Identification of Stem Rust Resistance Genes in Triticum Wheat Cultivars and Evaluation of Their Resistance to Puccinia graminis f. sp. tritici
Abstract
:1. Introduction
2. Materials and Methods
2.1. Plant Materials and Pgt Races
2.2. Determination of Infection Types
2.3. Field Evaluation at the Adult-Plant Stage (APS)
2.4. Molecular Markers for Stem Rust Resistance Gene
3. Results
3.1. Sr genes in the Wheat Cultivars Based on Gene Postulation and Molecular Marker Analysis
3.2. Field Evaluation
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Gene | Chromosome | Marker | Sequence of Primer (5′→3′) | PCR Amplification Conditions | Size of Markers (bp) | |
---|---|---|---|---|---|---|
Temperature (°C)/Time | N. of Cycles | |||||
Sr24 | 3DL | Sr24#50 | CACCCGTGACATGCTCGTA AACAGGAAATGAGCAACGATGT | 94/3 min | 1 | 500 |
94/30 s; 57/30 s; 72/40 s | 30 | |||||
20/1 min | 1 | |||||
Sr25 | 7DL | Gb | CATCCTTGGGGACCTC CCAGCTCGCATACATCCA | 94/3 min | 1 | 191 |
94/30 s; 60/30 s; 72/40 s | 30 | |||||
20/1 min | 1 | |||||
Sr26 | 6AL | Sr26#43 | AATCGTCCACATTGGCTTCT CGCAACAAAATCATGCACTA | 94/3 min | 1 | 207 |
94/30 s; 56/30 s; 72/40 s | 30 | |||||
20/1 min | 1 | |||||
Sr31 | 1BL | SCSS30.2576 | GTCCGACAATACGAACGATT CCGACAATACGAACGCCTTG | 95/5 min | 1 | 576 |
95/1 min; 60/1 min; 72/30 s | 35 | |||||
72/10 min | 1 | |||||
Iag95 | CTCTGTGGATAGTTACTTGATCGA CCTAGAACATGCATGGCTGTTACA | 94/3 min | 1 | 1100 | ||
94/30 s; 55/60 s; 72/70 s | 30 | |||||
25/60 s | 1 | |||||
Sr32 | 2AS | csSr32#2 | CAAATGAATAGAAAAACCCGTGCT CACACACTGTTTTCCGTTGC | 94/3 min | 1 | 152 |
94/30 s; 60/60 s; 72/70 s | 30 | |||||
25/60 s | 1 | |||||
Sr38 | 2AS | VENTRIUP-LN2 | GGGGCTACTGACCAAGGCT TGCAGCTACAGCAGTATGTACACAAAA | 94/45 s | 1 | 259 |
94/45 s; 65/30 s; 72/1 min | 30 | |||||
72/7 min | 1 |
No. | Lines | Infection Types a | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Pgt 1 b | Pgt 2 | Pgt 3 | Pgt 4 | Pgt 5 | Pgt 6 | Pgt 7 | Pgt 8 | Pgt 9 | Pgt 10 | ||
1 | ISr5-Ra (Sr5) | 4 | 4 | 3 | 4 | 4 | 3 | 3 | 1 | 1 | 1 |
2 | ISr6-Ra (Sr6) | 3 | 3 | 3 | 3 | 3+ | 3 | 3+ | 3 | 3+ | 3 |
3 | ISr7b-Ra (Sr7b) | 4 | 3 | 3 | 3+ | 3 | 4 | 4 | 4 | 3 | 4 |
4 | ISr8a-Ra (Sr8a) | 4 | 3 | 3 | 4 | 1 | 4 | 3 | 3+ | 3+ | 4 |
5 | ISr9a-Ra (Sr9a) | 4 | 4 | 4 | 4 | 4 | 3+ | 4 | 3 | 3 | 4 |
