Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea
Abstract
:1. Introduction
2. Materials and Methods
2.1. Ethical Approval
2.2. Tick Collection
2.3. DNA Extraction and PCR Detection
2.4. Sequencing and Phylogenetic Analyses
2.5. Statistical Analysis
3. Results
3.1. Prevalence of Ticks by the Verified Species
3.2. Incidence of Anaplasma Genes from Tick Pools
3.3. Molecular and Phylogenetic Analyses
4. Discussion
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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Region | GPS Coordinates | |
---|---|---|
Gyeongbuk (GB) | Bonghwa (BH) | 36°53′35.55″ N 128°38′44.47″ E |
Chilgok (CG) | 36°00′58.62″ N 128°29′09.54″ E | |
Gumi (GM) | 36°19′41.85″ N 128°16′32.10″ E | |
Uiseong (US) | 36°25′57.05″ N 128°44′44.82″ E | |
Yeongcheon (YC) | 35°50′44.46″ N 128°59′02.38″ E | |
Yeongdeok (YD) | 36°20′16.97″ N 129°21′57.81″ E | |
Gyeongnam (GN) | Geochang (GC) | 35°47′35.23″ N 127°57′50.43″ E |
Goseong (GS) | 35°00′04.13″ N 128°16′17.48″ E | |
Goseong (GS) | 35°00′06.78″ N 128°15′17.83″ E | |
Haman (HA) | 35°20′13.90″ N 128°34′06.50″ E | |
Ulsan Metropolitan City (UMC) | 35°30′51.46″ N 129°10′03.78″ E | |
35°32′18.93″ N 129°10′18.64″ E |
Species | Stage | No. of Ticks Collected by Region 1 | Total | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
GB | GN | UMC | ||||||||||
BH | CG | GM | US | YC | YD | GC | GS | HA | ||||
Haemaphysalis sp. | Larva | 100 | 112 | 120 | 150 | 60 | 40 | 150 | 154 | 90 | 200 | 1176 |
Haemaphysalis longicornis | Nymph | 201 | 234 | 181 | 170 | 145 | 150 | 130 | 510 | 371 | 258 | 2350 |
Adult (M) 2 | 3 | 2 | 1 | 3 | 1 | 1 | 1 | 7 | 3 | 1 | 23 | |
Adult (F) 2 | 2 | 1 | 2 | 3 | 1 | 2 | 3 | 7 | 7 | 4 | 32 | |
Subtotal | 206 | 237 | 184 | 176 | 147 | 153 | 134 | 524 | 381 | 263 | 2405 | |
Haemaphysalis flava | Nymph | 44 | 8 | 7 | 8 | 8 | 8 | 0 | 89 | 24 | 2 | 198 |
Adult (M) | 1 | 1 | 4 | 0 | 5 | 1 | 0 | 1 | 5 | 0 | 18 | |
Adult (F) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | |
Subtotal | 46 | 9 | 11 | 8 | 13 | 9 | 0 | 90 | 29 | 2 | 217 | |
Ixodes nipponensis | Larva | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nymph | 0 | 2 | 3 | 3 | 1 | 0 | 0 | 0 | 2 | 0 | 11 | |
Adult (M) | 0 | 3 | 3 | 0 | 2 | 0 | 0 | 0 | 3 | 0 | 11 | |
Adult (F) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
Subtotal | 0 | 5 | 6 | 3 | 3 | 0 | 0 | 0 | 5 | 0 | 22 | |
Amblyomma testudinarium | Larva | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nymph | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 4 | |
Adult (M) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
Adult (F) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | |
Subtotal | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 5 | |
Total | 352 | 363 | 321 | 337 | 223 | 202 | 284 | 773 | 505 | 465 | 3825 |
Species | Stage | Tested Tick (Pool) 2 | No. Positive Tick Pool/Tick Pool Tested in a Region 1 | Total | MIR 3 | p-Value 4 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GB | GN | UMC | |||||||||||||
BH | CG | GM | US | YC | YD | GC | GS | HA | |||||||
Haemaphysalis sp. | Larva | 1176 (31) | 0/3 | 1/3 | 1/3 | 0/3 | 0/2 | 0/2 | 2/4 | 2/4 | 0/2 | 2/5 | 8/31 | 0.7 | <0.0001 |
Haemaphysalis longicornis | Nymph | 2350 (239) | 0/21 | 2/24 | 0/19 | 2/17 | 0/15 | 1/15 | 0/13 | 1/51 | 1/38 | 3/26 | 10/239 | 0.4 | |
