogenetics and evolutionary analyses in R. Bioinformatics 2019, 35, 526–528. [Google Scholar] [CrossRef]
  88. Gower, J.C. A general coefficient of similarity and some of its properties. Biometrics 1971, 27, 857–871. [Google Scholar] [CrossRef]
  89. Chao, A.; Henderson, P.A.; Chiu, C.H.; Moyes, F.; Hu, K.H.; Dornelas, M.; Magurran, A.E. Measuring temporal change in alpha diversity: A framework integrating taxonomic, phylogenetic and functional diversity and the iNEXT.3D standardization. Methods Ecol. Evol. 2021, 12, 1926–1940. [Google Scholar] [CrossRef]
  90. Jones Eugene, C.; Buchmann, S.L. Ultraviolet floral patterns as functional orientation cues in hymenopterous pollination systems. Anim. Behav. 1974, 22, 481–485. [Google Scholar] [CrossRef]
  91. Kevan, P.G. Vegetation and floral colors revealed by ultraviolet light: Interpretational difficulties for functional significance. Am. J. Bot. 1979, 66, 749–751. [Google Scholar] [CrossRef]
  92. Peitsch, D.; Fietz, A.; Hertel, H.; de Souza, J.; Ventura, D.F.; Menzel, R. The spectral input systems of hymenopteran insects and their receptor-based colour vision. J. Comp. Physiol. A 1992, 170, 23–40. [Google Scholar] [CrossRef] [PubMed]
  93. Hall, M. Blue and yellow vane traps differ in their sampling effectiveness for wild bees in both open and wooded habitats. Agric. For. Entomol. 2018, 20, 487–495. [Google Scholar] [CrossRef]
  94. Ricklefs, R.E.; Marquis, R.J. Species richness and niche space for temperate and tropical folivores. Oecologia 2012, 168, 213–220. [Google Scholar] [CrossRef] [PubMed]
  95. De Frenne, P.; Zellweger, F.; Rodríguez-Sánchez, F.; Scheffers, B.R.; Hylander, K.; Luoto, M.; Vellend, M.; Verheyen, K.; Lenoir, J. Global buffering of temperatures under forest canopies. Nat. Ecol. Evol. 2019, 3, 744–749. [Google Scholar] [CrossRef]
  96. Gibbs, J.; Rehan, S.M.; Richards, M.H.; Rutgers-Kelly, A.; Sheffield, C.S.; Vickruck, J.L. Bee diversity in naturalizing patches of Carolinian grasslands in southern Ontario, Canada. Can. Entomol. 2011, 143, 279–299. [Google Scholar] [CrossRef]
  97. Gibbs, J.; Joshi, N.K.; Wilson, J.K.; Rothwell, N.L.; Powers, K.; Haas, M.; Gut, L.; Biddinger, D.J.; Isaacs, R. Does passive sampling accurately reflect the bee (Apoidea: Anthophila) communities pollinating apple and sour cherry orchards? Environ. Entomol. 2017, 46, 579–588. [Google Scholar] [CrossRef]
  98. Giles, V.M.E.; Ascher, J.S. A survey of the bees of the black rock forest preserve, New York. J. Hymenopt. Res. 2006, 15, 208–231. [Google Scholar]
  99. Hudson, J.; Horn, S.; Hanula, J.L. Assessing the efficiency of pan traps for collecting Bees (Hymenoptera: Apoidea). J. Entomol. Sci. 2020, 55, 321–328. [Google Scholar] [CrossRef]
Figure 1. Pairwise comparisons of bee species richness and composition among (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests. The grey trees of the lower left of each subplot show the complete taxonomy. Smaller trees depict taxonomic differences between trap types. Branches in brown denote higher species richness of those of the column, and green indicate higher species richness across trap types shown on rows. The node colors represent the difference among compared trap types evaluated by log2 ratio of median proportions and the node size represents the number of bee species at each taxonomic level. Abbreviations: PB, blue pan trap; PW, white pan trap; PY, yellow pan trap; and BV, blue vane trap.
Figure 1. Pairwise comparisons of bee species richness and composition among (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests. The grey trees of the lower left of each subplot show the complete taxonomy. Smaller trees depict taxonomic differences between trap types. Branches in brown denote higher species richness of those of the column, and green indicate higher species richness across trap types shown on rows. The node colors represent the difference among compared trap types evaluated by log2 ratio of median proportions and the node size represents the number of bee species at each taxonomic level. Abbreviations: PB, blue pan trap; PW, white pan trap; PY, yellow pan trap; and BV, blue vane trap.
Insects 15 00909 g001
Figure 2. Comparisons of inter-tegular distance (ITD) of bees across four trap types in (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests. Circles indicate outliers. Letters represent statistical differences according to one-tailed pairwise Wilcoxon test for non-parametric data, with groupings denoted by shared letters (p > 0.05). p values were adjusted by the Benjamini–Hochberg (BH) method. Abbreviations: PB, blue pan trap; PW, white pan trap; PY, yellow pan trap; and BV, blue vane trap.
Figure 2. Comparisons of inter-tegular distance (ITD) of bees across four trap types in (a) all forests (monoculture and mixed plots), (b) monoculture forests, and (c) mixed forests. Circles indicate outliers. Letters represent statistical differences according to one-tailed pairwise Wilcoxon test for non-parametric data, with groupings denoted by shared letters (p > 0.05). p values were adjusted by the Benjamini–Hochberg (BH) method. Abbreviations: PB, blue pan trap; PW, white pan trap; PY, yellow pan trap; and BV, blue vane trap.
Insects 15 00909 g002
Table 1. Comparisons of three facets of bee diversity in all forests obtained from one-tailed pairwise Wilcoxon test.
Table 1. Comparisons of three facets of bee diversity in all forests obtained from one-tailed pairwise Wilcoxon test.
Group1Group2Counts1Counts2StatisticCounts1Counts2StatisticCounts1Counts2Statistic
TaxonomicPhylogeneticFunctional
PBBV1621626592.50  **1621627480.00  **10592498.00
PBPY1621627756.00  **1621629484.00  **1051101726.00  **
PBPW1621628752.50  **1621629067.00  **1051001372.00 **
BVPB1621621922.501621624301.00921051155.00  **
BVPY1621624567.50  *1621626840.50  **92110977.00  **
BVPW1621625606.00  **1621626508.00  **92100677.00  **
PYPB162162890.001621621542.00110105620.00
PYBV1621622813.501621623170.5011092248.00
PYPW1621624092.00  **1621624141.00110100455.00
PWPB162162427.501621621664.00100105281.00
PWBV1621621654.001621622672.0010092226.00
PWPY1621621794.001621623240.00100110406.00
Significant difference is indicated in bold; ** denotes p < 0.01; * denotes p < 0.05.
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content.