6 | W2691Sr9b (Sr9b) | 4 | 4 | 4 | 4 | 4 | 3 | 3 | 3+ | 4 | 3 |
7 | ISr9d-Ra (Sr9d) | 4 | 3+ | 3 | 3 | 4 | 4 | 3+ | 4 | 4 | 3 |
8 | Vernstine (Sr9e) | 0 | ;1 | 1+ | ; | ; | 1 | 1 | 1− | ; | 1− |
9 | CnsSr9f (Sr9f) | 4 | 4 | 3 | 4 | 3 | 4 | 4 | 3+ | 4 | 3 |
10 | CnsSr9g (Sr9g) | 4 | 3+ | 3 | 3+ | 4 | 3 | 4 | 3 | 4 | 4 |
11 | W2691Sr10 (Sr10) | 2 | 3− | 3− | ; | 1 | 1 + N | 3 | 3 | 3 | 3 |
12 | Lee (Sr11) | 4 | 3+ | 1 | 4 | 4 | 0 | 3 | 4 | 4 | 3 |
13 | Bt/TcSr12 (Sr12) | 4 | 2 | 3 | 1+ | 3+ | 3 | 3− | 4 | 3− | 3 |
14 | W2691Sr13 (Sr13) | 0 | 3− | 3− | 1+ | 1 | 1+ | 3 | 3 | 3− | 3 |
15 | W2691Sr15 (Sr15) | 0 | 4 | 3− | ; | 3 | 3 | 3+ | 3+ | 4 | 3 |
16 | ISr16-Ra (Sr16) | 4 | 3+ | 3 | 3− | 3+ | 3 | 3 | 3 | 3 | 4 |
17 | Prelude/8*Mq/2*/Esp 5/8/9 (Sr17) | 1− | ; | 1 | ; | ; | 0 | ; | 3 | 3 | 4 |
18 | LcSr18R1 (Sr18) | 0 | 3− | 3 | 3+ | 3 | 1− | 3+ | 4 | 1+ | 4 |
19 | LcSr19Mq (Sr19) | 0 | 2 | 1 | 0 | 1 | 1+ | 3 | 1+ | 0 | 1 |
20 | CnS_T_mono_deri (Sr21) | 1 | 1 | 2 | 1 | 1− | 1+ | 1− | 1 | 1− | 2 |
21 | SwSr22T.B. (Sr22) | 2 | 2 | 0 | 3+ | 0 | 1+ | 0 | 1 | 3− | 0 |
22 | Exchange selection (Sr23) | 1 | 1+ | 4 | 0 | 1 | ; | ; | 1 | 3 | 3 |
23 | LcSr24Ag (Sr24) | 3 | 3+ | 3 | 4 | 3− | 3 | 3 | 3 | ;1− | 3C |
24 | LcSr25Ars (Sr25) | 0 | 3− | 0 | 3 | 0 | 1 | 4 | 3+ | 0 | 0 |
25 | Eagle (Sr26) | 0 | 1+ | 1 | 2 | 1 | 1 | 1+ | 1 | 0 | 1 |
26 | 73,214,3-1/9*LMPG (Sr27) | 3 | 1 | 4 | 0 | 1+ | 4 | 3− | 3 | 3+ | 1− |
27 | W2691Sr28 (Sr28) | 1 | 3 | 3 | 4 | 3− | 3 | 3+ | 3+ | 3+ | 4 |
28 | BtS30Wst (Sr30) | 4 | 1+ | ; | 1 | 1− | 1+ | ; | 3+ | 3 | 1 |
29 | Sr31/6*LMPG (Sr31) | 2 | 1− | 1 | ; | ; | 1 | ; | 1 | ; | 1− |
30 | CnsSr32 (Sr32) | 1+ | 1 | 3 | 4 | ; | 3− | 3+ | 3 | 1 | 3− |
31 | RL5450 (Sr33) | 0 | 2 | 2 | 0 | 1+ | 1+ | 2 | 2 | 2 | 1+ |
32 | Compair (Sr34) | 3 | 2 | ; | 4 | 1 | 1+ | 3+ | 3+ | 3− | 3+ |
33 | Mq(2)5XG2919 (Sr35) | 3 | 1− | ; | 1+ | ; | 0 | 1− | ; | 3− | 4 |
34 | CI12632/8*LMPG (Sr36) | 4 | 0 | 0 | 1 | 0 | 0 | 1 | 4 | 4 | 0 |
35 | W2691Sr37 (Sr37) | 0 | 3− | 0 | 1 | ; | 1 | 1+ | 1 | 4 | 1 |
36 | Trident (Sr38) | 1 | ;1− | ; | ; | ; | 1 | ; | ; | ; | ; |
37 | RL6082 (Sr39) | 3 | 3+ | 3 | 3− | 3 | 3− | 3− | 3 | 3− | 3 |
38 | RL6088 (Sr40) | 1 | 1+ | 2 | 0 | 0 | 1+ | 1 | 2 | 1 | 1+ |
