Pathogenic Potential of Coagulase-Positive Staphylococcus Strains Isolated from Aviary Capercaillies and Free-Living Birds in Southeastern Poland
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Birds
2.2. Identification of Staphylococcus Strains
2.3. Determination of Bacterial Sensitivity to Antibiotics and Chemotherapeutics Based on Minimum Inhibitory Concentration (MIC)
2.4. Molecular Analysis
2.4.1. Genomic DNA Extraction
2.4.2. PCR for Identification of Staphylococcus Isolates and Genotypic Analysis of Virulence
2.4.3. Pulsed—Field Gel Electrophoresis (PFGE)
3. Results
3.1. Staphylococcus Strains
3.2. Susceptibility of Isolated Strains to Selected Antimicrobial Agents
Resistance of S. aureus Strains to Oxacillin
3.3. Molecular Analysis
3.3.1. Molecular Identification of Staphylococcus Isolates and Genotypic Analysis of Virulence
3.3.2. Pulsed Field Gel Electrophoresis (PFGE)
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Primer Name | Oligonucleotide Sequence (5′-3′) * | Amplicon Size (bp) | Target Gene | PCR Conditions | Reference |
---|---|---|---|---|---|
nuc-F nuc-R | GCGATTGATGGTGATACGGTT AGCCAAGCCTTGACGAACTAAAGC | 270 | nuc | 94 °C, 5 min, 37 cycles of 94 °C for 1 min, 55 °C for 30 s, 72 °C for 1 min, final extension 72 °C for 7 min | [25] |
mecA-F mecA-R | AAAATCGATGGTAAAGGTTGGC AGTTCTGGCACTACCGGATTTGC | 533 | mecA | 94 °C, 5 min, 40 cycles of 94 °C for 1 min, 58 °C for 1 min, 72 °C for 2 min, final extension 72 °C for 5 min | [26] |
mecC-F mecC-R | GAA AAA AAG GCT TAG AAC GCC TC GAA GAT CTT TTC CGT TTT CAG C | 138 | mecC | 94 °C, 15 min, 30 cycles of 94 °C for 30 s, 59 °C for 1 min, 72 °C for 1 min, final extension for 10 min | [27] |
sea-F sea-R | ACGATCAATTTTTACAGC TGCATGTTTTCAGAGTTAATC | 544 | Enterotoxins | 94 °C, 5 min, 35 cycles of 94 °C for 2 min, 57 °C for 2 min, 72 °C for 1 min, final extension 72 °C for 7 min | [28] |
seb-F seb-R | GAATGATATTAATTCGCATC TCTTTGTCGTAAGATAAACTTC | 416 | |||
sec-F sec-R | GACATAAAAGCTAGGAATTT AAATCGGATTAACATTATCCA | 257 | |||
sed-F sed-R | TTACTAGTTTGGTAATATCTCCTT CCACCATAACAATTAATGC | 334 | |||
see-F see-R | ATAGATAAAGTTAAAACAAGCAA TAACTTACCGTGGACCC | 170 | |||
seg-F seg-R | CCACCTGTTGAAGGAAGAGG TGCAGAACCATCAAACTCGT | 432 | 94 °C for 2 min, 30 cycles of 94 °C for 25 s, 50 °C for 20 s, 72 °C for 40 s, final extension 72 °C for 6 min | [29] | |
seh-F seh-R | TCACATCATATGCGAAAGCAG TCGGACAATATTTTTCTGATCTTT | 463 | |||
sei-F sei-R | CTCAAGGTGATATTGGTGTAGG CAGGCAGTCCATCTCCTGTA | 529 | |||
sej-F sej-R | GGTTTTCAATGTTCTGGTGGT AACCAACGGTTCTTTTGAGG | 306 | |||
sel-F sel-R | CACCAGAATCACACCGCTTA CTGTTTGATGCTTGCCATTG | 240 | |||