Share and Cite

MDPI and ACS Style

Xie, T.-T.; Wang, M.-Q.; Li, Y.; Su, C.-Y.; Zhang, D.; Zhou, Q.-S.; Niu, Z.-Q.; Yuan, F.; Liu, X.-W.; Ma, K.-P.; et al. Blue Vane and Pan Traps Are More Effective for Profiling Multiple Facets of Bee Diversity in Subtropical Forests. Insects 2024, 15, 909. https://doi.org/10.3390/insects15110909

AMA Style

Xie T-T, Wang M-Q, Li Y, Su C-Y, Zhang D, Zhou Q-S, Niu Z-Q, Yuan F, Liu X-W, Ma K-P, et al. Blue Vane and Pan Traps Are More Effective for Profiling Multiple Facets of Bee Diversity in Subtropical Forests. Insects. 2024; 15(11):909. https://doi.org/10.3390/insects15110909

Chicago/Turabian Style

Xie, Ting-Ting, Ming-Qiang Wang, Yi Li, Cheng-Yong Su, Dan Zhang, Qing-Song Zhou, Ze-Qing Niu, Feng Yuan, Xiu-Wei Liu, Ke-Ping Ma, and et al. 2024. "Blue Vane and Pan Traps Are More Effective for Profiling Multiple Facets of Bee Diversity in Subtropical Forests" Insects 15, no. 11: 909. https://doi.org/10.3390/insects15110909

APA Style

Xie, T. -T., Wang, M. -Q., Li, Y., Su, C. -Y., Zhang, D., Zhou, Q. -S., Niu, Z. -Q., Yuan, F., Liu, X. -W., Ma, K. -P., Zhu, C. -D., Hao, J. -S., & Chesters, D. (2024). Blue Vane and Pan Traps Are More Effective for Profiling Multiple Facets of Bee Diversity in Subtropical Forests. Insects, 15(11), 909. https://doi.org/10.3390/insects15110909

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop