molecules-logo

Journal Browser

Journal Browser

New Strategies for Drug Development

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Medicinal Chemistry".

Deadline for manuscript submissions: 31 December 2025 | Viewed by 1408

Special Issue Editor


E-Mail Website
Guest Editor
Faculty of Natural Science, University of Silesia in Katowice, Jagiellońska 28, 40-032 Katowice, Poland
Interests: biodegradation of aromatics including nonsteroidal anti-inflammatory drugs; enzymes involved in the breakdown of aromatics; immobilization of microorganisms and enzymatic proteins; microbial metabolism, kinetics, biocatalysis, protein purification and characterisation
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

The search for new medicinal substances has accompanied man since ancient times. In the era of working on a new project concerning, among others, drug safety, protection of antibiotics, patent protection of drugs, and equal access to them, attention is paid to introducing safe, effective, and high-quality medicinal products to the market. Scientific projects are concerned with developing medicines that respond to previously unmet medical needs, including those related to neurodegenerative, autoimmune, or oncological diseases. Research on new antimicrobial agents is also supported to combat resistance to antimicrobial agents. The design and synthesis of new drugs, both using classical organic synthesis and the increasingly popular biotechnology or genetic engineering, aim to support the protection of public health, prolong life, and improve its quality. The most important research direction in pharmacy is to improve the interactions between the drug and its site of action. The aim is to develop medicines with increased biological activity and limited side effects that will reach specific sites in the body.

The search for new drugs involves three strategies. The first is the synthesis of new chemical compounds dedicated to the pharmacotherapy of a specific disease; the second strategy is based on the search for new indications for medicinal substances previously used in the pharmacotherapy of other diseases; the last strategy is modifying the structure, either of existing drugs or known biologically active natural substances. In this process, biotransformation processes are increasingly used with whole microorganisms and isolated, pure enzyme preparations.

Since the first successful attempts to isolate and purify biologically active substances from plants, which were used as drugs, the discovery of the existence of relationships between the structures of chemical compounds and their biological activity and the isolation of the so-called leading structures have had an epochal significance in the development of drugs. Plants have been a valuable source of many compounds with different leading structures since ancient times. Many of these substances have been used as drugs without changing their chemical structure; the rest have been modified into their synthetic analogues.

The most critical issue in drug design is determining the structure of the so-called leading compound. This structure should exhibit properties of therapeutic value. However, the leading compound serves only as a basis for obtaining other clinically valuable substances. Three methods are used to obtain the leading structure and its analogues: biosynthesis, total synthesis, and semi-synthetic procedures. The most popular methods of searching for new compounds that can exhibit biological and pharmacological activities entail making changes within the structures of known, active molecules, replacing a fragment of one molecule with another, or designing a new structure while maintaining groups. The exchange of substituents through simple chemical transformation gently adjusts the modified drug to its target site. This is a method where you can quickly gain access to new analogues. Currently, stereoselective enzymes obtained from microorganisms are increasingly used in such processes. Bacteria and fungi are efficient sources of biocatalysts, characterized by a wide range of pathways for synthesizing bioactive molecules. Drug design, using leading structures provided by the world of microorganisms, is supported by bioinformatics analyses.

Another promising direction of research is the development of drugs based on nucleic acids (RNA and DNA). In addition, biotechnology provides tools for sequence design, gene cloning, expression and purification, and analytics, both recombinant proteins and monoclonal antibodies, as well as drug candidates based on nucleic acids, including mRNA.

This Special Issue aims to present a broad picture of the latest achievements in new drug development strategies, both through bioinformatics tools and biotechnological methods, including biotransformation processes of natural products with biological activity. Original articles are welcome, as well as reviews on research on innovative methods of obtaining new biologically active substances.

Prof. Dr. Danuta Wojcieszyńska
Guest Editor

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • drugs
  • biosynthesis
  • biotransformation
  • natural products
  • biological activity
  • bioactive compounds
  • structure–activity relationship
  • drug development

Benefits of Publishing in a Special Issue

  • Ease of navigation: Grouping papers by topic helps scholars navigate broad scope journals more efficiently.
  • Greater discoverability: Special Issues support the reach and impact of scientific research. Articles in Special Issues are more discoverable and cited more frequently.
  • Expansion of research network: Special Issues facilitate connections among authors, fostering scientific collaborations.
  • External promotion: Articles in Special Issues are often promoted through the journal's social media, increasing their visibility.
  • e-Book format: Special Issues with more than 10 articles can be published as dedicated e-books, ensuring wide and rapid dissemination.

Further information on MDPI's Special Issue polices can be found here.

