Tick Species Diversity and Molecular Identification of Spotted Fever Group Rickettsiae Collected from Migratory Birds Arriving from Africa
Abstract
:1. Introduction
2. Materials and Methods
Tick Identification and Pathogen Detection
3. Results
3.1. Bird Capture and Tick Collection
3.2. Tick Identification and Pathogen Detection
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Common Name | Scientific Name | Migratory Strategy 1 | N° Infested Birds | N° Ticks |
---|---|---|---|---|
Turtle dove | Streptopelia turtur | TS | 1 | 2 |
Scops owl | Otus scops | TS | 1 | 20 |
Common kestrel | Falco tinnunculus | IP | 2 | 6 |
Golden oriole | Oriolus oriolus | TS | 3 | 5 |
Woodchat shrike | Lanius senator | TS | 4 | 4 |
Icterine warbler | Hippolais icterina | TS | 47 | 103 |
Sedge warbler | Acrocephalus schoenobaenus | TS | 8 | 52 |
Reed warbler | Acrocephalus scirpaceus | TS | 7 | 12 |
Great reed warbler | Acrocephalus arundinaceus | TS | 5 | 8 |
Bonelli’s warbler | Phylloscopus bonellii | TS | 1 | 1 |
Wood warbler | Phylloscopus sibilatrix | TS | 80 | 135 |
Willow warbler | Phylloscopus trochilus | TS | 8 | 13 |
Chiff chaff | Phylloscopus collybita | IP | 2 | 2 |
Sardinian warbler | Sylvia melanocephala | IP | 2 | 2 |
Garden warbler | Sylvia borin | TS | 7 | 38 |
Subalpine warbler | Curruca cantillans | TS | 10 | 12 |
Common whitethroat | Curruca communis | TS | 69 | 170 |
Song thrush | Turdus philomelos | IP | 6 | 14 |
Spotted flycatcher | Muscicapa striata | TS | 43 | 94 |
European robin | Erithacus rubecula | IP | 22 | 35 |
Common nightingale | Luscinia megarhynchos | TS | 12 | 29 |
Pied flycatcher | Ficedula hypoleuca | TS | 52 | 160 |
Collared flycatcher | Ficedula albicollis | TS | 3 | 12 |
Black redstart | Phoenicurus ochruros | IP | 1 | 1 |
Common redstart | Phoenicurus phoenicurus | TS | 76 | 159 |
Whinchat | Saxicola rubetra | TS | 57 | 176 |
Northern wheatear | Oenanthe oenanthe | TS | 4 | 12 |
Black-eared wheatear | Oenanthe hispanica | TS | 1 | 9 |
Tree pipit | Anthus trivialis | TS | 13 | 46 |
Yellow wagtail | Motacilla flava | TS | 1 | 6 |
Serin | Serinus serinus | IP | 2 | 2 |
Total | 550 | 1340 |
Geographic Origin | Tick Species | Larvae | Nymphs | Adults | Total | % |
---|---|---|---|---|---|---|
Sub-Saharan | Hyalomma rufipes | 391 | 804 | - | 1195 | 89.2 |
Hyalomma truncatum | 1 | 5 | - | 6 | 0.4 | |
Amblyomma marmoreum complex | 1 | 12 | - | 13 | 1.0 | |
Amblyomma variegatum | - | 1 | - | 1 | 0.1 | |
Argas africolumbae complex | 2 | - | 2 | 0.1 | ||
Argas persicus | 1 | - | 1 | 0.1 | ||
Intra-Palearctic (Mediterranean) | Ixodes ricinus | 3 | 9 | - | 12 | 0.9 |
Ixodes frontalis | 18 | 18 | 5 | 41 | 3.1 | |
Ixodes ventalloi | 7 | 14 | 1 | 22 | 1.6 | |
Ixodes inopinatus | - | 2 | - | 2 | 0.1 | |
Hyalomma marginatum | - | 14 | - | 14 | 1.0 | |
Undefined 1 | Hyalomma sp. | 11 | 19 | - | 30 | 2.2 |
Ixodes sp. | - | 1 | - | 1 | 0.1 | |
Total | 435 | 899 | 6 | 1340 | 100 |
Bird Species | Tick Species | Sequenced Targets | |||||||
---|---|---|---|---|---|---|---|---|---|
OmpA | gltA | ||||||||
Description | Query Cover | Perc. Id. | Ref. | Description | Query Cover | Perc. Id. | Ref. | ||
Sylvia borin | Ixodes ricinus | Rickettsia monacensis | 100% | 99% | LN794217.1 | Rickettsia monacensis | 99% | 100% | KU586332.1 |
Erithacus rubecula | Ixodes frontalis | - | - | - | - | Rickettsia helvetica | 97% | 99.2% | KU310588. |
Sylvia communis | Ixodes ventalloi | - | - | - | - | Rickettsia helvetica | 100% | 100.% | KU310588.1 |
Erithacus rubecula | Ixodes ventalloi | - | - | - | - | Rickettsia monacensis | 100% | 99.7% | KU586332.1 |
Erithacus rubecula | Ixodes ventalloi | Rickettsia sp. | 100% | 95.6% | LC565679.1 | uncultured Rickettsia sp. | 99% | 99.7% | KY753120.1 |
Lanius senator | Hyalomma rufipes | - | - | - | - | Rickettsia felis | 99% | 100% | MG952932.1 |
Saxicola rubetra | Hyalomma rufipes | Rickettsia felis isolate LIS 552A (ompA) gene | 100% | 100% | KY172885.1 | Rickettsia felis | 99% | 100% | MG952932.1 |
