Methicillin-Resistant S. aureus Carrying the PVL and Toxic Shock Syndrome Toxin in Healthy Dogs in Algeria
Abstract
:1. Introduction
2. Results
2.1. Prevalence of S. aureus and S. pseudintermedius Isolates
2.2. Resistance Phenotypes
2.3. Genomic Characterization of MRSA Isolates
2.4. Comparison with Algerian Clinical Isolates of Identical Sequence Types
3. Discussion
4. Materials and Methods
4.1. Study Design
4.2. Bacterial Isolation and Identification
4.3. Antimicrobial Susceptibility Testing
4.4. Pulsed-Field Gel Electrophoresis
4.5. Short-Read Illumina Sequencing and Genomic Analyses
4.6. Phylogenomic Analysis
4.7. Statistics
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Roberts, E.; Nuttall, T.J.; Gkekas, G.; Mellanby, R.J.; Fitzgerald, J.R.; Paterson, G.K. Not just in man’s best friend: A review of Staphylococcus pseudintermedius host range and human zoonosis. Res. Vet. Sci. 2024, 174, 105305. [Google Scholar] [CrossRef] [PubMed]
- Abdullahi, I.N.; Zarazaga, M.; Campaña-Burguet, A.; Eguizábal, P.; Lozano, C.; Torres, C. Nasal Staphylococcus aureus and S. pseudintermedius carriage in healthy dogs and cats: A systematic review of their antibiotic resistance, virulence and genetic lineages of zoonotic relevance. J. Appl. Microbiol. 2022, 133, 3368–3390. [Google Scholar] [CrossRef] [PubMed]
- Nocera, F.P.; De Martino, L. Methicillin-resistant Staphylococcus pseudintermedius: Epidemiological changes, antibiotic resistance, and alternative therapeutic strategies. Vet. Res. Commun. 2024, 48, 3505–3515. [Google Scholar] [CrossRef] [PubMed]
- Moses, I.B.; Esimone, C.O.; Iroha, I.R.; Rubin, J.E.; Sniatynsky, M.K.; Ribeiro, Á.C.d.S.; Santos, F.F.; Cayo da Silva, R.; Gales, A.C. Antibiotypes and high frequency of toxin genes in methicillin-resistant Staphylococcus pseudintermedius from nares of dogs and dog guardians in Nigeria. Comp. Immunol. Microbiol. Infect. Dis. 2022, 89, 101870. [Google Scholar] [CrossRef]
- Abouelkhair, M.A.; Thompson, R.; Riley, M.C.; Bemis, D.A.; Kania, S.A. Complete genome sequences of three Staphylococcus pseudintermedius strains isolated from Botswana. Genome Announc. 2018, 6, e01599–e01617. [Google Scholar] [CrossRef] [PubMed]
- Youn, J.H.; Park, Y.H.; Hang’ombe, B.; Sugimoto, C. Prevalence and characterization of Staphylococcus aureus and Staphylococcus pseudintermedius isolated from companion animals and environment in the veterinary teaching hospital in Zambia, Africa. Comp. Immunol. Microbiol. Infect. Dis. 2014, 37, 123–130. [Google Scholar] [CrossRef]
- Gharsa, H.; Ben Slama, K.; Gómez-Sanz, E.; Lozano, C.; Klibi, N.; Jouini, A.; Messadi, L.; Boudabous, A.; Torres, C. Antimicrobial resistance, virulence genes, and genetic lineages of Staphylococcus pseudintermedius in healthy dogs in tunisia. Microb. Ecol. 2013, 66, 363–368. [Google Scholar] [CrossRef]
- Lynch, S.A.; Helbig, K.J. The complex diseases of Staphylococcus pseudintermedius in canines: Where to next? Vet. Sci. 2021, 8, 11. [Google Scholar] [CrossRef]
