Herd-Level Risk Factors Associated with Mycoplasma bovis Serostatus in Youngstock on Irish Dairy Farms
Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Herd Recruitment
2.2. Farm Visit Schedule
2.3. Blood Sampling
2.4. Biosecurity Survey
2.5. Statistical Analysis
2.5.1. Data Cleaning
2.5.2. Data Analysis
Multivariable Logistic Regression Models
3. Results
3.1. Descriptive Statistics
3.2. Univariable Models
3.3. Multivariable Analysis
3.4. Model Performance
4. Discussion
4.1. Overview
4.2. Herd- and Animal-Level M. bovis Seroprevalence over Time
4.3. Risk Factors Associated with M. bovis Seropositivity in Replacement Heifers
4.4. Model Comparison
4.5. Study Limitations
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
References
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Questionnaire Section | Variables |
---|---|
Farmer and herd characteristics | Address, herd number, herd designator, reason for participation, calving pattern, herd size, replacement rate, farm enterprise and other stock kept on the farm, herd biosecurity status, number of land blocks managed. |
Bioexclusion practices | Use of own equipment/contractor to spread slurry, use of slurry from other herds, grazing management after slurry application. Use of footbaths, livestock transportation method, cleaning/disinfection practices for farm visitors, co-grazing of animals with other species, hygiene practices when working with animals of different ages, rodent control policy, and farm water source. Number of animals purchased and source of bought-in animals, isolation and testing policy for bought-in animals. Details of bounding farms and rivers/streams running through farms. Pets are kept on farms, and wildlife is seen on farms. |
Calving and newborn calf management | Type of calving facility used, max number of animals it can house, when cows are moved to calving pen, location of calving facilities, use of calving facilities for sick animals, cleaning and disinfection procedures of calving facilities. Navel disinfection practices, product, and timing of application. Colostrum feeding practices; source, quantity, and method of feeding; assessment of quality and storage. |
Unweaned heifer management | Type of milk fed to calves, number of feedings per day, feeding of nonsaleable milk, calf housing, sick calf housing, calf feeding equipment, cleaning/disinfection of housing facilities, weaning criteria. |
Weaned heifer management | Grazing management and parasite control strategies. |
Herd vaccination protocol (biocontainment practices) | Products used and dates of vaccination for the following: BVD 1, IBR 2, calf pneumonia, calf diarrhoea, leptospirosis, salmonellosis. |
Specific questions for source dairy farmers | Age/weight/month heifers moved to CR responsibility for breeding management, health checks performed on heifers before moving, transport of heifers to and from CR, isolation of heifers upon return from CR. |
Visit Period | Heifers (n) | Heifer Cohort Age (days) | Sampled Heifer Cohort Age (days) |
---|---|---|---|
V1 (Spring 2018) | 1065 | 41 (range 1–112) | 45 (1–103) |
V2 (Spring 2019) | 1091 | 387 (range 265–456) | 388 (304–456) |