39 | TAF 2 (Sr44) | 1 | 0 | 2 | 1 | 0 | 1+ | 0 | 2 | 2 | 1+ |
40 | Media (Srdp-2) | 4 | 1+ | 1+ | 3 | 0 | − | 1 | 1+ | 3 | 2 |
41 | CnsSrTmp (SrTmp) | 3 | 0 | 1 | ; | 1N | 0 | ; | 3N | 1− | 3− |
42 | Fed/SrTt3 (SrTt-3) | 2 | 1+ | 2 | 1+ | ; | 2 | 2 | 1+ | 1− | 1 |
43 | BTWld (SrWld) | 4 | 2 | 1+ | ; | 1 | − | 1+ | 3 | 3− | 1+ |
44 | Little club | 4 | 4 | 4 | 4 | 4 | 3+ | 4 | 4 | 3+ | 4 |
No. | Cultivar | Sr Gene | Infection Types a | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Pgt 1 b | Pgt 2 | Pgt 3 | Pgt 4 | Pgt 5 | Pgt 6 | Pgt 7 | Pgt 8 | Pgt 9 | Pgt 10 | |||
1 | Shannong 22 | Sr31 d | 1 | 1 | 0 | 1+ | 1 | 2− | 2 | 1+ | 0 | 1+ |
2 | Lunxuan 061 | Sr31 d | 1+ | 1 | 1 | 1+ | 1 | 1+ | 0 | 1+ | 1+ | 1+ |
3 | Nongda 5181 | Sr31 d | 2+ | 0 | 0 | 1 | 1 | 2 | 0 | 1+ | 0 | 1+ |
4 | Chang 6154 | Sr31 d | 1 | 0 | 0 | 1 | ; | 0 | ; | ; | 0 | − |
5 | Chang 4738 | − | 1 | ; | ; | 1 | 1 | 1 | 0 | 2 | 0 | − |
6 | Nongda 212 | − | 2 | 1 | 0 | 3 | ; | 1+ | ; | 2 | ; | 1+ |
7 | Liaochun 18 | Sr31 d | 1 | ; | 0 | 2 | 1 | 1+ | 0 | 2 | 0 | 0 |
8 | Jinuo 200 | Sr31 d | 1 | 0 | 2 | 2− | 1 | 1+ | 0 | 1+ | 0 | 0 |
9 | Henong 7106 | Sr31 d | 1− | 0 | 1+ | 1+ | 1 | 0 | 0 | 2 | 0 | 0 |
10 | Jimai 518 | Sr31 d | 1 | 1 | 2 | 1 | 1+ | 1+ | 0 | 1+ | 0 | 0 |
11 | Jimai 325 | Sr31 d | 2+ | 1 | 2 | 1 | 2− | 1+ | 0 | 1+ | 0 | 1+ |
12 | Heng 136 | Sr5 c | 3 | 3 | 3 | 3− | 3 | 4 | 3 | 1+ | 0 | 1+ |
13 | Heng 6632 | Sr31 d | 1+ | ; | 1 | 1 | 1 | 1 | 0 | 1+ | 0 | 1 |
14 | Cangmai 119 | − | 1 | ; | 1+ | 2 | 1++ | 1+ | 0 | ; | 0 | 1+ |
15 | Shannong 19 | Sr31 d | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | − |
16 | Jimai 21 | − | ; | 2 | 0 | 3 | 3− | 3 | 0 | 1− | ; | 1+ |
17 | Jimai 22 | SrTmp c | 3 | 1 | 1 | 0 | ; | 1 | 0 | 3 | 0 | 3 |
18 | Tanmai 98 | Sr31 d | 1 | 2 | 0 | 2 | 1 | 2 | ; | 1 | 0 | 1+ |
19 | Shimai 15 | Sr22 c | 2 | 2+ | 1 | 3 | 1+ | 1+ | 0 | 2 | 3− | 1+ |
20 | Henong 826 | Sr5 c | 3 | 4 | 4 | 3+ | 4 | 3+ | 3 | 1+ | 0 | 1+ |
21 | H6756 | Sr31 d | 1 | 1− | − | 1+ | 1+ | 0 | 1− | 0 | 0 | 0 |
22 | Aikang 58 | Sr31 d | 2+ | ; | 1 | ; | ; | 0 | ; | 0 | 0 | 0 |
23 | Jinan 17 | SrTmp c | 3 | 1+ | 1+ | 1 | 1 | 2 | ; | 3− | 0 | 3 |
24 | Han 617 | − | 2N | 1 | ; | 2+ | 1+ | 0 | 0 | 1 | 0 | 1− |