- Moses, I.B.; Santos, F.F.; Gales, A.C. Human colonization and infection by Staphylococcus pseudintermedius: An emerging and underestimated zoonotic pathogen. Microorganisms 2023, 11, 581. [Google Scholar] [CrossRef]
- Turner, N.A.; Sharma-Kuinkel, B.K.; Maskarinec, S.A.; Eichenberger, E.M.; Shah, P.P.; Carugati, M.; Holland, T.L.; Fowler, V.G. Methicillin-resistant Staphylococcus aureus: An overview of basic and clinical research. Nat. Rev. Microbiol. 2019, 17, 203–218. [Google Scholar] [CrossRef]
- Haenni, M.; Saras, E.; Chatre, P.; Medaille, C.; Bes, M.; Madec, J.Y.; Laurent, F. A USA300 variant and other human-related methicillin-resistant Staphylococcus aureus strains infecting cats and dogs in France. J. Antimicrob. Chemother. 2012, 67, 326–329. [Google Scholar] [CrossRef] [PubMed]
- Loncaric, I.; Lepuschitz, S.; Ruppitsch, W.; Trstan, A.; Andreadis, T.; Bouchlis, N.; Marbach, H.; Schauer, B.; Szostak, M.P.; Feßler, A.T.; et al. Increased genetic diversity of methicillin-resistant Staphylococcus aureus (MRSA) isolated from companion animals. Vet. Microbiol. 2019, 235, 118–126. [Google Scholar] [CrossRef] [PubMed]
- Penna, B.; Silva, M.B.; Soares, A.E.R.; Vasconcelos, A.T.R.; Ramundo, M.S.; Ferreira, F.A.; Silva-Carvalho, M.C.; de Sousa, V.S.; Rabello, R.F.; Bandeira, P.T.; et al. Comparative genomics of MRSA strains from human and canine origins reveals similar virulence gene repertoire. Sci. Rep. 2021, 11, 4724. [Google Scholar] [CrossRef] [PubMed]
- Lozano, C.; Gharsa, H.; Ben Slama, K.; Zarazaga, M.; Torres, C. Staphylococcus aureus in animals and food: Methicillin resistance, prevalence and population structure. A review in the African continent. Microorganisms 2016, 4, 12. [Google Scholar] [CrossRef] [PubMed]
- Akkou, M.; Bouchiat, C.; Antri, K.; Bes, M.; Tristan, A.; Dauwalder, O.; Martins-Simoes, P.; Rasigade, J.P.; Etienne, J.; Vandenesch, F.; et al. New host shift from human to cows within Staphylococcus aureus involved in bovine mastitis and nasal carriage of animal’s caretakers. Vet. Microbiol. 2018, 223, 173–180. [Google Scholar] [CrossRef]
- Saidi, R.; Mimoune, N.; Baazizi, R.; Benaissa, M.H.; Khelef, D.; Kaidi, R. Antibiotic susceptibility of staphylococci isolated from bovine mastitis in Algeria. J. Adv. Vet. Anim. Res. 2019, 6, 231–235. [Google Scholar] [CrossRef]
- Titouche, Y.; Akkou, M.; Djaoui, Y.; Mechoub, D.; Fatihi, A.; Campaña-Burguet, A.; Bouchez, P.; Bouhier, L.; Houali, K.; Torres, C.; et al. Nasal carriage of Staphylococcus aureus in healthy dairy cows in Algeria: Antibiotic resistance, enterotoxin genes and biofilm formation. BMC Vet. Res. 2024, 20, 247. [Google Scholar] [CrossRef]
- Titouche, Y.; Akkou, M.; Campaña-Burguet, A.; González-Azcona, C.; Djaoui, Y.; Mechoub, D.; Fatihi, A.; Bouchez, P.; Bouhier, L.; Houali, K.; et al. Phenotypic and genotypic characterization of Staphylococcus aureus isolated from nasal samples of healthy dairy goats in Algeria. Pathogens 2024, 13, 408. [Google Scholar] [CrossRef]