V3 (Autumn 2019) | 1090 | 613 (range 481–694) | 613 (483–691) |
Seropositivity Criteria | ||
---|---|---|
≥1 Positive heifer | ≥3 Positive heifers | |
Visit period | Herd seroprevalence (%) (95% CI) | Herd seroprevalence (%) (95% CI) |
V1 (Spring 2018) | 50.4 (40.5–60.3) | 31.4 (22.7–41.2) |
V2 (Spring 2019) | 35.2 (26.2–45.1) | 32.4 (23.6–42.2) |
V3 (Autumn 2019) | 45.7 (36.0–55.7) | 42.9 (33.2–52.9) |
Visit Period | Herds (n = 48 CF, 57 SDF *) | Herds with at Least One M. bovis-Positive Heifer (n) | Mean (95% CI) M. bovis Seropositivity (%) |
---|---|---|---|
V1 (Spring 2018) | 105 | 53 | 38.3 (31.5–45.1) |
V2 (Spring 2019) | 105 | 37 | 81.3 (72.1–90.5) |
V3 (Autumn 2019) | 105 | 48 | 77.1 (69.0–85.2) |
Visit Period | Heifers (n) | Positive M. bovis ELISA (n) | M. bovis Seropositivity (%) (95% CI) |
---|---|---|---|
V1 (Spring 2018) | 1065 | 214 | 20.1 (17.7–22.5) |
V2 (Spring 2019) | 1091 | 319 | 29.2 (26.5–31.9) |
V3 (Autumn 2019) | 1090 | 393 | 36.1 (33.2–38.9) |
Herd M. bovis Serostatus Category | Herds (n) | |||
---|---|---|---|---|
Visit 1 | Visit 2 | Visit 3 | ≥1 Positive Heifer | ≥3 Positive Heifers |
Positive | Positive | Negative | 0 | 0 |
Negative | Positive | Negative | 0 | 0 |
Positive | Negative | Positive | 3 | 1 |
Negative | Negative | Positive | 8 | 10 |
Positive | Negative | Negative | 23 | 14 |
Negative | Positive | Positive | 10 | 16 |
Negative | Negative | Negative | 34 | 46 |
Positive | Positive | Positive | 27 | 18 |
Model ≥ 1POS: One or More ELISA Positive Heifers Indicate Herd Seropositivity | Model ≥ 3POS: Three or More ELISA Positive Heifers Indicate Herd Seropositivity | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Visit Period | Variable Name | Estimate | SE | Odds ratio (95% CI) | p value | Variable Name | Estimate | SE | Odds ratio (95% CI) | p value |
V1: Spring 1 | (n = 99 herds, 46P, 53N, 46.46% seropositivity) | (n = 99 herds, 68N, 31P, 31.3% seropositivity) | ||||||||
Number of feeds of colostrum before whole milk or milk | −0.22 | 0.11 | 0.81 (0.64, 0.99) | 0.05 | Other animals kept on the farm (Reference category: No) | 1.42 | 0.62 | 4.13 (1.24, 14.56) | 0.02 | |
Pre-weaning individual housing only (Reference category: No) | 0.85 | 0.53 | 2.33 (0.84, 6.93) | 0.11 | Pre-weaning individual housing only (Reference category: No) | 1.09 | 0.60 | 2.98 (0.92, 10.06) | 0.07 | |
Heifer calves are housed separately from bull calves (Reference category: No) | 0.95 | 0.47 | 2.60 (1.05, 6.78) | 0.04 | Herd size in 2018 | 0.005 | 0.00 | 1.0 (1.0, 1.01) | 0.12 | |
Navel disinfection carried out (Reference category: No) | 1.18 | 0.77 | 3.25 (0.79, 17.18) | 0.12 | ||||||
Number of parcels of land farmed during 2018 (Reference category: 3 or less) | 0.74 | 0.49 | 2.10 (0.82, 5.60) | 0.13 | Calves share airspace with older animals (Yes/No) | 0.76 | 0.49 | 2.13 (0.82, 5.76) | 0.12 | |
V2: Spring 2 | (n = 101 herds, 66N, 35P, 34.65% seropositivity) | (n = 99 herds, 68N, 31P, 31.3% seropositivity) | ||||||||
Feed waste milk to calves (Reference category: No) | 1.08 | 0.65 | 2.93 (0.89, 1.84) | 0.10 | Feed waste milk to calves (Reference category: No) | 1.04 | 0.68 | 2.84 (0.81, 12.33) | 0.13 | |