25 | Gaoyou 9618 | Sr31 d | 1 | 2 | 1 | 2 | 1+ | 2 | 0 | 1− | 0 | ; |
26 | Kunpeng 1 | Sr31 d | 1 | 2 | 0 | 2 | 1 | 0 | 0 | 1 | ; | 1 |
27 | Lin 4 | Sr31 d | 2+ | 1 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 |
28 | Linmai 2 | Sr31 d | 1 | 1 | 1− | 2 | 1 | 1− | 0 | 1− | 0 | 1+ |
29 | Nongda 399 | Sr31 d | 2 | 2 | 2− | 2 | + | ; | 0 | 1 | 0 | ; |
30 | Lunxuan 103 | − | 1 | 1 | 0 | 1+ | 1 | ; | 0 | ; | 0 | 1 |
31 | Kenong 1006 | Sr38 d | ; | 1+ | 0 | 2 | ; | 1 | 0 | ; | 0 | 1 |
32 | Jimai 19 | SrTmp c | 3 | 2 | 1 | ; | 1 | 1 | 1 | 3N | 0 | 3 |
33 | Han 5316 | Sr19 c | 1 | 1 | ; | 2 | 1 | ; | 3 | ; | 0 | 1+ |
34 | Shunmai 1718 | Sr5 c | 4 | 3 | 3 | 3+ | 3+ | 3− | 3− | 1+ | ; | 1+ |
35 | Yunhan 618 | Sr5 c | 3+ | 3 | 3 | 4 | 3+ | 3 | 3 | 1+ | 2 | 1 |
36 | Jimai 738 strong gluten | − | 1+ | 2 | 0 | 2 | 3− | 3 | ; | 2 | 0 | 1+ |
37 | Jishi 02-1 strong gluten | Sr5 c | 3 | 4 | 4 | 3 | 4 | 3 | 3− | 2 | ; | 0 |
38 | Yingzao 2018 strong gluten | − | ; | 2− | ; | 2 | ; | ; | ; | 2 | 0 | 1+ |
39 | Ke 2009 strong gluten | − | 2 | 2 | 0 | 3+ | 1+ | 1− | 0 | 3 | 0 | 1+ |
40 | Shiyou 20 strong gluten | Sr30 d | 4 | 2 | 0 | 2 | 1+ | 1+ | 0 | 3 | 3− | 1+ |
41 | Heng S29 | Sr31 d | 2+ | ; | 0 | 0 | ; | ; | 0 | 1 | 0 | 1+ |
42 | Kenong 2011 | Sr31 d | 2+ | ; | 2− | 1 | 1+ | 1 | 1+ | 1+ | 0 | 1 |
43 | Xingmai 27 | Sr31 d | 1 | 2 | 1 | 1− | 1+ | 1 | 0 | 2 | 0 | 0 |
44 | Shannong 28 | SrTmp c | 3 | 1 | 2 | 1 | ; | 1 | 0 | 3 | 0 | 3 |
45 | Jimai 120 | Sr31 d | 1 | 2 | 0 | 1− | 1+ | 1 | 0 | 1+ | ; | 1 |
46 | Little club | − | 4 | 4 | 4 | 4 | 4 | 3+ | 4 | 4 | 3+ | 4 |
No. | Cultivar | Pedigree | 34MRGQM | 21C3CTHTM | ||
---|---|---|---|---|---|---|
2021 | 2022 | 2021 | 2022 | |||
1 | Shannong 22 | Ta1 (Ms2) wheat recurrent selection population | 5 R | 5 R | 0 R | 5 R |
2 | Lunxuan 061 | Recurrent quality populations of dwarf male-sterile wheat | 0 R | 5 R | 0 R | 0 R |
3 | Nongda 5181 | Nongda 3097/Lunxuan 987 | 0 R | 5 R | 0 R | 0 R |
4 | Chang 6154 | Jinmai 63/Yun 8337-17-5-2-1 | 5 R | 5 R | 0 R | 10 R |
5 | Chang 4738 | 82230-6/94-5383 | 0 R | 0 R | 0 R | 0 R |
6 | Nongda 212 | Nongda 3338/S180 | 0 R | 5 R | 10 R | 10 R |
7 | Liaochun 18 | Liaochun 10 mutants | 5 R | 5 R | 0 R | 0 R |