Published Papers (2 papers)

Order results
Result details
Select all
Export citation of selected articles as:

Research

Jump to: Review

19 pages, 6005 KiB  
Article
Dapsone Alters Phenotypical and Functional Properties of Human Neutrophils In Vitro
by Sara Rakočević, Vanja Mališ, Ljiljana Kozić, Anđela Dubovina, Marija Drakul, Dejan Bokonjić, Miodrag Čolić and Dušan Mihajlović
Molecules 2025, 30(1), 113; https://doi.org/10.3390/molecules30010113 - 30 Dec 2024
Viewed by 568
Abstract
Dapsone is a sulfone used in treating inflammatory skin conditions. Despite its widespread dermatological use, the pharmacological actions of dapsone remain poorly understood. Here, we examined how different aspects of neutrophil functions are affected by dapsone. Peripheral blood neutrophils from healthy donors were [...] Read more.
Dapsone is a sulfone used in treating inflammatory skin conditions. Despite its widespread dermatological use, the pharmacological actions of dapsone remain poorly understood. Here, we examined how different aspects of neutrophil functions are affected by dapsone. Peripheral blood neutrophils from healthy donors were stimulated with phorbol-12-myristate-13-acetate (PMA), N-formyl-L-methionyl-L-leucyl-L-phenylalanine (fMLP), or calcium ionophore (CaI) or primed with cytokines prior to stimulation, in the presence of different concentrations of dapsone (from 10 to 50 µg/mL), followed by analyses of their survival, phenotype, and functional properties. We found that dapsone at the concentration of 50 μg/mL induced a significant neutrophil apoptotic rate during 6 h and 18 h, while other concentrations were well tolerated compared to control non-treated cells. However, dapsone significantly decreased the induced oxidative burst of neutrophils at all non-cytotoxic concentrations. Additionally, dapsone showed a dose-dependent suppression of NETosis in activated neutrophils. The production of IL-8 by dapsone-treated neutrophils was decreased under both stimulated (fMLP) and primed (TNF-α/fMLP) conditions. Moreover, dapsone inhibited the expression of CD11b/CD18, CD66, and CD89 and reversed or significantly mitigated the downregulation of CD16, CD32, CD181, CD88, and CD62L on neutrophils after priming and fMLP stimulation. In conclusion, our results indicate the complexity of dapsone actions on neutrophil functions, extending previous knowledge on the suppression of oxidative burst and IL-8 production upon neutrophils’ activation. Suppressed NETosis and modulation of marker expression associated with different neutrophil functions under inflammatory conditions are new findings, not recognized previously. Full article
(This article belongs to the Special Issue New Strategies for Drug Development)
Show Figures

Figure 1

Review

Jump to: Research

23 pages, 4856 KiB  
Review
Research Progress on the Structure and Function, Immune Escape Mechanism, Antiviral Drug Development Methods, and Clinical Use of SARS-CoV-2 Mpro
by Jiayi Ren, Zhengfu Zhang, Yi Xia, Daqun Zhao, Dingqin Li and Shujun Zhang
Molecules 2025, 30(2), 351; https://doi.org/10.3390/molecules30020351 - 16 Jan 2025
Viewed by 595
Abstract
The three-year COVID-19 pandemic ‘has’ caused a wide range of medical, social, political, and financial implications. Since the end of 2020, various mutations and variations in SARS-CoV-2 strains, along with the immune escape phenomenon, have emerged. There is an urgent need to identify [...] Read more.
The three-year COVID-19 pandemic ‘has’ caused a wide range of medical, social, political, and financial implications. Since the end of 2020, various mutations and variations in SARS-CoV-2 strains, along with the immune escape phenomenon, have emerged. There is an urgent need to identify a relatively stable target for the development of universal vaccines and drugs that can effectively combat both SARS-CoV-2 strains and their mutants. Currently, the main focus in treating SARS-CoV-2 lies in disrupting the virus’s life cycle. The main protease (Mpro) is closely associated with virus replication and maturation and plays a crucial role in the early stages of infection. Consequently, it has become an important target for the development of SARS-CoV-2-specific drugs. This review summarizes the recent research progress on the novel coronavirus’s main proteases, including the pivotal role of Mpro in the virus’s life cycle, the structure and catalytic mechanism of Mpro, the self-maturation mechanism of Mpro, the role of Mpro in virus immune escape, the current methods of developing antiviral drugs targeting Mpro, and the key drugs that have successfully entered clinical trials. The aim is to provide researchers involved in the development of antiviral drugs targeting Mpro with systematic and comprehensive information. Full article
(This article belongs to the Special Issue New Strategies for Drug Development)
Show Figures

Figure 1

Back to TopTop