tst-F tst-R | ACCCCTGTTCCCTTATCATC TTTTCAGTATTTGTAACGCC | 326 | tsst-1 | 95 °C, 5 min, 30 cycles of 94 °C for 1 min, 55 °C for 30 s, 72 °C for 1 min, final extension at 72 °C for 5 min | [12] |
pvl-F pvl-R | ATCATTAGGTAAAATGTCTGGACATGATCCA GCATCAASTGTATTGGATAGCAAAAGC | 433 | pvl | ||
eta-F eta-R | GCAGGTGTTGATTTAGCATT AGATGTCCCTATTTTTGCTG | 93 | eta etb | ||
etb-F etb-R | ACAAGCAAAAGAATACAGCG GTTTTTGGCTGCTTCTCTTG | 226 | |||
lukS-F lukS-R | TGTAAGCAGCAGAAAATGGGG GCCCGATAGGACTTCTTACAA | 503 | lukS | 94 °C, 3 min, 35 cycles of 94 °C for 1 min, 57 °C for1 min, 72 °C for 1 min, final extension 72 °C for 7 min | [30] |
lukF-F lukF-R | CCTGTCTATGCCGCTAATCAA AGGTCATGGAAGCTATCTCGA | 572 | lukF | ||
sak-F sak-R | TGAGGTAAGTGCATCAAGTTCA CCTTTGTAATTAAGTTGAATCCAGG | 403 | sak | 94 °C, 15 min, 35 cycles of 94 °C for 30 s, 55 °C for 30 s, 72 °C for 2 min | [31] |
hla-F hla-R | CTGATTACTATCCAAGAAATTCGATTG CTTTCCAGCCTACTTTTTTATCAGT | 209 | Haemolysins | 95 °C for 5 min, 30 cycles of 95 °C for 1 min, 58 °C for 1 min and 72 °C for 2 min, final extension of 72 °C for 10 min | [32] |
hlb-F hlb-R | GTGCACTTACTGACAATAGTGC GTTGATGAGTAGCTACCTTCAG | 309 | |||
hld-F hld-R | AAGAATTTTTATCTTAATTAAGGAAGGAGTG TTAGTGAATTTGTTCACTGTGTCGA | 111 | |||
hlg-F hlg-R | GTCAYAGAGTCCATAATGCATTTAA CACCAAATGTATAGCCTAAAGTG | 535 |
Staphylococcus Species | MALDI-TOF MS Biotyper Log (Score) | Bird Species | Organ | MIC Breakpoints μg/mL | Presence of Virulence Genes | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Penicillin | Amoxicillin | Gentamicin | Chloramphenicol | Tetracycline | Enrofloxacin | Erythromycin | Trimethoprim | Sulfamethoxazole | ||||||
S. pseudintermedius | SP1 | 2.100 | Capercaillie | Conjunctiva | ≤0.062 | ≤0.062 | ≤0.5 | ≥32 | ≤0.125 | ≤0.125 | ≤0.125 | ≥16 | ≤19 | - |
SP2 | 2.096 | Capercaillie | Joint | ≤0.062 | ≤0.062 | ≤0.5 | ≤4 | ≤0.125 | ≤0.125 | ≤0.5 | ≤0.5 | ≤38 | sec, hla, hld | |
SP3 | 2.367 | Capercaillie | Liver | ≥64 | ≥1 | ≤0.250 | ≥64 | ≥32 | ≤0.5 | ≥256 | ≤1 | ≤38 | - | |
SP4 | 2.168 | Meadow pipit | Joint | ≤0.125 | ≤0.125 | ≤0.250 | ≥32 | ≤0.250 | ≤0.125 | ≥16 | ≤0.5 | ≤38 | - | |
SP5 | 2.008 | White stork | Conjunctiva | ≥16 | ≥0.250 | ≤0.250 | ≤4 | ≤0.125 | ≤0.5 | ≤0.250 | ≤1 | ≤19 | - | |
S. aureus | SA1 | 2.205 | Capercaillie | Embryo | ≥32 | ≥64 | ≤1 | ≤4 | ≤0.125 | ≤0.125 | ≤0.5 | ≤0.5 | ≤19 | nuc, hla, hld |
SA2 | 2.260 | Common kestrel | Wound | ≤0.062 | ≤0.062 | ≤1 | ≤4 | ≤0.125 | ≤1 | ≤0.5 | ≤2 | ≤38 | nuc, seg, hla, hlb | |
SA3 | 2.249 | Song thrush | Palatal fissure | ≥8 | ≥4 | ≤1 | ≤8 | ≤0.250 | ≤0.250 | ≤0.5 | ≤0.250 | ≤19 | nuc, see, sej, sak | |