8 | Jinuo 200 | 03 Nuo F3-1186/Lankao 906 | 30 R | 5 R | 0 R | 0 R |
9 | Henong 7106 | Henong 9923/Henong 4631 | 5 R | 5 R | 0 R | 0 R |
10 | Jimai 518 | Taigu Male-sterile populations | 20 R | 10 R | 5 R | 0 R |
11 | Jimai 325 | Ji 5157/Shi 02-7221 | 20 R | 5 R | 20 R | 5 R |
12 | Heng 136 | Heng 4119/Shijiazhuang 1 | 40 MS | 50 S | 5 R | 0 R |
13 | Heng 6632 | Black wheat/Heng 8116 | 5 R | 10 R | 0 R | 0 R |
14 | Cangmai 119 | 8341699/CA8694 | 90 S | 80 S | 90 S | 90 S |
15 | Shannong 19 | (83(3)-113/1604) F3//886059 | 30 R | 5 R | 30 R | 5 R |
16 | Jimai 21 | 865186/Chuannongda 84-1109//Ji 84-5481 | 30 MS | 40 MS | 10 R | 30 R |
17 | Jimai 22 | 935024/935106 | 5 R | 5 R | 20 MS | 60 S |
18 | Tanmai 98 | Jining 13/942 | 5 R | 5 R | 0 R | 0 R |
19 | Shimai 15 | (GS Jimai 38/92R137)/GS Jimai 38 | 30 R | 5 R | 30 R | 20 R |
20 | Henong 826 | Shi 6365/95 Guan 26 | 60 S | 50 MS | 10 R | 5 R |
21 | H6756 | Laizhou 953/9024-85/Ji 87-5108 | 0 R | 5 R | 0 R | 5 R |
22 | Aikang 58 | Zhoumai 11//Wenmai 6/Zhengzhou 8960 | 40 R | 0 R | 0 R | 10 MR |
23 | Jinan 17 | Linfen 5064/Lumai 13 | 20 R | 5 R | 80 S | 60 S |
24 | Han 6172 | Han 4032/Zhongyin 1 | 10 R | 20 R | 5 R | 10 R |
25 | Gaoyou 9618 | 8515-4/8901-11-14 | 50 R | 40 R | 10 R | 20 MR |
26 | Kunpeng 1 | 9411 (8901/Annong 8455)/9502 (8903/Xiaobing 33) | 60 R | 50 R | 50 R | 60 R |
27 | Lin 4 | Lumai 23/Lin 9015 | 5 R | 5 R | 0 R | 0 R |
28 | Linmai 2 | Lumai 23/Lin 90-15 | 0 R | 0 R | 0 R | 0 R |
29 | Nongda 399 | Torino/Henong 2552/Nongda 9516//Shi 4185 | 30 MR | 20 MR | 0 R | 5 R |
30 | Lunxuan 103 | Shimai 12/Shijiazhuang 8 | 5 R | 5 R | 10 R | 5 R |
31 | Kenong 1006 | Kn 9204//Kn 9204/Gaomai 5///9204R | 0 R | 0 R | 0 R | 0 R |
32 | Jimai 19 | Lumai 13/Linfen5064 | 0 R | 0 R | 20 MS | 40 MS |
33 | Han 5316 | (Han 7808/CA8059) F4//85 Zhong47 | 20 R | 5 R | 5 R | 5 R |
34 | Shunmai 1718 | 32S/Gabo | 30 MS | 30 MS | 20 R | 10 R |
35 | Yunhan 618 | Yunhan 92-18/Xinchun 9 | 40 MS | 40 MS | 10 R | 10 R |
36 | Jimai 738 strong gluten | Gao 9618/Liangxing 99 | 100 S | 90 S | 10 R | 5 R |
37 | Jishi 02-1 strong gluten | - | 80 MS | 50 MS | 20 R | 30 R |
38 | Yingzao 2018 strong gluten | - | 30 R | 20 R | 20 R | 5 R |
39 | Ke 2009 strong gluten | - | 20 R | 5 R | 10 R | 10 R |