- Agabou, A.; Ouchenane, Z.; Ngba Essebe, C.; Khemissi, S.; Chehboub, M.T.E.; Chehboub, I.B.; Sotto, A.; Dunyach-Remy, C.; Lavigne, J.-P. Emergence of nasal carriage of ST80 and ST152 PVL+ Staphylococcus aureus isolates from livestock in Algeria. Toxins 2017, 9, 303. [Google Scholar] [CrossRef]
- Belhout, C.; Elgroud, R.; Butaye, P. Methicillin-resistant Staphylococcus aureus (MRSA) and other methicillin-resistant staphylococci and Mammaliicoccus (MRNaS) associated with animals and food products in Arab Countries: A review. Vet. Sci. 2022, 9, 317. [Google Scholar] [CrossRef]
- Razali, K.; Kaidi, R.; Giarratana, F.; Ait-Oudhia, K. Staphylococci and zoonotic potential: Oral carriage and antibiotic susceptibility in stray dogs and cats in Algeria. J. Hell. Vet. Med. Soc. 2022, 73, 3621–3628. [Google Scholar] [CrossRef]
- Mairi, A.; Touati, A.; Pantel, A.; Zenati, K.; Martinez, A.Y.; Dunyach-Remy, C.; Sotto, A.; Lavigne, J.P. Distribution of toxinogenic methicillin-resistant and methicillin-susceptible Staphylococcus aureus from different ecological niches in Algeria. Toxins 2019, 11, 500. [Google Scholar] [CrossRef] [PubMed]
- Ferhaoui, N.; Tanaka, R.; Sekizuka, T.; Kuroda, M.; Sebaihia, M. Whole genome sequencing and pan-genome analysis of Staphylococcus/Mammaliicoccus spp. isolated from diabetic foot ulcers and contralateral healthy skin of Algerian Patients. BMC Microbiol. 2023, 23, 342. [Google Scholar] [CrossRef]
- Laceb, Z.M.; Diene, S.M.; Lalaoui, R.; Kihal, M.; Chergui, F.H.; Rolain, J.-M.; Hadjadj, L. Genetic diversity and virulence profile of methicillin and inducible clindamycin-resistant Staphylococcus aureus isolates in Western Algeria. Antibiotics 2022, 11, 971. [Google Scholar] [CrossRef]
- Namoune, R.; Djebbar, A.; Mekler, R.; McHugh, M.; Bekara, M.E.A.; Decano, A.; Holden, M.T.G.; Sebaihia, M. Whole genome sequencing and molecular epidemiology of clinical isolates of Staphylococcus aureus from Algeria. Microorganisms 2023, 11, 2047. [Google Scholar] [CrossRef] [PubMed]
- Bounar-Kechih, S.; Taha Hamdi, M.; Aggad, H.; Meguenni, N.; Cantekin, Z. Carriage methicillin-resistant Staphylococcus aureus in poultry and cattle in Northern Algeria. Vet. Med. Int. 2018, 2018, 4636121. [Google Scholar] [CrossRef]
- Cuny, C.; Layer-Nicolaou, F.; Weber, R.; Köck, R.; Witte, W. Colonization of dogs and their owners with Staphylococcus aureus and Staphylococcus pseudintermedius in households, veterinary practices, and healthcare facilities. Microorganisms 2022, 10, 677. [Google Scholar] [CrossRef]
- Zhu, F.; Zhuang, H.; Ji, S.; Xu, E.; Di, L.; Wang, Z.; Jiang, S.; Wang, H.; Sun, L.; Shen, P.; et al. Household transmission of community-associated methicillin-resistant Staphylococcus aureus. Front. Public Health 2021, 9, 658638. [Google Scholar] [CrossRef]