SA4 | 2.314 | Capercaillie | Conjunctiva | ≤0.062 | ≤0.062 | ≤1 | ≤4 | ≤0.250 | ≤0.125 | ≤0.5 | ≤0.5 | ≤38 | nuc, hla, hlb, hld | |
SA5 | 2.419 | Capercaillie | Embryo | ≤0.125 | ≤0.125 | ≤0.5 | ≤4 | ≤0.125 | ≤0.125 | ≤0.250 | ≤2 | ≤19 | nuc, hla, hlb | |
SA6 | 2.363 | Common kestrel | Palatal fissure | ≤0.062 | ≤0.062 | ≤0.5 | ≤8 | ≤0.250 | ≤0.125 | ≤0.5 | ≤1 | ≤19 | nuc, hla, hlb, hld | |
SA7 | 2.054 | Common buzzard | Palatal fissure | ≤0.062 | ≤0.062 | ≤1 | ≤4 | ≤0.125 | ≤0.5 | ≤0.5 | ≤2 | ≤9,5 | nuc, seg, hla, hlb | |
SA8 | 2.146 | Capercaillie | Liver | ≤0.062 | ≤0.062 | ≤0.250 | ≤4 | ≤0.5 | ≤0.125 | ≤0.5 | ≤0.5 | ≤19 | nuc, hla, hlb, hld | |
SA9 | 2.326 | Capercaillie | Embryo | ≤0.062 | ≤0.062 | ≤1 | 16 | ≥16 | ≤0.250 | ≤0.5 | ≥16 | ≤38 | nuc, hla, hlb | |
SA10 | 2.359 | Common kestrel | Liver | ≥0.5 | ≥0.5 | ≤1 | ≤4 | ≤0.5 | ≤0.125 | ≤0.5 | ≤0.5 | ≤19 | nuc, hla, hlb, hld | |
SA11 | 2.230 | Capercaillie | Palatal fissure | ≥4 | ≥2 | ≤1 | ≥256 | ≥256 | ≤0.125 | ≥256 | ≥8 | ≤38 | nuc, hlg | |
SA12 | 2.030 | Common buzzard | Spleen | ≤0.125 | ≤0.125 | ≤1 | ≤8 | ≤1 | ≤0.125 | ≤0.5 | ≤2 | ≤38 | nuc, seb, hld | |
SA13 | 2.342 | Common buzzard | Joint | ≥0.250 | ≥0.250 | ≤1 | ≤8 | ≤0.250 | ≤0.125 | ≤0.5 | ≤0.5 | ≤19 | nuc, hla, hld | |
S. delphini | SD1 | 2.028 | Capercaillie | Yolk sac | ≤0.062 | ≤0.062 | ≤0.250 | ≤4 | ≤0.125 | ≤0.125 | ≤0.5 | ≤2 | ≤38 | see, hlb, hld |
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Sulikowska, M.; Marek, A.; Jarosz, Ł.S.; Pyzik, E.; Stępień-Pyśniak, D.; Hauschild, T. Pathogenic Potential of Coagulase-Positive Staphylococcus Strains Isolated from Aviary Capercaillies and Free-Living Birds in Southeastern Poland. Animals 2024, 14, 295. https://doi.org/10.3390/ani14020295
Sulikowska M, Marek A, Jarosz ŁS, Pyzik E, Stępień-Pyśniak D, Hauschild T. Pathogenic Potential of Coagulase-Positive Staphylococcus Strains Isolated from Aviary Capercaillies and Free-Living Birds in Southeastern Poland. Animals. 2024; 14(2):295. https://doi.org/10.3390/ani14020295
Chicago/Turabian StyleSulikowska, Magdalena, Agnieszka Marek, Łukasz Sebastian Jarosz, Ewelina Pyzik, Dagmara Stępień-Pyśniak, and Tomasz Hauschild. 2024. "Pathogenic Potential of Coagulase-Positive Staphylococcus Strains Isolated from Aviary Capercaillies and Free-Living Birds in Southeastern Poland" Animals 14, no. 2: 295. https://doi.org/10.3390/ani14020295
APA StyleSulikowska, M., Marek, A., Jarosz, Ł. S., Pyzik, E., Stępień-Pyśniak, D., & Hauschild, T. (2024). Pathogenic Potential of Coagulase-Positive Staphylococcus Strains Isolated from Aviary Capercaillies and Free-Living Birds in Southeastern Poland. Animals, 14(2), 295. https://doi.org/10.3390/ani14020295