Number of parcels of land farmed during 2018 (Reference category: 3 or less) | 0.66 | 0.51 | 1.93 (0.71, 5.37) | 0.20 | Number of parcels of land farmed during 2018 (Reference category: 3 or less) | 1.28 | 0.52 | 3.59 (1.33, 10.22) | 0.01 | |
Purchased cattle during 2018 (Reference category: No) | 1.35 | 0.60 | 3.84 (1.27, 13.78) | 0.02 | Purchased cattle during 2018 (Reference category: No) | 1.22 | 0.62 | 3.40 (1.09, 12.60) | 0.05 | |
Use group calving pens only (Reference category: No) | 0.75 | 0.48 | 2.12 (0.84, 5.50) | 0.12 | Number of feeds of colostrum before whole milk or milk | −0.28 | 0.13 | 0.76 (0.57, 0.96) | 0.04 | |
Implemented a vaccination protocol for IBR in calves during 2018 (Reference category: No) | 0.77 | 0.47 | 2.16 (0.88, 5.48) | 0.10 | ||||||
Autumn 2 | (n = 103 herds, 60N, 43P, 46% seropositivity) | (n = 100, 60N, 40P, 40% seropositivity) | ||||||||
Calves share airspace with older animals (Reference category: No) | 0.84 | 0.47 | 2.31 (0.94, 5.97) | 0.07 | Calves share airspace with older animals (Reference category: No) | 0.94 | 0.49 | 2.56 (1.0, 1.23) | 0.05 | |
Purchased cattle during 2018 (Reference category: No) | 1.22 | 0.56 | 3.40 (1.20, 10.86) | 0.03 | Purchased cattle during 2018 (Reference category: No) | 1.31 | 0.56 | 3.69 (1.30, 11.92) | 0.02 | |
Heifer calves are housed separately from bull calves (Reference category: No) | 1.30 | 0.50 | 3.66 (1.43, 10.20) | 0.0092 | Heifer calves are housed separately from bull calves (Reference category: No) | 1.22 | 0.50 | 3.40 (1.31, 9.50) | 0.01 | |
Colostrum quality assessed (Reference category: No) | 0.90 | 0.46 | 2.44 (1.01, 6.13) | 0.05 | Colostrum from own dam only (Reference category: No) | −0.97 | 0.63 | 0.38 (0.10, 1.24) | 0.12 | |
Feed waste milk to calves (Reference category: No) | 0.83 | 0.60 | 2.30 (0.74, 7.95) | 0.16 | Number of parcels of land farmed during 2018 (Reference category: 3 or less) | 1.14 | 0.51 | 3.13 (1.17, 8.91) | 0.03 | |
Have a dedicated sick pen for calves (Reference category: No) | 0.73 | 0.52 | 2.08 (0.77, 6.02) | 0.16 |
Visit Period | Model ≥ 1POS | Model ≥ 3POS |
---|---|---|
Visit 1 (Spring 1) | 0.11 | 0.10 |
Visit 2 (Spring 2) | 0.13 | 0.31 |
Visit 3 (Autumn 2) | 0.16 | 0.16 |
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McCarthy, M.-C.; O’Grady, L.; McAloon, C.G.; Mee, J.F. Herd-Level Risk Factors Associated with Mycoplasma bovis Serostatus in Youngstock on Irish Dairy Farms. Animals 2024, 14, 3057. https://doi.org/10.3390/ani14213057
McCarthy M-C, O’Grady L, McAloon CG, Mee JF. Herd-Level Risk Factors Associated with Mycoplasma bovis Serostatus in Youngstock on Irish Dairy Farms. Animals. 2024; 14(21):3057. https://doi.org/10.3390/ani14213057
Chicago/Turabian StyleMcCarthy, Marie-Claire, Luke O’Grady, Conor G. McAloon, and John F. Mee. 2024. "Herd-Level Risk Factors Associated with Mycoplasma bovis Serostatus in Youngstock on Irish Dairy Farms" Animals 14, no. 21: 3057. https://doi.org/10.3390/ani14213057
APA StyleMcCarthy, M. -C., O’Grady, L., McAloon, C. G., & Mee, J. F. (2024). Herd-Level Risk Factors Associated with Mycoplasma bovis Serostatus in Youngstock on Irish Dairy Farms. Animals, 14(21), 3057. https://doi.org/10.3390/ani14213057