40 | Shiyou 20 strong gluten | Ji 935-352/Jinan 17 | 10 R | 5 R | 5 R | 5 R |
41 | Heng S29 | Heng 98-5229 systematic breeding | 5 R | 5 R | 10 R | 5 R |
42 | Kenong 2011 | Kn 9204/Pubing material PZW-9 | 30 R | 20 R | 10 R | 10 R |
43 | Xingmai 27 | - | 10 R | 10 R | 10 R | 5 R |
44 | Shannong 28 | Jimai 22/6125 | 5 R | 5 R | 10 MS | 20 MS |
45 | Jimai 120 | ISENGRAIN/Shi 20-6091 | 60 R | 50 R | 20 R | 40 R |
46 | Little club | - | 90 S | 80 S | 90 S | 90 S |
Races | Immune | Resistance—Moderately Resistant | Moderately Susceptible—Susceptible | |||
---|---|---|---|---|---|---|
2021 | 2022 | 2021 | 2022 | 2021 | 2022 | |
34MRGQM | 8 (17.8) a | 5 (11.1) | 29 (64.4) | 32 (71.1) | 8 (17.8) | 8 (17.8) |
21C3CTHTM | 16 (35.6) | 13 (28.9) | 23 (51.1) | 26 (57.8) | 6 (13.3) | 6 (13.3) |
All races | 5 (7.7) | 3 (4.6) | 28 (43.1) | 30 (66.7) | 12 (18.5) | 12 (18.5) |
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Gao, F.; Wu, X.; Sun, H.; Wang, Z.; Chen, S.; Zou, L.; Yang, J.; Wei, Y.; Ni, X.; Sun, Q.; et al. Identification of Stem Rust Resistance Genes in Triticum Wheat Cultivars and Evaluation of Their Resistance to Puccinia graminis f. sp. tritici. Agriculture 2024, 14, 198. https://doi.org/10.3390/agriculture14020198
Gao F, Wu X, Sun H, Wang Z, Chen S, Zou L, Yang J, Wei Y, Ni X, Sun Q, et al. Identification of Stem Rust Resistance Genes in Triticum Wheat Cultivars and Evaluation of Their Resistance to Puccinia graminis f. sp. tritici. Agriculture. 2024; 14(2):198. https://doi.org/10.3390/agriculture14020198
Chicago/Turabian StyleGao, Fu, Xianxin Wu, Huiyan Sun, Ziye Wang, Si Chen, Longmei Zou, Jinjing Yang, Yifan Wei, Xinyu Ni, Qian Sun, and et al. 2024. "Identification of Stem Rust Resistance Genes in Triticum Wheat Cultivars and Evaluation of Their Resistance to Puccinia graminis f. sp. tritici" Agriculture 14, no. 2: 198. https://doi.org/10.3390/agriculture14020198
APA StyleGao, F., Wu, X., Sun, H., Wang, Z., Chen, S., Zou, L., Yang, J., Wei, Y., Ni, X., Sun, Q., & Li, T. (2024). Identification of Stem Rust Resistance Genes in Triticum Wheat Cultivars and Evaluation of Their Resistance to Puccinia graminis f. sp. tritici. Agriculture, 14(2), 198. https://doi.org/10.3390/agriculture14020198