Adult (M) 5 | 23 (23) | 0/3 | 0/2 | 0/1 | 0/3 | 0/1 | 0/1 | 0/1 | 0/7 | 0/3 | 0/1 | 0/23 | 0 | ||
Adult (F) 5 | 32 (32) | 0/2 | 0/1 | 1/2 | 0/3 | 0/1 | 0/2 | 0/3 | 1/7 | 1/7 | 0/4 | 3/32 | 9.4 | ||
Subtotal | 2405 (294) | 0/26 | 2/27 | 1/22 | 2/23 | 0/17 | 1/18 | 0/17 | 2/65 | 2/48 | 3/31 | 13/294 | 0.5 | ||
Haemaphysalis flava | Nymph | 198 (28) | 0/5 | 0/2 | 0/3 | 0/1 | 0/2 | 0/1 | 0 | 0/10 | 0/3 | 0/1 | 0/28 | 0 | |
Adult (M) | 18 (18) | 0/1 | 0/1 | 0/4 | 0 | 0/5 | 0/1 | 0 | 0/1 | 0/5 | 0 | 0/18 | 0 | ||
Adult (F) | 1 (1) | 0/1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0/1 | 0 | ||
Subtotal | 217 (47) | 0/7 | 0/3 | 0/7 | 0/1 | 0/7 | 0/2 | 0 | 0/11 | 0/8 | 0/1 | 0/47 | 0 | ||
Ixodes nipponensis | Larva | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
Nymph | 11 (9) | 0 | 0/2 | 2/2 | 0/3 | 0/1 | 0 | 0 | 0 | 1/1 | 0 | 3/9 | 27.3 | ||
Adult (M) | 11 (11) | 0 | 1/3 | 0/3 | 0 | 0/2 | 0 | 0 | 0 | 2/3 | 0 | 3/11 | 27.3 | ||
Adult (F) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
Subtotal | 22 (20) | 0 | 1/5 | 2/5 | 0/3 | 0/3 | 0 | 0 | 0 | 3/4 | 0 | 6/20 | 27.3 | ||
Amblyomma testudinarium | Larva | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||
Nymph | 4 (2) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0/2 | 0 | 0 | 0/2 | 0 | ||
Adult (M) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
Adult (F) | 1 (1) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0/1 | 0 | 0 | 0/1 | 0 | ||
Subtotal | 5 (3) | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0/3 | 0 | 0 | 0/3 | 0 | ||
Total | 3825 (395) | 0/36 | 4/38 | 4/37 | 2/30 | 0/29 | 1/22 | 2/21 | 4/83 | 5/62 | 5/37 | 27/395 | 0.7 |
Species | No. of Positive Tick Pool/MIR 2 | |||
---|---|---|---|---|
Larva | Nymph | Adult | Total | |
(n = 1176) | (n = 2563) | (n = 86) | (n = 3825) | |
Anaplasma phagocytophilum | 7/0.6 | 12/0.5 | 4/4.7 | 23/0.6 |
APL 1 clade B | 1/0.1 | 1/0.1 | 0 | 2/0.1 |
Anaplasma capra | 0 | 0 | 1/1.2 | 1/0.1 |
Anaplasma bovis | 0 | 0 | 1/1.2 | 1/0.1 |
Total | 8/0.7 | 13/0.5 | 6/7.0 | 27/0.7 |
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Share and Cite
Seo, M.-G.; Lee, H.; Alkathiri, B.; Ahn, K.; Lee, S.-H.; Shin, S.; Bae, S.; Kim, K.-T.; Jang, M.; Lee, S.-K.; et al. Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea. Microorganisms 2023, 11, 820. https://doi.org/10.3390/microorganisms11040820
Seo M-G, Lee H, Alkathiri B, Ahn K, Lee S-H, Shin S, Bae S, Kim K-T, Jang M, Lee S-K, et al. Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea. Microorganisms. 2023; 11(4):820. https://doi.org/10.3390/microorganisms11040820
Chicago/Turabian StyleSeo, Min-Goo, Haeseung Lee, Badriah Alkathiri, KyuSung Ahn, Seung-Hun Lee, SungShik Shin, Seulgi Bae, Kyoo-Tae Kim, Min Jang, Sang-Kwon Lee, and et al. 2023. "Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea" Microorganisms 11, no. 4: 820. https://doi.org/10.3390/microorganisms11040820
APA StyleSeo, M. -G., Lee, H., Alkathiri, B., Ahn, K., Lee, S. -H., Shin, S., Bae, S., Kim, K. -T., Jang, M., Lee, S. -K., Cho, Y. S., Eo, K. -Y., Kwon, O. -D., & Kwak, D. (2023). Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea. Microorganisms, 11(4), 820. https://doi.org/10.3390/microorganisms11040820