- Hogan, P.G.; Mork, R.L.; Boyle, M.G.; Muenks, C.E.; Morelli, J.J.; Thompson, R.M.; Sullivan, M.L.; Gehlert, S.J.; Merlo, J.R.; McKenzie, M.G.; et al. Interplay of personal, pet, and environmental colonization in households affected by community-associated methicillin-resistant Staphylococcus aureus. J. Infect. 2019, 78, 200–207. [Google Scholar] [CrossRef]
- Basset, P.; Amhis, W.; Blanc, D.S. Changing molecular epidemiology of methicillin-resistant Staphylococcus aureus in an Algerian hospital. J. Infect. Dev. Ctries. 2015, 9, 206–209. [Google Scholar] [CrossRef]
- Mairi, A.; Touati, A.; Lavigne, J.-P. Methicillin-resistant Staphylococcus aureus ST80 clone: A systematic review. Toxins 2020, 12, 119. [Google Scholar] [CrossRef] [PubMed]
- Lawal, O.U.; Ayobami, O.; Abouelfetouh, A.; Mourabit, N.; Kaba, M.; Egyir, B.; Abdulgader, S.M.; Shittu, A.O. A 6-year update on the diversity of methicillin-resistant Staphylococcus aureus clones in Africa: A systematic review. Front. Microbiol. 2022, 13, 860436. [Google Scholar] [CrossRef] [PubMed]
- Chenouf, N.S.; Mama, O.M.; Messaï, C.R.; Ruiz-Ripa, L.; Fernández-Fernández, R.; Carvalho, I.; Zitouni, A.; Hakem, A.; Torres, C. Detection of methicillin-resistant coagulase-negative staphylococci and PVL/mecA genes in cefoxitin-susceptible Staphylococcus aureus (t044/ST80) from unpasteurized milk sold in stores in Djelfa, Algeria. J. Dairy. Sci. 2021, 104, 2684–2692. [Google Scholar] [CrossRef] [PubMed]
- Zhou, W.; Jin, Y.; Liu, X.; Chen, Y.; Shen, P.; Xiao, Y. Comparison of genetic features and evolution of global and chinese strains of community-associated methicillin-resistant Staphylococcus aureus ST22. Microbiol. Spectr. 2022, 10, e02037-21. [Google Scholar] [CrossRef]
- Vincze, S.; Stamm, I.; Kopp, P.A.; Hermes, J.; Adlhoch, C.; Semmler, T.; Wieler, L.H.; Lubke-Becker, A.; Walther, B. Alarming proportions of methicillin-resistant Staphylococcus aureus (MRSA) in wound samples from companion animals, Germany 2010–2012. PLoS ONE 2014, 9, e85656. [Google Scholar] [CrossRef]
- Maes, N.; Magdalena, J.; Rottiers, S.; De Gheldre, Y.; Struelens, M.J. Evaluation of a triplex PCR assay to discriminate Staphylococcus aureus from coagulase-negative staphylococci and determine methicillin resistance from blood cultures. J. Clin. Microbiol. 2002, 40, 1514–1517. [Google Scholar] [CrossRef]
- Sasaki, T.; Tsubakishita, S.; Tanaka, Y.; Sakusabe, A.; Ohtsuka, M.; Hirotaki, S.; Kawakami, T.; Fukata, T.; Hiramatsu, K. Multiplex-PCR method for species identification of coagulase-positive staphylococci. J. Clin. Microbiol. 2010, 48, 765–769. [Google Scholar] [CrossRef]
- Garcia-Alvarez, L.; Holden, M.T.; Lindsay, H.; Webb, C.R.; Brown, D.F.; Curran, M.D.; Walpole, E.; Brooks, K.; Pickard, D.J.; Teale, C.; et al. Meticillin-resistant Staphylococcus aureus with a novel mecA homologue in human and bovine populations in the UK and Denmark: A descriptive study. Lancet Infect. Dis. 2011, 11, 595–603. [Google Scholar] [CrossRef]
S. aureus (n = 26) | S. pseudintermedius (n = 17) | p-Value | |||
---|---|---|---|---|---|