Luscinia megarhynchos | Ixodes ricinus | Rickettsia monacensis | 100% | 99.8% | HM161773.1 | Rickettsia monacensis | 100% | 100% | KU586332.1 |
Sylvia communis | Ixodes inopinatus | Rickettsia monacensis | 99% | 99.1% | LN794217.1 | Rickettsia monacensis | 93% | 99.5% | KU586332.1 |
Phoenicurus phoenicurus | Hyalomma rufipes | Rickettsia africae | 100% | 100% | HQ335132.1 | Rickettsia africae | 100% | 100% | HQ335126.1 |
Luscinia megarhynchos | Ixodes ricinus | Rickettsia monacensis | 99% | 100% | HM161773.1 | Rickettsia monacensis | 100% | 100% | KU586332.1 |
Saxicola rubetra | Amblyomma variegatum | - | - | - | - | Rickettsia africae | 100% | 98.7% | MH751467.1 |
Sylvia melanocephala | Ixodes ricinus | - | - | - | - | Rickettsia monacensis | 99% | 99.7% | KU586332.1 |
Turdus philomelos | Ixodes ricinus | Rickettsia monacensis | 99% | 99.3% | MN853331.1 | Rickettsia monacensis | 100% | 99.5% | KU586332.1 |
Anthus trivialis | Amblyomma marmoreum complex | Rickettsia tamurae | 99% | 97.8% | DQ103259.1 | Rickettsia tamurae | 100% | 98.5% | KT753265.1 |
Erithacus rubecula | Ixodes ventalloi | - | - | - | - | Rickettsia helvetica | 100% | 99.2% | KU310588.1 |
Sylvia cantillans | Ixodes ricinus | - | - | - | - | Rickettsia helvetica | 99% | 100% | KU310588.1 |
Phoenicurus phoenicurus | Hyalomma rufipes | - | - | - | - | - | - | - | - |
Phylloscopus sibilatrix | Hyalomma rufipes | - | - | - | - | Rickettsia felis | 100% | 99.7% | MN726355.1 |
Phylloscopus sibilatrix | Hyalomma sp. | Rickettsia monacensis | 97% | 100% | MK922659.1 | Rickettsia monacensis | 100% | 100% | KU586332.1 |
Ficedula hypoleuca | Ixodes ricinus | Rickettsia monacensis | 100% | 99.3% | MN853331.1 | Rickettsia monacensis | 99% | 100% | KU586332.1 |
Sylvia borin | Ixodes ricinus | - | - | - | - | Rickettsia helvetica | 100% | 99.7% | KU310588.1 |
Sylvia communis | Argas persicus | - | - | - | - | Rickettsia endosymbiont of Haemaphysalis punctata | 100% | 99.7% | EU303311.1 |
- | - | - | - | uncultured Rickettsia sp. | 100% | 99.5% | MH673722.1 | ||
- | - | - | - | Rickettsia asembonensis | 100% | 98.5% | KY445723.1 | ||
Sylvia communis | Ixodes sp. | - | - | - | - | Rickettsia helvetica | 100% | 100% | KU310588.1 |
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Mancuso, E.; Di Domenico, M.; Di Gialleonardo, L.; Menegon, M.; Toma, L.; Di Luca, M.; Casale, F.; Di Donato, G.; D’Onofrio, L.; De Rosa, A.; et al. Tick Species Diversity and Molecular Identification of Spotted Fever Group Rickettsiae Collected from Migratory Birds Arriving from Africa. Microorganisms 2023, 11, 2036. https://doi.org/10.3390/microorganisms11082036
Mancuso E, Di Domenico M, Di Gialleonardo L, Menegon M, Toma L, Di Luca M, Casale F, Di Donato G, D’Onofrio L, De Rosa A, et al. Tick Species Diversity and Molecular Identification of Spotted Fever Group Rickettsiae Collected from Migratory Birds Arriving from Africa. Microorganisms. 2023; 11(8):2036. https://doi.org/10.3390/microorganisms11082036
Chicago/Turabian StyleMancuso, Elisa, Marco Di Domenico, Luigina Di Gialleonardo, Michela Menegon, Luciano Toma, Marco Di Luca, Francesca Casale, Guido Di Donato, Laura D’Onofrio, Angela De Rosa, and et al. 2023. "Tick Species Diversity and Molecular Identification of Spotted Fever Group Rickettsiae Collected from Migratory Birds Arriving from Africa" Microorganisms 11, no. 8: 2036. https://doi.org/10.3390/microorganisms11082036
APA StyleMancuso, E., Di Domenico, M., Di Gialleonardo, L., Menegon, M., Toma, L., Di Luca, M., Casale, F., Di Donato, G., D’Onofrio, L., De Rosa, A., Riello, S., Ferri, A., Serra, L., & Monaco, F. (2023). Tick Species Diversity and Molecular Identification of Spotted Fever Group Rickettsiae Collected from Migratory Birds Arriving from Africa. Microorganisms, 11(8), 2036. https://doi.org/10.3390/microorganisms11082036