No. | % | No. | % | ||
Penicillin G | 21 | 80.8 | 5 | 29.4 | <0.05 |
Kanamycin | 6 | 23.1 | 0 | 0.0 | <0.05 |
Gentamicin | 0 | 0.0 | 0 | 0.0 | NA |
Tobramycin | 0 | 0.0 | 0 | 0.0 | NA |
Chloramphenicol | 0 | 0.0 | 0 | 0.0 | NA |
Florfenicol | 0 | 0.0 | 0 | 0.0 | NA |
Tetracycline | 9 | 34.6 | 10 | 58.8 | <0.05 |
Tigecycline | 0 | 0.0 | 0 | 0.0 | NA |
Erythromycin | 8 | 30.8 | 0 | 0.0 | <0.05 |
Spiramycin | 1 | 3.8 | 0 | 0.0 | <0.05 |
Lincomycin | 2 | 7.7 | 0 | 0.0 | <0.05 |
Fusidic acid | 2 | 7.7 | 1 | 5.9 | 0.131 |
Enrofloxacin | 1 | 3.8 | 0 | 0.0 | <0.05 |
Cefoxitin | 8 | 30.8 | ND | ND | NA |
Cefovecin | ND | ND | 0 | 0.0 | NA |
Linezolid | 0 | 0.0 | 0 | 0.0 | NA |
Strain | ST | spa-Type | Resistance Genes | SCCmec-Type | Virulence Genes | Replicon Types |
---|---|---|---|---|---|---|
64280 | 1 | t127 | blaZ, mecA, ant(6)-Ia, aph(3′)-III, erm(C), tet(K), vga(A)V | IVa(2B) | hglABC, lukDE, seh, sak, scn, aur, splA, splB | rep10, rep16, rep5a, rep7a, rep7c |
64282 | 1 | t948 | blaZ, mecA, ant(6)-Ia, aph(3′)-III, erm(C), tet(K) | IVa(2B) | hglABC, lukDE, seh, sak, scn, aur, splA, splB | rep10, rep16, rep5a, rep7a, rep7c |
64292 | 1 | t127 | blaZ, mecA, ant(6)-Ia, aph(3′)-III, erm(C), tet(K) | IVa(2B) | hglABC, lukDE, seh, sak, scn, aur, splA, splB | rep10, rep16, rep5a, rep7a, rep7c |
64295 | 80 | t639 | blaZ, mecA, ant(6)-Ia, aph(3′)-III, erm(C), tet(K), fusB | IVc(2B) | hglABC, lukDE, sak, scn, aur, splA, splB, edinB, PVL | rep10, rep20, rep21, rep7c |
64297 | 22 | t845 | blaZ, mecA | IVa(2B) | hglABC, sak, scn, aur, seg, sei, sem, sen, seo, seu, tst | rep20, rep5a |
64314 | 7118 | t223 | blaZ, mecA | IVa(2B) | hglABC, sak, scn, aur, seg, sei, sem, sen, seo, seu, tst | rep20, rep5a |
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Khermouche, F.; Heleili, N.; Merradi, M.; Hachemi, A.; Drapeau, A.; Murri, S.; Madec, J.-Y.; Haenni, M. Methicillin-Resistant S. aureus Carrying the PVL and Toxic Shock Syndrome Toxin in Healthy Dogs in Algeria. Antibiotics 2024, 13, 1090. https://doi.org/10.3390/antibiotics13111090
Khermouche F, Heleili N, Merradi M, Hachemi A, Drapeau A, Murri S, Madec J-Y, Haenni M. Methicillin-Resistant S. aureus Carrying the PVL and Toxic Shock Syndrome Toxin in Healthy Dogs in Algeria. Antibiotics. 2024; 13(11):1090. https://doi.org/10.3390/antibiotics13111090
Chicago/Turabian StyleKhermouche, Fares, Nouzha Heleili, Manel Merradi, Amina Hachemi, Antoine Drapeau, Séverine Murri, Jean-Yves Madec, and Marisa Haenni. 2024. "Methicillin-Resistant S. aureus Carrying the PVL and Toxic Shock Syndrome Toxin in Healthy Dogs in Algeria" Antibiotics 13, no. 11: 1090. https://doi.org/10.3390/antibiotics13111090
APA StyleKhermouche, F., Heleili, N., Merradi, M., Hachemi, A., Drapeau, A., Murri, S., Madec, J. -Y., & Haenni, M. (2024). Methicillin-Resistant S. aureus Carrying the PVL and Toxic Shock Syndrome Toxin in Healthy Dogs in Algeria. Antibiotics, 13(11), 1090. https://doi.org/10.3390/antibiotics13111090